ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf1n11 |
|---|---|
| Clone Library Name | barley_pub |
>P24917:NDUV1_NEUCR NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial| precursor - Neurospora crassa Length = 493 Score = 312 bits (800), Expect = 9e-85 Identities = 144/185 (77%), Positives = 164/185 (88%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ N GTKL+CISGHVN PCTVEEEMSIP++ELI+KHCGGVRGGWDNLLAVIPGGSS P+ Sbjct: 279 RERNQGTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPI 338 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPKHICD LMD+DALK QSGLGTAA++VMDKSTDVV AI+RLS+FY+HESCGQCTPCR Sbjct: 339 LPKHICDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCR 398 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPEL Sbjct: 399 EGSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPEL 458 Query: 543 ERRIR 557 E RIR Sbjct: 459 EARIR 463
>Q92406:NDUV1_ASPNG NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial| precursor - Aspergillus niger Length = 496 Score = 308 bits (789), Expect = 2e-83 Identities = 142/186 (76%), Positives = 166/186 (89%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ N+GTKL+CISGHVN PCTVEEEMSI L+++I++HCGGVRGGWDNLLAVIPGGSS P+ Sbjct: 281 RERNAGTKLFCISGHVNNPCTVEEEMSISLRDVIDRHCGGVRGGWDNLLAVIPGGSSTPV 340 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPK ICDD LMD+DALK QSGLGTAAV+VMDKSTD+V AI+RLS FYKHESCGQCTPCR Sbjct: 341 LPKTICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSTFYKHESCGQCTPCR 400 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPEL Sbjct: 401 EGSKWTMHMMQRMEKGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPEL 460 Query: 543 ERRIRD 560 E RIR+ Sbjct: 461 EARIRE 466
>Q1RHA0:NUOF_RICBR NADH-quinone oxidoreductase subunit F - Rickettsia bellii (strain| RML369-C) Length = 417 Score = 296 bits (759), Expect = 5e-80 Identities = 135/185 (72%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + NN+GTK++CISGHVNKPC VEE M IPLKE+IEKH GGVRGGWDNL A+IPGGSSVPL Sbjct: 233 KPNNTGTKIFCISGHVNKPCNVEEAMGIPLKEIIEKHAGGVRGGWDNLKAIIPGGSSVPL 292 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPK +C+ MD+D+LKA S LGT ++VMDKSTD++ AIARLS FY HESCGQCTPCR Sbjct: 293 LPKSLCETADMDFDSLKAAGSSLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCR 352 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+W +M RL G+AK EID L EVTK+IEGHTICALGDAAAWP+QGLI+HFR E+ Sbjct: 353 EGTGWMWRVMMRLVKGDAKKSEIDQLLEVTKEIEGHTICALGDAAAWPIQGLIKHFRNEI 412 Query: 543 ERRIR 557 E RI+ Sbjct: 413 ESRIQ 417
>P56912:NUOF1_RHIME NADH-quinone oxidoreductase subunit F 1 - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 434 Score = 296 bits (758), Expect = 7e-80 Identities = 136/184 (73%), Positives = 157/184 (85%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R NN GTKLY +SGHVN+PCTVE+ MSIP ELIEKHCGG+RGGWDNLLAVIPGGSSVP Sbjct: 233 RPNNHGTKLYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPC 292 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +P D +MDYD L+ + SGLGTAAV+VMDKSTD++ AI RLS FYKHESCGQCTPCR Sbjct: 293 VPGAQMKDAIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCR 352 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+ +MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ Sbjct: 353 EGTGWMMRVMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEM 412 Query: 543 ERRI 554 E+RI Sbjct: 413 EKRI 416
>P25708:NDUV1_BOVIN NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Bos taurus (Bovine) Length = 464 Score = 293 bits (751), Expect = 4e-79 Identities = 139/190 (73%), Positives = 159/190 (83%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIRDRADR 572 E R++ A + Sbjct: 447 EERMQQFAQQ 456
>Q0MQI6:NDUV1_PANTR NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Pan troglodytes (Chimpanzee) Length = 464 Score = 293 bits (749), Expect = 7e-79 Identities = 138/185 (74%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIR 557 E R++ Sbjct: 447 EERMQ 451
>P49821:NDUV1_HUMAN NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Homo sapiens (Human) Length = 464 Score = 293 bits (749), Expect = 7e-79 Identities = 138/185 (74%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIR 557 E R++ Sbjct: 447 EERMQ 451
>Q91YT0:NDUV1_MOUSE NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Mus musculus (Mouse) Length = 464 Score = 292 bits (748), Expect = 1e-78 Identities = 138/185 (74%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIR 557 E R++ Sbjct: 447 EDRMQ 451
>Q0MQI4:NDUV1_PONPY NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Pongo pygmaeus (Orangutan) Length = 464 Score = 292 bits (747), Expect = 1e-78 Identities = 138/185 (74%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNYPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIR 557 E R++ Sbjct: 447 EERMQ 451
>Q68XY3:NUOF_RICTY NADH-quinone oxidoreductase subunit F - Rickettsia typhi| Length = 421 Score = 291 bits (745), Expect = 2e-78 Identities = 133/186 (71%), Positives = 159/186 (85%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + NN+GTK++CISGHVNKPC +EE M IPLKELIEK+ GGVRGGWDNL A+IPGG+SVPL Sbjct: 233 KPNNTGTKIFCISGHVNKPCNIEEAMGIPLKELIEKYAGGVRGGWDNLKAIIPGGASVPL 292 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPK +C+ V MD+D+L+ V SGLGT ++VMD+STD++ AIARLS FY HESCGQCTPCR Sbjct: 293 LPKSLCE-VEMDFDSLRTVGSGLGTGGIIVMDRSTDIIYAIARLSKFYMHESCGQCTPCR 351 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+W +M RL GNAK EI+ L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+ Sbjct: 352 EGTGWMWRVMMRLVNGNAKKTEIETLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEI 411 Query: 543 ERRIRD 560 E RI++ Sbjct: 412 EERIKN 417
>Q9ZE33:NUOF_RICPR NADH-quinone oxidoreductase subunit F - Rickettsia prowazekii| Length = 421 Score = 291 bits (745), Expect = 2e-78 Identities = 133/185 (71%), Positives = 159/185 (85%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + NN+GTK++CISGHVNKPC +EE M +PLKELIEK+ GGVRGGW+NL A+IPGG+SVPL Sbjct: 233 KPNNTGTKVFCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKAIIPGGASVPL 292 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPK +C+ V MD+D+L+ V SGLGT ++VMDKSTD++ AIARLS FY HESCGQCTPCR Sbjct: 293 LPKSLCE-VEMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCR 351 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+ Sbjct: 352 EGTGWMWRVMMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEI 411 Query: 543 ERRIR 557 E+RI+ Sbjct: 412 EQRIK 416
>Q0MQI5:NDUV1_GORGO NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Gorilla gorilla gorilla (Lowland gorilla) Length = 464 Score = 291 bits (745), Expect = 2e-78 Identities = 137/185 (74%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGW+NLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWENLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIR 557 E R++ Sbjct: 447 EERMQ 451
>Q8HXQ9:NDUV1_MACFA NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial| precursor - Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 464 Score = 290 bits (743), Expect = 4e-78 Identities = 137/185 (74%), Positives = 157/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R+ NSGTKL+ ISGHVN PCTVEEEMS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL FYK+ESCGQCTPCR Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKYESCGQCTPCR 386 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446 Query: 543 ERRIR 557 E R++ Sbjct: 447 EERMQ 451
>Q4UKA6:NUOF_RICFE NADH-quinone oxidoreductase subunit F - Rickettsia felis| (Rickettsia azadi) Length = 422 Score = 289 bits (739), Expect = 1e-77 Identities = 134/185 (72%), Positives = 156/185 (84%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + NN+GTK++CISGHVNKPC VEE M I LKELIEK+ GGVRGGWDNL A+IPGGSSVPL Sbjct: 233 KPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPL 292 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPK +C+ V MD+D+L+ SGLGT ++VMDKSTD++ AIARLS FY HESCGQCTPCR Sbjct: 293 LPKSLCE-VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCR 351 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+W +M RL GNA+ EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+ Sbjct: 352 EGTGWMWRVMMRLVKGNAQKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEI 411 Query: 543 ERRIR 557 E RI+ Sbjct: 412 EERIK 416
>Q92JB2:NUOF_RICCN NADH-quinone oxidoreductase subunit F - Rickettsia conorii| Length = 421 Score = 287 bits (734), Expect = 4e-77 Identities = 133/185 (71%), Positives = 155/185 (83%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + NN+GTK++CISGHVNKPC VEE M I LKELIEK+ GGVRGGWDNL A+IPGGSSVPL Sbjct: 233 KPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPL 292 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 LPK +C+ V MD+D+L+ SGLGT ++VMD+STD++ AIARLS FY HESCGQCTPCR Sbjct: 293 LPKSLCE-VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCR 351 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+W +M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+ Sbjct: 352 EGTGWMWRVMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEI 411 Query: 543 ERRIR 557 E RI+ Sbjct: 412 EARIK 416
>O07948:NUOF_RHOCA NADH-quinone oxidoreductase subunit F - Rhodobacter capsulatus| (Rhodopseudomonas capsulata) Length = 431 Score = 287 bits (734), Expect = 4e-77 Identities = 128/187 (68%), Positives = 155/187 (82%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R NN+G KL+ +SGHVN PC VEE MSI +KELIEKH GGVRGGW NL AVIPGG+S P+ Sbjct: 234 RPNNTGVKLFAMSGHVNTPCVVEEAMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPV 293 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +P H+C+D +MDYD ++ QS GTA ++VMD+ TD++ AIARLS F+KHESCGQCTPCR Sbjct: 294 IPAHLCEDAIMDYDGMREKQSSFGTACLIVMDQQTDIIKAIARLSKFFKHESCGQCTPCR 353 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGT W+W +MERL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+ Sbjct: 354 EGTSWMWRVMERLVTGEAEVEEIDMLFSVTKQVEGHTICALGDAAAWPIQGLIRHYREEI 413 Query: 543 ERRIRDR 563 E RI+ R Sbjct: 414 EDRIKAR 420
>P29913:NQO1_PARDE NADH-quinone oxidoreductase chain 1 - Paracoccus denitrificans| Length = 431 Score = 272 bits (696), Expect = 1e-72 Identities = 125/185 (67%), Positives = 155/185 (83%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 R NN+G KL+ ++GHVN PC VEE MSIP++ELIEKH GG+RGGW NL AVIPGG+S P+ Sbjct: 234 RPNNAGVKLFGLTGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWKNLKAVIPGGASCPV 293 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 L C++ +MDYD ++ V+S GTA ++VMD+STDVV AI RLS F+KHESCGQCTPCR Sbjct: 294 LTAEQCENAIMDYDGMRDVRSSFGTACMIVMDQSTDVVKAIWRLSKFFKHESCGQCTPCR 353 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGTGW+ +MERL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+ Sbjct: 354 EGTGWMMRVMERLVRGDAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEI 413 Query: 543 ERRIR 557 E RI+ Sbjct: 414 EDRIK 418
>P65567:NUOF_MYCTU NADH-quinone oxidoreductase subunit F - Mycobacterium tuberculosis| Length = 445 Score = 157 bits (398), Expect = 4e-38 Identities = 87/179 (48%), Positives = 115/179 (64%), Gaps = 1/179 (0%) Frame = +3 Query: 6 KNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLL 185 + + G LY +SGHV +P E + I L+EL++ + GGVR G L PGGSS PLL Sbjct: 245 EKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLL 302 Query: 186 P-KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +H+ DV +DY+ + A S LGT A+ + D++T VV A+ R + FYKHESCG+CTPCR Sbjct: 303 TDEHL--DVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 539 EGT WL I ERL+ G E+ID L +++ I G + CALGD AA PV I+HFR E Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDE 419
>P65568:NUOF_MYCBO NADH-quinone oxidoreductase subunit F - Mycobacterium bovis| Length = 445 Score = 157 bits (398), Expect = 4e-38 Identities = 87/179 (48%), Positives = 115/179 (64%), Gaps = 1/179 (0%) Frame = +3 Query: 6 KNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLL 185 + + G LY +SGHV +P E + I L+EL++ + GGVR G L PGGSS PLL Sbjct: 245 EKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLL 302 Query: 186 P-KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +H+ DV +DY+ + A S LGT A+ + D++T VV A+ R + FYKHESCG+CTPCR Sbjct: 303 TDEHL--DVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 539 EGT WL I ERL+ G E+ID L +++ I G + CALGD AA PV I+HFR E Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDE 419
>P56913:NUOF2_RHIME NADH-quinone oxidoreductase subunit F 2 - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 421 Score = 157 bits (398), Expect = 4e-38 Identities = 81/182 (44%), Positives = 115/182 (63%) Frame = +3 Query: 18 GTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 197 G KLYC+SG V KP E M I L+EL+E+H GG G + AVIPGG S P++P+ Sbjct: 237 GPKLYCLSGQVRKPGLYELPMGISLRELVEEHAGGPLPG-RKVKAVIPGGVSAPVIPEGE 295 Query: 198 CDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 377 + V MD+D+L A S LG+A V+V+D ST +V R+ F+ HESCG+CTPCREG W Sbjct: 296 LE-VGMDFDSLTAAGSMLGSAGVVVIDDSTCMVKLATRIIEFFHHESCGKCTPCREGLDW 354 Query: 378 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 557 ++ R++ G + +++ L+ + K I G+T CALGD AA ++ ++HFR E I Sbjct: 355 TVKVLRRIEAGEGETGDLEQLEMLCKGIFGNTFCALGDGAAMGLRAALKHFRAEFVAHIE 414 Query: 558 DR 563 +R Sbjct: 415 ER 416
>Q9XAQ9:NUOF_STRCO NADH-quinone oxidoreductase subunit F - Streptomyces coelicolor| Length = 449 Score = 142 bits (358), Expect = 2e-33 Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 1/187 (0%) Frame = +3 Query: 6 KNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLL 185 + + G LY +SGHV P E + I L++L++ GG+R G L PGGSS P+ Sbjct: 247 EKSPGFTLYSLSGHVAGPGQYEAPLGITLRQLLDMS-GGMRPG-HRLKFWTPGGSSTPMF 304 Query: 186 P-KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 +H+ DV +DY+ + A S LGT A+ D++T VV A+ R + FY HESCG+CTPCR Sbjct: 305 TDEHL--DVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCR 362 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 EGT WL ++ ++ G ++ ++D L ++ I G + CALGD AA P+ +++FR E Sbjct: 363 EGTYWLVQLLRDIEAGKGQMSDLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEY 422 Query: 543 ERRIRDR 563 E I R Sbjct: 423 EEHITGR 429
>Q56222:NQO1_THET8 NADH-quinone oxidoreductase subunit 1 - Thermus thermophilus| (strain HB8 / ATCC 27634 / DSM 579) Length = 438 Score = 133 bits (335), Expect = 8e-31 Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 4/190 (2%) Frame = +3 Query: 6 KNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLL 185 + + G KLY ISG V +P E M +ELI + GG + + A+IPGGSS P L Sbjct: 244 EQSKGMKLYQISGPVKRPGVYELPMGTTFRELIYEWAGGPL---EPIQAIIPGGSSTPPL 300 Query: 186 PKHICDDVL---MDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTP 356 P ++VL M Y+ L+A S LGT V+++ + +VDA+ L+ FY HESCG+CTP Sbjct: 301 P--FTEEVLDTPMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKCTP 358 Query: 357 CREG-TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 533 CREG G++ + ++ G + ++++ L+ + IEG + C L DAA WPV+G +RHF+ Sbjct: 359 CREGVAGFMVNLFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAAVWPVKGSLRHFK 418 Query: 534 PELERRIRDR 563 + R++ Sbjct: 419 DQYLALAREK 428
>Q89AU2:NUOF_BUCBP NADH-quinone oxidoreductase subunit F - Buchnera aphidicola subsp.| Baizongia pistaciae Length = 444 Score = 110 bits (275), Expect = 7e-24 Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 2/180 (1%) Frame = +3 Query: 12 NSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP-LLP 188 ++GTK+ SG V P E I +E+ E++ GG++ L PGG+S L+ Sbjct: 247 DTGTKMMGFSGSVKFPGIWELPFGITAREIFERYAGGMKNN-KKLKVWQPGGASTSFLID 305 Query: 189 KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 368 KH+ DV MD+ +K V S LGTA M +D S +V + + F+ ESCG CTPCR+G Sbjct: 306 KHL--DVPMDFVNIKKVGSRLGTALAMAVDDSVSIVSLVRNIEEFFSRESCGFCTPCRDG 363 Query: 369 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELE 545 W+ I++ L+ E+I++L+++ +Q+ G T CA A P++ +++FR E E Sbjct: 364 LPWIVKILKVLEQKIGVPEDIEILEQLCEQLGPGRTFCAHAPGAIEPLKSALKYFRLEFE 423
>P57256:NUOF_BUCAI NADH-quinone oxidoreductase subunit F - Buchnera aphidicola subsp.| Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 444 Score = 107 bits (268), Expect = 4e-23 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP- 179 + +++GTKL SG+V P E +E++E + G++ G+ +L A PGG+ Sbjct: 243 KSSDTGTKLMGFSGNVRNPGVWELPFGTTAREILEDYAHGMKSGF-SLKAWQPGGAGTDF 301 Query: 180 LLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPC 359 LL +H+ D+ MD+ + S LGTA M +D T +V + + F+ ESCG CTPC Sbjct: 302 LLEEHL--DLPMDFKNISQAGSRLGTALSMAVDNKTSMVSLVYNIEKFFSRESCGLCTPC 359 Query: 360 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQGLIRHFRP 536 R+G W+ I++ L+ ++ L+++ + G T CA A P+Q I++FR Sbjct: 360 RDGLPWIVKILKSLEQNKGHKNDVKNLEKLCSHLSPGKTFCAHAPGAIEPLQSAIKYFRS 419 Query: 537 ELERRIRDR 563 E E I R Sbjct: 420 EFESGINIR 428
>Q8K9Y3:NUOF_BUCAP NADH-quinone oxidoreductase subunit F - Buchnera aphidicola subsp.| Schizaphis graminum Length = 447 Score = 107 bits (266), Expect = 8e-23 Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Frame = +3 Query: 9 NNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP-LL 185 + +GTKL SG VN P E +E++E + G++ G L + PGG+ L+ Sbjct: 244 DTTGTKLMGFSGKVNNPGVWELPFGTTAREILEDYARGMKSGLF-LKSWQPGGAGTDFLI 302 Query: 186 PKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 365 KH+ D+ MD+ ++ S LGTA M +D T+++ + + F+ ESCG CTPCRE Sbjct: 303 EKHL--DLPMDFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKFFSRESCGLCTPCRE 360 Query: 366 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQGLIRHFRPEL 542 G W+ I+E L+ ++ L+ + + G T CA A P+Q I++FR E Sbjct: 361 GLPWIVKILESLEKKEGHKNDVKNLERLCLDLSPGKTFCAHAPGAVEPLQSAIKYFRLEF 420 Query: 543 ERRI 554 E I Sbjct: 421 EAGI 424
>P31979:NUOF_ECOLI NADH-quinone oxidoreductase subunit F - Escherichia coli| Length = 445 Score = 106 bits (265), Expect = 1e-22 Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 2/187 (1%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + ++GTKL SG V P E +E++E + GG+R G A PGG+ Sbjct: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDF 299 Query: 183 LPK-HICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPC 359 L + H+ D+ M+++++ S LGTA M +D ++V + L F+ ESCG CTPC Sbjct: 300 LTEAHL--DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 Query: 360 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRP 536 R+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q I++FR Sbjct: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 Query: 537 ELERRIR 557 E E I+ Sbjct: 418 EFEAGIK 424
>P33901:NUOF_SALTY NADH-quinone oxidoreductase subunit F - Salmonella typhimurium| Length = 445 Score = 105 bits (263), Expect = 2e-22 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 2/187 (1%) Frame = +3 Query: 3 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 182 + ++GTKL SG V P E +E++E + GG+R G A PGG+ Sbjct: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDF 299 Query: 183 LPK-HICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPC 359 L + H+ D+ M+++++ S LGTA M +D +V + L F+ ESCG CTPC Sbjct: 300 LTEAHL--DLPMEFESIGKAGSRLGTALAMAVDHEIGMVSLVRNLEEFFARESCGWCTPC 357 Query: 360 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRP 536 R+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q I++FR Sbjct: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 Query: 537 ELERRIR 557 E E I+ Sbjct: 418 EFEAGIK 424
>Q9I0J7:NUOF_PSEAE NADH-quinone oxidoreductase subunit F - Pseudomonas aeruginosa| Length = 448 Score = 100 bits (249), Expect = 7e-21 Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 2/181 (1%) Frame = +3 Query: 18 GTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP-LLPKH 194 GTKL SG V P E + +EL E + GG+R G+ L A PGG+ LLP+H Sbjct: 256 GTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQ-LKAWQPGGAGTGFLLPEH 314 Query: 195 ICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTG 374 + D M + V + +GT M +D S ++V + + F+ ESCG CTPCR+G Sbjct: 315 L--DAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLP 372 Query: 375 WLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERR 551 W ++ L+ G + +++ L+++ + G T CA A P+ +++FR E E Sbjct: 373 WSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEAG 432 Query: 552 I 554 I Sbjct: 433 I 433
>O66841:NUOF_AQUAE NADH-quinone oxidoreductase subunit F - Aquifex aeolicus| Length = 426 Score = 92.8 bits (229), Expect = 1e-18 Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Frame = +3 Query: 15 SGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGG----SSVPL 182 +G KL+ +SG V KP E M+ L+E+I K+ GG G + AV G SS L Sbjct: 247 AGPKLFPVSGKVKKPGVYELPMNTTLREVIFKYAGGTLGN-KKVKAVFSGALDCFSSEEL 305 Query: 183 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 362 D+ MDY L GT V+V+ + D+V+A +++ FY+HE+CGQCTPCR Sbjct: 306 -------DIPMDYSPLGFG----GTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCTPCR 354 Query: 363 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 G ++E++ G A ++ + V + I+ +IC LG A ++ + F E Sbjct: 355 VGCYEQANLLEKIYKGEATEQDWEGFDFVNRNIQPTSICGLGAVAGRLIRQTLEKFPEEW 414 Query: 543 ER 548 E+ Sbjct: 415 EK 416
>P22317:HOXF_RALEH NAD-reducing hydrogenase hoxS subunit alpha - Ralstonia eutropha| (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)) Length = 602 Score = 53.5 bits (127), Expect = 1e-06 Identities = 43/178 (24%), Positives = 75/178 (42%) Frame = +3 Query: 9 NNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLP 188 +++GT+L ++G +KP E E + L E++ + G D I G P Sbjct: 401 DSAGTRLLSVAGDCSKPGIYEVEWGVTLNEVL-----AMVGARDARAVQISG-------P 448 Query: 189 KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 368 C V D + A + A + + D+++ + F+ ESCG C PCR G Sbjct: 449 SGECVSVAKDGERKLAYEDLSCNGAFTIFNCKRDLLEIVRDHMQFFVEESCGICVPCRAG 508 Query: 369 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 542 L +E + G A +++D + + + C LG + P+ + F PE+ Sbjct: 509 NVDLHRKVEWVIAGKACQKDLDDMVSWGALVRRTSRCGLGATSPKPILTTLEKF-PEI 565
>Q8UAW0:UXUA1_AGRT5 Mannonate dehydratase 1 - Agrobacterium tumefaciens (strain C58 /| ATCC 33970) Length = 402 Score = 33.1 bits (74), Expect = 1.4 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = +3 Query: 378 LWMIMERLK----VGNAKLEE--IDMLQEVTKQIE--GHTICALGDAAAWPVQGLIRHFR 533 L ++E+L+ + +L++ ID L EVT E G ICA GD WP+ GL R Sbjct: 190 LAQLLEKLRSYHGINRGRLQQNLIDFLSEVTPVAEEVGINICAHGDDPPWPLLGLPRILS 249 Query: 534 PELE 545 E + Sbjct: 250 TEAD 253
>Q28377:FINC_HORSE Fibronectin - Equus caballus (Horse)| Length = 522 Score = 32.3 bits (72), Expect = 2.4 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -1 Query: 271 TITAAVPNPDCTAFSAS*SINTSSHMCFGKRGTDEPPGITASRLSHPPLTPPQCFSINS 95 TIT P + T + N S G+R TDEPP + L HP L P+ + S Sbjct: 172 TITGLEPGTEYTIQVIAIKNNQKSEPLIGRRKTDEPPQLVT--LPHPNLHGPEILDVPS 228
>Q7U5Q9:DDL_SYNPX D-alanine--D-alanine ligase - Synechococcus sp. (strain WH8102)| Length = 353 Score = 31.6 bits (70), Expect = 4.0 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = +3 Query: 207 VLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPC 359 V MD A+KA +G G A V + D + AR K G C PC Sbjct: 133 VSMDKQAMKAALAGAGLAQVPYVCAQADELSDAARQEALLKRIESGLCYPC 183
>Q1GGK7:PUR5_SILST Phosphoribosylformylglycinamidine cyclo-ligase - Silicibacter sp.| (strain TM1040) Length = 348 Score = 30.4 bits (67), Expect = 9.0 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +3 Query: 72 EEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 224 E + P + +++ VR G N LA I GG LP+ + DD+ D D Sbjct: 222 EALLTPTRLYVKQSLAAVRAGGVNALAHITGGGLTENLPRVLPDDLGADID 272 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 155,104,857 Number of extensions: 3575976 Number of successful extensions: 8979 Number of sequences better than 10.0: 34 Number of HSP's gapped: 8950 Number of HSP's successfully gapped: 34 Length of query: 279 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 167 Effective length of database: 69,965,399 Effective search space: 11684221633 Effective search space used: 11684221633 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
