| Clone Name | FLbaf2b15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT834444.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029L17, full insert sequence Length = 1329 Score = 577 bits (291), Expect = e-161 Identities = 534/615 (86%) Strand = Plus / Plus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 550 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 609 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 610 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 669 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 670 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 729 Query: 328 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 387 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 730 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 789 Query: 388 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 447 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 790 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 849 Query: 448 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacaggtgtacaatg 507 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 850 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacaggtatacaatg 909 Query: 508 ccctgggggttagctacaagcgagagaacaaactggacaaggcaatcaagcaattcgaga 567 ||||||| || |||||||||||||| |||||||| |||||| | ||| ||||||| |||| Sbjct: 910 ccctgggagtcagctacaagcgagataacaaacttgacaagtcgatccagcaatttgaga 969 Query: 568 aggctgtggagctccaaccgggctatgtgacggcatggaacaacctaggcgacgcgtatg 627 ||||||| ||||| || || ||||||||||| || ||||||||||| || ||||| |||| Sbjct: 970 aggctgttgagcttcagccaggctatgtgacagcttggaacaacctcggggacgcatatg 1029 Query: 628 agcagcagaaggacctcgcgtcagcgctcagggcgttcgaagaggtgttactatttgatc 687 |||| |||| || || ||| ||||||| ||| ||||| ||||| | |||||||||| Sbjct: 1030 agcaaaagaaagatctgaagtctgcgctcaaggcattcgaggaggtactcctatttgatc 1089 Query: 688 caaacaacaaggtggcaaggccacgccgagatgacctcaagtcgcgcgtgggcatgtaca 747 ||||||||| ||| || |||||||||||||||||||| ||| ||| ||||||||||||| Sbjct: 1090 caaacaacacggtcgccaggccacgccgagatgacctaaagcagcgtgtgggcatgtaca 1149 Query: 748 agggggtgccagtga 762 |||| || ||||||| Sbjct: 1150 agggagtcccagtga 1164
>ref|NM_001071310.1| Oryza sativa (japonica cultivar-group) Os10g0460900 (Os10g0460900) mRNA, complete cds Length = 855 Score = 430 bits (217), Expect = e-117 Identities = 388/445 (87%) Strand = Plus / Plus Query: 318 agagagcttgatctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagc 377 ||||||||||||||||| || ||||| |||||||||||||||||||||||||| | ||| Sbjct: 394 agagagcttgatctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagt 453 Query: 378 gctactgaactttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagct 437 |||||||| ||||||||||||||| |||||||| ||| |||| ||||||||||| ||| Sbjct: 454 gctactgagtattttgagcttggagcagtcatgctacggagaaaattttaccctgctgct 513 Query: 438 atcaaatatctacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 497 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 514 atcaaatatctacagcaagcaatccaaaaatgggatagggatgagcaagatcttgcacag 573 Query: 498 gtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatcaag 557 || |||||||||||||| || |||||||||||||| |||||||| |||||| | ||| || Sbjct: 574 gtatacaatgccctgggagtcagctacaagcgagataacaaacttgacaagtcgatccag 633 Query: 558 caattcgagaaggctgtggagctccaaccgggctatgtgacggcatggaacaacctaggc 617 ||||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| || Sbjct: 634 caatttgagaaggctgttgagcttcagccaggctatgtgacagcttggaacaacctcggg 693 Query: 618 gacgcgtatgagcagcagaaggacctcgcgtcagcgctcagggcgttcgaagaggtgtta 677 ||||| |||||||| |||| || || ||| ||||||| ||| ||||| ||||| | Sbjct: 694 gacgcatatgagcaaaagaaagatctgaagtctgcgctcaaggcattcgaggaggtactc 753 Query: 678 ctatttgatccaaacaacaaggtggcaaggccacgccgagatgacctcaagtcgcgcgtg 737 ||||||||||||||||||| ||| || |||||||||||||||||||| ||| ||| ||| Sbjct: 754 ctatttgatccaaacaacacggtcgccaggccacgccgagatgacctaaagcagcgtgtg 813 Query: 738 ggcatgtacaagggggtgccagtga 762 |||||||||||||| || ||||||| Sbjct: 814 ggcatgtacaagggagtcccagtga 838
>dbj|AK243344.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100059O14, full insert sequence Length = 1918 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 553 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 612 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 613 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 672 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 673 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 732 Query: 328 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 387 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 733 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 792 Query: 388 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 447 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 793 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 852 Query: 448 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 497 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 853 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 902
>ref|NM_001071311.1| Oryza sativa (japonica cultivar-group) Os10g0461100 (Os10g0461100) mRNA, complete cds Length = 1984 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 598 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 657 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 658 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 717 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 718 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 777 Query: 328 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 387 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 778 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 837 Query: 388 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 447 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 838 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 897 Query: 448 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 497 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 898 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 947
>dbj|AK072202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158D14, full insert sequence Length = 1895 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 564 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 623 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 624 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 683 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 684 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 743 Query: 328 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 387 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 744 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 803 Query: 388 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 447 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 804 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 863 Query: 448 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 497 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 864 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 913
>dbj|AK065396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F13, full insert sequence Length = 1984 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 599 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 658 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 659 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 718 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 719 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 778 Query: 328 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 387 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 779 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 838 Query: 388 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 447 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 839 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 898 Query: 448 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 497 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 899 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 948
>ref|NM_001068143.1| Oryza sativa (japonica cultivar-group) Os08g0347400 (Os08g0347400) mRNA, complete cds Length = 351 Score = 359 bits (181), Expect = 1e-95 Identities = 268/297 (90%) Strand = Plus / Plus Query: 201 atggtttacgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcata 260 |||||||| ||||| ||||| || |||||||| ||||||||| | || ||||| |||||| Sbjct: 1 atggtttatgaggttggggaactattcgagcttggaattcagttgtcttatcttctcata 60 Query: 261 ctacttggcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcaga 320 |||||||| ||||||||| ||||||||||||| || |||||||||||||||||||||||| Sbjct: 61 ctacttggtctgcttggagctggtacatttttcgtcatccgtcaggttcttgtccgcaga 120 Query: 321 gagcttgatctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgct 380 |||||||||||||| || ||||| |||||||||||||||||||||||||| | ||| ||| Sbjct: 121 gagcttgatctttctgccaaagatttgcaggaacaagtgagaagtggtgatgcaagtgct 180 Query: 381 actgaactttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatc 440 ||||| ||||||||| ||||| |||||||| ||| |||| ||||||||||| |||||| Sbjct: 181 actgagtattttgagctgggagcagtcatgctacggagaaaattttaccctgccgctatc 240 Query: 441 aaatatctacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 497 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 241 aaatatctacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 297
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 214 bits (108), Expect = 5e-52 Identities = 180/204 (88%) Strand = Plus / Minus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| ||||||| Sbjct: 15759719 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatttaaacatggttt 15759660 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| ||||| || |||||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 15759659 atgaggttggggaactattcgagcttggaattcagttgtcttatcttctcatactacttg 15759600 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 15759599 gtctgcttggagctggtacatttttcgtcatccgtcaggttcttgtccgcagagagcttg 15759540 Query: 328 atctttccgcgaaagacttgcagg 351 ||||||| || ||||| ||||||| Sbjct: 15759539 atctttctgccaaagatttgcagg 15759516 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 349 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 408 |||||||||||||||||||||| | ||| |||||||| ||||||||| ||||| |||| Sbjct: 15759125 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagctgggagcagtca 15759066 Query: 409 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 468 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 15759065 tgctacggagaaaattttaccctgccgctatcaaatatctacagcaagcaatccaaaaat 15759006 Query: 469 gggatagagatgagcaagatctcgcacaggt 499 |||||||||||||||||||||| |||||||| Sbjct: 15759005 gggatagagatgagcaagatcttgcacaggt 15758975 Score = 95.6 bits (48), Expect = 3e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 651 gcgctcagggcgttcgaagaggtgttactatttgatccaaacaacaaggtggcaaggcca 710 ||||||| ||| ||||| |||||| | || |||||||| ||||||| ||| || |||||| Sbjct: 15768171 gcgctcaaggcattcgaggaggtgctcctctttgatccgaacaacacggtcgccaggcca 15768230 Query: 711 cgccgagatgacctcaagtcgcgcgtgggcatgtacaagggggtgccagtga 762 |||||||||||||| ||| ||| ||||||||||||||||| || ||||||| Sbjct: 15768231 cgccgagatgacctgaagcagcgtgtgggcatgtacaagggagtcccagtga 15768282 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 495 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 554 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| ||| Sbjct: 15768022 caggtgtacaatgccctgggagtcagctacaaacgggataacaaactcgacaaggcgatc 15768081 Query: 555 aagcaattcgagaaggc 571 ||||||| |||||||| Sbjct: 15768082 cagcaatttgagaaggc 15768098
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 214 bits (108), Expect = 5e-52 Identities = 180/204 (88%) Strand = Plus / Minus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| ||||||| Sbjct: 74175 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatttaaacatggttt 74116 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| ||||| || |||||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 74115 atgaggttggggaactattcgagcttggaattcagttgtcttatcttctcatactacttg 74056 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 74055 gtctgcttggagctggtacatttttcgtcatccgtcaggttcttgtccgcagagagcttg 73996 Query: 328 atctttccgcgaaagacttgcagg 351 ||||||| || ||||| ||||||| Sbjct: 73995 atctttctgccaaagatttgcagg 73972 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 349 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 408 |||||||||||||||||||||| | ||| |||||||| ||||||||| ||||| |||| Sbjct: 73581 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagctgggagcagtca 73522 Query: 409 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 468 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 73521 tgctacggagaaaattttaccctgccgctatcaaatatctacagcaagcaatccaaaaat 73462 Query: 469 gggatagagatgagcaagatctcgcacaggt 499 |||||||||||||||||||||| |||||||| Sbjct: 73461 gggatagagatgagcaagatcttgcacaggt 73431 Score = 95.6 bits (48), Expect = 3e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 651 gcgctcagggcgttcgaagaggtgttactatttgatccaaacaacaaggtggcaaggcca 710 ||||||| ||| ||||| |||||| | || |||||||| ||||||| ||| || |||||| Sbjct: 82627 gcgctcaaggcattcgaggaggtgctcctctttgatccgaacaacacggtcgccaggcca 82686 Query: 711 cgccgagatgacctcaagtcgcgcgtgggcatgtacaagggggtgccagtga 762 |||||||||||||| ||| ||| ||||||||||||||||| || ||||||| Sbjct: 82687 cgccgagatgacctgaagcagcgtgtgggcatgtacaagggagtcccagtga 82738 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 495 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 554 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| ||| Sbjct: 82478 caggtgtacaatgccctgggagtcagctacaaacgggataacaaactcgacaaggcgatc 82537 Query: 555 aagcaattcgagaaggc 571 ||||||| |||||||| Sbjct: 82538 cagcaatttgagaaggc 82554
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 206 bits (104), Expect = 1e-49 Identities = 227/268 (84%) Strand = Plus / Minus Query: 495 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 554 ||||| |||||||||||||| || |||||||||||||| |||||||| |||||| | ||| Sbjct: 55406 caggtatacaatgccctgggagtcagctacaagcgagataacaaacttgacaagtcgatc 55347 Query: 555 aagcaattcgagaaggctgtggagctccaaccgggctatgtgacggcatggaacaaccta 614 ||||||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| Sbjct: 55346 cagcaatttgagaaggctgttgagcttcagccaggctatgtgacagcttggaacaacctc 55287 Query: 615 ggcgacgcgtatgagcagcagaaggacctcgcgtcagcgctcagggcgttcgaagaggtg 674 || ||||| |||||||| |||| || || ||| ||||||| ||| ||||| ||||| Sbjct: 55286 ggggacgcatatgagcaaaagaaagatctgaagtctgcgctcaaggcattcgaggaggta 55227 Query: 675 ttactatttgatccaaacaacaaggtggcaaggccacgccgagatgacctcaagtcgcgc 734 | ||||||||||||||||||| ||| || |||||||||||||||||||| ||| ||| Sbjct: 55226 ctcctatttgatccaaacaacacggtcgccaggccacgccgagatgacctaaagcagcgt 55167 Query: 735 gtgggcatgtacaagggggtgccagtga 762 ||||||||||||||||| || ||||||| Sbjct: 55166 gtgggcatgtacaagggagtcccagtga 55139 Score = 204 bits (103), Expect = 5e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 349 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 408 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 75771 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 75712 Query: 409 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 468 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 75711 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 75652 Query: 469 gggatagagatgagcaagatctcgcacaggt 499 |||||||||||||||||||||| |||||||| Sbjct: 75651 gggatagagatgagcaagatcttgcacaggt 75621 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 349 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 408 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 55934 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 55875 Query: 409 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 468 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 55874 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 55815 Query: 469 gggatagagatgagcaagatctcgcacaggt 499 ||||||| |||||||||||||| |||||||| Sbjct: 55814 gggatagggatgagcaagatcttgcacaggt 55784 Score = 182 bits (92), Expect = 2e-42 Identities = 176/204 (86%) Strand = Plus / Minus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 58470 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 58411 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 58410 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 58351 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 58350 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 58291 Query: 328 atctttccgcgaaagacttgcagg 351 ||||||| || ||||| ||||||| Sbjct: 58290 atctttctgccaaagagttgcagg 58267 Score = 182 bits (92), Expect = 2e-42 Identities = 176/204 (86%) Strand = Plus / Minus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 78301 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 78242 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 78241 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 78182 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 78181 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 78122 Query: 328 atctttccgcgaaagacttgcagg 351 ||||||| || ||||| ||||||| Sbjct: 78121 atctttctgccaaagagttgcagg 78098
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 206 bits (104), Expect = 1e-49 Identities = 227/268 (84%) Strand = Plus / Minus Query: 495 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 554 ||||| |||||||||||||| || |||||||||||||| |||||||| |||||| | ||| Sbjct: 16437307 caggtatacaatgccctgggagtcagctacaagcgagataacaaacttgacaagtcgatc 16437248 Query: 555 aagcaattcgagaaggctgtggagctccaaccgggctatgtgacggcatggaacaaccta 614 ||||||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| Sbjct: 16437247 cagcaatttgagaaggctgttgagcttcagccaggctatgtgacagcttggaacaacctc 16437188 Query: 615 ggcgacgcgtatgagcagcagaaggacctcgcgtcagcgctcagggcgttcgaagaggtg 674 || ||||| |||||||| |||| || || ||| ||||||| ||| ||||| ||||| Sbjct: 16437187 ggggacgcatatgagcaaaagaaagatctgaagtctgcgctcaaggcattcgaggaggta 16437128 Query: 675 ttactatttgatccaaacaacaaggtggcaaggccacgccgagatgacctcaagtcgcgc 734 | ||||||||||||||||||| ||| || |||||||||||||||||||| ||| ||| Sbjct: 16437127 ctcctatttgatccaaacaacacggtcgccaggccacgccgagatgacctaaagcagcgt 16437068 Query: 735 gtgggcatgtacaagggggtgccagtga 762 ||||||||||||||||| || ||||||| Sbjct: 16437067 gtgggcatgtacaagggagtcccagtga 16437040 Score = 204 bits (103), Expect = 5e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 349 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 408 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 16457672 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 16457613 Query: 409 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 468 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16457612 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 16457553 Query: 469 gggatagagatgagcaagatctcgcacaggt 499 |||||||||||||||||||||| |||||||| Sbjct: 16457552 gggatagagatgagcaagatcttgcacaggt 16457522 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 349 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 408 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 16437835 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 16437776 Query: 409 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 468 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16437775 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 16437716 Query: 469 gggatagagatgagcaagatctcgcacaggt 499 ||||||| |||||||||||||| |||||||| Sbjct: 16437715 gggatagggatgagcaagatcttgcacaggt 16437685 Score = 182 bits (92), Expect = 2e-42 Identities = 176/204 (86%) Strand = Plus / Minus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 16440371 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 16440312 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 16440311 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 16440252 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 16440251 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 16440192 Query: 328 atctttccgcgaaagacttgcagg 351 ||||||| || ||||| ||||||| Sbjct: 16440191 atctttctgccaaagagttgcagg 16440168 Score = 182 bits (92), Expect = 2e-42 Identities = 176/204 (86%) Strand = Plus / Minus Query: 148 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 207 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 16460202 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 16460143 Query: 208 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 267 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 16460142 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 16460083 Query: 268 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 327 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 16460082 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 16460023 Query: 328 atctttccgcgaaagacttgcagg 351 ||||||| || ||||| ||||||| Sbjct: 16460022 atctttctgccaaagagttgcagg 16459999
>gb|AC171733.2| Solanum lycopersicum chromosome 11 clone C11HBa0034I10, complete sequence Length = 87341 Score = 61.9 bits (31), Expect = 4e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 291 tttgtgatccgtcaggttcttgtccgcagagagcttgatctttccgcgaaagacttgca 349 |||||||| || || || |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 39711 tttgtgattcggcaagtccttgtccgcagagagcttgatctttctgccaaagaattgca 39769 Score = 48.1 bits (24), Expect = 0.064 Identities = 42/48 (87%) Strand = Plus / Plus Query: 582 caaccgggctatgtgacggcatggaacaacctaggcgacgcgtatgag 629 ||||| || ||||| ||||||||||||||||| ||||| || |||||| Sbjct: 41357 caacctggttatgtcacggcatggaacaaccttggcgatgcatatgag 41404
>ref|NM_102117.3| Arabidopsis thaliana unknown protein (AT1G22700) mRNA, complete cds Length = 1111 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 469 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 528 Query: 331 tttccgcgaaagacttgcaggaacaagt 358 | ||||| ||||| |||||||| ||||| Sbjct: 529 tctccgctaaagaattgcaggagcaagt 556
>ref|NM_180619.1| Arabidopsis thaliana unknown protein (AT1G22700) mRNA, complete cds Length = 1131 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 463 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 522 Query: 331 tttccgcgaaagacttgcaggaacaagt 358 | ||||| ||||| |||||||| ||||| Sbjct: 523 tctccgctaaagaattgcaggagcaagt 550
>gb|AF410279.1|AF410279 Arabidopsis thaliana At1g22700/T22J18_13 mRNA, complete cds Length = 1110 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 470 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 529 Query: 331 tttccgcgaaagacttgcaggaacaagt 358 | ||||| ||||| |||||||| ||||| Sbjct: 530 tctccgctaaagaattgcaggagcaagt 557
>gb|AY084882.1| Arabidopsis thaliana clone 120133 mRNA, complete sequence Length = 1128 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 463 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 522 Query: 331 tttccgcgaaagacttgcaggaacaagt 358 | ||||| ||||| |||||||| ||||| Sbjct: 523 tctccgctaaagaattgcaggagcaagt 550
>emb|BX813665.1|CNS0ADUP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1070 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 455 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 514 Query: 331 tttccgcgaaagacttgcaggaacaagt 358 | ||||| ||||| |||||||| ||||| Sbjct: 515 tctccgctaaagaattgcaggagcaagt 542
>gb|BT001148.1| Arabidopsis thaliana At1g22700/T22J18_13 mRNA, complete cds Length = 891 Score = 56.0 bits (28), Expect = 3e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 380 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 439 Query: 331 tttccgcgaaagacttgcaggaacaagt 358 | ||||| ||||| |||||||| ||||| Sbjct: 440 tctccgctaaagaattgcaggagcaagt 467
>emb|BX814448.1|CNS0ADTY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1039 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 418 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactcgacc 477 Query: 331 tttccgcgaaagacttgcaggaacaagtgag 361 | ||||| ||||| |||||||| | |||||| Sbjct: 478 tctccgctaaagagttgcaggagcgagtgag 508
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence Length = 84162 Score = 50.1 bits (25), Expect = 0.016 Identities = 67/81 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 50127 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 50186 Query: 331 tttccgcgaaagacttgcagg 351 | ||||| ||||| ||||||| Sbjct: 50187 tctccgctaaagaattgcagg 50207
>emb|BX813492.1|CNS0ADUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1258 Score = 50.1 bits (25), Expect = 0.016 Identities = 67/81 (82%) Strand = Plus / Plus Query: 271 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 330 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 455 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 514 Query: 331 tttccgcgaaagacttgcagg 351 | ||||| ||||| ||||||| Sbjct: 515 tctccgctaaagaattgcagg 535
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 466 aatgggatagagatgagcaagat 488 ||||||||||||||||||||||| Sbjct: 16841104 aatgggatagagatgagcaagat 16841082
>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0025G03 Length = 139560 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 466 aatgggatagagatgagcaagat 488 ||||||||||||||||||||||| Sbjct: 71262 aatgggatagagatgagcaagat 71240
>emb|AL672045.11| Human DNA sequence from clone RP11-577O19 on chromosome 1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) pseudogene, complete sequence Length = 180303 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 aagtgagaagtggtgagggaag 376 |||||||||||||||||||||| Sbjct: 39139 aagtgagaagtggtgagggaag 39160
>emb|CR721782.2|CNS0GJVG Tetraodon nigroviridis full-length cDNA Length = 1098 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ttgagttttgcacagtcagca 173 ||||||||||||||||||||| Sbjct: 522 ttgagttttgcacagtcagca 502
>gb|AC023608.3| Mus musculus chromosome 18 clone CT7-402J1, complete sequence Length = 138710 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 999 tgataacaaatcaattatttc 1019 ||||||||||||||||||||| Sbjct: 17078 tgataacaaatcaattatttc 17098
>emb|AL607146.6| Mouse DNA sequence from clone RP23-312G6 on chromosome 11 Contains the 5' end of a novel gene, complete sequence Length = 191046 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 999 tgataacaaatcaattatttc 1019 ||||||||||||||||||||| Sbjct: 132154 tgataacaaatcaattatttc 132134
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 932 ttctcatgatactcttgcgtttgct 956 ||||||||||||||||||| ||||| Sbjct: 165070 ttctcatgatactcttgcgcttgct 165046
>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2, complete sequence Length = 261927 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 791 ttcttgcatcagttttgaaca 811 ||||||||||||||||||||| Sbjct: 149228 ttcttgcatcagttttgaaca 149208
>gb|AC171909.2| Capitella capitata clone JGIBGZA-9H1, complete sequence Length = 33412 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 985 gaatatttacaacatgataac 1005 ||||||||||||||||||||| Sbjct: 7726 gaatatttacaacatgataac 7706
>dbj|AB017508.1| Bacillus halodurans C-125 genomic DNA, 32 kb fragment, complete cds Length = 32050 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 932 ttctcatgatactcttgcgtttgct 956 ||||||||||||||||||| ||||| Sbjct: 9584 ttctcatgatactcttgcgcttgct 9560 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 186,439,790 Number of extensions: 9564207 Number of successful extensions: 167259 Number of sequences better than 10.0: 31 Number of HSP's gapped: 167255 Number of HSP's successfully gapped: 47 Length of query: 1037 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1014 Effective length of database: 18,503,978,556 Effective search space: 18763034255784 Effective search space used: 18763034255784 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)