ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5b13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001066593.1| Oryza sativa (japonica cultivar-group) Os07g... 190 6e-45
2dbj|AK067317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 6e-45
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 139 2e-29
4dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 139 2e-29
5dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 139 2e-29
6emb|CT834980.1| Oryza sativa (indica cultivar-group) cDNA clone:... 113 1e-21
7dbj|AK240963.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 113 1e-21
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 3e-19
9dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic D... 105 3e-19
10gb|AY022298.1| Oryza sativa microsatellite MRG4623 containing (A... 101 4e-18
11emb|CT985803.1| partial cDNA sequence from a Lambda ZAP II norma... 66 2e-07
12emb|CT982833.1| partial cDNA sequence from a Lambda ZAP II norma... 66 2e-07
13gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.051
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.051
15dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.80
16ref|NM_001062906.1| Oryza sativa (japonica cultivar-group) Os05g... 42 3.2
17gb|AC189415.1| Brassica rapa subsp. pekinensis clone KBrB061L05,... 42 3.2
18ref|NM_002372.2| Homo sapiens mannosidase, alpha, class 2A, memb... 42 3.2
19gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 42 3.2
20gb|BC031659.1| Homo sapiens mannosidase, alpha, class 2A, member... 42 3.2
21gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 3.2
22gb|AF032873.1|AF032873 Manduca sexta inebriated protein mRNA, co... 42 3.2
23gb|AC012603.7| Homo sapiens chromosome 5 clone CTC-332L22, compl... 42 3.2
24gb|AC026307.16|AC026307 Homo sapiens 12 BAC RP11-753N8 (Roswell ... 42 3.2
25dbj|AK104438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.2
26dbj|AK068658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.2
27gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8... 42 3.2
28emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in ... 42 3.2
29emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in... 42 3.2
30gb|BC111062.1| Homo sapiens cDNA clone IMAGE:5743758 42 3.2 
>ref|NM_001066593.1| Oryza sativa (japonica cultivar-group) Os07g0572400 (Os07g0572400)
           mRNA, complete cds
          Length = 978
 Score =  190 bits (96), Expect = 6e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 tcaagaagctctggattcgcgtgcattccgcgcagaagaagaagagagggatctacatcc 267
           |||||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||
Sbjct: 331 tcaagaagctctggatccgcatgcattccgcccagaggaagaagagagggatctacatcc 390

                                                                       
Query: 268 tgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcagatcctctggtcaatcctcg 327
           ||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 391 tgtacgaggacgtgaagtcgtgcccgtgcgaggacgtgcagatactctggtccatcctcg 450

                   
Query: 328 tcgagtcc 335
           ||||||||
Sbjct: 451 tcgagtcc 458



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 553 tgagccacggaaatggcgtgcat 575
           |||||||||||||||||||||||
Sbjct: 743 tgagccacggaaatggcgtgcat 765
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>dbj|AK067317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105D21, full
           insert sequence
          Length = 985

 Score =  190 bits (96), Expect = 6e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 tcaagaagctctggattcgcgtgcattccgcgcagaagaagaagagagggatctacatcc 267
           |||||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||
Sbjct: 334 tcaagaagctctggatccgcatgcattccgcccagaggaagaagagagggatctacatcc 393

                                                                       
Query: 268 tgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcagatcctctggtcaatcctcg 327
           ||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 394 tgtacgaggacgtgaagtcgtgcccgtgcgaggacgtgcagatactctggtccatcctcg 453

                   
Query: 328 tcgagtcc 335
           ||||||||
Sbjct: 454 tcgagtcc 461



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 553 tgagccacggaaatggcgtgcat 575
           |||||||||||||||||||||||
Sbjct: 746 tgagccacggaaatggcgtgcat 768
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  139 bits (70), Expect = 2e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                            
Query: 250      agagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcaga 309
                ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 23057070 agagagggatctacatcctgtacgaggacgtgaagtcgtgcccgtgcgaggacgtgcaga 23057129

                                          
Query: 310      tcctctggtcaatcctcgtcgagtcc 335
                | |||||||| |||||||||||||||
Sbjct: 23057130 tactctggtccatcctcgtcgagtcc 23057155



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 208      tcaagaagctctggattcgcgtgcattccgcgcagaagaaga 249
                |||||||||||||||| ||| |||||||||| |||| |||||
Sbjct: 23056920 tcaagaagctctggatccgcatgcattccgcccagaggaaga 23056961



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 553      tgagccacggaaatggcgtgcat 575
                |||||||||||||||||||||||
Sbjct: 23057440 tgagccacggaaatggcgtgcat 23057462



 Score = 44.1 bits (22), Expect = 0.80
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 373      ccgaccggccggtccctgccgccgtc 398
                |||||||||||||| |||||||||||
Sbjct: 21014458 ccgaccggccggtcgctgccgccgtc 21014433
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  139 bits (70), Expect = 2e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                          
Query: 250    agagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcaga 309
              ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 132284 agagagggatctacatcctgtacgaggacgtgaagtcgtgcccgtgcgaggacgtgcaga 132343

                                        
Query: 310    tcctctggtcaatcctcgtcgagtcc 335
              | |||||||| |||||||||||||||
Sbjct: 132344 tactctggtccatcctcgtcgagtcc 132369



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 208    tcaagaagctctggattcgcgtgcattccgcgcagaagaaga 249
              |||||||||||||||| ||| |||||||||| |||| |||||
Sbjct: 132134 tcaagaagctctggatccgcatgcattccgcccagaggaaga 132175



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 553    tgagccacggaaatggcgtgcat 575
              |||||||||||||||||||||||
Sbjct: 132654 tgagccacggaaatggcgtgcat 132676
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1699_E05
          Length = 170666

 Score =  139 bits (70), Expect = 2e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                        
Query: 250  agagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcaga 309
            ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 1254 agagagggatctacatcctgtacgaggacgtgaagtcgtgcccgtgcgaggacgtgcaga 1313

                                      
Query: 310  tcctctggtcaatcctcgtcgagtcc 335
            | |||||||| |||||||||||||||
Sbjct: 1314 tactctggtccatcctcgtcgagtcc 1339



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 208  tcaagaagctctggattcgcgtgcattccgcgcagaagaaga 249
            |||||||||||||||| ||| |||||||||| |||| |||||
Sbjct: 1104 tcaagaagctctggatccgcatgcattccgcccagaggaaga 1145



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 553  tgagccacggaaatggcgtgcat 575
            |||||||||||||||||||||||
Sbjct: 1624 tgagccacggaaatggcgtgcat 1646
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>emb|CT834980.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN031O13, full
           insert sequence
          Length = 613

 Score =  113 bits (57), Expect = 1e-21
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                       
Query: 246 aagaagagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtg 305
           ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 79  aagaagagagggatctacatcctgtacgacgatgtcaagtcgtgcccgtgcgaggacgtg 138

                                            
Query: 306 cagatcctctggtcaatcctcgtcgagtcccac 338
           ||  | || ||||| |||||||| |||||||||
Sbjct: 139 cacgtgctgtggtcgatcctcgtggagtcccac 171
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>dbj|AK240963.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065046B15,
           full insert sequence
          Length = 780

 Score =  113 bits (57), Expect = 1e-21
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                       
Query: 246 aagaagagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtg 305
           ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 209 aagaagagagggatctacatcctgtacgacgatgtcaagtcgtgcccgtgcgaggacgtg 268

                                            
Query: 306 cagatcctctggtcaatcctcgtcgagtcccac 338
           ||  | || ||||| |||||||| |||||||||
Sbjct: 269 cacgtgctgtggtcgatcctcgtggagtcccac 301
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  105 bits (53), Expect = 3e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                            
Query: 250      agagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcaga 309
                ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||  
Sbjct: 32941819 agagagggatctacatcctgtacgacgatgtcaagtcgtgcccgtgcgaggacgtgcacg 32941760

                                             
Query: 310      tcctctggtcaatcctcgtcgagtcccac 338
                | || ||||| |||||||| |||||||||
Sbjct: 32941759 tgctgtggtcgatcctcgtggagtcccac 32941731
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>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0010B10
          Length = 155263

 Score =  105 bits (53), Expect = 3e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 250  agagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcaga 309
            ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||  
Sbjct: 8047 agagagggatctacatcctgtacgacgatgtcaagtcgtgcccgtgcgaggacgtgcacg 7988

                                         
Query: 310  tcctctggtcaatcctcgtcgagtcccac 338
            | || ||||| |||||||| |||||||||
Sbjct: 7987 tgctgtggtcgatcctcgtggagtcccac 7959
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>gb|AY022298.1| Oryza sativa microsatellite MRG4623 containing (AAG)X11, genomic
           sequence
          Length = 233

 Score =  101 bits (51), Expect = 4e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                      
Query: 250 agagagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgtgcag 308
           ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 59  agagagggatctacatcctgtacgaggacgtgaagtcgtgcccgtgcgaggacgtgcag 1



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 208 tcaagaagctctggattcgcgtgcattccgcgcagaagaaga 249
           |||||||||||||||| ||| |||||||||| |||| |||||
Sbjct: 209 tcaagaagctctggatccgcatgcattccgcccagaggaaga 168
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>emb|CT985803.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 717

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 252 agagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgt 304
           |||||||| ||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct: 438 agagggatatacattctgtacgaggatgtcaaatcatgcccgtgtgaggacgt 386
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>emb|CT982833.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 564

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 252 agagggatctacatcctgtacgaggacgtcaagtcgtgcccgtgtgaggacgt 304
           |||||||| ||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct: 364 agagggatatacattctgtacgaggatgtcaaatcatgcccgtgtgaggacgt 312
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>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15,
              complete sequence
          Length = 137357

 Score = 48.1 bits (24), Expect = 0.051
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 373    ccgaccggccggtccctgccgccgtccg 400
              |||||||||||||| |||||||||||||
Sbjct: 106066 ccgaccggccggtcgctgccgccgtccg 106093
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.051
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 373      ccgaccggccggtccctgccgccgtccg 400
                |||||||||||||| |||||||||||||
Sbjct: 23716061 ccgaccggccggtcgctgccgccgtccg 23716088



 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 335      ccacccgccgccgacgctgcggctg 359
                ||||||||||||| |||||||||||
Sbjct: 28243988 ccacccgccgccgccgctgcggctg 28244012
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>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_A12
          Length = 152269

 Score = 44.1 bits (22), Expect = 0.80
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 373   ccgaccggccggtccctgccgccgtc 398
             |||||||||||||| |||||||||||
Sbjct: 57757 ccgaccggccggtcgctgccgccgtc 57732
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>ref|NM_001062906.1| Oryza sativa (japonica cultivar-group) Os05g0571100 (Os05g0571100)
           mRNA, complete cds
          Length = 1921

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 335 ccacccgccgccgacgctgcggctg 359
           ||||||||||||| |||||||||||
Sbjct: 215 ccacccgccgccgccgctgcggctg 239
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>gb|AC189415.1| Brassica rapa subsp. pekinensis clone KBrB061L05, complete sequence
          Length = 126831

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 234    tccgcgcagaagaagaagagaggga 258
              |||| ||||||||||||||||||||
Sbjct: 108502 tccgagcagaagaagaagagaggga 108526
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>ref|NM_002372.2| Homo sapiens mannosidase, alpha, class 2A, member 1 (MAN2A1), mRNA
          Length = 5128

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 ccgccgccgacgctgcggctg 359
           |||||||||||||||||||||
Sbjct: 354 ccgccgccgacgctgcggctg 334
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
             complete sequence
          Length = 187034

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 335   ccacccgccgccgacgctgcggctg 359
             ||||||||||||| |||||||||||
Sbjct: 28230 ccacccgccgccgccgctgcggctg 28254
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>gb|BC031659.1| Homo sapiens mannosidase, alpha, class 2A, member 1, mRNA (cDNA
           clone IMAGE:5171546), with apparent retained intron
          Length = 1731

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 ccgccgccgacgctgcggctg 359
           |||||||||||||||||||||
Sbjct: 440 ccgccgccgacgctgcggctg 420
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 343     cgccgacgctgcggctgaagc 363
               |||||||||||||||||||||
Sbjct: 2977035 cgccgacgctgcggctgaagc 2977055
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>gb|AF032873.1|AF032873 Manduca sexta inebriated protein mRNA, complete cds
          Length = 4956

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 343 cgccgacgctgcggctgaagcagtg 367
           ||||||||||||| |||||||||||
Sbjct: 353 cgccgacgctgcgcctgaagcagtg 329
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>gb|AC012603.7| Homo sapiens chromosome 5 clone CTC-332L22, complete sequence
          Length = 146999

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 339   ccgccgccgacgctgcggctg 359
             |||||||||||||||||||||
Sbjct: 77805 ccgccgccgacgctgcggctg 77785
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>gb|AC026307.16|AC026307 Homo sapiens 12 BAC RP11-753N8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166357

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 779    aagagaggatacaggagagga 799
              |||||||||||||||||||||
Sbjct: 111545 aagagaggatacaggagagga 111525
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>dbj|AK104438.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D12, full
           insert sequence
          Length = 1759

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 335 ccacccgccgccgacgctgcggctg 359
           ||||||||||||| |||||||||||
Sbjct: 150 ccacccgccgccgccgctgcggctg 174
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>dbj|AK068658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161J09, full
           insert sequence
          Length = 1922

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 335 ccacccgccgccgacgctgcggctg 359
           ||||||||||||| |||||||||||
Sbjct: 216 ccacccgccgccgccgctgcggctg 240
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>gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8, complete sequence
          Length = 216067

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 339   ccgccgccgacgctgcggctg 359
             |||||||||||||||||||||
Sbjct: 40325 ccgccgccgacgctgcggctg 40305
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>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18,
             complete sequence
          Length = 184543

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 740   tgcctgtatttatcttgtact 760
             |||||||||||||||||||||
Sbjct: 46817 tgcctgtatttatcttgtact 46837
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>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18,
             complete sequence
          Length = 253172

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 740   tgcctgtatttatcttgtact 760
             |||||||||||||||||||||
Sbjct: 85250 tgcctgtatttatcttgtact 85270
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>gb|BC111062.1| Homo sapiens cDNA clone IMAGE:5743758
          Length = 1850

 Score = 42.1 bits (21), Expect = 3.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 ccgccgccgacgctgcggctg 359
           |||||||||||||||||||||
Sbjct: 405 ccgccgccgacgctgcggctg 385


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 115,087,662
Number of extensions: 7056433
Number of successful extensions: 120593
Number of sequences better than 10.0: 30
Number of HSP's gapped: 120593
Number of HSP's successfully gapped: 41
Length of query: 837
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 815
Effective length of database: 18,508,616,841
Effective search space: 15084522725415
Effective search space used: 15084522725415
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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