ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5b07 |
|---|---|
| Clone Library Name | barley_pub |
>Q09850:ENG2_SCHPO Putative endo-1,3(4)-beta-glucanase 2 - Schizosaccharomyces pombe| (Fission yeast) Length = 706 Score = 124 bits (310), Expect = 2e-27 Identities = 128/533 (24%), Positives = 220/533 (41%), Gaps = 38/533 (7%) Frame = +3 Query: 27 KWRLRMNSGQTFLLYA-----SAPIGLQQASVTQLA-APGFSGVIRIAYLPDPAM----- 173 K+R+++ G+ + LYA S+ L AS +QL + F+G+I+I +P+ ++ Sbjct: 182 KYRIQLTDGKIWFLYAFPTSSSSTFNLTLASNSQLTTSTKFTGLIQICKVPNESVNNSYP 241 Query: 174 EAVLDQYSRCYPTAGEAALNRPFCIDYAWRK---QGWGDL--LMLANPLHLRLLSEDCSV 338 + + D + Y T+ + W + G+ +L LM A P H++ D Sbjct: 242 DTIYDASAGVYTTSISLSAQVSGTTGEYWFRFATAGYTNLNPLMFALPHHMQSFGSDTQA 301 Query: 339 RVLDDFKYRSIDGDLVGVVGDSWVLKTDPLSPT--------WHS-TRGVNDDGVDEVVAA 491 + G + +W L L PT W+ + + + + AA Sbjct: 302 YKTGLGLASTTMGIMFAYATKTWHLIEKNL-PTQVGFLPIPWNGGSNTYSPTALAAIRAA 360 Query: 492 LRKDVDSLASSPIATTSSYFYGKXXXXXXXXXXXXXXV---------GCPEVIPAVHRFL 644 D++ + S Y GK + G ++ A+ RF Sbjct: 361 CATDINFDVVNASNLDSMYTSGKIVAMYAQVCLVASRILGDSTLTNTGLTKLKQAMARFT 420 Query: 645 KATVTPWLDGSFQGNGFLYDPKWGGLVTKQGLQDSGADFGFGIYNDHHYHLGYFLYAIAV 824 T Q +YD + G+++ G AD+G YNDHH+H GY +YA AV Sbjct: 421 TNT---------QMYPLVYDTTYKGIISTAGYSSPLADYGNTYYNDHHFHWGYHIYACAV 471 Query: 825 LAKIDPSWGRKFMSQAYSMVADFMTLSRKCGASYTRLRTFDLWKLHSWAGGLTEFGDGRN 1004 + +DPSW + + + + + R FD + HSWA G+ E GDG++ Sbjct: 472 IGLLDPSWLVNDNIRYVNALLRDSANPSESDTYFAMFRNFDWFVGHSWATGIFESGDGKD 531 Query: 1005 QESTSEAVNAYYSAALLGLSYGDTHLVSVGATLTAFEMLAAQTWWHVREGEGIYEDDFSS 1184 +ESTSE N Y+ L G+ DT L++ + A + T+ ++ + Sbjct: 532 EESTSEDFNFLYATKLWGMVRNDTVLINRANLMLAVLKNSLNTYIYMTPTTSVQPSQI-L 590 Query: 1185 NNRVVGVLWANKRDSGLWFAPPEWKECRLGIQLLPLLPISEALFPDIGFVKDLVSWTTPA 1364 N V G+ + NK D +F+ E+ C+ GI ++P PIS L +D + P Sbjct: 591 GNYVTGITFMNKVDYATYFSAEEY--CKQGIHMIPTTPISGYLRSPSYVQQDWNAKIAPI 648 Query: 1365 LARDGVGEGWKGFVYALEGVYDKESA----LAKTRALASHDDGNTLTNLLWWL 1511 + + W G +++ +YD ++A A T D+G + T W+L Sbjct: 649 I--NTFSNNWTGILWSNYAIYDPKTAYNTFAASTFTADKIDNGASKT---WYL 696
>Q9UT45:ENG1_SCHPO Endo-1,3(4)-beta-glucanase 1 precursor - Schizosaccharomyces pombe| (Fission yeast) Length = 1016 Score = 116 bits (291), Expect = 3e-25 Identities = 131/501 (26%), Positives = 205/501 (40%), Gaps = 22/501 (4%) Frame = +3 Query: 6 PCDDARTKWRLRMNSGQTFLLYASAPIGLQQASVTQLAAPG--FSGVIRIAYLP--DPAM 173 P A K+R+ M+ +L+Y S +Q+ F+G I+IA +P D Sbjct: 219 PGTSAVQKYRVTMSDNHVWLIYIYGDSLTLTESTSQMLVGSNTFNGYIQIAKIPLGDGTA 278 Query: 174 EAVLDQYSRCYPTAGEAALNRPFCIDY-AWRKQGWGDLLMLANPLHLRLLSE-DCSV--- 338 EA+ D Y+ Y T + + Y ++ GD + PL L + D +V Sbjct: 279 EALYDTYAGVYITGISISGYVEDAVGYYSFDFTTAGDTSV--EPLFFLLPHQVDTAVSGT 336 Query: 339 RVLDDFKYRSIDGDLVGVVGDSWVLKTD--------PLSPTWHSTRGVNDDGVDEVVAAL 494 +V + GD+ G+S P SPT G +++ ++ + Sbjct: 337 KVTSIVLASLVSGDMNAAAGNSITFAEAIPQDIGFLPWSPTGGQI-GYSEEALEIIAEVA 395 Query: 495 RKDVDSLASSPIATTSSYFYGKXXXXXXXXXXXXXXV-GCPEVIPAVHRFLKATVTPWLD 671 ++ S+ S Y+ GK + G + L+A ++D Sbjct: 396 GTELGEDFSANSNLNSMYYSGKVLAKYAMLCVTINDILGDETSSEQCIQKLEAAFARFVD 455 Query: 672 GSFQGNGFLYDPKWGGLVTKQGLQ-DSGADFGFGIYNDHHYHLGYFLYAIAVLAKIDPSW 848 Q YD W G+V+ GL DS ADFG YNDHH+H GYF++ AV+ IDP W Sbjct: 456 NQ-QIYPLTYDNTWKGVVSVAGLSGDSLADFGNSYYNDHHFHYGYFVFTAAVIGHIDPDW 514 Query: 849 GRKFMSQAY--SMVADFMTLSRKCGASYTRLRTFDLWKLHSWAGGLTEFGDGRNQESTSE 1022 ++ + +V D S + + R D++ H WA GL E DG+++ESTSE Sbjct: 515 INTGNNKEWVNFLVRDVANPSSN-DPYFPKHRMIDIYHGHGWASGLFESNDGKDEESTSE 573 Query: 1023 AVNAYYSAALLGLSYGDTHLVSVGATLTAFEMLAAQTWWHVREGEGIYEDDFSSNNRVVG 1202 N ++ L G GD+ + + E A ++ +G + N V G Sbjct: 574 DYNFFFGMKLWGQVIGDSDMEDRANIILGIERNALNK--YMLYADGNVQPTSMQPNYVAG 631 Query: 1203 VLWANKRDSGLWFAPPEWKECRLGIQLLPLLPISEALFPDIGFVKDLVSWTT-PALARDG 1379 + + NK +F E GI +LP+ PIS A FV L W A D Sbjct: 632 ITFMNKITHTTYFGTN--IEYIQGIHMLPITPIS-AFIRGPSFV--LAEWNALLASVIDY 686 Query: 1380 VGEGWKGFVYALEGVYDKESA 1442 V GW+ +YA + + E + Sbjct: 687 VDSGWRSLLYANLAIAEPEES 707
>P53753:ENG1_YEAST Endo-1,3(4)-beta-glucanase 1 precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 1117 Score = 108 bits (269), Expect = 9e-23 Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 6/257 (2%) Frame = +3 Query: 696 LYDPKWGGLVTKQ--GLQDSGADFGFGIYNDHHYHLGYFLYAIAVL----AKIDPSWGRK 857 +YD K+ GLV+ G + DFG YNDHH+H GY ++A AV+ +K++ +W Sbjct: 833 IYDTKFNGLVSSGDWGSTSTQYDFGNTYYNDHHFHYGYIIHAAAVIGYVDSKLNGTWAAD 892 Query: 858 FMSQAYSMVADFMTLSRKCGASYTRLRTFDLWKLHSWAGGLTEFGDGRNQESTSEAVNAY 1037 S+V D S K + + R FD + HSWA GL E G+G+N+ES+SE N Sbjct: 893 NKDWVNSLVRDVANPSEK-DEYFAQSRMFDWFNGHSWAAGLYENGNGKNEESSSEDYNFA 951 Query: 1038 YSAALLGLSYGDTHLVSVGATLTAFEMLAAQTWWHVREGEGIYEDDFSSNNRVVGVLWAN 1217 Y+ L G + GD + G + + M A + + + E + N+V G+L+ N Sbjct: 952 YAMKLWGATIGDQSMELRGDLMISI-MKDAMNDYFYYQNDNTVEPEEIIGNKVSGILFDN 1010 Query: 1218 KRDSGLWFAPPEWKECRLGIQLLPLLPISEALFPDIGFVKDLVSWTTPALARDGVGEGWK 1397 D +F E GI +LP+ P+S + + ++ + P + + + GW Sbjct: 1011 IIDYTTYFGTN--TEYIHGIHMLPITPVSSNIRSETFVEEEWQTKIEPII--ESIESGWT 1066 Query: 1398 GFVYALEGVYDKESALA 1448 G + + ++D + A Sbjct: 1067 GILKLNQALFDPVDSYA 1083
>Q12168:ENG2_YEAST Endo-1,3(4)-beta-glucanase 2 - Saccharomyces cerevisiae (Baker's| yeast) Length = 779 Score = 99.4 bits (246), Expect = 4e-20 Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%) Frame = +3 Query: 699 YDPKWGGLVTKQGLQDSGADFGFGIYNDHHYHLGYFLYAIAVLAKIDP--------SWGR 854 YD W G+++ S DFG YNDHH+H Y + A+++ +D SW Sbjct: 502 YDVSWKGIISSGS---SSQDFGNSYYNDHHFHYSYHVITAAIISLVDSDLSGVTNNSWLE 558 Query: 855 KFMSQAYSMVADFMTLSRKCGASYTRLRTFDLWKLHSWAGGLTEFGDGRNQESTSEAVNA 1034 ++ D+ + + + R+FD + HSWA GL GDG+++ESTSE VN+ Sbjct: 559 NNRDWVECLIRDYSGVDND-DPYFPQFRSFDWFNGHSWAKGLFPSGDGKDEESTSEDVNS 617 Query: 1035 YYSAALLGLSYGDTHLVSVGATLTAFEMLAAQTWWHVREGEGIYEDDFSSNNRVVGVLWA 1214 Y+ L GL G++ L + Q+++ + +F N+V G+L+ Sbjct: 618 CYAIKLWGLVTGNSKLTDIANLQLGIMRNVFQSYFLYESNNTVQPKEF-IGNKVSGILFE 676 Query: 1215 NKRDSGLWFA-PPEWKECRLGIQLLPLLPISEA--LFPDIGFVKDLVSW---TTPALARD 1376 NK D +F P++ I ++ +PI+ A FVK+ W P + D Sbjct: 677 NKIDHATYFGMEPQY------IHMIHAIPITSASSWVRTPNFVKE--EWEEKMQPII--D 726 Query: 1377 GVGEGWKGFV 1406 V +GWKG + Sbjct: 727 QVNDGWKGII 736
>Q21M27:GLGC_SACD2 Glucose-1-phosphate adenylyltransferase - Saccharophagus degradans| (strain 2-40 / ATCC 43961 / DSM 17024) Length = 425 Score = 33.5 bits (75), Expect = 2.9 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -2 Query: 1687 QQHSQSETRAFSLAGTHDI-----PEEHSTSPAIHTQRHQWPYWRYQQHLP 1550 + H +ET + GT D E S +P+++ H WP W YQ LP Sbjct: 256 RDHDTNETAYWRDVGTLDSFWEANMELVSPNPSLNLYNHDWPIWTYQTQLP 306
>Q9BE18:MAGE1_MACFA Melanoma-associated antigen E1 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 957 Score = 32.7 bits (73), Expect = 5.0 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Frame = +1 Query: 673 AASRGMASCMIPNGAALSPSRGCRTPAQTLASGSXXXXXXXWATSCMPLLCLPRSIHPGE 852 AAS G + ++P S + G T + L++ +TS P C G Sbjct: 263 AASDGQSISLVPTPGKGSSTSGPPTATEGLSTSVQPTAGEGPSTSVPPTPC-------GG 315 Query: 853 ESSCLRPTPWLPIS*HCPASA-------VRATPG*GPSISGSCIPGPED*RSSAM 996 S+ + PTP +S P +A V TPG GPS S +P P + RS+++ Sbjct: 316 LSTSVPPTPGEGLSTSVPPTATEGLSTSVPPTPGEGPST--SVLPTPGEGRSTSV 368
>P0C2S7:TX36A_PHONI Neurotoxin Pn3-6A precursor - Phoneutria nigriventer (Brazilian armed| spider) Length = 93 Score = 32.3 bits (72), Expect = 6.5 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 12/57 (21%) Frame = +3 Query: 1635 SCVPASENARVSDCECC-----------WFGVRYRS-GCSLYFKHQYITNSRKKKKK 1769 +C+ E + DCECC WFG ++ GCS +QY + +K+K K Sbjct: 36 ACLARGETCK-DDCECCDCDNQCYCPFDWFGGKWHPVGCSCAHANQYFCDHKKEKCK 91
>Q7W0T5:LEXA_BORPA LexA repressor - Bordetella parapertussis| Length = 216 Score = 32.3 bits (72), Expect = 6.5 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Frame = -1 Query: 350 VEHPNGAVLGEQPEV-ERVGEHEQIPPPLLAPCVVDAEGPVERGLPGRRVAPAVLVEDRL 174 +E GA G + +V + Q+ PLLA V+ G V G P +L + + Sbjct: 57 IELTAGASRGIRLKVPDNAAPSAQLTHPLLAQLVLPLVGRVAAGSP-------ILASEHV 109 Query: 173 HGRVGQ-----VSDPDDAGEPRGRQLRDAGLLQAD 84 VG PD + RG +RDAG+L+ D Sbjct: 110 EREVGVDPGLFTQTPDYLLKVRGMSMRDAGILEGD 144
>Q96JJ6:JPH4_HUMAN Junctophilin-4 - Homo sapiens (Human)| Length = 628 Score = 32.3 bits (72), Expect = 6.5 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = -1 Query: 1373 PRQGWRGPAHQVLDK--PNVWEEGLADRQERQELDPQPAFLPLRWRKPESTVPL 1218 PRQ G + LD+ P V+E GL + EL PA WR P PL Sbjct: 427 PRQDSEGSDTEPLDEDSPGVYENGLTPSEGSPELPSSPASSRQPWRPPACRSPL 480
>Q7VRY0:LEXA_BORPE LexA repressor - Bordetella pertussis| Length = 216 Score = 32.0 bits (71), Expect = 8.5 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = -1 Query: 284 QIPPPLLAPCVVDAEGPVERGLPGRRVAPAVLVEDRLHGRVGQ-----VSDPDDAGEPRG 120 Q+ PLLA V+ G V G P +L + + VG PD + RG Sbjct: 80 QLTHPLLAQLVLPLVGRVAAGSP-------ILASEHVEREVGVDPGLFAQTPDYLLKVRG 132 Query: 119 RQLRDAGLLQAD 84 +RDAG+L+ D Sbjct: 133 MSMRDAGILEGD 144
>Q7WCK0:LEXA_BORBR LexA repressor - Bordetella bronchiseptica (Alcaligenes| bronchisepticus) Length = 216 Score = 32.0 bits (71), Expect = 8.5 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = -1 Query: 284 QIPPPLLAPCVVDAEGPVERGLPGRRVAPAVLVEDRLHGRVGQ-----VSDPDDAGEPRG 120 Q+ PLLA V+ G V G P +L + + VG PD + RG Sbjct: 80 QLTHPLLAQLVLPLVGRVAAGSP-------ILASEHVEREVGVDPGLFAQTPDYLLKVRG 132 Query: 119 RQLRDAGLLQAD 84 +RDAG+L+ D Sbjct: 133 MSMRDAGILEGD 144
>Q61001:LAMA5_MOUSE Laminin subunit alpha-5 precursor - Mus musculus (Mouse)| Length = 3718 Score = 32.0 bits (71), Expect = 8.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 Query: 806 PVCHCCACQDRSILGKKVHVSGLLHGCR 889 P CH CAC R L ++ V GL H CR Sbjct: 633 PDCHACACDPRGALDQQCGVGGLCH-CR 659 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 308,712,631 Number of extensions: 7307479 Number of successful extensions: 23317 Number of sequences better than 10.0: 12 Number of HSP's gapped: 23272 Number of HSP's successfully gapped: 12 Length of query: 590 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 471 Effective length of database: 68,045,334 Effective search space: 32049352314 Effective search space used: 32049352314 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
