ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf7e13 |
|---|---|
| Clone Library Name | barley_pub |
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 108 bits (270), Expect = 4e-23 Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 22/204 (10%) Frame = +2 Query: 239 ETEADAEDEEPVGPKT-----------RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM 385 E AE+EE + K RL N+P+ +T + +F + GTV +VE+ Sbjct: 88 EVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVY 147 Query: 386 HS-SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAK-PKKKQPAVPSAPVEK 559 + ++RG AFVTMGS EEA A++ + S + RT+KV+F + P+ + V SA + Sbjct: 148 DRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRS 207 Query: 560 ---------NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFS 712 + ++V NL+W + S+ LR+ FA PG S +VI+ ++ RS G+GF++FS Sbjct: 208 TYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSS-GRSRGFGFITFS 266 Query: 713 SKEEAEAAISTFNGKELMGRSINV 784 S E +A+ T N EL GR + + Sbjct: 267 SAEAMNSALDTMNEVELEGRPLRL 290 Score = 66.2 bits (160), Expect = 2e-10 Identities = 36/93 (38%), Positives = 56/93 (60%) Frame = +2 Query: 518 KKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYG 697 ++K+ V S VE ++VGNL + + S L E+FA V +VE+++ T R S G+ Sbjct: 100 EEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDR-SRGFA 158 Query: 698 FVSFSSKEEAEAAISTFNGKELMGRSINVMFKE 796 FV+ S EEA+ AI F+G ++ GR++ V F E Sbjct: 159 FVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPE 191 Score = 40.4 bits (93), Expect = 0.014 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L N+ W +T +R F Q + ++ SS ++RG F+T S E SAL Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277 Query: 464 LNLSTLNDRTIKVDFA---KPKKKQPAVPSAP 550 +N L R ++++ A P P V ++P Sbjct: 278 MNEVELEGRPLRLNVAGQKAPVSSPPVVETSP 309
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 106 bits (264), Expect = 2e-22 Identities = 67/196 (34%), Positives = 108/196 (55%), Gaps = 4/196 (2%) Frame = +2 Query: 239 ETEADAEDEEPVGPK--TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRG 409 E EAD E+EE P +L N+P+DV + + LFE+ G V E+ + + ++RG Sbjct: 119 EVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRG 178 Query: 410 LAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVGNLT 586 FVTM + EEA A++ N +N R + V+ A + ++P P E++ ++VGN+ Sbjct: 179 FGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIP 238 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM 766 W + L +LF+ V S V++ T R S G+GFV+ +S+ E AI+ +G+ L Sbjct: 239 WGIDDARLEQLFSEHGKVVSARVVYDRETGR-SRGFGFVTMASEAEMSDAIANLDGQSLD 297 Query: 767 GRSINVMFKEDTPKKN 814 GR+I V ED ++N Sbjct: 298 GRTIRVNVAEDRSRRN 313
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 100 bits (248), Expect = 1e-20 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 2/188 (1%) Frame = +2 Query: 254 AEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMG 430 AE EP + +L N+ +DV + +LFE+ GTV E+ + + ++RG FVTM Sbjct: 141 AEFPEP-SEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS 199 Query: 431 SEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPA-VPSAPVEKNVVFVGNLTWRVRSRH 607 S +EA +A++ N LN R + V+ A P+ +P P V+VGNL W V + Sbjct: 200 SVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGR 259 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVM 787 L +LF+ V V++ T R S G+GFV+ S +E AIS +G+ L GR+I V Sbjct: 260 LEQLFSEHGKVVEARVVYDRETGR-SRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318 Query: 788 FKEDTPKK 811 E+ P + Sbjct: 319 VAEERPPR 326
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 96.3 bits (238), Expect = 2e-19 Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 2/190 (1%) Frame = +2 Query: 251 DAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTM 427 + E+ + +L N+P+D+ + + LF++ G V E+ + + ++RG FVTM Sbjct: 86 ETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTM 145 Query: 428 GSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPA-VPSAPVEKNVVFVGNLTWRVRSR 604 + EEA A++ + LN R + V+ A P+ +P P ++VGN+ W + Sbjct: 146 STVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDA 205 Query: 605 HLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 L ++F+ V S V+F + R S G+GFV+ SS+ E AI+ +G+ L GR+I V Sbjct: 206 RLEQVFSEHGKVVSARVVFDRESGR-SRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRV 264 Query: 785 MFKEDTPKKN 814 E+ P++N Sbjct: 265 NAAEERPRRN 274
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 95.9 bits (237), Expect = 3e-19 Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 2/179 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSAL 457 + +L N+P+DV + + +F+ G V E+ + + ++RG FVTM + EEA A+ Sbjct: 54 EAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 113 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVGNLTWRVRSRHLRELFASTP 634 + LN ++ R + V+ A P+ P E + V+VGNL W V + L +LF+ Sbjct: 114 ELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHG 173 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 V S V+ T R S G+GFV+ SS+ E AI+ +G+ L GR++ V E+ P++ Sbjct: 174 KVVSARVVSDRETGR-SRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 231 Score = 60.1 bits (144), Expect = 2e-08 Identities = 34/81 (41%), Positives = 49/81 (60%) Frame = +2 Query: 542 SAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKE 721 S P E+ +FVGNL + V S L +F + V+ EVI++ T R S G+GFV+ S+ E Sbjct: 49 SEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDR-SRGFGFVTMSTVE 107 Query: 722 EAEAAISTFNGKELMGRSINV 784 EAE A+ NG ++ GR + V Sbjct: 108 EAEKAVELLNGYDMDGRQLTV 128 Score = 55.8 bits (133), Expect = 3e-07 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSA 454 P R+ N+PWDV + LF + G VV +S + ++RG FVTM SE E A Sbjct: 147 PSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDA 206 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQ 529 + L+ TL+ R ++V+ A+ + ++ Sbjct: 207 IAALDGQTLDGRAVRVNVAEERPRR 231
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 91.7 bits (226), Expect = 5e-18 Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 9/243 (3%) Frame = +2 Query: 116 YSAPPRHSHISFAVPAAARSSGHRLXXXXXXXXXXXXXXXXETEADAEDEEPVGPKTRLI 295 +S PP ++S + ++ SS R + + E+E P ++ Sbjct: 33 FSLPPSSLNLSLSSSSSCFSS--RFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIF 90 Query: 296 AMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNL 472 N+P+ + LFE+ G V VE+ + ++RG FVTM S+EE +A + N Sbjct: 91 VGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNG 150 Query: 473 STLNDRTIKVDFAKPKKKQPAVPSAPVEK--------NVVFVGNLTWRVRSRHLRELFAS 628 L+ R ++V+ P +K+ + N V+VGNL W V L LF+ Sbjct: 151 YELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSE 210 Query: 629 TPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 V +V++ + R S G+GFV++SS EE AI + +G +L GR+I V E P Sbjct: 211 QGKVVDAKVVYDRDSGR-SRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPP 269 Query: 809 KNK 817 + + Sbjct: 270 RRQ 272 Score = 67.4 bits (163), Expect = 1e-10 Identities = 40/85 (47%), Positives = 49/85 (57%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FVGNL + S L ELF V+ VEVI+ T R S G+GFV+ SSKEE EAA Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGR-SRGFGFVTMSSKEEVEAACQQ 147 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 FNG EL GR++ V K+ S Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENS 172
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 89.0 bits (219), Expect = 3e-17 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 15/249 (6%) Frame = +2 Query: 116 YSAPPRHSHISFAVPAAARSSGHRLXXXXXXXXXXXXXXXXETEADAEDEEPVGPKTRLI 295 +S PP ++S + P++ SS R + + E+E P ++ Sbjct: 33 FSLPPSSLNLSLSSPSSCFSS--RFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIF 90 Query: 296 AMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNL 472 N+ + + LFE+ G V VE+ + ++RG FVTM S+EE +A + N Sbjct: 91 VGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNG 150 Query: 473 STLNDRTIKVDFAKPKKKQPAVP--------------SAPVEKNVVFVGNLTWRVRSRHL 610 L+ R ++V+ P +K+ + N V+VGNL W V L Sbjct: 151 YELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDAL 210 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 LF+ V +V++ + R S G+GFV++SS EE AI + +G +L GR+I V Sbjct: 211 ETLFSEQGKVVDAKVVYDRDSGR-SRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSP 269 Query: 791 KEDTPKKNK 817 E P + + Sbjct: 270 AEARPPRRQ 278 Score = 67.4 bits (163), Expect = 1e-10 Identities = 40/85 (47%), Positives = 49/85 (57%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FVGNL + S L ELF V+ VEVI+ T R S G+GFV+ SSKEE EAA Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGR-SRGFGFVTMSSKEEVEAACQQ 147 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 FNG EL GR++ V K+ S Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENS 172
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 85.9 bits (211), Expect = 3e-16 Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 28/219 (12%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLA 415 E + + ++ +L N+P+ V + LFE+ G V VE+ S ++RG Sbjct: 73 EDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFG 132 Query: 416 FVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQP--------------------- 532 FVTM ++EE +A + N ++ R I+V+ K+ Sbjct: 133 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGN 192 Query: 533 -----AVPSAPVEK-NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 A V+ N V+VGNL+W V L+ELF+ V +V++ + R S G+ Sbjct: 193 SSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGR-SRGF 251 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 GFV++SS +E AI + NG +L GRSI V E+ P++ Sbjct: 252 GFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRR 290
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 85.5 bits (210), Expect = 4e-16 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLA 415 E + + ++ +L N+P+ V + LFE+ G V VE+ + ++RG Sbjct: 72 EDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFG 131 Query: 416 FVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQP--------------------- 532 FVTM ++EE +A + N ++ R I+V+ K+ Sbjct: 132 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGN 191 Query: 533 -----AVPSAPVEK-NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 A V+ N V+VGNL+W V L+ELF+ V +V++ + R S G+ Sbjct: 192 SSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGR-SRGF 250 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 GFV++SS +E AI + NG +L GRSI V E+ P++ Sbjct: 251 GFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRR 289
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 82.8 bits (203), Expect = 2e-15 Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 21/260 (8%) Frame = +2 Query: 101 LRHPEYSAPPRHSHISFAVPAAARSSGHRLXXXXXXXXXXXXXXXXETEADAEDEEPVGP 280 L P S +SF++ A S R + E+ Sbjct: 30 LLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSA 89 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 +L N+P++V + LFE G V VE+ + ++RG FVTM S E +A Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149 Query: 458 KNLNLSTLNDRTIKVDFA-KPKKKQPAVPSAPVEK-------------------NVVFVG 577 + N L+ R ++V+ P K++ P N V+VG Sbjct: 150 QQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVG 209 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 NL+W V L LF+ V VI+ + RS G+GFV++ S +E + AI + +G Sbjct: 210 NLSWGVDDMALESLFSEQGKVVEARVIYDRDS-GRSKGFGFVTYDSSQEVQNAIKSLDGA 268 Query: 758 ELMGRSINVMFKEDTPKKNK 817 +L GR I V E P + + Sbjct: 269 DLDGRQIRVSEAEARPPRRQ 288
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 80.9 bits (198), Expect = 9e-15 Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 8/174 (4%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKN 463 RL NIP ++ D++R + E+ G + E+ S ++R FVTM + E+A + ++ Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-------VFVGNLTWRVRSRHLRELF 622 LN + + R IKV+ + + + + E + V++GNL V + L++ F Sbjct: 145 LNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELLKDFF 204 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + V +V T +S G+GFVSFSS+EE EAAI N L G+ I V Sbjct: 205 SEKGKVLGAKVQ-RTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRV 257
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 80.1 bits (196), Expect = 2e-14 Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 1/182 (0%) Frame = +2 Query: 254 AEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGS 433 AE+++ +T L NIP+ T ++++ +FE D+ + N+G+A+V + Sbjct: 316 AENKKERDSRT-LFVKNIPYSTTVEELQEIFEN---AKDIRIPTGKDGSNKGIAYVEFSN 371 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPV-EKNVVFVGNLTWRVRSRHL 610 E+EA AL+ + + R+I VDF K + P + V+ V NL++ L Sbjct: 372 EDEANKALEEKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSATEDSL 431 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 RE+F ++ + R+ G+ F+ FSS E+A+ A+ + N E+ GRSI + F Sbjct: 432 REVFEKATSIRIPQ------NQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEF 485 Query: 791 KE 796 + Sbjct: 486 SQ 487 Score = 34.3 bits (77), Expect = 1.0 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%) Frame = +2 Query: 509 AKPKKKQP-AVPSAPVEKN-------VVFVGNLT----WRVRSRHLRELFASTP-GVQSV 649 AK KK+ P +P A K +F+GNL + LRE F+ +Q + Sbjct: 208 AKRKKEMPKTIPEAKKTKTDTASEGLSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDI 267 Query: 650 EVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + S +G+V FSS+EE E A+ GK+++G + + Sbjct: 268 RI-------GNSKKFGYVDFSSEEEVEKALK-LTGKKILGTEVKI 304
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 77.4 bits (189), Expect = 1e-13 Identities = 55/166 (33%), Positives = 85/166 (51%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+ ++R LFEK GTVV+ ++ KN G FV M +E++ A++NL Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVV-----KNYG--FVHMETEQQGRDAIQNL 60 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 N TLN+ IKV+ AK ++ P+ P K +FVGNLT + R+ +RELF V Sbjct: 61 NGYTLNEFAIKVEAAKSRR----APNTPTTK--IFVGNLTDKTRAPEVRELFQKYGTVVE 114 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ YGFV + + AI NG+ + G+ + V Sbjct: 115 CDIV---------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKV 151 Score = 35.8 bits (81), Expect = 0.35 Identities = 23/88 (26%), Positives = 40/88 (45%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAF 418 + EA P P T++ N+ ++R LF+K GTVV+ ++ R F Sbjct: 71 KVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV-------RNYGF 123 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKV 502 V + + A+K LN ++ + +KV Sbjct: 124 VHLDCVGDVQDAIKELNGRVVDGQPLKV 151
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 74.7 bits (182), Expect = 7e-13 Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 1/175 (0%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L N+P+ VT D+++ +FE ++V L ++ ++G+A++ +E EA AL+ Sbjct: 373 LFVKNLPYRVTEDEMKNVFEN---ALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALEEKQ 429 Query: 470 LSTLNDRTIKVDFAKPKKKQPAVPSAPV-EKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + ++ R + +D+ K +Q + E + V NL++ L+ELF ++ Sbjct: 430 GTEVDGRAMVIDYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKKATSIKM 489 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 + R GY FV F + E+A+ A+++ N E+ GR+I + F + +K Sbjct: 490 PQ-----NNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQK 539 Score = 61.6 bits (148), Expect = 6e-09 Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 3/170 (1%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 LI N+ + + + ++ LF+K +++ ++ + +G AFV + E+A AL + N Sbjct: 463 LIVNNLSYAASEETLQELFKK---ATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCN 519 Query: 470 LSTLNDRTIKVDFAKP---KKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 + + R I+++F+ P K A + +FV L+ LRE F G Sbjct: 520 NTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLRESFE---GS 576 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 S ++ T S G+GFV FSS E+A+AA E+ G + + F Sbjct: 577 ISARIVTDRDTGS-SKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDF 625 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/77 (25%), Positives = 38/77 (49%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L + D T + +R FE G++ ++ + ++G FV S E+A +A + + Sbjct: 555 LFVRGLSEDTTEETLRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAME 612 Query: 470 LSTLNDRTIKVDFAKPK 520 ++ + +DFAKPK Sbjct: 613 DGEIDGNKVTLDFAKPK 629
>Q62826:HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M - Rattus norvegicus (Rat)| Length = 690 Score = 73.6 bits (179), Expect = 2e-12 Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLF-EKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 R NIP+DV ++ L EK G V VEL M + K+RG A V EE A + Sbjct: 71 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 130 Query: 464 LNLSTLNDRTIKV-DFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 LN +L+ R +KV + + + A+ A + VFV NL ++V + L+E+F+ V Sbjct: 131 LNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVV 190 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKE 796 +++ +S G G V+F EA AIS FNG+ L R ++V E Sbjct: 191 VRADIL--EDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDE 240
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 73.2 bits (178), Expect = 2e-12 Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 N+ +T D ++ F+ G + ++++ + + KN AFV +A AL+ LN + Sbjct: 81 NLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQI 140 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 + +K+++A ++ S+ + +FVG+L V LR F P S V++ Sbjct: 141 ENNIVKINWAFQSQQ-----SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMW 195 Query: 662 HTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGR--SINVMFKEDTPKKN 814 T S GYGFVSF+S+++A+ A+ + G++L GR IN K D N Sbjct: 196 DMQTGS-SRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNN 247
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 73.2 bits (178), Expect = 2e-12 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 11/191 (5%) Frame = +2 Query: 245 EADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVT 424 E D++ EE T L NI + T + + LF K G +V L + K +G FV Sbjct: 206 ERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVN 265 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAV-----------PSAPVEKNVVF 571 E+A+ A++ LN S LN + V A+ K ++ V A + +F Sbjct: 266 YEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLF 325 Query: 572 VGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 V NL V L E FA + S +V+ T +S G+GFV FS+ EEA AI+ N Sbjct: 326 VKNLDDSVDDEKLEEEFAPYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKN 383 Query: 752 GKELMGRSINV 784 + + G+ + V Sbjct: 384 QQIVAGKPLYV 394 Score = 44.3 bits (103), Expect = 0.001 Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 1/149 (0%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKP 517 +F G+V + + + +K + G A+V E A++ LN + + R ++ +++ Sbjct: 57 IFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQ- 115 Query: 518 KKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYG 697 + P++ +F+ NL + ++ L + F+ + S ++ T +S G+G Sbjct: 116 --RDPSLRKKG--SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIA--TDENGKSKGFG 169 Query: 698 FVSFSSKEEAEAAISTFNGKELMGRSINV 784 FV F + A+ AI NG L G+ I V Sbjct: 170 FVHFEEEGAAKEAIDALNGMLLNGQEIYV 198 Score = 32.0 bits (71), Expect = 5.0 Identities = 18/77 (23%), Positives = 33/77 (42%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L N+ V + + F GT+ ++ + K++G FV + EEA A+ N Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383 Query: 470 LSTLNDRTIKVDFAKPK 520 + + + V A+ K Sbjct: 384 QQIVAGKPLYVAIAQRK 400
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 72.8 bits (177), Expect = 3e-12 Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPV-EKNVVFVG 577 +RG FV ++E A A++ +N LNDR + V K ++++ A V E V++ Sbjct: 137 SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + + LRE+F++ SV+V+ T RS G+GFV++ + EEA+ A+S NGK Sbjct: 197 NFGEDMDDKRLREIFSAFGNTLSVKVMMDDTG--RSRGFGFVNYGNHEEAQKAVSEMNGK 254 Query: 758 ELMGRSINV 784 E+ GR I V Sbjct: 255 EVNGRMIYV 263 Score = 64.7 bits (156), Expect = 7e-10 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ +R +F G + V++ M + ++RG FV G+ EEA A+ Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSE 250 Query: 464 LNLSTLNDRTIKVDFAKP--------KKKQPAVPSAPVEKNV---VFVGNLTWRVRSRHL 610 +N +N R I V A+ K+K + + + ++V NL + L Sbjct: 251 MNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ T S G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPYGTITSAKVM---TEGGHSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 48.5 bits (114), Expect = 5e-05 Identities = 28/85 (32%), Positives = 44/85 (51%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VG+L V L E F+ + S+ V T RRS GY +++F +AE A+ T Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIAT-RRSLGYAYINFQQPADAERALDT 71 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 N + + GR I +M+ + P KS Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKS 96
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 72.0 bits (175), Expect = 4e-12 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 6/99 (6%) Frame = +2 Query: 542 SAPVEKNV------VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFV 703 SAPVE+N +FVGNL++ V S L +LF S V+ VEVI+ T R S G+GFV Sbjct: 87 SAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGR-SRGFGFV 145 Query: 704 SFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 + S+ E EAA FNG E GR + V PK+ +S Sbjct: 146 TMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREES 184 Score = 58.2 bits (139), Expect = 7e-08 Identities = 33/86 (38%), Positives = 47/86 (54%) Frame = +2 Query: 560 NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 N ++VGNL+W V L LF V VI+ + R S G+GFV+ SS +E + AI Sbjct: 257 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGR-SKGFGFVTLSSSQEVQKAI 315 Query: 740 STFNGKELMGRSINVMFKEDTPKKNK 817 ++ NG +L GR I V E P + + Sbjct: 316 NSLNGADLDGRQIRVSEAEARPPRGQ 341 Score = 47.4 bits (111), Expect = 1e-04 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALS 451 G RL N+ W V + LF +QG VV+ + S +++G FVT+ S +E Sbjct: 254 GSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 313 Query: 452 ALKNLNLSTLNDRTIKVDFAKPK 520 A+ +LN + L+ R I+V A+ + Sbjct: 314 AINSLNGADLDGRQIRVSEAEAR 336 Score = 42.7 bits (99), Expect = 0.003 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +2 Query: 248 ADAEDEEPV-----GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRG 409 AD +D PV P +L N+ ++V + LFE G V VE+ + ++RG Sbjct: 82 ADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRG 141 Query: 410 LAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQ 529 FVTM + E +A + N R ++V+ P K+ Sbjct: 142 FGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKR 181
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 70.9 bits (172), Expect = 1e-11 Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 12/192 (6%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKK----NR 406 E E + E+EE P L N+ +D T + ++ +F K GTV +S +K + Sbjct: 715 EEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSM 774 Query: 407 GLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK-------NV 565 G FV E+A ALK L ++ ++V ++ K PAV A ++ + Sbjct: 775 GFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATK-PAVTLARKKQVPRKQTTSK 833 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + V N+ ++ SR +RELF++ +++V + T G+GFV F +K++A+ A + Sbjct: 834 ILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNA 893 Query: 746 F-NGKELMGRSI 778 + L GR + Sbjct: 894 LCHSTHLYGRRL 905 Score = 48.5 bits (114), Expect = 5e-05 Identities = 32/88 (36%), Positives = 42/88 (47%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +RLI N+P + + R LF GT+ D L K R F+ SEEEA A K+ Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSA 547 N S ++ I V+F K PA P A Sbjct: 62 FNKSFIDTSRITVEFCK-SFGDPAKPRA 88 Score = 46.2 bits (108), Expect = 3e-04 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%) Frame = +2 Query: 257 EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGS 433 E+EE + RL N+P+ T +D+ LF K G + ++ + S +KK +G AF+T Sbjct: 393 EEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMF 452 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSA 547 E A+ A ++ R + V + KK+ SA Sbjct: 453 PEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASEDASA 490 Score = 45.4 bits (106), Expect = 4e-04 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Frame = +2 Query: 245 EADAEDEEPVGPKTRLIAMNI-----PWDVTPDDI-RVLFEKQGTVVDVELSMHSSKKNR 406 EA AE E+P K + P++VT ++ L + + + + H +K Sbjct: 276 EARAETEKPANQKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-- 333 Query: 407 GLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAP------------ 550 G FV +EEE ALK N + R I+V +K P AP Sbjct: 334 GYIFVDFSNEEEVKQALK-CNREYMGGRYIEV---FREKNVPTTKGAPKNTTKSWQGRIL 389 Query: 551 ---------VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFV 703 E +FV NL + L +LF+ + + + T ++ G+ F+ Sbjct: 390 GENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLT-KKPKGFAFI 448 Query: 704 SFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +F E A A S +G+ GR ++V+ T KK S Sbjct: 449 TFMFPEHAVKAYSEVDGQVFQGRMLHVL--PSTIKKEAS 485 Score = 31.6 bits (70), Expect = 6.5 Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + V NL ++ R+LFA+ + + F T + +GF+ F S+EEA+ A Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSLKF--TKDGKFRKFGFIGFKSEEEAQKAQKH 61 Query: 746 FNGKELMGRSINVMF 790 FN + I V F Sbjct: 62 FNKSFIDTSRITVEF 76
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 70.5 bits (171), Expect = 1e-11 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPV-EKNVVFVG 577 +RG FV + E A A++ +N LNDR + V K ++++ A V E V++ Sbjct: 137 SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + + LRE+F++ SV+V+ + RS G+GFV++ + EEA+ A+S NGK Sbjct: 197 NFGEDMDDKRLREIFSAFGNTLSVKVMMDDSG--RSRGFGFVNYGNHEEAQKAVSEMNGK 254 Query: 758 ELMGRSINV 784 E+ GR I V Sbjct: 255 EVNGRMIYV 263 Score = 65.1 bits (157), Expect = 5e-10 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ +R +F G + V++ M S ++RG FV G+ EEA A+ Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSE 250 Query: 464 LNLSTLNDRTIKVDFAKP--------KKKQPAVPSAPVEKNV---VFVGNLTWRVRSRHL 610 +N +N R I V A+ K+K + + + ++V NL + L Sbjct: 251 MNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F + S +V+ T S G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFLPYGTITSAKVM---TEGGHSKGFGFVCFSSPEEATKAVTEMNGR 356
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 68.9 bits (167), Expect = 4e-11 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPV-EKNVVFVG 577 +RG FV ++E A A++ +N LNDR + V K ++++ A V E V++ Sbjct: 137 SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + + L+E+F++ SV+V+ + RS G+GFV++ + EEA+ A++ NGK Sbjct: 197 NFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSG--RSRGFGFVNYGNHEEAQKAVTEMNGK 254 Query: 758 ELMGRSINV 784 E+ GR + V Sbjct: 255 EVNGRMVYV 263 Score = 64.3 bits (155), Expect = 9e-10 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ ++ +F G + V++ M +S ++RG FV G+ EEA A+ Sbjct: 191 TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTE 250 Query: 464 LNLSTLNDRTIKVDFAKP--------KKKQPAVPSAPVEKNV---VFVGNLTWRVRSRHL 610 +N +N R + V A+ K+K + + + ++V NL + L Sbjct: 251 MNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ T S G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPYGTITSTKVM---TEGGHSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 48.1 bits (113), Expect = 7e-05 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +++G+L V L E F+ + S+ V T RRS GY +++F +AE A+ T Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIAT-RRSLGYAYINFQQPADAERALDT 71 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 N + + GR I +M+ + P KS Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKS 96
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 68.2 bits (165), Expect = 6e-11 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 3/159 (1%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALK 460 T LI +P D+ ++ LF G + + + + + G FV GSE +AL A+ Sbjct: 78 TNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAIN 137 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 NLN T+ ++ IKV FA+P +Q + ++V NL+ + L +F + Sbjct: 138 NLNGITVRNKRIKVSFARPGGEQ-------LRDTNLYVTNLSRSITDEQLETIFGKYGQI 190 Query: 641 QSVEVI--FHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 ++ HT TPR G F+ F+ +EEA+ AIS N Sbjct: 191 VQKNILRDKHTGTPR---GVAFIRFNKREEAQEAISALN 226 Score = 35.0 bits (79), Expect = 0.59 Identities = 23/75 (30%), Positives = 36/75 (48%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + V L ++ R L LF + + + ++ T S GYGFV F S+ +A AI+ Sbjct: 80 LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGY-SYGYGFVDFGSEADALRAINN 138 Query: 746 FNGKELMGRSINVMF 790 NG + + I V F Sbjct: 139 LNGITVRNKRIKVSF 153
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 68.2 bits (165), Expect = 6e-11 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 1/170 (0%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P + L A ++ VT + LF+ VV V + ++++ G A++ + +A A+ Sbjct: 47 PNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAM 106 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVE-KNVVFVGNLTWRVRSRHLRELFASTP 634 + LN + L DR I++ + PS + K +F+ NL + ++ L E F+S Sbjct: 107 EALNYTPLFDRPIRIMLSNRD------PSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 160 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + S +V T RS GYGFV F +E A+AAI NG + + + V Sbjct: 161 TILSCKVAMDVTG--RSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFV 208 Score = 66.2 bits (160), Expect = 2e-10 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 12/185 (6%) Frame = +2 Query: 254 AEDEEPVGPK-TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMG 430 A DE P+ T + N+P ++ D++R F K G + + S +R FV Sbjct: 218 ARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFE 277 Query: 431 SEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV-----------FVG 577 E A SA++ +N +L D + V A+ K ++ E+ + ++ Sbjct: 278 CTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLK 337 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 NL V L+E+F+ V S +V+ + R G+GFV++S+ EEA A+S NGK Sbjct: 338 NLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSR--GFGFVAYSNPEEALRALSEMNGK 395 Query: 758 ELMGR 772 ++GR Sbjct: 396 -MIGR 399 Score = 45.1 bits (105), Expect = 6e-04 Identities = 30/110 (27%), Positives = 47/110 (42%) Frame = +2 Query: 491 TIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT 670 +++V + P V + ++ G+L +V HL +LF V SV V Sbjct: 26 SVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQN 85 Query: 671 TPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 RRS GY +++FS+ +A A+ N L R I +M P S Sbjct: 86 --RRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLS 133 Score = 38.1 bits (87), Expect = 0.070 Identities = 20/82 (24%), Positives = 40/82 (48%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L N+ V + ++ +F + G V ++ ++ +RG FV + EEAL AL +N Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393 Query: 470 LSTLNDRTIKVDFAKPKKKQPA 535 + + + + A+ K+ + A Sbjct: 394 GKMIGRKPLYIALAQRKEDRRA 415
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 68.2 bits (165), Expect = 6e-11 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 3/183 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 +T LI +P ++T D++R LF G V +L + + G FV + ++A A+ Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P S ++ +++ L + + + ++F+ Sbjct: 79 NTLNGLRLQSKTIKVSYARPS-------SEVIKDANLYISGLPRTMTQKDVEDMFSRFGR 131 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + V+ TT S G F+ F + EAE AI++FNG + G S I V F + P + Sbjct: 132 IINSRVLVDQTTGL-SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAAN-PNQ 189 Query: 812 NKS 820 NK+ Sbjct: 190 NKN 192 Score = 40.0 bits (92), Expect = 0.018 Identities = 26/82 (31%), Positives = 42/82 (51%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ NL L ++F V +V+VI T + G+GFV+ ++ EEA AI++ Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNT-NKCKGFGFVTMTNYEEAAMAIAS 304 Query: 746 FNGKELMGRSINVMFKEDTPKK 811 NG L + + V FK + K Sbjct: 305 LNGYRLGDKILQVSFKTNKSHK 326 Score = 35.0 bits (79), Expect = 0.59 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKNLNLST 478 N+ D + +F G V +V++ ++ K +G FVTM + EEA A+ +LN Sbjct: 250 NLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYR 309 Query: 479 LNDRTIKVDFAKPK 520 L D+ ++V F K Sbjct: 310 LGDKILQVSFKTNK 323
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 67.0 bits (162), Expect = 1e-10 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV ++E A A++ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L+ELF SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKELFGKFGPALSVKVM--TDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 EL G+ I V Sbjct: 255 ELNGKQIYV 263 Score = 62.8 bits (151), Expect = 3e-09 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ + ++ LF K G + V++ S K++G FV+ E+A A+ Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N LN + I V A+ K ++ E+ ++V NL + L Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPFGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 50.4 bits (119), Expect = 1e-05 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L V L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + G+ + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 67.0 bits (162), Expect = 1e-10 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKPKKKQPAVPSAPVEKNVVFVG 577 ++G FV ++E A A++ +N LNDR + V F K+++ + + E V++ Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L+ELF SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKELFGKFGPALSVKVM--TDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 EL G+ I V Sbjct: 255 ELNGKQIYV 263 Score = 63.2 bits (152), Expect = 2e-09 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 11/184 (5%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAF 418 + E +AE T + N D+ + ++ LF K G + V++ S K++G F Sbjct: 176 QKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGF 235 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV----------- 565 V+ E+A A+ +N LN + I V A+ K ++ E+ Sbjct: 236 VSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVN 295 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++V NL + LR+ F+ + S +V+ RS G+GFV FSS EEA A++ Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTE 352 Query: 746 FNGK 757 NG+ Sbjct: 353 MNGR 356 Score = 50.4 bits (119), Expect = 1e-05 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L V L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + G+ + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 65.9 bits (159), Expect = 3e-10 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV ++E A A++ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L++LF SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVM--TDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 EL G+ I V Sbjct: 255 ELNGKQIYV 263 Score = 62.4 bits (150), Expect = 3e-09 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ + ++ LF K G + V++ S K++G FV+ E+A A+ Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N LN + I V A+ K ++ E+ ++V NL + L Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPFGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 48.9 bits (115), Expect = 4e-05 Identities = 30/97 (30%), Positives = 48/97 (49%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + G+ + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 65.9 bits (159), Expect = 3e-10 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV ++E A A++ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L++LF SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVM--TDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 EL G+ I V Sbjct: 255 ELNGKQIYV 263 Score = 62.4 bits (150), Expect = 3e-09 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ + ++ LF K G + V++ S K++G FV+ E+A A+ Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N LN + I V A+ K ++ E+ ++V NL + L Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPFGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 50.4 bits (119), Expect = 1e-05 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L V L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + G+ + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 65.9 bits (159), Expect = 3e-10 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV ++E A A++ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L++LF SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVM--TDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 EL G+ I V Sbjct: 255 ELNGKQIYV 263 Score = 62.4 bits (150), Expect = 3e-09 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ + ++ LF K G + V++ S K++G FV+ E+A A+ Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N LN + I V A+ K ++ E+ ++V NL + L Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPFGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 50.4 bits (119), Expect = 1e-05 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L V L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + G+ + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 65.9 bits (159), Expect = 3e-10 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T D+ + LF G + +L + ++ G FV +A A+ Sbjct: 38 KTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + + +LF+ Sbjct: 98 NTLNGLKLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ +G + I V F + +K Sbjct: 151 IITSRILLDQATGV-SRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQK 209 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%) Frame = +2 Query: 530 PAVPSAPV---------EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR 682 PA+P+ P+ K + V L + + LF S ++S +++ T + Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ- 78 Query: 683 SAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 S GYGFV++S +A+ AI+T NG +L ++I V + Sbjct: 79 SLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 114 Score = 45.1 bits (105), Expect = 6e-04 Identities = 31/85 (36%), Positives = 48/85 (56%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FV NL+ L +LF V +V+VI TT + G+GFV+ ++ +EA AI++ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTT-NKCKGFGFVTMTNYDEAAMAIAS 344 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 NG L R + V FK T K++K+ Sbjct: 345 LNGYRLGERVLQVSFK--TSKQHKA 367
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 65.5 bits (158), Expect = 4e-10 Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 12/192 (6%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKK----NR 406 E E + E+EE P L N+ + T + ++ +F K G + +S +K + Sbjct: 707 EEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSM 766 Query: 407 GLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK-------NV 565 G FV E+A ALK L T++ ++V ++ K PA+ S ++ + Sbjct: 767 GFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATK-PALTSTRKKQVPKKQTTSK 825 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + V N+ ++ R +RELF++ +++V + T G+GFV F +K++A+ A + Sbjct: 826 ILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 885 Query: 746 F-NGKELMGRSI 778 + L GR + Sbjct: 886 LCHSTHLYGRRL 897 Score = 47.8 bits (112), Expect = 9e-05 Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 18/212 (8%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDD-IRVLFEKQGTVVDVELSMHSSKKNRGLA 415 + E +EP P T + P++VT + I L + + + + H +K G Sbjct: 279 KVEKPVSQKEPTTPYTVKLR-GAPFNVTEKNVIEFLAPLKPVAIRIVRNAHGNKT--GYV 335 Query: 416 FVTMGSEEEALSALKNLNLSTLNDRTIKVDFAK--PKKKQPAVPSAP------------- 550 FV + SEEE ALK N + R I+V K P + P + P Sbjct: 336 FVDLSSEEEVKKALK-CNRDYMGGRYIEVFREKQAPTARGPPKSTTPWQGRTLGENEEEE 394 Query: 551 --VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEE 724 + +FV NL++ L +LF++ + + + T ++ G+ FV+F E Sbjct: 395 DLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLT-KKPKGFAFVTFMFPEH 453 Query: 725 AEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 A A + +G+ GR ++V+ T KK S Sbjct: 454 AVKAYAEVDGQVFQGRMLHVL--PSTIKKEAS 483 Score = 46.6 bits (109), Expect = 2e-04 Identities = 27/77 (35%), Positives = 39/77 (50%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +RLI N+P + + R LF GT+ D L K R F+ SEEEA +AL + Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNH 61 Query: 464 LNLSTLNDRTIKVDFAK 514 + S ++ I V+F K Sbjct: 62 FHRSFIDTTRITVEFCK 78 Score = 33.9 bits (76), Expect = 1.3 Identities = 22/75 (29%), Positives = 38/75 (50%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + V NL ++ R+LFA+ + + F T + +GF+ F S+EEA+AA++ Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSLKF--TKDGKFRKFGFIGFKSEEEAQAALNH 61 Query: 746 FNGKELMGRSINVMF 790 F+ + I V F Sbjct: 62 FHRSFIDTTRITVEF 76
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 65.5 bits (158), Expect = 4e-10 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T D+ + LF G + +L + ++ G FV +A A+ Sbjct: 38 KTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + + +LF+ Sbjct: 98 NTLNGLKLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ +G + I V F + +K Sbjct: 151 IITSRILVDQVTGV-SRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQK 209 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 9/96 (9%) Frame = +2 Query: 530 PAVPSAPV---------EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR 682 PA+P+ P+ K + V L + + LF S ++S +++ T + Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ- 78 Query: 683 SAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 S GYGFV++S +A+ AI+T NG +L ++I V + Sbjct: 79 SLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 114 Score = 45.1 bits (105), Expect = 6e-04 Identities = 31/85 (36%), Positives = 48/85 (56%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FV NL+ L +LF V +V+VI TT + G+GFV+ ++ +EA AI++ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTT-NKCKGFGFVTMTNYDEAAMAIAS 344 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 NG L R + V FK T K++K+ Sbjct: 345 LNGYRLGERVLQVSFK--TSKQHKA 367
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 65.1 bits (157), Expect = 5e-10 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G AFV ++E A A++ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N V L+ELF+ SV+V+ +S G+GFVS+ E+A A+ NGK Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRDPNG--KSKGFGFVSYEKHEDANKAVEEMNGK 254 Query: 758 ELMGRSINV 784 E+ G+ I V Sbjct: 255 EISGKIIFV 263 Score = 60.8 bits (146), Expect = 1e-08 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 15/182 (8%) Frame = +2 Query: 257 EDEEPVGPK----TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVT 424 E E +G K T + N +V + ++ LF + G + V++ + K++G FV+ Sbjct: 178 EREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVS 237 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VF 571 E+A A++ +N ++ + I V A+ K ++ A E+ ++ Sbjct: 238 YEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLY 297 Query: 572 VGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 + NL + LR+ F+ + S +V+ RS G+GFV FSS EEA A++ N Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDG---RSKGFGFVCFSSPEEATKAVTEMN 354 Query: 752 GK 757 G+ Sbjct: 355 GR 356 Score = 47.4 bits (111), Expect = 1e-04 Identities = 29/85 (34%), Positives = 43/85 (50%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VG+L V L E F+ V S+ V T RRS GY +V+F +AE A+ T Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMIT-RRSLGYAYVNFQQPADAERALDT 71 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 N + G+ I +M+ + P KS Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKS 96
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 64.7 bits (156), Expect = 7e-10 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Frame = +2 Query: 257 EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGS 433 ++EE P T + + W + + ++ FE G V+ + + ++RG +V + Sbjct: 160 KNEETEEPATIFVG-RLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFEN 218 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPK--------KKQPAVPSAPVEKNVVFVGNLTW 589 + A A++ + ++ R I D + K KK PS P + +F+GNL++ Sbjct: 219 KSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEP--SDTLFLGNLSF 276 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMG 769 + ELFA V SV + H T + G+G+V FS+ E+A+ A+ G+ + Sbjct: 277 NADRDAIFELFAKHGEVVSVRIPTHPET-EQPKGFGYVQFSNMEDAKKALDALQGEYIDN 335 Query: 770 RSINVMFKEDTPKKN 814 R + + F P + Sbjct: 336 RPVRLDFSSPRPNND 350
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 64.3 bits (155), Expect = 9e-10 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 14/192 (7%) Frame = +2 Query: 266 EPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEA 445 +P T L N+ DV+ D +R F + G +V + ++ ++ RG AFV + E+A Sbjct: 195 KPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDA 254 Query: 446 LSALKNLNLSTLNDRTIKVDFAKPK-----------KKQPAVPSAPVEKNVVFVGNLTWR 592 A + +N + + + V A+ K K++ + + ++V N+ Sbjct: 255 RRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVA 314 Query: 593 VRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGR 772 V LR+ F+ + S +++ +S G+GFV FS+ EEA A+ TF+G+ G+ Sbjct: 315 VTEEELRKHFSQCGTITSTKLM--CDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGK 372 Query: 773 SINVMF---KED 799 + V KED Sbjct: 373 PLYVAIAQKKED 384 Score = 62.0 bits (149), Expect = 5e-09 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 1/162 (0%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 N+P VT ++ +F+K G +V +++ K+RG FV E+ A +A++ LN + + Sbjct: 118 NLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIV 177 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVGNLTWRVRSRHLRELFASTPGVQSVEVI 658 D+ I V K KK V P EK +++ NL V LRE FA + S+ + Sbjct: 178 ADKEIYV--GKFMKKTDRV--KPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIA 233 Query: 659 FHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 R GY FV+F + E+A A T NG + + + V Sbjct: 234 --KDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYV 273 Score = 43.5 bits (101), Expect = 0.002 Identities = 21/89 (23%), Positives = 45/89 (50%) Frame = +2 Query: 257 EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSE 436 E+++ + + + N+ VT +++R F + GT+ +L K++G FV + Sbjct: 295 EEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTP 354 Query: 437 EEALSALKNLNLSTLNDRTIKVDFAKPKK 523 EEA+ A+K + + + + V A+ K+ Sbjct: 355 EEAIDAVKTFHGQMFHGKPLYVAIAQKKE 383
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 64.3 bits (155), Expect = 9e-10 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++ R LF G + +L + ++ G FV ++A A+ Sbjct: 38 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 98 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 151 IITSRILVDQVTGV-SRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 209 Query: 812 N 814 + Sbjct: 210 S 210 Score = 42.4 bits (98), Expect = 0.004 Identities = 31/85 (36%), Positives = 46/85 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FV NL+ L +LF V +V+VI T + G+GFV+ ++ +EA AI++ Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT-NKCKGFGFVTMTNYDEAAMAIAS 350 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 NG L R + V FK T K +KS Sbjct: 351 LNGYRLGDRVLQVSFK--TNKAHKS 373
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 64.3 bits (155), Expect = 9e-10 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++ R LF G + +L + ++ G FV ++A A+ Sbjct: 50 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 109 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 110 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 163 IITSRILVDQVTGV-SRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 221 Query: 812 N 814 + Sbjct: 222 S 222 Score = 42.4 bits (98), Expect = 0.004 Identities = 31/85 (36%), Positives = 46/85 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FV NL+ L +LF V +V+VI T + G+GFV+ ++ +EA AI++ Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT-NKCKGFGFVTMTNYDEAAMAIAS 362 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 NG L R + V FK T K +KS Sbjct: 363 LNGYRLGDRVLQVSFK--TNKAHKS 385
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 64.3 bits (155), Expect = 9e-10 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++ R LF G + +L + ++ G FV ++A A+ Sbjct: 45 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 104 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 105 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 158 IITSRILVDQVTGV-SRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216 Query: 812 N 814 + Sbjct: 217 S 217 Score = 42.4 bits (98), Expect = 0.004 Identities = 31/85 (36%), Positives = 46/85 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FV NL+ L +LF V +V+VI T + G+GFV+ ++ +EA AI++ Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT-NKCKGFGFVTMTNYDEAAMAIAS 357 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 NG L R + V FK T K +KS Sbjct: 358 LNGYRLGDRVLQVSFK--TNKAHKS 380
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 63.5 bits (153), Expect = 2e-09 Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV ++E A A+ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L+E+F SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGDDMNDERLKEMFGKYGPALSVKVM--TDDNGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 ++ G+S+ V Sbjct: 255 DMNGKSMFV 263 Score = 59.3 bits (142), Expect = 3e-08 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ + ++ +F K G + V++ + K++G FV+ E+A A+ Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N +N +++ V A+ K ++ E+ ++V NL + L Sbjct: 251 MNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFLPFGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 52.4 bits (124), Expect = 4e-06 Identities = 32/97 (32%), Positives = 49/97 (50%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L V L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + GR + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKS 96
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 63.5 bits (153), Expect = 2e-09 Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 1/170 (0%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P + L ++ V + LF + V ++ + + ++ G A+V + E+A A+ Sbjct: 43 PNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAM 102 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVE-KNVVFVGNLTWRVRSRHLRELFASTP 634 ++LN + + DR I++ + PS + K VF+ NL + ++ L E F+S Sbjct: 103 ESLNYAPIRDRPIRIMLSNRD------PSTRLSGKGNVFIKNLDASIDNKALYETFSSFG 156 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + S +V RS GYGFV F +E A+AAI NG L + + V Sbjct: 157 TILSCKVAMDVVG--RSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFV 204 Score = 63.2 bits (152), Expect = 2e-09 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 11/174 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N+P ++T D+++ F K G + + S +R FV S E A A++ Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEK 284 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV-----------FVGNLTWRVRSRHL 610 +N +L + + V A+ K + E+ + ++ NL V L Sbjct: 285 MNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKL 344 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGR 772 +E+F+ V S +V+ ++ R G+GFV++S+ EEA A+ NGK ++GR Sbjct: 345 KEMFSEYGNVTSCKVMMNSQGLSR--GFGFVAYSNPEEALLAMKEMNGK-MIGR 395 Score = 44.3 bits (103), Expect = 0.001 Identities = 23/84 (27%), Positives = 44/84 (52%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 + L N+ V + ++ +F + G V ++ M+S +RG FV + EEAL A+K Sbjct: 328 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKE 387 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPA 535 +N + + + V A+ K+++ A Sbjct: 388 MNGKMIGRKPLYVALAQRKEERQA 411
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 63.5 bits (153), Expect = 2e-09 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK--------------KNRGLAF 418 +T LI +P +T D+IR LF G + V+L S+ ++ G F Sbjct: 184 RTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGF 243 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVR 598 V ++A A+ LN L ++TIKV FA+P S ++ ++V L + Sbjct: 244 VNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPS-------SDAIKGANLYVSGLPKTMT 296 Query: 599 SRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNG 754 + L +FA + + ++ + ++ G GF+ F +EEA AI NG Sbjct: 297 QQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348 Score = 49.7 bits (117), Expect = 2e-05 Identities = 54/235 (22%), Positives = 88/235 (37%), Gaps = 62/235 (26%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK--KNRGLAFVTMGSEEEALSALKN 463 L +P +T ++ +F G ++ + ++ + +G+ F+ EEA A+ Sbjct: 286 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 345 Query: 464 LNLSTLNDRT--IKVDFAKP-----KKKQPAVPS---------------APVEKNV---- 565 LN +T + T I V F+ K QP +P+ PV K + Sbjct: 346 LNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFS 405 Query: 566 ----------------------------------VFVGNLTWRVRSRHLRELFASTPGVQ 643 +F+ NL L +LF VQ Sbjct: 406 PMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQ 465 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 SV+++ TT + GYGFVS ++ +EA AI NG + R + V FK + K Sbjct: 466 SVKIVKDPTT-NQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNKAK 519 Score = 40.4 bits (93), Expect = 0.014 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 12/87 (13%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVI----------FHTTTPRR--SAGYGFVSF 709 + V L + +R LF+S ++SV++I + P + S GYGFV++ Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMF 790 ++AE A++ NG L ++I V F Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVSF 273
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 63.5 bits (153), Expect = 2e-09 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK--------------KNRGLAF 418 +T LI +P +T D+IR LF G + V+L S+ ++ G F Sbjct: 148 RTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGF 207 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVR 598 V ++A A+ LN L ++TIKV FA+P S ++ ++V L + Sbjct: 208 VNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPS-------SDAIKGANLYVSGLPKTMT 260 Query: 599 SRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNG 754 + L +FA + + ++ + ++ G GF+ F +EEA AI NG Sbjct: 261 QQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312 Score = 49.7 bits (117), Expect = 2e-05 Identities = 54/235 (22%), Positives = 88/235 (37%), Gaps = 62/235 (26%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK--KNRGLAFVTMGSEEEALSALKN 463 L +P +T ++ +F G ++ + ++ + +G+ F+ EEA A+ Sbjct: 250 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 309 Query: 464 LNLSTLNDRT--IKVDFAKP-----KKKQPAVPS---------------APVEKNV---- 565 LN +T + T I V F+ K QP +P+ PV K + Sbjct: 310 LNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFS 369 Query: 566 ----------------------------------VFVGNLTWRVRSRHLRELFASTPGVQ 643 +F+ NL L +LF VQ Sbjct: 370 PMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQ 429 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 SV+++ TT + GYGFVS ++ +EA AI NG + R + V FK + K Sbjct: 430 SVKIVKDPTT-NQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNKAK 483 Score = 40.4 bits (93), Expect = 0.014 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 12/87 (13%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVI----------FHTTTPRR--SAGYGFVSF 709 + V L + +R LF+S ++SV++I + P + S GYGFV++ Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMF 790 ++AE A++ NG L ++I V F Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKVSF 237
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 63.2 bits (152), Expect = 2e-09 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 3/180 (1%) Frame = +2 Query: 272 VGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKN-RGLAFVTMGSEEEAL 448 VG ++ +I W+ L + G VV V + N +G FV EE+A Sbjct: 17 VGGLDEKVSESILWE--------LMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68 Query: 449 SALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAS 628 A+K LN+ L + IKV+ A +K V + +FVGNL V + L + F++ Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGAN------IFVGNLDPEVDEKLLYDTFSA 122 Query: 629 TPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV--MFKEDT 802 + V I S G+ F++F+S E ++ A+ NG+ L R+I V FK D+ Sbjct: 123 FGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDS 182
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 63.2 bits (152), Expect = 2e-09 Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 6/171 (3%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKNL 466 + M + + P D+ F G V DV + S +S+++RG+A+V A+ Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIGLT 214 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----VFVGNLTWRVRSRHLRELFAST 631 L I V ++ +K + A + ++K ++VG+L + + LR +F Sbjct: 215 GQRVLGVPII-VQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPF 273 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 ++S++++ + T R S GYGF++FS E A+ A+ NG EL GR + V Sbjct: 274 GRIESIQLMMDSETGR-SKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 63.2 bits (152), Expect = 2e-09 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV ++E A A+ +N LNDR + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L+E F SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKEWFGQYGAALSVKVM--TDDHGKSRGFGFVSFERHEDAQKAVDDMNGK 254 Query: 758 ELMGRSINV 784 +L G++I V Sbjct: 255 DLNGKAIFV 263 Score = 60.1 bits (144), Expect = 2e-08 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N D+ + ++ F + G + V++ K+RG FV+ E+A A+ + Sbjct: 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDD 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N LN + I V A+ K ++ E+ ++V NL + L Sbjct: 251 MNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFTPFGSITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 50.4 bits (119), Expect = 1e-05 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 P+ PS P+ ++VG+L V L E F+ + S+ V T RRS GY +V+F Sbjct: 3 PSAPSYPMAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIT-RRSLGYAYVNF 59 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A+ T N + G+ + +M+ + P KS Sbjct: 60 QQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKS 96
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 63.2 bits (152), Expect = 2e-09 Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-VFVG 577 ++G FV + E A A+K +N LN R + V K +K++ A A ++ V++ Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 N + L++LF SV+V+ T +S G+GFVSF E+A+ A+ NGK Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVM--TDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254 Query: 758 ELMGRSINV 784 EL G+ I V Sbjct: 255 ELNGKQIYV 263 Score = 62.0 bits (149), Expect = 5e-09 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 N D+ + ++ LF K G + V++ S K++G FV+ E+A A+ +N L Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 256 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHLRELFAS 628 N + I V A+ K ++ E+ ++V NL + LR+ F+ Sbjct: 257 NGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSP 316 Query: 629 TPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 + S +V+ RS G+GFV FSS EEA A++ NG+ Sbjct: 317 FGTITSAKVMMEGG---RSKGFGFVCFSSPEEATKAVTEMNGR 356
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 63.2 bits (152), Expect = 2e-09 Identities = 48/170 (28%), Positives = 80/170 (47%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSA 454 G L+ N+ + T + ++ +FEK T + V + H K++G AF+ S E+A A Sbjct: 486 GESKTLVLSNLSYSATEETLQEVFEK-ATFIKVPQNPHG--KSKGYAFIEFASFEDAKEA 542 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTP 634 L + N + RTI+++ P + P S P +FV L+ L+E F Sbjct: 543 LNSCNKMEIEGRTIRLELQGP-RGSPNARSQP--SKTLFVKGLSEDTTEETLKESF---E 596 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 G ++ T S G+GFV F+S+E+A+AA E+ G + + Sbjct: 597 GSVRARIVTDRET-GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTL 645 Score = 57.4 bits (137), Expect = 1e-07 Identities = 40/179 (22%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Frame = +2 Query: 260 DEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 D + V L+A N+ +++T D+++ +FE V++ L + +++G+A++ SE Sbjct: 389 DSKKVRAARTLLAKNLSFNITEDELKEVFED---AVEIRL-VSQDGRSKGIAYIEFKSEA 444 Query: 440 EALSALKNLNLSTLNDRTIKVDFAKPK-KKQPAVPSAPV---EKNVVFVGNLTWRVRSRH 607 +A L+ + ++ R++ + + K ++Q E + + NL++ Sbjct: 445 DAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEET 504 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 L+E+F ++ + +S GY F+ F+S E+A+ A+++ N E+ GR+I + Sbjct: 505 LQEVFEKATFIKVPQ-----NPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL 558 Score = 35.4 bits (80), Expect = 0.45 Identities = 21/81 (25%), Positives = 40/81 (49%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L + D T + ++ FE G+V ++ + ++G FV SEE+A +A Sbjct: 573 PSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 630 Query: 458 KNLNLSTLNDRTIKVDFAKPK 520 + + ++ + +D+AKPK Sbjct: 631 EAMEDGEIDGNKVTLDWAKPK 651
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 63.2 bits (152), Expect = 2e-09 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 3/180 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++++ LF G + +L + ++ G FV ++A A+ Sbjct: 38 KTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 98 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 151 IITSRILVDQVTGI-SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQK 209 Score = 42.4 bits (98), Expect = 0.004 Identities = 29/92 (31%), Positives = 45/92 (48%) Frame = +2 Query: 536 VPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSS 715 +P P +FV NL L ++F V +V+VI T + G+GFV+ ++ Sbjct: 268 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNT-NKCKGFGFVTMTN 326 Query: 716 KEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 +EA AI++ NG L R + V FK + K Sbjct: 327 YDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 63.2 bits (152), Expect = 2e-09 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 3/180 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++++ LF G + +L + ++ G FV ++A A+ Sbjct: 38 KTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 98 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 151 IITSRILVDQVTGI-SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQK 209 Score = 42.4 bits (98), Expect = 0.004 Identities = 29/92 (31%), Positives = 45/92 (48%) Frame = +2 Query: 536 VPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSS 715 +P P +FV NL L ++F V +V+VI T + G+GFV+ ++ Sbjct: 269 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNT-NKCKGFGFVTMTN 327 Query: 716 KEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 +EA AI++ NG L R + V FK + K Sbjct: 328 YDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 359
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 63.2 bits (152), Expect = 2e-09 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 3/180 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++++ LF G + +L + ++ G FV ++A A+ Sbjct: 38 KTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 98 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 151 IITSRILVDQVTGI-SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQK 209 Score = 42.4 bits (98), Expect = 0.004 Identities = 29/92 (31%), Positives = 45/92 (48%) Frame = +2 Query: 536 VPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSS 715 +P P +FV NL L ++F V +V+VI T + G+GFV+ ++ Sbjct: 268 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNT-NKCKGFGFVTMTN 326 Query: 716 KEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 +EA AI++ NG L R + V FK + K Sbjct: 327 YDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 63.2 bits (152), Expect = 2e-09 Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 3/183 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 +T LI +P ++T +++R LF G V +L + + G FV + ++A A+ Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P S ++ +++ L + + + ++F+ Sbjct: 79 STLNGLRLQSKTIKVSYARPS-------SEVIKDANLYISGLPRTMTQKDVEDMFSRFGR 131 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + V+ TT S G F+ F + EAE AI++F G + G S I V F + P + Sbjct: 132 IINSRVLVDQTT-GLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAAN-PNQ 189 Query: 812 NKS 820 NK+ Sbjct: 190 NKN 192 Score = 38.9 bits (89), Expect = 0.041 Identities = 25/82 (30%), Positives = 42/82 (51%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ NL L ++F V +V+VI T + G+GFV+ ++ EE+ AI++ Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNT-NKCKGFGFVTMTNYEESAMAIAS 304 Query: 746 FNGKELMGRSINVMFKEDTPKK 811 NG L + + V FK + K Sbjct: 305 LNGYRLGDKILQVSFKTNKSHK 326
>Q5RC41:RBM14_PONPY RNA-binding protein 14 - Pongo pygmaeus (Orangutan)| Length = 669 Score = 62.4 bits (150), Expect = 3e-09 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 1/167 (0%) Frame = +2 Query: 314 DVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLND-R 490 D TP+++ LF GTV+ + + AFV M AL A++ L+ L R Sbjct: 12 DTTPEELAALFAPYGTVMSCAVM-------KQFAFVHMRENAGALRAIEALHGHELRPGR 64 Query: 491 TIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT 670 + V+ ++P+ P+ +FVGN++ S+ LR LF V +V+ Sbjct: 65 ALVVEMSRPR---------PLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVV---- 111 Query: 671 TPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 Y FV + +A+AAI+ NGKE+ G+ INV KK Sbjct: 112 -----KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKK 153
>Q96PK6:RBM14_HUMAN RNA-binding protein 14 - Homo sapiens (Human)| Length = 669 Score = 62.4 bits (150), Expect = 3e-09 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 1/167 (0%) Frame = +2 Query: 314 DVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLND-R 490 D TP+++ LF GTV+ + + AFV M AL A++ L+ L R Sbjct: 12 DTTPEELAALFAPYGTVMSCAVM-------KQFAFVHMRENAGALRAIEALHGHELRPGR 64 Query: 491 TIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT 670 + V+ ++P+ P+ +FVGN++ S+ LR LF V +V+ Sbjct: 65 ALVVEMSRPR---------PLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVV---- 111 Query: 671 TPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 Y FV + +A+AAI+ NGKE+ G+ INV KK Sbjct: 112 -----KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKK 153
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 62.4 bits (150), Expect = 3e-09 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 3/180 (1%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSAL 457 KT LI +P ++T ++++ LF G + +L + ++ G FV ++A A+ Sbjct: 38 KTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 97 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 LN L +TIKV +A+P SA + ++V L + + L +LF+ Sbjct: 98 NTLNGLRLQTKTIKVSYARPS-------SASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS--INVMFKEDTPKK 811 + + ++ T S G GF+ F + EAE AI NG++ G + I V F + +K Sbjct: 151 IITSRILVDQVTGI-SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQK 209 Score = 42.4 bits (98), Expect = 0.004 Identities = 29/92 (31%), Positives = 45/92 (48%) Frame = +2 Query: 536 VPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSS 715 +P P +FV NL L ++F V +V+VI T + G+GFV+ ++ Sbjct: 268 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNT-NKCKGFGFVTMTN 326 Query: 716 KEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 +EA AI++ NG L R + V FK + K Sbjct: 327 YDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 62.0 bits (149), Expect = 5e-09 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSA-PVEKNVVFVG 577 +RG FV + E A A+ +N LNDR + V K ++++ A A +E ++V Sbjct: 137 SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVK 196 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 NL V + L++LF+ + SV+V+ + R +GFV+F EEA+ A+ NGK Sbjct: 197 NLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRC--FGFVNFEKHEEAQKAVVHMNGK 254 Query: 758 ELMGR 772 E+ GR Sbjct: 255 EVSGR 259 Score = 56.2 bits (134), Expect = 2e-07 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N+P DV ++ LF + G ++ V++ +S +R FV EEA A+ + Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 +N ++ R + A+ + ++ E+ ++V NL + L Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 R+ F+ + S +V+ T S G+GFV FSS EEA A++ NG+ Sbjct: 311 RKEFSPYGVITSAKVM---TEGGHSKGFGFVCFSSPEEATKAVTEMNGR 356 Score = 51.2 bits (121), Expect = 8e-06 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 1/170 (0%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSA 454 P L ++ DVT + F G ++ + + +++++ G A++ +A A Sbjct: 9 PLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERA 68 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTP 634 L +N L + I++ +++ + P + + V +F+ NL + ++ L + F++ Sbjct: 69 LDTMNFEMLKGQPIRIMWSQ---RDPGLRKSGVGN--IFIKNLEDSIDNKALYDTFSTFG 123 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + S +V S G+GFV F + E A+ AI+T NG L R + V Sbjct: 124 NILSCKV---ACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFV 170 Score = 47.4 bits (111), Expect = 1e-04 Identities = 28/85 (32%), Positives = 44/85 (51%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VG+L V L E F+ + S+ V T RRS GY +++F +AE A+ T Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVAT-RRSLGYAYINFQQPADAERALDT 71 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 N + L G+ I +M+ + P KS Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKS 96
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 62.0 bits (149), Expect = 5e-09 Identities = 45/170 (26%), Positives = 79/170 (46%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSA 454 G L+ N+ + T + ++ +FEK +++ + K++G AF+ S E+A A Sbjct: 483 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQQGKSKGYAFIEFASFEDAKEA 539 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTP 634 L + N + RTI+++ P + P S P +FV L+ L+E F Sbjct: 540 LNSCNKMEIEGRTIRLELQGP-RGSPNARSQP--SKTLFVKGLSEDTTEETLKESF---E 593 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 G ++ T S G+GFV F+S+E+A+AA E+ G + + Sbjct: 594 GSVRARIVTDRET-GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTL 642 Score = 57.8 bits (138), Expect = 9e-08 Identities = 40/179 (22%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Frame = +2 Query: 260 DEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 D + V L+A N+ +++T D+++ +FE +++ L + K++G+A++ SE Sbjct: 386 DSKKVRAARTLLAKNLSFNITEDELKEVFED---ALEIRL-VSQDGKSKGIAYIEFKSEA 441 Query: 440 EALSALKNLNLSTLNDRTIKVDFAKPK-KKQPAVPSAPV---EKNVVFVGNLTWRVRSRH 607 +A L+ + ++ R++ + + K ++Q E + + NL++ Sbjct: 442 DAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEET 501 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 L+E+F ++ + +S GY F+ F+S E+A+ A+++ N E+ GR+I + Sbjct: 502 LQEVFEKATFIKVPQ-----NQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL 555 Score = 35.4 bits (80), Expect = 0.45 Identities = 21/81 (25%), Positives = 40/81 (49%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L + D T + ++ FE G+V ++ + ++G FV SEE+A +A Sbjct: 570 PSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 627 Query: 458 KNLNLSTLNDRTIKVDFAKPK 520 + + ++ + +D+AKPK Sbjct: 628 EAMEDGEIDGNKVTLDWAKPK 648
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 61.6 bits (148), Expect = 6e-09 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 8/189 (4%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 PKT + N+ DVT I LF + G + ++ M ++ N FV A +AL Sbjct: 6 PKTLYVG-NLSRDVTEALILQLFSQIGPCKNCKMIMDTAG-NDPYCFVEFHEHRHAAAAL 63 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV--------VFVGNLTWRVRSRHLR 613 +N + + +KV++A Q S+ + VFVG+L+ ++ + ++ Sbjct: 64 AAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIK 123 Query: 614 ELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFK 793 FA + V+ T + S GYGFVSF +K +AE AI G+ L GR I + Sbjct: 124 AAFAPFGRISDARVVKDMATGK-SKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182 Query: 794 EDTPKKNKS 820 P KS Sbjct: 183 TRKPPAPKS 191
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 61.6 bits (148), Expect = 6e-09 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 3/157 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKP 517 LF + G VV+ + + +++G FV SEE+A A+K +N+ L + I+V+ A Sbjct: 32 LFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASA 91 Query: 518 KKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYG 697 K V + +F+GNL + + L + F++ + I S GY Sbjct: 92 HNKNLDVGAN------IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYA 145 Query: 698 FVSFSSKEEAEAAISTFNGKELMGRSINV--MFKEDT 802 F++F+S + ++AAI NG+ L R I V FK+D+ Sbjct: 146 FINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS 182
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 61.6 bits (148), Expect = 6e-09 Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 6/171 (3%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKNL 466 + M + + P D+ F G V DV + S +S++++G+A+V A+ Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLT 214 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----VFVGNLTWRVRSRHLRELFAST 631 L I V ++ +K + A + ++K ++VG+L + + LR +F Sbjct: 215 GQRVLGVPII-VQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPF 273 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 ++S++++ + T R S GYGF++FS E A+ A+ NG EL GR + V Sbjct: 274 GRIESIQLMMDSETGR-SKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 61.6 bits (148), Expect = 6e-09 Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 6/171 (3%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKNL 466 + M + + P D+ F G V DV + S +S++++G+A+V A+ Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLT 214 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----VFVGNLTWRVRSRHLRELFAST 631 L I V ++ +K + A + ++K ++VG+L + + LR +F Sbjct: 215 GQRVLGVPII-VQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPF 273 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 ++S++++ + T R S GYGF++FS E A+ A+ NG EL GR + V Sbjct: 274 GRIESIQLMMDSETGR-SKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>Q9D0E1:HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M - Mus musculus (Mouse)| Length = 729 Score = 61.6 bits (148), Expect = 6e-09 Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 41/211 (19%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLF-EKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 R NIP+DV ++ L EK G V VEL M + K+RG A V EE A + Sbjct: 71 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 130 Query: 464 LNLSTLNDRTIKV------DFAKPKKKQ---------------------------PAVPS 544 LN +L+ R +KV + A+ ++ P +P+ Sbjct: 131 LNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIPPSILNNPNIPN 190 Query: 545 APVEK-------NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFV 703 + + VFV NL ++V + L+E+F+ V +++ +S G G V Sbjct: 191 EIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADIL--EDKDGKSRGIGIV 248 Query: 704 SFSSKEEAEAAISTFNGKELMGRSINVMFKE 796 +F EA AIS FNG+ L R ++V E Sbjct: 249 TFEQSIEAVQAISMFNGQLLFDRPMHVKMDE 279
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 61.2 bits (147), Expect = 8e-09 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 8/189 (4%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 PKT + N+ DVT I LF + G + ++ M ++ N FV A +AL Sbjct: 6 PKTLYVG-NLSRDVTEALILQLFSQIGPCKNCKMIMDTAG-NDPYCFVEFHEHRHAAAAL 63 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV--------VFVGNLTWRVRSRHLR 613 +N + + +KV++A Q S+ + VFVG+L+ + + ++ Sbjct: 64 AAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIK 123 Query: 614 ELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFK 793 FA + V+ T + S GYGFVSF +K +AE AI G+ L GR I + Sbjct: 124 AAFAPFGRISDARVVKDMATGK-SKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182 Query: 794 EDTPKKNKS 820 P KS Sbjct: 183 TRKPPAPKS 191 Score = 52.8 bits (125), Expect = 3e-06 Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 19/182 (10%) Frame = +2 Query: 314 DVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDR 490 ++T +DI+ F G + D + ++ K++G FV+ ++ +A +A++ + L R Sbjct: 116 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGR 175 Query: 491 TIKVDFAKPKKKQPAVPSAPVEKNV------------------VFVGNLTWRVRSRHLRE 616 I+ ++A K P P + E N V+ G +T + + +R+ Sbjct: 176 QIRTNWATRK---PPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQ 232 Query: 617 LFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKE 796 F+ + + V GY FV FSS E A AI + NG + G + + + Sbjct: 233 TFSPFGQIMEIRVF-------PDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285 Query: 797 DT 802 +T Sbjct: 286 ET 287
>Q8C2Q3:RBM14_MOUSE RNA-binding protein 14 - Mus musculus (Mouse)| Length = 669 Score = 61.2 bits (147), Expect = 8e-09 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 1/167 (0%) Frame = +2 Query: 314 DVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLND-R 490 D TP+++ LF GTV+ + + AFV M A+ A++ L+ L R Sbjct: 12 DTTPEELAALFAPYGTVMSCAVM-------KQFAFVHMRENAGAVRAIEALHGHELRPGR 64 Query: 491 TIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT 670 + V+ ++P+ P+ +FVGN++ S+ LR LF V +V+ Sbjct: 65 ALVVEMSRPR---------PLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVV---- 111 Query: 671 TPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 Y FV + +A+AAI+ NGKE+ G+ INV KK Sbjct: 112 -----KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKK 153
>Q5EA36:RBM14_BOVIN RNA-binding protein 14 - Bos taurus (Bovine)| Length = 669 Score = 61.2 bits (147), Expect = 8e-09 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 1/167 (0%) Frame = +2 Query: 314 DVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLND-R 490 D TP+++ LF GTV+ + + AFV M A+ A++ L+ L R Sbjct: 12 DTTPEELAALFAPYGTVMSCAVM-------KQFAFVHMRENAGAVRAIEALHGHELRPGR 64 Query: 491 TIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT 670 + V+ ++P+ P+ +FVGN++ S+ LR LF V +V+ Sbjct: 65 ALVVEMSRPR---------PLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVV---- 111 Query: 671 TPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 Y FV + +A+AAI+ NGKE+ G+ INV KK Sbjct: 112 -----KDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKK 153
>P52272:HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M - Homo sapiens (Human)| Length = 730 Score = 60.8 bits (146), Expect = 1e-08 Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 41/211 (19%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLF-EKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 R NIP+DV ++ L EK G V VEL M + K+RG A V EE A + Sbjct: 72 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEV 131 Query: 464 LNLSTLNDRTIKV------DFAKPKKKQ---------------------------PAVPS 544 LN +L+ R +KV + A+ ++ P +P+ Sbjct: 132 LNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMITIPPSILNNPNIPN 191 Query: 545 APVEK-------NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFV 703 + + VFV NL ++V + L+E+F+ V +++ +S G G V Sbjct: 192 EIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADIL--EDKDGKSRGIGTV 249 Query: 704 SFSSKEEAEAAISTFNGKELMGRSINVMFKE 796 +F EA AIS FNG+ L R ++V E Sbjct: 250 TFEQSIEAVQAISMFNGQLLFDRPMHVKMDE 280
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 60.5 bits (145), Expect = 1e-08 Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 1/157 (0%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALK 460 T LI +P D+T ++ LF G + + + + + G AFV SE +A +A+K Sbjct: 85 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 144 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 +LN T+ ++ +KV +A+P + ++ ++V NL + L ++F + Sbjct: 145 SLNGVTVRNKRLKVSYARPGGES-------IKDTNLYVTNLPRTITDDELEKIFGKYGNI 197 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 ++ T + G FV F+ +EEA+ AIS N Sbjct: 198 VQKNILRDKLT-GKPRGVAFVRFNKREEAQEAISALN 233 Score = 31.2 bits (69), Expect = 8.5 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + V L + R L LF + + + ++ T S GY FV F+S+ +A+ AI + Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGY-SFGYAFVDFASEIDAQNAIKS 145 Query: 746 FNGKELMGRSINVMF 790 NG + + + V + Sbjct: 146 LNGVTVRNKRLKVSY 160
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 60.5 bits (145), Expect = 1e-08 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N+ T DD++ F + G + + K++G FV + ++A A+++ Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVES 274 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----------VFVGNLTWRVRSRHL 610 LN +D+ V A+ K ++ E+N+ ++V NL + L Sbjct: 275 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKL 334 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 +E+F+ V S +V+ S G GFV+F++ EEA A+S +GK + + + V Sbjct: 335 KEIFSPFGTVTSSKVMRDPNGT--SKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAI 392 Query: 791 ---KED 799 KED Sbjct: 393 AQRKED 398 Score = 58.5 bits (140), Expect = 5e-08 Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 1/168 (0%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALK 460 T L ++ ++VT + F + GTVV V + ++++ G +V + ++A A++ Sbjct: 36 TSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 LN L + I+V ++ + P+V + +F+ NL + + L + F+S + Sbjct: 96 ELNYIPLYGKPIRVMYSH---RDPSVRRSGAGN--IFIKNLDESIDHKALHDTFSSFGNI 150 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 S +V ++ +S GYGFV ++++E A+ AI NG L + + V Sbjct: 151 VSCKVAVDSSG--QSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196 Score = 49.3 bits (116), Expect = 3e-05 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%) Frame = +2 Query: 515 PKKKQPAVPSAPVEKN----------VVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFH 664 P AV SAP ++VG+L + V L + F V +V V Sbjct: 11 PNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRD 70 Query: 665 TTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 T RRS GYG+V+F++ ++A AI N L G+ I VM+ P +S Sbjct: 71 LVT-RRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRS 121
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 60.5 bits (145), Expect = 1e-08 Identities = 44/170 (25%), Positives = 79/170 (46%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSA 454 G L+ N+ + T + ++ +FEK +++ + + K++G AF+ S E+A A Sbjct: 485 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEA 541 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTP 634 L + N + R I+++ P + P S P +FV L+ L+E F Sbjct: 542 LNSCNKREIEGRAIRLELQGP-RGSPNARSQP--SKTLFVKGLSEDTTEETLKESF---D 595 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 G ++ T S G+GFV F+S+E+A+AA E+ G + + Sbjct: 596 GSVRARIVTDRET-GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTL 644 Score = 57.4 bits (137), Expect = 1e-07 Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L+A N+P+ VT D+++ +FE + V K++G+A++ +E +A + Sbjct: 397 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 452 Query: 470 LSTLNDRTIKVDFAKPKKKQPAVPSAPV-----EKNVVFVGNLTWRVRSRHLRELFASTP 634 + ++ R+I + + K + E + + NL++ L+E+F Sbjct: 453 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 512 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 ++ + +S GY F+ F+S E+A+ A+++ N +E+ GR+I + Sbjct: 513 FIKVPQ-----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 557 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/81 (24%), Positives = 40/81 (49%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L + D T + ++ F+ G+V ++ + ++G FV SEE+A +A Sbjct: 572 PSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 629 Query: 458 KNLNLSTLNDRTIKVDFAKPK 520 + + ++ + +D+AKPK Sbjct: 630 EAMEDGEIDGNKVTLDWAKPK 650
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 60.5 bits (145), Expect = 1e-08 Identities = 44/170 (25%), Positives = 79/170 (46%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSA 454 G L+ N+ + T + ++ +FEK +++ + + K++G AF+ S E+A A Sbjct: 484 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEA 540 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTP 634 L + N + R I+++ P + P S P +FV L+ L+E F Sbjct: 541 LNSCNKREIEGRAIRLELQGP-RGSPNARSQP--SKTLFVKGLSEDTTEETLKESF---D 594 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 G ++ T S G+GFV F+S+E+A+AA E+ G + + Sbjct: 595 GSVRARIVTDRET-GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTL 643 Score = 57.4 bits (137), Expect = 1e-07 Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L+A N+P+ VT D+++ +FE + V K++G+A++ +E +A + Sbjct: 396 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 451 Query: 470 LSTLNDRTIKVDFAKPKKKQPAVPSAPV-----EKNVVFVGNLTWRVRSRHLRELFASTP 634 + ++ R+I + + K + E + + NL++ L+E+F Sbjct: 452 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 511 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 ++ + +S GY F+ F+S E+A+ A+++ N +E+ GR+I + Sbjct: 512 FIKVPQ-----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 556 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/81 (24%), Positives = 40/81 (49%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L + D T + ++ F+ G+V ++ + ++G FV SEE+A +A Sbjct: 571 PSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 628 Query: 458 KNLNLSTLNDRTIKVDFAKPK 520 + + ++ + +D+AKPK Sbjct: 629 EAMEDGEIDGNKVTLDWAKPK 649
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 60.5 bits (145), Expect = 1e-08 Identities = 44/170 (25%), Positives = 79/170 (46%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSA 454 G L+ N+ + T + ++ +FEK +++ + + K++G AF+ S E+A A Sbjct: 483 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEA 539 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTP 634 L + N + R I+++ P + P S P +FV L+ L+E F Sbjct: 540 LNSCNKREIEGRAIRLELQGP-RGSPNARSQP--SKTLFVKGLSEDTTEETLKESF---D 593 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 G ++ T S G+GFV F+S+E+A+AA E+ G + + Sbjct: 594 GSVRARIVTDRET-GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTL 642 Score = 57.4 bits (137), Expect = 1e-07 Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L+A N+P+ VT D+++ +FE + V K++G+A++ +E +A + Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 450 Query: 470 LSTLNDRTIKVDFAKPKKKQPAVPSAPV-----EKNVVFVGNLTWRVRSRHLRELFASTP 634 + ++ R+I + + K + E + + NL++ L+E+F Sbjct: 451 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 510 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 ++ + +S GY F+ F+S E+A+ A+++ N +E+ GR+I + Sbjct: 511 FIKVPQ-----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 555 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/81 (24%), Positives = 40/81 (49%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L + D T + ++ F+ G+V ++ + ++G FV SEE+A +A Sbjct: 570 PSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 627 Query: 458 KNLNLSTLNDRTIKVDFAKPK 520 + + ++ + +D+AKPK Sbjct: 628 EAMEDGEIDGNKVTLDWAKPK 648
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 60.1 bits (144), Expect = 2e-08 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 1/157 (0%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALK 460 T LI +P D+T ++ LF G + + + + + G AFV SE +A +A+K Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 161 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 +N T+ ++ +KV +A+P + ++ ++V NL + L ++F + Sbjct: 162 TVNGITVRNKRLKVSYARPGGES-------IKDTNLYVTNLPRTITDDELEKIFGKYGNI 214 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 ++ T R G FV F+ +EEA+ AIS N Sbjct: 215 VQKNILRDKLT-GRPRGVAFVRFNKREEAQEAISALN 250
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 60.1 bits (144), Expect = 2e-08 Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 12/190 (6%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFV----------TMGS 433 +L + W T + +R F + G VVD V + ++ ++RG FV + S Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK-NVVFVGNLTWRVRSRHL 610 L +N++ R ++ + +PK+ P + K N +FVG + L Sbjct: 71 RPHTLDG-RNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 RE F GV + V+ + +R G+GF++F ++ + A++ + ++MG+ + V Sbjct: 130 REYFKKF-GVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVEVKR 187 Query: 791 KEDTPKKNKS 820 E KN++ Sbjct: 188 AEPRDSKNQA 197
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 59.7 bits (143), Expect = 2e-08 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 + N+ +D TP+D++ LF G VV+ ++ + S +RG+ V E A+ + Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADI-ITSKGHHRGMGTVEFTKNESVQDAISKFD 182 Query: 470 LSTLNDRTIKV--DFAKPKKKQPAVPSAPVEKN----VVFVGNLTWRVRSRHLRELFAST 631 + DR + V D P+ + A E+ VF+ NL + + + L+++F Sbjct: 183 GALFMDRKLMVRQDNPPPEAAKEFSKKATREEIDNGFEVFIINLPYSMNWQSLKDMFKEC 242 Query: 632 PGV--QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTP 805 V VE+ F+ S G+G V + +++E AI TFNG E+ GR + V Sbjct: 243 GHVLRADVELDFNGF----SRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEVREGRFNK 298 Query: 806 KKN 814 +KN Sbjct: 299 RKN 301 Score = 45.4 bits (106), Expect = 4e-04 Identities = 28/83 (33%), Positives = 42/83 (50%) Frame = +2 Query: 557 KNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAA 736 +N +FV NLT+ L+ELF + V ++I T+ G G V F+ E + A Sbjct: 121 ENSIFVRNLTFDCTPEDLKELFGTVGEVVEADII---TSKGHHRGMGTVEFTKNESVQDA 177 Query: 737 ISTFNGKELMGRSINVMFKEDTP 805 IS F+G M R + M ++D P Sbjct: 178 ISKFDGALFMDRKL--MVRQDNP 198
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 58.9 bits (141), Expect = 4e-08 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 1/186 (0%) Frame = +2 Query: 266 EPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEE 442 E G L N+ DVT I LF + G ++ + H+S N FV + Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRD 60 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A +AL +N + + +KV++A Q S VFVG+L+ + + ++ F Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFH---VFVGDLSPEITTEDIKSAF 117 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDT 802 A + V+ T + S GYGFVSF +K +AE AI G+ L GR I + Sbjct: 118 APFGKISDARVVKDMATGK-SKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK 176 Query: 803 PKKNKS 820 P KS Sbjct: 177 PPAPKS 182
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 58.5 bits (140), Expect = 5e-08 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 K RLI N+ + + DD++ +F GTV++V + K RG AFV + EA ALK Sbjct: 113 KARLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALK 172 Query: 461 NLNLSTLNDRTIKVDF--AKPKKKQPAVPSAP 550 N+ + RT+ VD+ AK K K SAP Sbjct: 173 GANMKEIKGRTVAVDWAVAKDKYKDAQHASAP 204 Score = 46.6 bits (109), Expect = 2e-04 Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 18/183 (9%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDV-ELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 L +P D + LF + G V ++ SK RG +VT E+ ALK + Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 467 N---------------LSTLNDRTIKVDFAKPKKKQPAVPSAPV--EKNVVFVGNLTWRV 595 L + T K + A+ KK+P A V +K + + NL+++ Sbjct: 66 TTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFKC 125 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+ +F V +EV + G+ FV F + EA A+ N KE+ GR+ Sbjct: 126 SEDDLKAVFTHYGTV--LEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 183 Query: 776 INV 784 + V Sbjct: 184 VAV 186 Score = 38.1 bits (87), Expect = 0.070 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%) Frame = +2 Query: 503 DFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR 682 D +KK+ +PS E VF+ NL++ L E+ ++ V V+ H T Sbjct: 306 DVPVSEKKKRKLPSDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDT-EH 364 Query: 683 SAGYGFVSFSSKEEAEAAISTFN------GKELMGRSINV 784 S G F F ++E A+ ++ + G +L GR + V Sbjct: 365 SKGCAFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRQLKV 404
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 58.5 bits (140), Expect = 5e-08 Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 12/190 (6%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFV----------TMGS 433 +L + W T + +R F + G VVD V + ++ ++RG FV + S Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK-NVVFVGNLTWRVRSRHL 610 L +N++ R ++ + +PK+ P + K N +FVG + L Sbjct: 71 RPHTLDG-RNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 129 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 RE F GV + V+ + +R G+GF++F ++ + A++ + ++MG+ + V Sbjct: 130 REYFKKF-GVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVEV-- 185 Query: 791 KEDTPKKNKS 820 K P+ +KS Sbjct: 186 KRAEPRDSKS 195
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 58.2 bits (139), Expect = 7e-08 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 6/171 (3%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKNL 466 + M + + P D+ F G V DV + S +S++++G+A+V E +++ L Sbjct: 168 VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF-CEIQSVPLAIGL 226 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV-----VFVGNLTWRVRSRHLRELFAST 631 L I V ++ +K + A + ++K ++VG+L + + LR +F Sbjct: 227 TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPF 286 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + ++ V+ + RS GYGF++FS E A A+ NG EL GR + V Sbjct: 287 GKIDNI-VLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>Q5BGA9:MRD1_EMENI Multiple RNA-binding domain-containing protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 819 Score = 58.2 bits (139), Expect = 7e-08 Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 13/197 (6%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKN------RG 409 AD DEE + T L N+ + T + F V + KN G Sbjct: 581 ADEGDEEVMATAT-LFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMG 639 Query: 410 LAFVTMGSEEEALSALKNLNLSTLNDRTIKV-------DFAKPKKKQPAVPSAPVEKNVV 568 F ++ +A +AL +N TL+ T+ V D A+ ++K+ + + Sbjct: 640 FGFADFKTKAQAQAALAVMNGYTLDRHTLVVRASHKGMDAAEERRKEDTAKKIAARRTKI 699 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 + NL ++ + +R LF + ++SV V R + G+GF F S EAE A+ Sbjct: 700 IIKNLPFQATKKDVRSLFGAYGQLRSVRV--PKKFDRSARGFGFADFVSAREAENAMDAL 757 Query: 749 NGKELMGRSINVMFKED 799 L+GR + + F + Sbjct: 758 KNTHLLGRRLVLEFANE 774 Score = 42.7 bits (99), Expect = 0.003 Identities = 26/95 (27%), Positives = 43/95 (45%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 +T++I N+P+ T D+R LF G + V + + RG F S EA +A+ Sbjct: 696 RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMD 755 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV 565 L + L R + ++FA + +EK V Sbjct: 756 ALKNTHLLGRRLVLEFANEEAIDAEEEIQRIEKKV 790 Score = 37.0 bits (84), Expect = 0.16 Identities = 27/84 (32%), Positives = 38/84 (45%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 TR+ +P +T D ++ FE + V D H K R + FV S E A A+ Sbjct: 4 TRVFVSGLPPTLTNDQLKKHFETRFHVTDA----HVLPKRR-IGFVGFKSSEAAQQAVSY 58 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPA 535 N + + I VD AKP +PA Sbjct: 59 FNKTYMRMSKISVDIAKPIDAEPA 82
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus| laevis (African clawed frog) Length = 358 Score = 57.8 bits (138), Expect = 9e-08 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ T + +R +E+ G + D V + +SK++RG FVT E +A+ + Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAM-S 68 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 T++ R ++ A +++ A P A V +FVG + HLRE F ++ Sbjct: 69 ARPHTIDGRVVEPKRAVAREES-AKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIE 127 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 S E+I + ++ G+GFV+F+ + + + T NG Sbjct: 128 STEIITDKQSGKK-RGFGFVTFNDHDPVDKIVLQKYHTING 167
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 57.8 bits (138), Expect = 9e-08 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + NI D+ + ++ LF + G V++ +S K++G FV + E A A+ + Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 464 LNLSTLNDRTIKVDFAKPK----------------KKQPAVPSAPVEKNVVFVGNLTWRV 595 L+ +++ + + V A+ K K++ P P+ ++ NL + Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI-----YIKNLDETI 313 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+E F+S + +V+ + G+G V FSS EEA A+ NG+ + + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMMEVG---QGKGFGVVCFSSFEEATKAVDEMNGRVVGSKP 370 Query: 776 INV 784 ++V Sbjct: 371 LHV 373 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKP 517 LF G ++ ++ + ++G A+V S A A+ ++N LN+R + V F P Sbjct: 125 LFSAFGNILSCKV-VCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 183 Query: 518 KKKQPAVPSAP-VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 +++ V + VFV N+ + L+ELF +SV+VI + +S G+ Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG--KSKGF 241 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINV 784 GFV + + E A+ A+ +GK + G+ + V Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/97 (25%), Positives = 43/97 (44%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 PA K ++VG+L V L + F ++ + T R GYG+V+F Sbjct: 8 PAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVT-RSPLGYGYVNF 66 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A++T N + G+ +M+ + + KS Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKS 103
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 57.8 bits (138), Expect = 9e-08 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 1/161 (0%) Frame = +2 Query: 242 TEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAF 418 TEA A E + ++ + WD T D++ F K G VVD L + + ++RG F Sbjct: 87 TEAAAAQRE----EWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVR 598 V + E E++ + + LN + I PK+ + PV+K +FVG L+ Sbjct: 143 V-LFKESESVDKVMDQKEHKLNGKVI-----DPKRAKAMKTKEPVKK--IFVGGLSPDTP 194 Query: 599 SRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKE 721 +RE F V+S+E+ T +R G+ F++F +E Sbjct: 195 EEKIREYFGGFGEVESIELPMDNKTNKR-RGFCFITFKEEE 234
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 57.8 bits (138), Expect = 9e-08 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 5/182 (2%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKN 463 +L ++P T ++IR FE+ G V++V L + + +G FV + ++A A++ Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180 Query: 464 L-NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 L N TL T V ++ + + + +FVG+L + + + E+F V Sbjct: 181 LHNQITLPGGTGPVQVRYADGERERIGTLEFK---LFVGSLNKQATEKEVEEIFLQFGHV 237 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM---GRSINVMFKEDTPKK 811 + V ++ R+S G GFV +SSKE A AAI NG M + + V F E PK+ Sbjct: 238 EDVYLM--RDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE--PKR 293 Query: 812 NK 817 K Sbjct: 294 PK 295
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 57.8 bits (138), Expect = 9e-08 Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 3/178 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L IP ++ D+R LFE+ G + ++ L + ++G AF+T + E AL A Sbjct: 48 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKA--- 104 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 + L+++ +P + +PA + E +FVG L + +R LF S ++ Sbjct: 105 --QTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIE 162 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINVMFK-EDTPKK 811 ++ S G FV +S+ EA+AAIS +G + M G S +++ K DT K+ Sbjct: 163 ECTIL--RGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKE 218 Score = 33.5 bits (75), Expect = 1.7 Identities = 22/76 (28%), Positives = 37/76 (48%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ +L L ++F V S +V T +S +GFVSF + A+AAI + Sbjct: 437 LFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRAT-NQSKCFGFVSFDNPGSAQAAIQS 495 Query: 746 FNGKELMGRSINVMFK 793 NG ++ + + V K Sbjct: 496 MNGFQIGMKRLKVQLK 511 Score = 32.3 bits (72), Expect = 3.8 Identities = 19/70 (27%), Positives = 32/70 (45%) Frame = +2 Query: 260 DEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 D E G +L + DD+R LFE G++ + + ++G AFV + Sbjct: 127 DSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSTHA 186 Query: 440 EALSALKNLN 469 EA +A+ L+ Sbjct: 187 EAQAAISALH 196
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 57.4 bits (137), Expect = 1e-07 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + NI D+ + ++ LF + G V++ +S K++G FV + E A A+ + Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 464 LNLSTLNDRTIKVDFAKPK----------------KKQPAVPSAPVEKNVVFVGNLTWRV 595 L+ +++ + + V A+ K K++ P P+ ++ NL + Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI-----YIKNLDETI 313 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+E F+S + +V+ + G+G V FSS EEA A+ NG+ + + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMMEVG---QGKGFGVVCFSSFEEATKAVDEMNGRIVGSKP 370 Query: 776 INV 784 ++V Sbjct: 371 LHV 373 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKP 517 LF G ++ ++ + ++G A+V S A A+ ++N LN+R + V F P Sbjct: 125 LFSAFGNILSCKV-VCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 183 Query: 518 KKKQPAVPSAP-VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 +++ V + VFV N+ + L+ELF +SV+VI + +S G+ Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG--KSKGF 241 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINV 784 GFV + + E A+ A+ +GK + G+ + V Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/97 (25%), Positives = 43/97 (44%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 PA K ++VG+L V L + F ++ + T R GYG+V+F Sbjct: 8 PAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVT-RSPLGYGYVNF 66 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A++T N + G+ +M+ + + KS Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKS 103
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 57.4 bits (137), Expect = 1e-07 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + NI D+ + ++ LF + G V++ +S K++G FV + E A A+ + Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 464 LNLSTLNDRTIKVDFAKPK----------------KKQPAVPSAPVEKNVVFVGNLTWRV 595 L+ +++ + + V A+ K K++ P P+ ++ NL + Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI-----YIKNLDETI 313 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+E F+S + +V+ + G+G V FSS EEA A+ NG+ + + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMMEVG---QGKGFGVVCFSSFEEATKAVDEMNGRIVGSKP 370 Query: 776 INV 784 ++V Sbjct: 371 LHV 373 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKP 517 LF G ++ ++ + ++G A+V S A A+ ++N LN+R + V F P Sbjct: 125 LFSAFGNILSCKV-VCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 183 Query: 518 KKKQPAVPSAP-VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 +++ V + VFV N+ + L+ELF +SV+VI + +S G+ Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG--KSKGF 241 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINV 784 GFV + + E A+ A+ +GK + G+ + V Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/97 (25%), Positives = 43/97 (44%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 PA K ++VG+L V L + F ++ + T R GYG+V+F Sbjct: 8 PAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVT-RSPLGYGYVNF 66 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A++T N + G+ +M+ + + KS Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKS 103
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 57.4 bits (137), Expect = 1e-07 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + NI D+ + ++ LF + G V++ +S K++G FV + E A A+ + Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 464 LNLSTLNDRTIKVDFAKPK----------------KKQPAVPSAPVEKNVVFVGNLTWRV 595 L+ +++ + + V A+ K K++ P P+ ++ NL + Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI-----YIKNLDETI 313 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+E F+S + +V+ + G+G V FSS EEA A+ NG+ + + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMMEVG---QGKGFGVVCFSSFEEATKAVDEMNGRIVGSKP 370 Query: 776 INV 784 ++V Sbjct: 371 LHV 373 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKP 517 LF G ++ ++ + ++G A+V S A A+ ++N LN+R + V F P Sbjct: 125 LFSAFGNILSCKV-VCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 183 Query: 518 KKKQPAVPSAP-VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 +++ V + VFV N+ + L+ELF +SV+VI + +S G+ Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG--KSKGF 241 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINV 784 GFV + + E A+ A+ +GK + G+ + V Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/97 (25%), Positives = 43/97 (44%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 PA K ++VG+L V L + F ++ + T R GYG+V+F Sbjct: 8 PAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVT-RSPLGYGYVNF 66 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A++T N + G+ +M+ + + KS Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKS 103
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 57.4 bits (137), Expect = 1e-07 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + NI D+ + ++ LF + G V++ +S K++G FV + E A A+ + Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 464 LNLSTLNDRTIKVDFAKPK----------------KKQPAVPSAPVEKNVVFVGNLTWRV 595 L+ +++ + + V A+ K K++ P P+ ++ NL + Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI-----YIKNLDETI 313 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+E F+S + +V+ + G+G V FSS EEA A+ NG+ + + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMMEVG---QGKGFGVVCFSSFEEATKAVDEMNGRIVGSKP 370 Query: 776 INV 784 ++V Sbjct: 371 LHV 373 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKP 517 LF G ++ ++ + ++G A+V S A A+ ++N LN+R + V F P Sbjct: 125 LFSAFGNILSCKV-VCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 183 Query: 518 KKKQPAVPSAP-VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 +++ V + VFV N+ + L+ELF +SV+VI + +S G+ Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG--KSKGF 241 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINV 784 GFV + + E A+ A+ +GK + G+ + V Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/97 (25%), Positives = 43/97 (44%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 PA K ++VG+L V L + F ++ + T R GYG+V+F Sbjct: 8 PAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVT-RSPLGYGYVNF 66 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A++T N + G+ +M+ + + KS Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKS 103
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 57.4 bits (137), Expect = 1e-07 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + NI D+ + ++ LF + G V++ +S K++G FV + E A A+ + Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 464 LNLSTLNDRTIKVDFAKPK----------------KKQPAVPSAPVEKNVVFVGNLTWRV 595 L+ +++ + + V A+ K K++ P P+ ++ NL + Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI-----YIKNLDETI 313 Query: 596 RSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L+E F+S + +V+ + G+G V FSS EEA A+ NG+ + + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMMEVG---QGKGFGVVCFSSFEEATKAVDEMNGRIVGSKP 370 Query: 776 INV 784 ++V Sbjct: 371 LHV 373 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +2 Query: 341 LFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD-FAKP 517 LF G ++ ++ + ++G A+V S A A+ ++N LN+R + V F P Sbjct: 125 LFSAFGNILSCKV-VCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 183 Query: 518 KKKQPAVPSAP-VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGY 694 +++ V + VFV N+ + L+ELF +SV+VI + +S G+ Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASG--KSKGF 241 Query: 695 GFVSFSSKEEAEAAISTFNGKELMGRSINV 784 GFV + + E A+ A+ +GK + G+ + V Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/97 (25%), Positives = 43/97 (44%) Frame = +2 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 PA K ++VG+L V L + F ++ + T R GYG+V+F Sbjct: 8 PAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVT-RSPLGYGYVNF 66 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 +AE A++T N + G+ +M+ + + KS Sbjct: 67 RFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKS 103
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 57.4 bits (137), Expect = 1e-07 Identities = 34/80 (42%), Positives = 44/80 (55%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+G L+W LR+ FA V +VI T R S G+GFV+F+ + A AAIS Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGR-SRGFGFVNFNDEGAATAAISE 95 Query: 746 FNGKELMGRSINVMFKEDTP 805 +GKEL GR I V D P Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 57.0 bits (136), Expect = 1e-07 Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 1/163 (0%) Frame = +2 Query: 266 EPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEE 442 +P T LI +P D+T ++ LF G + + + + + G AFV SE + Sbjct: 119 DPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 178 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 + A+K LN T+ ++ +KV +A+P + ++ ++V NL + L +F Sbjct: 179 SQRAIKVLNGITVRNKRLKVSYARPGGES-------IKDTNLYVTNLPRTITDDQLDTIF 231 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 + ++ T R G FV ++ +EEA+ AIS N Sbjct: 232 GKYGSIVQKNILRDKLT-GRPRGVAFVRYNKREEAQEAISALN 273
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus| laevis (African clawed frog) Length = 346 Score = 57.0 bits (136), Expect = 1e-07 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ T + +R +E+ GT+ D V + +SK++RG FVT E +A+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 T++ R ++ A +++ A P A V +FVG + HLRE F + Sbjct: 70 -RPHTIDGRVVEPKRAVAREES-AKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKID 127 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 S+E+I + ++ G+ FV+F + + + T NG Sbjct: 128 SIEIITDKQSGKK-RGFAFVTFDDHDPVDKIVLQKYHTING 167
>Q7SG09:MRD1_NEUCR Multiple RNA-binding domain-containing protein 1 - Neurospora| crassa Length = 827 Score = 57.0 bits (136), Expect = 1e-07 Identities = 28/92 (30%), Positives = 52/92 (56%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T+L+ N+P++VT ++R LF G +V + + ++ +RG AF + +EAL+A + Sbjct: 704 TKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 763 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK 559 L + + R + +DFA+ + P A +EK Sbjct: 764 LKDTHILGRRLVIDFAQAEDIDPEDQIAAMEK 795 Score = 48.9 bits (115), Expect = 4e-05 Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 28/195 (14%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T ++ NI + T +++R LFE+ GTV+ V + + +A V + +A Sbjct: 489 TTILVKNIK-NTTIEELRTLFEEHGTVLRVLMPPSGT-----IAIVQFAQPVQCRTAFAR 542 Query: 464 LNLSTLNDRTIKVD----------FAKPKKKQPAVPSAP--------------VEKNVVF 571 S D + ++ A P +PA P +E + +F Sbjct: 543 KAYSRFKDSVLFLEKGPKGLFTDNVAVPTDARPAGVQKPSVADLLERDDAEEQLETSSLF 602 Query: 572 VGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPR----RSAGYGFVSFSSKEEAEAAI 739 V NL + S+ L + F G +V T + S G+GFV+F +K++A+AA+ Sbjct: 603 VRNLNFSTTSQGLTDAFKHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAAL 662 Query: 740 STFNGKELMGRSINV 784 +G+ L I+V Sbjct: 663 KVMDGQVLDAHKISV 677
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 57.0 bits (136), Expect = 1e-07 Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRG--- 409 E++ D E E GP + N+ + T + LF+ V + KN G Sbjct: 602 ESKEDDEIESVQGPTVAVFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTL 661 Query: 410 ---LAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKN----VV 568 FV ++E+A A+ L+ L+ +++ + K+ ++ ++K+ + Sbjct: 662 SMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLSH--KQGTGTSASSIKKSGKSSKI 719 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 + NL + + L ELF + ++SV V + + G+ FV F+ +EAE A+S Sbjct: 720 IIKNLPFEATRKDLLELFGAFGQLKSVRV--PKKFDQSARGFAFVEFNLMKEAETAMSQL 777 Query: 749 NGKELMGRSINVMFKEDTPK 808 G L+GR + + + E P+ Sbjct: 778 EGVHLLGRRLVMQYAEQDPE 797 Score = 51.6 bits (122), Expect = 6e-06 Identities = 33/92 (35%), Positives = 49/92 (53%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +RLI +P T + +R F KQG V DV+L + ++R AF+ S + A A+K Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK 559 N S ++ I+V+FAK P VP + EK Sbjct: 62 FNKSFIDTARIEVEFAK-TFSDPTVPLSFKEK 92 Score = 39.7 bits (91), Expect = 0.024 Identities = 27/108 (25%), Positives = 47/108 (43%) Frame = +2 Query: 242 TEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFV 421 T A + G +++I N+P++ T D+ LF G + V + + RG AFV Sbjct: 703 TGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFV 762 Query: 422 TMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV 565 +EA +A+ L L R + + +A+ + V + K V Sbjct: 763 EFNLMKEAETAMSQLEGVHLLGRRLVMQYAEQDPENAEVEIERMTKKV 810
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 56.6 bits (135), Expect = 2e-07 Identities = 31/94 (32%), Positives = 49/94 (52%) Frame = +2 Query: 245 EADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVT 424 E A+ + K RLI N+ + + DD++ +F + G V++V + K RG FV Sbjct: 101 EPKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQ 160 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKK 526 + EA ALK +N+ + RT+ VD+A K K Sbjct: 161 FKNLLEAGKALKGMNMKEIKGRTVAVDWAVAKDK 194 Score = 51.2 bits (121), Expect = 8e-06 Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 20/185 (10%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDV-ELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 L +P + + LF + G V ++ SK RG +VT E+ ALK + Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 467 NLSTLNDRTIKVDFAKPK-----------------KKQPAVPSAPV--EKNVVFVGNLTW 589 +T I V AK K KK+P A V +K + + NL++ Sbjct: 66 --TTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSF 123 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMG 769 + L+ +FA V +EV + G+GFV F + EA A+ N KE+ G Sbjct: 124 KCSEDDLKTVFAQFGAV--LEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKG 181 Query: 770 RSINV 784 R++ V Sbjct: 182 RTVAV 186 Score = 37.0 bits (84), Expect = 0.16 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 6/106 (5%) Frame = +2 Query: 485 DRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFH 664 D+ ++V KK+ +PS E VF+ NL++ L EL ++ V ++ H Sbjct: 314 DKAVQVS----NKKKRKLPSDVNEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLH 369 Query: 665 TTTPRRSAGYGFVSFSSKEEAEAAI------STFNGKELMGRSINV 784 T S G F F ++E A+ + + G +L GR + V Sbjct: 370 PDT-EHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQLKV 414
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 3/150 (2%) Frame = +2 Query: 344 FEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKK 523 F G ++ +++ ++G FV +EE A +++ +N LN + + V P+K Sbjct: 110 FSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRK 169 Query: 524 KQPAV--PSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYG 697 ++ A + NV +V N T L+E F + S +V+ + +S G+G Sbjct: 170 EREKELGEKAKLFTNV-YVKNFTEDFDDEKLKEFFEPYGKITSYKVM--SKEDGKSKGFG 226 Query: 698 FVSFSSKEEAEAAISTFNGKEL-MGRSINV 784 FV+F + E AEAA+ NGK++ G+S+ V Sbjct: 227 FVAFETTEAAEAAVQALNGKDMGEGKSLYV 256 Score = 52.4 bits (124), Expect = 4e-06 Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 16/192 (8%) Frame = +2 Query: 257 EDEEPVGPKTRLIA----MNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVT 424 E E+ +G K +L N D + ++ FE G + ++ K++G FV Sbjct: 170 EREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVA 229 Query: 425 MGSEEEALSALKNLNLSTLND-RTIKVDFAKPKKKQPAVPSAPVEKNV-----------V 568 + E A +A++ LN + + +++ V A+ K ++ E+ + Sbjct: 230 FETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNL 289 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +V NL + LR F+ + S +V+ T RS G+GFV F++ EA A++ Sbjct: 290 YVKNLDDTIDDDRLRIAFSPYGNITSAKVM--TDEEGRSKGFGFVCFNAASEATCAVTEL 347 Query: 749 NGKELMGRSINV 784 NG+ + + + V Sbjct: 348 NGRVVGSKPLYV 359 Score = 45.1 bits (105), Expect = 6e-04 Identities = 27/85 (31%), Positives = 43/85 (50%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VG+L V L + F+S V S+ V T RRS GY +V+F +AE A+ T Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVIT-RRSLGYAYVNFQQPADAERALDT 62 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 N + + I +M+ + P +S Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRS 87
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 56.2 bits (134), Expect = 2e-07 Identities = 39/191 (20%), Positives = 91/191 (47%), Gaps = 4/191 (2%) Frame = +2 Query: 260 DEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 D + V L+A N+ +++T D+++ +FE +++ L + K++G+A++ SE Sbjct: 387 DSKKVRAARTLLAKNLSFNITEDELKEVFED---AMEIRL-VSQDGKSKGIAYIEFKSEA 442 Query: 440 EALSALKNLNLSTLNDRTIKVDFAKPK----KKQPAVPSAPVEKNVVFVGNLTWRVRSRH 607 +A L+ + ++ R++ + + K ++ + E + + NL++ Sbjct: 443 DAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKET 502 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVM 787 L E+F ++ + + GY F+ F+S E+A+ A+++ N E+ GR+I + Sbjct: 503 LEEVFEKATFIKVPQ-----NPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE 557 Query: 788 FKEDTPKKNKS 820 + + S Sbjct: 558 LQGSNSRSQPS 568 Score = 35.4 bits (80), Expect = 0.45 Identities = 21/81 (25%), Positives = 40/81 (49%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L + D T + ++ FE G+V ++ + ++G FV SEE+A +A Sbjct: 567 PSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624 Query: 458 KNLNLSTLNDRTIKVDFAKPK 520 + + ++ + +D+AKPK Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus| (Rat) Length = 353 Score = 56.2 bits (134), Expect = 2e-07 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 1/140 (0%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 + WD T D++ F K G VVD L + + ++RG FV + E E++ + + L Sbjct: 102 LSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV-LFKESESVDKVMDQKEHKL 160 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 N + I PK+ + PV+K +FVG L+ +RE F V+S+E+ Sbjct: 161 NGKVI-----DPKRAKAMKTKEPVKK--IFVGGLSPDTPEEKIREYFGGFGEVESIELPM 213 Query: 662 HTTTPRRSAGYGFVSFSSKE 721 T +R G+ F++F +E Sbjct: 214 DNKTNKR-RGFCFITFKEEE 232 Score = 34.3 bits (77), Expect = 1.0 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 4/94 (4%) Frame = +2 Query: 542 SAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKE 721 +A E+ +F+G L+W + L++ F+ V + T RS G+GFV F E Sbjct: 89 TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPIT-GRSRGFGFVLFKESE 147 Query: 722 EAEAAIS----TFNGKELMGRSINVMFKEDTPKK 811 + + NGK + + M ++ KK Sbjct: 148 SVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKK 181
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 56.2 bits (134), Expect = 2e-07 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 1/140 (0%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 + WD T D++ F K G VVD L + + ++RG FV + E E++ + + L Sbjct: 104 LSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV-LFKESESVDKVMDQKEHKL 162 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 N + I PK+ + PV+K +FVG L+ +RE F V+S+E+ Sbjct: 163 NGKVI-----DPKRAKAMKTKEPVKK--IFVGGLSPDTPEEKIREYFGGFGEVESIELPM 215 Query: 662 HTTTPRRSAGYGFVSFSSKE 721 T +R G+ F++F +E Sbjct: 216 DNKTNKR-RGFCFITFKEEE 234 Score = 34.3 bits (77), Expect = 1.0 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 4/105 (3%) Frame = +2 Query: 509 AKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSA 688 + P+ + A +A E+ +F+G L+W + L++ F+ V + T RS Sbjct: 82 SSPRHSEAA--TAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPIT-GRSR 138 Query: 689 GYGFVSFSSKEEAEAAIS----TFNGKELMGRSINVMFKEDTPKK 811 G+GFV F E + + NGK + + M ++ KK Sbjct: 139 GFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKK 183
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 55.8 bits (133), Expect = 3e-07 Identities = 31/80 (38%), Positives = 48/80 (60%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +++G L+ L++ F+S GV V+ + T R S GYGFV+F S++ A +AIS Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGR-SRGYGFVNFISEDSANSAISA 91 Query: 746 FNGKELMGRSINVMFKEDTP 805 NG+EL G +I+V +D P Sbjct: 92 MNGQELNGFNISVNVAKDWP 111
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 55.8 bits (133), Expect = 3e-07 Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 15/193 (7%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFV----------TMGS 433 +L + W T + +R F + G VVD V + ++ ++RG FV + S Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPK----KKQPAVPSAPVEKNVVFVGNLTWRVRS 601 L +N++ R ++ + ++P+ +K+P ++ N +FVG + Sbjct: 71 RPHTLDG-RNIDPKPCTPRGMQPERSRPREGWQQKEPRTENS--RSNKIFVGGIPHNCGE 127 Query: 602 RHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSIN 781 L+E F + GV + V+ + +R G+GF++F ++ + A++ + ++MG+ + Sbjct: 128 TELKEYF-NRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVE 185 Query: 782 VMFKEDTPKKNKS 820 V K P+ +KS Sbjct: 186 V--KRAEPRDSKS 196
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 55.5 bits (132), Expect = 4e-07 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 1/157 (0%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALK 460 T LI +P D+T ++ LF G + + + + + G AFV +E ++ A+K Sbjct: 110 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 169 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 +LN T+ ++ +KV +A+P + ++ ++V NL + L +F G+ Sbjct: 170 SLNGITVRNKRLKVSYARPGGES-------IKDTNLYVTNLPRTITDDQLDTIFGKY-GM 221 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 + I + G FV F+ +EEA+ AIS N Sbjct: 222 IVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 258
>Q8C854:MYEF2_MOUSE Myelin expression factor 2 - Mus musculus (Mouse)| Length = 591 Score = 55.5 bits (132), Expect = 4e-07 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 42/215 (19%) Frame = +2 Query: 266 EPVGP-KTRLIAMNIPWDVTPDDIRVLF-EKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 E GP + R+ NIP+D+ I+ L EK G V VEL + K+RG V EE Sbjct: 84 EKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEE 143 Query: 440 EALSALKNLNLSTLNDRTIKV----DFAKPKK---------------------------- 523 AL+ +N L+ R + + D ++ Sbjct: 144 FVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSI 203 Query: 524 -KQPAVPSAPVEK-------NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPR 679 P +P + + +FV NL ++V + L+E+F+ V+ ++ Sbjct: 204 LNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADI--KEDKDG 261 Query: 680 RSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +S G G V+F EA AIS FNG+ L R ++V Sbjct: 262 KSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHV 296 Score = 32.7 bits (73), Expect = 2.9 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 ++ N+P+D+T ++ F + G V+ E+ M + K++G V S E A A + + Sbjct: 515 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENG-KSKGCGTVRFESAESAEKACRIM 573 Query: 467 NLSTLNDRTIKV 502 N ++ R I V Sbjct: 574 NGIKISGREIDV 585
>Q9P2K5:MYEF2_HUMAN Myelin expression factor 2 - Homo sapiens (Human)| Length = 600 Score = 55.5 bits (132), Expect = 4e-07 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 42/215 (19%) Frame = +2 Query: 266 EPVGP-KTRLIAMNIPWDVTPDDIRVLF-EKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 E GP + R+ NIP+D+ I+ L EK G V VEL + K+RG V EE Sbjct: 93 EKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEE 152 Query: 440 EALSALKNLNLSTLNDRTIKV----DFAKPKK---------------------------- 523 AL+ +N L+ R + + D ++ Sbjct: 153 FVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSI 212 Query: 524 -KQPAVPSAPVEK-------NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPR 679 P +P + + +FV NL ++V + L+E+F+ V+ ++ Sbjct: 213 LNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADI--KEDKDG 270 Query: 680 RSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +S G G V+F EA AIS FNG+ L R ++V Sbjct: 271 KSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHV 305 Score = 34.7 bits (78), Expect = 0.77 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +2 Query: 266 EPVGPK-TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E +G K ++ N+P+D+T ++ F + G V+ E+ M + K++G V S E Sbjct: 516 ERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENG-KSKGCGTVRFDSPES 574 Query: 443 ALSALKNLNLSTLNDRTIKV 502 A A + +N ++ R I V Sbjct: 575 AEKACRIMNGIKISGREIDV 594
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 55.1 bits (131), Expect = 6e-07 Identities = 49/166 (29%), Positives = 73/166 (43%) Frame = +2 Query: 323 PDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKV 502 PD RV + V + H+S N FV +A +AL +N + + +KV Sbjct: 45 PDSRRV-----NSSVGFSVLQHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV 97 Query: 503 DFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR 682 ++A Q S VFVG+L+ + + ++ FA + V+ T + Sbjct: 98 NWATTPSSQKKDTSNHFH---VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGK- 153 Query: 683 SAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNKS 820 S GYGFVSF +K +AE AI G+ L GR I + P KS Sbjct: 154 SKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 199
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 55.1 bits (131), Expect = 6e-07 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 1/157 (0%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALK 460 T LI +P D+T ++ LF G + + + + + G AFV SE ++ A+K Sbjct: 127 TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIK 186 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 LN T+ ++ +KV +A+P + ++ ++V NL + L +F + Sbjct: 187 VLNGITVRNKRLKVSYARPGGES-------IKDTNLYVTNLPRTITDDQLDTIFGKYGSI 239 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 ++ T R G FV ++ +EEA+ AIS N Sbjct: 240 VQKNILRDKLT-GRPRGVAFVRYNKREEAQEAISALN 275
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 55.1 bits (131), Expect = 6e-07 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 11/178 (6%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 T + N+ ++T + LF + G + + L + K RG FV + E A A+ Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDE 320 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV-----------FVGNLTWRVRSRHL 610 LN + + V A+ K ++ E+ + F+ NL V L Sbjct: 321 LNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERL 380 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + F++ + S +++ T +S G+GFV +++ EEA A++ N + L G+ + V Sbjct: 381 KAEFSAFGTITSAKIM--TDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYV 436 Score = 48.9 bits (115), Expect = 4e-05 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 17/199 (8%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRV----------------LFEKQGTVVD 370 E EA AE E T ++ P P + LF G V Sbjct: 49 EPEAAAEPSESTSTPTNASSVATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVAS 108 Query: 371 VELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSA 547 + + + ++++ G A+V + E+ AL LN + + R ++ +++ + P++ Sbjct: 109 IRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQ---RDPSLRKM 165 Query: 548 PVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEA 727 VF+ NL + ++ L + F++ + S +V + GYGFV F S E A Sbjct: 166 GTGN--VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELG--NAKGYGFVHFDSVESA 221 Query: 728 EAAISTFNGKELMGRSINV 784 AAI NG L + + V Sbjct: 222 NAAIEHVNGMLLNDKKVYV 240 Score = 47.0 bits (110), Expect = 2e-04 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Frame = +2 Query: 533 AVPSAPVEKNV-VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSF 709 A PS + ++VG L V L ELF S V S+ V T RRS GY +V+F Sbjct: 70 ATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVT-RRSLGYAYVNF 128 Query: 710 SSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKNK 817 + E+ E A+ N + GR +M+ + P K Sbjct: 129 HNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRK 164 Score = 34.7 bits (78), Expect = 0.77 Identities = 25/121 (20%), Positives = 52/121 (42%) Frame = +2 Query: 290 LIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLN 469 L N+ +V + ++ F GT+ ++ K++G FV + EEA A+ +N Sbjct: 366 LFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMN 425 Query: 470 LSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSV 649 L + + V A+ K+ + + A ++ F L++ A+ G+ +V Sbjct: 426 QRMLAGKPLYVALAQRKEVRRSQLEAQIQARNQF-----------RLQQQVAAAAGIPAV 474 Query: 650 E 652 + Sbjct: 475 Q 475
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 55.1 bits (131), Expect = 6e-07 Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 13/181 (7%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 + W+V + FE+ GT+V + M S +++G +V + E A +A+ + Sbjct: 270 LSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEI 329 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKN----------VVFVGNLTWRVRSRHLRELFAST 631 + R + +D + P+ P + N VFVGNL++ L F Sbjct: 330 DGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGC 389 Query: 632 PGVQSVEVIFHTTTPR--RSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTP 805 +QS+ + T P+ R G+G+V+FS + A+ + NG + GR + F TP Sbjct: 390 GDIQSIRL---PTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNGHFIAGRPCRLDF--STP 443 Query: 806 K 808 + Sbjct: 444 R 444 Score = 51.6 bits (122), Expect = 6e-06 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 10/108 (9%) Frame = +2 Query: 512 KPKKKQPAVPSAPV----------EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 K +K +PA P E VFVG L+W V + L + F + VI Sbjct: 237 KKRKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIM 296 Query: 662 HTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTP 805 + R S GYG+V F + E A+AA++ KE+ GR +N+ P Sbjct: 297 DGQSGR-SKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRP 343
>Q6CEW9:MRD1_YARLI Multiple RNA-binding domain-containing protein 1 - Yarrowia| lipolytica (Candida lipolytica) Length = 828 Score = 54.3 bits (129), Expect = 9e-07 Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 6/190 (3%) Frame = +2 Query: 245 EADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRG----- 409 + + DE P T + N+ + T + F+ + ++ M KN+G Sbjct: 592 DTGSNDERPATASTSVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSM 651 Query: 410 -LAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLT 586 FV S+E A A K ++ L+ +++ + + + + + + + NL Sbjct: 652 GFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQDEETTETKKAIDSKILIKNLP 711 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM 766 + + +++LF + +++V V + R G+ F + S +EAE A+S G L+ Sbjct: 712 FEATKKDVQKLFGAFGSLKTVRVPKKFNSESR--GFAFAEYVSAKEAEHAMSALQGTHLL 769 Query: 767 GRSINVMFKE 796 GR + + + + Sbjct: 770 GRRLVLQYAQ 779 Score = 44.3 bits (103), Expect = 0.001 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 6/123 (4%) Frame = +2 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKP--KKKQPAVPSAPVEKNVVFVGNLTWRVRSRH 607 E + + +K + T+ D+ D ++PA S V FV NL ++ SR Sbjct: 566 ESDEVEHVKQDKIVTIEDKLSASDVMDTGSNDERPATASTSV-----FVKNLNFKTTSRV 620 Query: 608 LRELFASTPGVQSVEVIFHTTTPRR----SAGYGFVSFSSKEEAEAAISTFNGKELMGRS 775 L + F + G +V + + S G+GFV FSSKE AE A +G L G Sbjct: 621 LTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEAAEIAQKAMDGHVLDGHK 680 Query: 776 INV 784 + + Sbjct: 681 LQL 683
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 54.3 bits (129), Expect = 9e-07 Identities = 32/72 (44%), Positives = 41/72 (56%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W + L + FA+ V +VI T R S G+GFV+FSS++ AI Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGR-SRGFGFVTFSSEQSMLDAIENM 69 Query: 749 NGKELMGRSINV 784 NGKEL GR+I V Sbjct: 70 NGKELDGRNITV 81 Score = 40.8 bits (94), Expect = 0.011 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W + + F G V+D + ++ + ++RG FVT SE+ L A++N Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R I V+ A+ + Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>Q923K9:ACF_RAT APOBEC1 complementation factor - Rattus norvegicus (Rat)| Length = 594 Score = 54.3 bits (129), Expect = 9e-07 Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 2/146 (1%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL-NLSTL 481 +P D+ D++ L EK G + ++ + M + NRG AFVT +++EA +A+K L N Sbjct: 63 LPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYEIR 122 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLRELFASTPGVQSVEVI 658 N R + V A V+ +FVG + + R L E+ T GV V V Sbjct: 123 NGRLLGV-------------CASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVY 169 Query: 659 FHTTTPRRSAGYGFVSFSSKEEAEAA 736 ++ G+ FV + S A A Sbjct: 170 PSAADKTKNRGFAFVEYESHRAAAMA 195 Score = 46.6 bits (109), Expect = 2e-04 Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +2 Query: 362 VVDVEL--SMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLN--DRTIKVDFAKPKKKQ 529 VVDV + S KNRG AFV S A A + L + I VD+A+P+ + Sbjct: 163 VVDVIVYPSAADKTKNRGFAFVEYESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEV 222 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST-PGVQSVEVIFHTTTPRRSAGYGFVS 706 + V+ +++V NL + + F S PG +VE + ++ Y FV Sbjct: 223 DEDTMSSVK--ILYVRNLMLSTSEEMIEKEFNSIKPG--AVERV------KKIRDYAFVH 272 Query: 707 FSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 FS++E+A A+ NGK L G I V + K Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 306 Score = 35.0 bits (79), Expect = 0.59 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = +2 Query: 395 KKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAV 538 KK R AFV + E+A+ A+K LN L+ I+V AKP K V Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYV 310 Score = 32.3 bits (72), Expect = 3.8 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Frame = +2 Query: 530 PAVPSAPVEKNV-VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVS 706 P + P E+ +F+G L + L L + + ++ R GY FV+ Sbjct: 45 PGWDTTPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNR--GYAFVT 102 Query: 707 FSSKEEAEAAISTFNGKELM-GRSINVMFKED 799 FS+K+EA+ AI N E+ GR + V D Sbjct: 103 FSNKQEAKNAIKQLNNYEIRNGRLLGVCASVD 134
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 53.9 bits (128), Expect = 1e-06 Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + + T + +R +E+ G + D V + +SK++RG FVT S E +A+ Sbjct: 10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA- 68 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 +++ R ++ A +++ P A V +FVG + HLR+ FA + Sbjct: 69 ARPHSIDGRVVEPKRAVAREES-GKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKID 127 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 ++E+I + ++ G+GFV+F + + + T NG Sbjct: 128 TIEIITDRQSGKK-RGFGFVTFDDHDPVDKIVLQKYHTING 167
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 53.9 bits (128), Expect = 1e-06 Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 9/171 (5%) Frame = +2 Query: 254 AEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVT 424 ++ E P P+ +L + ++ T + +R FE+ GT+ D V + ++K++RG FVT Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGNLT 586 + EE +A+ N R KVD +PK+ + P A + +FVG + Sbjct: 62 YATVEEVDAAM--------NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIK 113 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 HLR+ F ++ +E++ + ++ G+ FV+F + + + Sbjct: 114 EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKK-RGFAFVTFDDHDSVDKIV 163
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 53.9 bits (128), Expect = 1e-06 Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 9/171 (5%) Frame = +2 Query: 254 AEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVT 424 ++ E P P+ +L + ++ T + +R FE+ GT+ D V + ++K++RG FVT Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGNLT 586 + EE +A+ N R KVD +PK+ + P A + +FVG + Sbjct: 62 YATVEEVDAAM--------NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIK 113 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 HLR+ F ++ +E++ + ++ G+ FV+F + + + Sbjct: 114 EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKK-RGFAFVTFDDHDSVDKIV 163
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 53.9 bits (128), Expect = 1e-06 Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 9/171 (5%) Frame = +2 Query: 254 AEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVT 424 ++ E P P+ +L + ++ T + +R FE+ GT+ D V + ++K++RG FVT Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGNLT 586 + EE +A+ N R KVD +PK+ + P A + +FVG + Sbjct: 62 YATVEEVDAAM--------NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIK 113 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 HLR+ F ++ +E++ + ++ G+ FV+F + + + Sbjct: 114 EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKK-RGFAFVTFDDHDSVDKIV 163
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 53.9 bits (128), Expect = 1e-06 Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 9/171 (5%) Frame = +2 Query: 254 AEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVT 424 ++ E P P+ +L + ++ T + +R FE+ GT+ D V + ++K++RG FVT Sbjct: 1 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 60 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGNLT 586 + EE +A+ N R KVD +PK+ + P A + +FVG + Sbjct: 61 YATVEEVDAAM--------NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIK 112 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 HLR+ F ++ +E++ + ++ G+ FV+F + + + Sbjct: 113 EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKK-RGFAFVTFDDHDSVDKIV 162
>P37838:NOP4_YEAST Nucleolar protein 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 685 Score = 53.9 bits (128), Expect = 1e-06 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 1/109 (0%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVT-PDDIRVLFEKQGTVVDVELSMHSSKKNRGLA 415 E +AD ED G K +LI N+PW P ++ +F + GTVV+ + K G A Sbjct: 133 EDDADGEDSMLKG-KPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLCGFA 191 Query: 416 FVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKN 562 FVTM AL+N ++ R + VDFA K + A E N Sbjct: 192 FVTMKKISNCRIALENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMN 240 Score = 42.7 bits (99), Expect = 0.003 Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 30/208 (14%) Frame = +2 Query: 257 EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSE 436 ++++ + KT L +IP DVT + + F + + ++K++RG FV+ E Sbjct: 18 QNDDGLDMKT-LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVE 76 Query: 437 EEALSALKNLNLSTLNDRTIKVDFAK----PKKKQPAVPSAPVE---------------- 556 ++ AL + N ++VD AK KK V + E Sbjct: 77 DDTKEALAKARKTKFNGHILRVDIAKRRDRSKKTSEVVEKSTPESSEKITGQNNEDEDDA 136 Query: 557 ---------KNVVFVGNLTWRVRSR-HLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVS 706 K + + N+ W R L+++F V VE + G+ FV+ Sbjct: 137 DGEDSMLKGKPKLIIRNMPWSCRDPVKLKKIFGRYGTV--VEATIPRKRDGKLCGFAFVT 194 Query: 707 FSSKEEAEAAISTFNGKELMGRSINVMF 790 A+ ++ GR + V F Sbjct: 195 MKKISNCRIALENTKDLKIDGRKVAVDF 222 Score = 35.0 bits (79), Expect = 0.59 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 13/105 (12%) Frame = +2 Query: 536 VPSAPVEKN--------VVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAG 691 VPS+ V K +FV ++ V L + F++ ++ V+ T +RS G Sbjct: 10 VPSSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTN--KRSRG 67 Query: 692 YGFVSFSSKEEAEAAI-----STFNGKELMGRSINVMFKEDTPKK 811 +GFVSF+ +++ + A+ + FNG L +++ + D KK Sbjct: 68 FGFVSFAVEDDTKEALAKARKTKFNGHIL---RVDIAKRRDRSKK 109
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 53.9 bits (128), Expect = 1e-06 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 5/182 (2%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGT-VVDVEL--SMHSSKKNRGLAFVTMGSEEEALSAL 457 RL +IP + T ++I F K +VDV L KKNRG F+ + A A Sbjct: 247 RLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQAR 306 Query: 458 KNLNLSTLN--DRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST 631 + L + + V++A P ++ P + V+FV NL V L + F+ Sbjct: 307 RRLMSGKVKVWGNVVTVEWADPVEEPD--PEVMAKVKVLFVRNLATTVTEEILEKSFSEF 364 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 ++ V ++ Y FV F + A A+ NGKE+ G I ++ + KK Sbjct: 365 GKLERV---------KKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKK 415 Query: 812 NK 817 K Sbjct: 416 RK 417 Score = 48.5 bits (114), Expect = 5e-05 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 3/164 (1%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALS 451 G T + IP D+ D++ LFEK G + D+ L M S +NRG AF+T +E A Sbjct: 162 GIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQE 221 Query: 452 ALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAS- 628 A+K + + +P K S V N +FVG++ ++ E F+ Sbjct: 222 AVKLCDSYEI----------RPGKHLGVCIS--VANNRLFVGSIPKNKTKENILEEFSKV 269 Query: 629 TPGVQSVEVIFHTTTPRRSAGYGFVSFSS-KEEAEAAISTFNGK 757 T G+ V + +++ G+ F+ + K A+A +GK Sbjct: 270 TEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGK 313
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 53.9 bits (128), Expect = 1e-06 Identities = 32/72 (44%), Positives = 39/72 (54%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W + L FAS + +VI T R S G+GFV+FSS+ AI Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGR-SRGFGFVTFSSENSMLDAIENM 69 Query: 749 NGKELMGRSINV 784 NGKEL GR+I V Sbjct: 70 NGKELDGRNITV 81 Score = 40.0 bits (92), Expect = 0.018 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W + + + F G ++D + ++ + ++RG FVT SE L A++N Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R I V+ A+ + Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>O43040:CTF1_SCHPO Cleavage and termination factor 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 363 Score = 53.9 bits (128), Expect = 1e-06 Identities = 29/87 (33%), Positives = 44/87 (50%) Frame = +2 Query: 560 NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 NVVFVGN+ + V + + E+F V++ +++ T GYGF F E A+ Sbjct: 7 NVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPET-GSGKGYGFCEFFDSETTAMAV 65 Query: 740 STFNGKELMGRSINVMFKEDTPKKNKS 820 N EL R I V F + P++N+S Sbjct: 66 RKLNNSELGPRKIRVEFPSNDPRRNQS 92 Score = 37.0 bits (84), Expect = 0.16 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP+DV+ + +F + G V +L + + +G F E A++ LN S Sbjct: 13 NIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNNSE 72 Query: 479 LNDRTIKVDFAK--PKKKQ 529 L R I+V+F P++ Q Sbjct: 73 LGPRKIRVEFPSNDPRRNQ 91
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 53.9 bits (128), Expect = 1e-06 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L IP ++ D++ LFE+ G + ++ L + ++G AF+T + + A+ A Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQ-- 105 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 + L+++ A+P + +PA + +FVG L+ + + +F + ++ Sbjct: 106 ---TALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIE 162 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINVMFK-EDTPKK 811 V+ S G FV FSS EA+AAI +G + M G S +++ K DT K+ Sbjct: 163 ECSVL--RGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKE 218 Score = 33.1 bits (74), Expect = 2.2 Identities = 20/76 (26%), Positives = 35/76 (46%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ +L L ++F + S +V T +S +GFVSF + A+ AI Sbjct: 403 LFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRAT-NQSKCFGFVSFDNPSSAQTAIQA 461 Query: 746 FNGKELMGRSINVMFK 793 NG ++ + + V K Sbjct: 462 MNGFQIGMKRLKVQLK 477
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 53.5 bits (127), Expect = 2e-06 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 4/155 (2%) Frame = +2 Query: 335 RVLFEKQGTV----VDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKV 502 R L +GT+ ++ +H +KN A+V E A ALK + I+V Sbjct: 217 RSLIPAEGTLSKKLAAIKRKIHPDQKNIN-AYVVFKEESAATQALKRNGAQIADGFRIRV 275 Query: 503 DFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR 682 D A + +K VFVGNL ++V + + F + +V ++ T Sbjct: 276 DLASETSSR--------DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMT-GI 326 Query: 683 SAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVM 787 G+G+V F + + A+ N ELMGR + VM Sbjct: 327 GKGFGYVLFENTDSVHLALK-LNNSELMGRKLRVM 360
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 53.5 bits (127), Expect = 2e-06 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 + W +PD +R F K G + + + + ++K++RG FVT ++ ++ + L Sbjct: 28 LSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF-ADPASVDKVLGQPHHEL 86 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 + +TI A P++ QP + + +FVG L+ +++ F V+ ++F Sbjct: 87 DSKTIDPKVAFPRRAQPKMVT---RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMF 143 Query: 662 HTTTPRRSAGYGFVSFSSKEEAE 730 TT R G+GFV+F +++ E Sbjct: 144 DKTT-NRHRGFGFVTFENEDVVE 165 Score = 36.2 bits (82), Expect = 0.27 Identities = 17/58 (29%), Positives = 32/58 (55%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 +F+G L+W+ LR+ F+ ++ V+ TT +RS G+GFV+F+ + + Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTT-KRSRGFGFVTFADPASVDKVL 79
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 53.5 bits (127), Expect = 2e-06 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 + W +PD +R F K G + + + + ++K++RG FVT ++ ++ + L Sbjct: 28 LSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF-ADPASVDKVLGQPHHEL 86 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 + +TI A P++ QP + + +FVG L+ +++ F V+ ++F Sbjct: 87 DSKTIDPKVAFPRRAQPKMVT---RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMF 143 Query: 662 HTTTPRRSAGYGFVSFSSKEEAE 730 TT R G+GFV+F +++ E Sbjct: 144 DKTT-NRHRGFGFVTFENEDVVE 165 Score = 36.2 bits (82), Expect = 0.27 Identities = 17/58 (29%), Positives = 32/58 (55%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 +F+G L+W+ LR+ F+ ++ V+ TT +RS G+GFV+F+ + + Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTT-KRSRGFGFVTFADPASVDKVL 79
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 53.1 bits (126), Expect = 2e-06 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 5/157 (3%) Frame = +2 Query: 329 DIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL--KNLNLSTLNDRTIKV 502 +I V T+ + S K N+G FV S A +AL + + ++ +K+ Sbjct: 81 NINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLKNGMLIPNFPNKKLKL 140 Query: 503 DFAKPKKKQPAVPSAPVEKN---VVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTT 673 ++A V+ +FVG+L V L ELF + S I H Sbjct: 141 NWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQV 200 Query: 674 PRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 S GYGFV F++ +E + A+S G L GR+I V Sbjct: 201 TGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKV 237
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 52.8 bits (125), Expect = 3e-06 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ T + +R +E+ G + D V + +SK++RG FVT S E +A+ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA- 80 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 +++ R ++ A +++ P A V +FVG + HLR+ F + Sbjct: 81 ARPHSIDGRVVEPKRAVAREES-GKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 139 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 ++E+I + ++ G+GFV+F + + + T NG Sbjct: 140 TIEIITDRQSGKK-RGFGFVTFDDHDPVDKIVLQKHHTING 179
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus| (Mouse) Length = 353 Score = 52.8 bits (125), Expect = 3e-06 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ T + +R +E+ G + D V + +SK++RG FVT S E +A+ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA- 80 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 +++ R ++ A +++ P A V +FVG + HLR+ F + Sbjct: 81 ARPHSIDGRVVEPKRAVAREES-GKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 139 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 ++E+I + ++ G+GFV+F + + + T NG Sbjct: 140 TIEIITDRQSGKK-RGFGFVTFDDHDPVDKIVLQKYHTING 179
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens| (Human) Length = 353 Score = 52.8 bits (125), Expect = 3e-06 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ T + +R +E+ G + D V + +SK++RG FVT S E +A+ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA- 80 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 +++ R ++ A +++ P A V +FVG + HLR+ F + Sbjct: 81 ARPHSIDGRVVEPKRAVAREES-GKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 139 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 ++E+I + ++ G+GFV+F + + + T NG Sbjct: 140 TIEIITDRQSGKK-RGFGFVTFDDHDPVDKIVLQKYHTING 179
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus| (Bovine) Length = 341 Score = 52.8 bits (125), Expect = 3e-06 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ T + +R +E+ G + D V + +SK++RG FVT S E +A+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA- 68 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 +++ R ++ A +++ P A V +FVG + HLR+ F + Sbjct: 69 ARPHSIDGRVVEPKRAVAREES-GKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 127 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 ++E+I + ++ G+GFV+F + + + T NG Sbjct: 128 TIEIITDRQSGKK-RGFGFVTFDDHDPVDKIVLQKYHTING 167
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus| laevis (African clawed frog) Length = 385 Score = 52.8 bits (125), Expect = 3e-06 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Frame = +2 Query: 248 ADAEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAF 418 +D + EP P+ +L + ++ T D +R FE+ G + D V + +K++RG F Sbjct: 13 SDDQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGF 72 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGN 580 VT EE +++ + R KVD +PK+ + A P A + +FVG Sbjct: 73 VTYSCVEEVDASM--------SARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGG 124 Query: 581 LTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 + HLR+ F ++++EV+ + ++ G+ FV+F + + + Sbjct: 125 IKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKK-RGFAFVTFDDHDTVDKIV 176
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 52.8 bits (125), Expect = 3e-06 Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 13/200 (6%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKK------ 400 +T A + +EPV T L N+ + T + +F+ V + K Sbjct: 583 DTFAAEDGDEPVVTST-LFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTL 641 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKV-------DFAKPKKKQPAVPSAPVEK 559 + G FV ++ +A +AL ++ L+ + V D A+ ++++ + Sbjct: 642 SMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAEERRREDTAKKIAARR 701 Query: 560 NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 + + NL ++ + +R LF + ++SV V R + G+GF F S EAE A+ Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRV--PKKFDRSARGFGFADFVSAREAENAM 759 Query: 740 STFNGKELMGRSINVMFKED 799 L+GR + + F + Sbjct: 760 DALKNTHLLGRRLVLEFANE 779 Score = 52.4 bits (124), Expect = 4e-06 Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 38/214 (17%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFE-----------KQGTVVDVELSM--HSSKKNRGLAFVT 424 T ++ N + V DD+R LFE GT+ VE + + K +GLA+ Sbjct: 484 TAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIVEFARPDEAQKAFKGLAYRK 543 Query: 425 MGSE----EEA----LSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGN 580 +G E+A A S L + + F+ PV + +FV N Sbjct: 544 VGDSILFLEKAPANLFDATTAPQTSVLETKAVSQGFSTADTFAAEDGDEPVVTSTLFVKN 603 Query: 581 LTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR-----SAGYGFVSFSSKEEAEAAIST 745 L + + E+F G S I P+R S G+GFV F +K +A+AA++ Sbjct: 604 LNFSTTNERFTEVFKPLDGFVSAR-IKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAA 662 Query: 746 FNG-----KELMGRSINVMF-------KEDTPKK 811 +G EL+ R+ N +EDT KK Sbjct: 663 MDGYKLDQHELVVRASNKAMDAAEERRREDTAKK 696 Score = 46.6 bits (109), Expect = 2e-04 Identities = 27/95 (28%), Positives = 44/95 (46%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 +T++I N+P+ T D+R LF G + V + + RG F S EA +A+ Sbjct: 701 RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMD 760 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV 565 L + L R + ++FA + P +EK V Sbjct: 761 ALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEKKV 795
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 52.8 bits (125), Expect = 3e-06 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 2/171 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L IP + D++ LFE+ G + ++ L + ++G AF+T + + AL A Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQ-- 104 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 S L+++ +P + +PA E +FVG L + +R LF ++ Sbjct: 105 ---SALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINVMFK 793 V+ + S G FV F S+ EA+AAI +G M G S +++ K Sbjct: 162 ECTVL--RSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVK 210 Score = 31.6 bits (70), Expect = 6.5 Identities = 21/76 (27%), Positives = 34/76 (44%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ +L L + F V S +V T +S +GFVSF + A+ AI Sbjct: 377 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRAT-NQSKCFGFVSFDNPTSAQTAIQA 435 Query: 746 FNGKELMGRSINVMFK 793 NG ++ + + V K Sbjct: 436 MNGFQIGMKRLKVQLK 451
>Q9NQ94:ACF_HUMAN APOBEC1 complementation factor - Homo sapiens (Human)| Length = 594 Score = 52.8 bits (125), Expect = 3e-06 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 2/146 (1%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL-NLSTL 481 +P D+ D++ L EK G + ++ + M + NRG AFVT ++ EA +A+K L N Sbjct: 63 LPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEIR 122 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLRELFASTPGVQSVEVI 658 N R + V A V+ +FVG + + R L E+ T GV V V Sbjct: 123 NGRLLGV-------------CASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVY 169 Query: 659 FHTTTPRRSAGYGFVSFSSKEEAEAA 736 ++ G+ FV + S A A Sbjct: 170 PSAADKTKNRGFAFVEYESHRAAAMA 195 Score = 45.1 bits (105), Expect = 6e-04 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +2 Query: 362 VVDVEL--SMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLN--DRTIKVDFAKPKKKQ 529 VVDV + S KNRG AFV S A A + L + I VD+A+P+ + Sbjct: 163 VVDVIVYPSAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEV 222 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST-PGVQSVEVIFHTTTPRRSAGYGFVS 706 + V+ +++V NL + + F + PG +VE + ++ Y FV Sbjct: 223 DEDTMSSVK--ILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV------KKIRDYAFVH 272 Query: 707 FSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 FS++E+A A+ NGK L G I V + K Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 306 Score = 35.0 bits (79), Expect = 0.59 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = +2 Query: 395 KKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAV 538 KK R AFV + E+A+ A+K LN L+ I+V AKP K V Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYV 310
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 52.4 bits (124), Expect = 4e-06 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 2/171 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L IP + D++ LFE+ G + ++ L + ++G AF+T + + AL A Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQ-- 104 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 S L+++ +P + +PA E +FVG L + +R LF ++ Sbjct: 105 ---SALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINVMFK 793 V+ + S G FV F S+ EA+AAI +G M G S +++ K Sbjct: 162 ECTVL--RSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVK 210 Score = 31.6 bits (70), Expect = 6.5 Identities = 21/76 (27%), Positives = 34/76 (44%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ +L L + F V S +V T +S +GFVSF + A+ AI Sbjct: 398 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRAT-NQSKCFGFVSFDNPTSAQTAIQA 456 Query: 746 FNGKELMGRSINVMFK 793 NG ++ + + V K Sbjct: 457 MNGFQIGMKRLKVQLK 472
>Q5R9H4:ACF_PONPY APOBEC1 complementation factor - Pongo pygmaeus (Orangutan)| Length = 587 Score = 52.4 bits (124), Expect = 4e-06 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 2/146 (1%) Frame = +2 Query: 305 IPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL-NLSTL 481 +P D+ D++ L EK G + ++ + M + NRG AFVT ++ EA +A+K L N Sbjct: 63 LPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKLEAKNAIKQLNNYEIR 122 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLRELFASTPGVQSVEVI 658 N R + V A V+ +FVG + + R L E+ T GV V V Sbjct: 123 NGRLLGV-------------CASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVY 169 Query: 659 FHTTTPRRSAGYGFVSFSSKEEAEAA 736 ++ G+ FV + S A A Sbjct: 170 PSAADKTKNRGFAFVEYESHRAAAMA 195 Score = 45.4 bits (106), Expect = 4e-04 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +2 Query: 362 VVDVEL--SMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLN--DRTIKVDFAKPKKKQ 529 VVDV + S KNRG AFV S A A + L + I VD+A+P+ + Sbjct: 163 VVDVIVYPSAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEV 222 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST-PGVQSVEVIFHTTTPRRSAGYGFVS 706 + V+ +++V NL + + F + PG +VE + ++ Y FV Sbjct: 223 DEDTMSSVK--ILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV------KKIRDYAFVH 272 Query: 707 FSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 FS++E+A A+ NGK L G I V + K Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 306 Score = 35.0 bits (79), Expect = 0.59 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = +2 Query: 395 KKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAV 538 KK R AFV + E+A+ A+K LN L+ I+V AKP K V Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYV 310
>Q10422:YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01 - Schizosaccharomyces| pombe (Fission yeast) Length = 297 Score = 52.0 bits (123), Expect = 5e-06 Identities = 36/140 (25%), Positives = 68/140 (48%) Frame = +2 Query: 365 VDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPS 544 +++E + + G + + + A L+++N ++ K K+ Q A Sbjct: 37 LEIEKDAGETDSDAGSIAMNVHQLDTAGEPLQSMNEDEVDPNNESTALDK-KEPQSAPEG 95 Query: 545 APVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEE 724 + N +FV + R++ L+++F+ V V ++ T + S G+GF+SFS+ EE Sbjct: 96 SENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVT-KASRGFGFLSFSTVEE 154 Query: 725 AEAAISTFNGKELMGRSINV 784 A +AI N +E GR +NV Sbjct: 155 ATSAIDNLNSQEFYGRVLNV 174 Score = 44.7 bits (104), Expect = 7e-04 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLA 415 E ++ E E +G L I + D+++ +F K GTV V + +K +RG Sbjct: 88 EPQSAPEGSENLG--NDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFG 145 Query: 416 FVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVP 541 F++ + EEA SA+ NLN R + V AK + P Sbjct: 146 FLSFSTVEEATSAIDNLNSQEFYGRVLNVQKAKRSRPHSPTP 187
>Q4PC17:MRD1_USTMA Multiple RNA-binding domain-containing protein 1 - Ustilago maydis| (Smut fungus) Length = 858 Score = 52.0 bits (123), Expect = 5e-06 Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 2/131 (1%) Frame = +2 Query: 392 SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVF 571 ++ + G FV S + A +A K ++ L+ T+ V FA+ + + + Sbjct: 663 ARLSMGYGFVGFKSIDAARTAQKAMDGKVLDAHTLVVTFARRNAEASTTSISSGGSTKIL 722 Query: 572 VGNLTWRVRSRHLRELFASTPGVQSVEV--IFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 + NL + R +R+LF+S ++SV + F TT G+GFV +S+ EA++A+ Sbjct: 723 IKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTT----RGFGFVEYSTVREAQSAMEA 778 Query: 746 FNGKELMGRSI 778 L+GR + Sbjct: 779 LKHTHLLGRHL 789 Score = 45.4 bits (106), Expect = 4e-04 Identities = 25/79 (31%), Positives = 40/79 (50%) Frame = +2 Query: 275 GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSA 454 G T+++ N+P++ T DIR LF QG + V L RG FV + EA SA Sbjct: 716 GGSTKILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSA 775 Query: 455 LKNLNLSTLNDRTIKVDFA 511 ++ L + L R + + ++ Sbjct: 776 MEALKHTHLLGRHLVLQWS 794 Score = 42.7 bits (99), Expect = 0.003 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +2 Query: 245 EADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFV 421 E D + + + RL N+P+ + D+I FE GTV V + + +K ++GLAFV Sbjct: 301 EKDQKLVDQIMESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFV 360 Query: 422 TMGSEEEALSALKNLNLSTLNDRTI 496 + AL+A + + ST R + Sbjct: 361 SFSDPAHALAAYRAKDGSTFQGRLL 385
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 51.6 bits (122), Expect = 6e-06 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 9/170 (5%) Frame = +2 Query: 257 EDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTM 427 + E P P+ +L + ++ T + +R FE+ GT+ D V + +SK++RG FVT Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62 Query: 428 GSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGNLTW 589 S +E +A+ R KVD +PK+ + + P A + +FVG + Sbjct: 63 LSTDEVDAAM--------TARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKE 114 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 HLRE F ++ +E++ + ++ G+ FV+F + + + Sbjct: 115 DTEEDHLREYFEQYGKIEVIEIMTDRGSGKK-RGFAFVTFEDHDSVDKIV 163
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 51.6 bits (122), Expect = 6e-06 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 9/171 (5%) Frame = +2 Query: 254 AEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVT 424 ++ E P P+ +L + ++ T + +R FE+ GT+ D V + ++K++RG FVT Sbjct: 2 SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 61 Query: 425 MGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGNLT 586 + E+ +A+ N R KVD +PK+ + P A + +FVG + Sbjct: 62 YATVEKVDAAM--------NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIK 113 Query: 587 WRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 HLR+ F ++ +E++ + ++ G+ FV+F + + Sbjct: 114 EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKK-RGFAFVTFDDHNSVDKIV 163
>P34167:IF4B_YEAST Eukaryotic translation initiation factor 4B - Saccharomyces| cerevisiae (Baker's yeast) Length = 436 Score = 51.6 bits (122), Expect = 6e-06 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 8/100 (8%) Frame = +2 Query: 248 ADAEDEEPV--GPKTRLIAMNIPWDVTPDDIRVLFE----KQGTVVDVEL--SMHSSKKN 403 +D +E PV P R + NIPWD+TP+ ++ E K V +V L ++ + Sbjct: 87 SDRREEYPVPDAPPYRAVINNIPWDITPEGVQAWVEDGLVKPEAVEEVVLPKNLRDPTRL 146 Query: 404 RGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKK 523 +G AFVT+ + ++ LK N + LN+RT+ V A P++ Sbjct: 147 KGNAFVTLKERADLVAVLK-FNGTKLNERTVYVSVAAPRR 185
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 51.6 bits (122), Expect = 6e-06 Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 3/178 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKN 463 +L IP ++ D++ +FE+ G + ++ + + ++G AF+T + E AL A Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQ-- 65 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 S L+++ +P + +PA + E +FVG L + +R +F + + Sbjct: 66 ---SALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNID 122 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNG-KELMGRSINVMFK-EDTPKK 811 V+ S G FV F + EA+AAI+ +G + L G S +++ K DT K+ Sbjct: 123 ECTVL--RGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKE 178 Score = 34.7 bits (78), Expect = 0.77 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ +L + ++F V S +V T +S +GFVSF + A+AAI + Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRAT-NQSKCFGFVSFDNPGSAQAAIQS 437 Query: 746 FNGKELMGRSINVMFK 793 NG ++ + + V K Sbjct: 438 MNGFQIGMKRLKVQLK 453
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 51.2 bits (121), Expect = 8e-06 Identities = 40/139 (28%), Positives = 61/139 (43%) Frame = +2 Query: 371 VELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAP 550 ++ H +K+ A+V E A AL+ I+VD A +A Sbjct: 231 IKRKFHPDQKSIN-AYVVFKEERAAAKALQRNGAQIAEGFRIRVDLASE--------TAS 281 Query: 551 VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAE 730 +K VFVGNL +RV L E F + +V ++ + T G+G+V F + + Sbjct: 282 RDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLT-GVGRGFGYVLFENTDAVH 340 Query: 731 AAISTFNGKELMGRSINVM 787 A+ N ELMGR + VM Sbjct: 341 LALK-LNNSELMGRKLRVM 358
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 50.8 bits (120), Expect = 1e-05 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 3/197 (1%) Frame = +2 Query: 239 ETEADA--EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRG 409 ET+A + + + V + LI + +PW T D++ F G V+ V++ + ++G Sbjct: 87 ETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKG 146 Query: 410 LAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTW 589 FV E + + ++ ++ R K+ Q P+ VFVG T Sbjct: 147 FGFVRFTEYETQVKVMSQRHM--IDGRWCDCKLPNSKQSQ----DEPLRSRKVFVGRCTE 200 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMG 769 + LRE F+ V V + P+ + FV+F+ + A++ G++L+ Sbjct: 201 DMTEDELREFFSQYGDVMDVFI------PKPFRAFAFVTFADDQIAQSLC----GEDLII 250 Query: 770 RSINVMFKEDTPKKNKS 820 + I+V PK N + Sbjct: 251 KGISVHISNAEPKHNSN 267
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus| (Rat) Length = 379 Score = 50.8 bits (120), Expect = 1e-05 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%) Frame = +2 Query: 257 EDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTM 427 E +P P+ +L + ++ T D +R FEK GT+ D V + +K++RG FVT Sbjct: 24 EGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTY 83 Query: 428 GSEEEALSALKNLNLSTLNDRTIKVD--FAKPK----KKQPAVPSAPVEKNVVFVGNLTW 589 EE +A + R KVD +PK ++ P A + +FVG + Sbjct: 84 SCVEEVDAA--------MCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKE 135 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 +LR+ F ++++EV+ + ++ G+ FV+F + + + T NG Sbjct: 136 DTEEYNLRDYFEKYGKIETIEVMEDRQSGKK-RGFAFVTFDDHDTVDKIVVQKYHTING 193
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 50.8 bits (120), Expect = 1e-05 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%) Frame = +2 Query: 257 EDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTM 427 E +P P+ +L + ++ T D +R FEK GT+ D V + +K++RG FVT Sbjct: 24 EGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTY 83 Query: 428 GSEEEALSALKNLNLSTLNDRTIKVD--FAKPK----KKQPAVPSAPVEKNVVFVGNLTW 589 EE +A + R KVD +PK ++ P A + +FVG + Sbjct: 84 SCVEEVDAA--------MCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKE 135 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 +LR+ F ++++EV+ + ++ G+ FV+F + + + T NG Sbjct: 136 DTEEYNLRDYFEKYGKIETIEVMEDRQSGKK-RGFAFVTFDDHDTVDKIVVQKYHTING 193
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 50.8 bits (120), Expect = 1e-05 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%) Frame = +2 Query: 257 EDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAFVTM 427 E +P P+ +L + ++ T D +R FEK GT+ D V + +K++RG FVT Sbjct: 24 EGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTY 83 Query: 428 GSEEEALSALKNLNLSTLNDRTIKVD--FAKPK----KKQPAVPSAPVEKNVVFVGNLTW 589 EE +A + R KVD +PK ++ P A + +FVG + Sbjct: 84 SCVEEVDAA--------MCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKE 135 Query: 590 RVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STFNG 754 +LR+ F ++++EV+ + ++ G+ FV+F + + + T NG Sbjct: 136 DTEEYNLRDYFEKYGKIETIEVMEDRQSGKK-RGFAFVTFDDHDTVDKIVVQKYHTING 193
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila| melanogaster (Fruit fly) Length = 385 Score = 50.8 bits (120), Expect = 1e-05 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 1/152 (0%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKN 463 +L + + T D ++ FEK G +VDV + +K++RG F+T S+ + +N Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY-SQSYMIDNAQN 83 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 ++ RT++ A P+++ + P+A +FVG L LRE F + Sbjct: 84 ARPHKIDGRTVEPKRAVPRQEIDS-PNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIV 142 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 SV ++ T ++ G+ F+ F + + I Sbjct: 143 SVNIVSDKDTGKK-RGFAFIEFDDYDPVDKII 173
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus| laevis (African clawed frog) Length = 373 Score = 50.4 bits (119), Expect = 1e-05 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 13/182 (7%) Frame = +2 Query: 248 ADAEDEEPVGPKT--RLIAMNIPWDVTPDDIRVLFEKQGTVVD-VELSMHSSKKNRGLAF 418 +D + +P P+ +L + ++ T D +R FE+ G + D V + +K++RG F Sbjct: 13 SDDQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGF 72 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVD--FAKPKK----KQPAVPSAPVEKNVVFVGN 580 VT EE +++ + R KVD +PK+ + A P A + +FVG Sbjct: 73 VTYSCVEEVDASM--------SARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGG 124 Query: 581 LTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI----STF 748 + HLR+ S ++++EV+ + ++ G+ FV+F + + + T Sbjct: 125 IKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKK-RGFAFVTFDDHDTVDKIVVQKYHTI 183 Query: 749 NG 754 NG Sbjct: 184 NG 185
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 50.4 bits (119), Expect = 1e-05 Identities = 38/139 (27%), Positives = 61/139 (43%) Frame = +2 Query: 371 VELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAP 550 ++ H +K+ A+V E A AL+ I+VD A +A Sbjct: 237 IKRKFHPDQKSIN-AYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASE--------TAS 287 Query: 551 VEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAE 730 +K VFVGNL +++ L E F + +V ++ + T G+G+V F + + Sbjct: 288 RDKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLT-GVGRGFGYVLFENTDAVH 346 Query: 731 AAISTFNGKELMGRSINVM 787 A+ N ELMGR + VM Sbjct: 347 LALK-LNNSELMGRKLRVM 364
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 50.4 bits (119), Expect = 1e-05 Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALKN 463 R+ +I +++ D IRV F G + + +S ++K++G AFV E A AL+ Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK----NVVFVGNLTWRVRSRHLRELFAST 631 +N + + R IKV + V E+ N ++V ++ + ++ +F + Sbjct: 191 MNGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVFEAF 250 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + ++ T+ GYGF+ +++K+ + AI++ N +L G+ + V Sbjct: 251 GPILYCKLA-QGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRV 300 Score = 37.7 bits (86), Expect = 0.091 Identities = 20/81 (24%), Positives = 42/81 (51%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 V+VG++++ ++ +R F ++S+ + + T + G+ FV + E A+ A+ Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHK-GFAFVEYEIPEGAQLALEQ 190 Query: 746 FNGKELMGRSINVMFKEDTPK 808 NG + GR+I V + P+ Sbjct: 191 MNGALMGGRNIKVGRPSNMPQ 211 Score = 32.3 bits (72), Expect = 3.8 Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = +2 Query: 257 EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSS-KKNRGLAFVTMGS 433 E +E R+ +I D++ +DI+ +FE G ++ +L+ +S ++G F+ + Sbjct: 218 EVQEEAKSFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYAN 277 Query: 434 EEEALSALKNLNLSTLNDRTIKV 502 ++ A+ ++NL L + ++V Sbjct: 278 KQAMDEAIASMNLFDLGGQLLRV 300
>Q10572:FOX1_CAEEL Sex determination protein fox-1 - Caenorhabditis elegans| Length = 415 Score = 50.4 bits (119), Expect = 1e-05 Identities = 31/81 (38%), Positives = 48/81 (59%) Frame = +2 Query: 269 PVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEAL 448 P GPK RL NIP+ D++ +FEK G V DVE+ + + + ++G FVTM ++A Sbjct: 149 PDGPK-RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEI-IFNERGSKGFGFVTMERPQDAE 206 Query: 449 SALKNLNLSTLNDRTIKVDFA 511 A + L+ S + R I+V+ A Sbjct: 207 RARQELHGSMIEGRKIEVNCA 227
>Q5YD48:ACF_MOUSE APOBEC1 complementation factor - Mus musculus (Mouse)| Length = 595 Score = 50.4 bits (119), Expect = 1e-05 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 2/161 (1%) Frame = +2 Query: 260 DEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEE 439 D P + +P D+ D++ L EK G + ++ L M + NRG AFVT +++ Sbjct: 48 DSTPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDFNGNNRGYAFVTFSNKQ 107 Query: 440 EALSALKNL-NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLR 613 EA +A+K L N R + V A V+ +F G + + R L Sbjct: 108 EAKNAIKQLNNYEIRTGRLLGV-------------CASVDNCRLFRGGIPKTKKREEILS 154 Query: 614 ELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAA 736 E+ T GV V V ++ G+ FV + S A A Sbjct: 155 EMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAAMA 195 Score = 46.6 bits (109), Expect = 2e-04 Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +2 Query: 362 VVDVEL--SMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLN--DRTIKVDFAKPKKKQ 529 VVDV + S KNRG AFV S A A + L + I VD+A+P+ + Sbjct: 163 VVDVIVYPSAADKTKNRGFAFVEYESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEV 222 Query: 530 PAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST-PGVQSVEVIFHTTTPRRSAGYGFVS 706 + V+ +++V NL + + F S PG +VE + ++ Y FV Sbjct: 223 DEDTMSSVK--ILYVRNLMLSTSEEMIEKEFNSIKPG--AVERV------KKIRDYAFVH 272 Query: 707 FSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 808 FS++E+A A+ NGK L G I V + K Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 306 Score = 35.0 bits (79), Expect = 0.59 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = +2 Query: 395 KKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAV 538 KK R AFV + E+A+ A+K LN L+ I+V AKP K V Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYV 310 Score = 34.3 bits (77), Expect = 1.0 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 10/106 (9%) Frame = +2 Query: 530 PAVPSAPVEKNV-VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVS 706 P S P E+ +F+G L + L L + + ++ R GY FV+ Sbjct: 45 PGWDSTPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDFNGNNR--GYAFVT 102 Query: 707 FSSKEEAEAAISTFNGKEL-MGRSINV--------MFKEDTPKKNK 817 FS+K+EA+ AI N E+ GR + V +F+ PK K Sbjct: 103 FSNKQEAKNAIKQLNNYEIRTGRLLGVCASVDNCRLFRGGIPKTKK 148
>P38922:HRB1_YEAST Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 454 Score = 50.1 bits (118), Expect = 2e-05 Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 11/195 (5%) Frame = +2 Query: 245 EADAEDEEPVGPK--TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAF 418 E D+ EE V + N+ +D TP+D+ F + G VV ++ + S +RG+ Sbjct: 146 ELDSTYEEKVNRNYSNSIFVGNLTYDSTPEDLTEFFSQIGKVVRADI-ITSRGHHRGMGT 204 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPK-----KKQPAVPSAPVEKN----VVF 571 V + ++ A++ + + DR I V P K++ A+ + N V Sbjct: 205 VEFTNSDDVDRAIRQYDGAFFMDRKIFVRQDNPPPSNNIKERKALDRGELRHNRKTHEVI 264 Query: 572 VGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 V NL V + L+++F V +V S G G VSF ++ AI +N Sbjct: 265 VKNLPASVNWQALKDIFKECGNVAHADV--ELDGDGVSTGSGTVSFYDIKDLHRAIEKYN 322 Query: 752 GKELMGRSINVMFKE 796 G + G ++V KE Sbjct: 323 GYSIEGNVLDVKSKE 337 Score = 34.7 bits (78), Expect = 0.77 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +2 Query: 275 GPKTRLI-AMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALS 451 G + RLI N+P+ D+ LFE G V + EL S G+A V + ++A Sbjct: 372 GERNRLIYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDSKGAPTGIAVVEYDNVDDADV 431 Query: 452 ALKNLNLSTLNDRTIKVDFAK 514 ++ LN + + +AK Sbjct: 432 CIERLNNYNYGGCDLDISYAK 452
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 49.7 bits (117), Expect = 2e-05 Identities = 27/77 (35%), Positives = 43/77 (55%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 E+ +FVG L + + L + F+S + V V+ T +RS G+GF++F++ E A Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRET-QRSRGFGFITFTNPEHASV 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NG+ L GR I V Sbjct: 63 AMRAMNGESLDGRQIRV 79 Score = 32.0 bits (71), Expect = 5.0 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = +2 Query: 392 SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFA 511 ++++RG F+T + E A A++ +N +L+ R I+VD A Sbjct: 43 TQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>Q6CQR6:MRD1_KLULA Multiple RNA-binding domain-containing protein 1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 878 Score = 49.7 bits (117), Expect = 2e-05 Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 9/195 (4%) Frame = +2 Query: 251 DAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKK------NRGL 412 D +D+ GP + N+ + T + F+ V ++ K + G Sbjct: 640 DDDDDVQAGPTVSIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGF 699 Query: 413 AFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKN---VVFVGNL 583 F ++E+A + + + + L+ +++ + + S+ +K + V NL Sbjct: 700 GFAEFKTKEQANAVISAMEGTILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNL 759 Query: 584 TWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKEL 763 + + + ELF+S ++SV V + + G+ FV F +EAE A+ G L Sbjct: 760 PFEATRKDVFELFSSFGQLKSVRV--PKKFDKSARGFAFVEFLLPKEAENAMDQLQGVHL 817 Query: 764 MGRSINVMFKEDTPK 808 +GR + + F E P+ Sbjct: 818 LGRRLVMEFVEQDPE 832 Score = 34.3 bits (77), Expect = 1.0 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 11/103 (10%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEK-----------QGTVVDVELSMHSSKKNRGLAFVTMG 430 +R+I +P + D +R L EK Q + DV+L + ++R AF+ Sbjct: 2 SRVIVKGLPIYLKEDRLRDLIEKRLTQKHQSTDVQSYLSDVKLMKNRDGESRRFAFIGFR 61 Query: 431 SEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK 559 EE+A + N + ++ I+V AK P VP EK Sbjct: 62 DEEDAFDCVNYFNGTFVDTSKIEVSMAK-SFADPRVPQPMREK 103
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 49.7 bits (117), Expect = 2e-05 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 VFVGN+ + L+++F+ V S +++ T + GYGF + +E A +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPK-GYGFCEYQDQETALSAMRN 76 Query: 746 FNGKELMGRSINV 784 NG+E GR++ V Sbjct: 77 LNGREFSGRALRV 89 Score = 48.9 bits (115), Expect = 4e-05 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP++ T + ++ +F + G+VV L + K +G F +E ALSA++NLN Sbjct: 22 NIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81 Query: 479 LNDRTIKVDFAKPKKKQPAV----PSAPV 553 + R ++VD A +K + + P+AP+ Sbjct: 82 FSGRALRVDNAASEKNKEELKSLGPAAPI 110
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 49.7 bits (117), Expect = 2e-05 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 VFVGN+ + L+++F+ V S +++ T + GYGF + +E A +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPK-GYGFCEYQDQETALSAMRN 76 Query: 746 FNGKELMGRSINV 784 NG+E GR++ V Sbjct: 77 LNGREFSGRALRV 89 Score = 48.9 bits (115), Expect = 4e-05 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP++ T + ++ +F + G+VV L + K +G F +E ALSA++NLN Sbjct: 22 NIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81 Query: 479 LNDRTIKVDFAKPKKKQPAV----PSAPV 553 + R ++VD A +K + + P+AP+ Sbjct: 82 FSGRALRVDNAASEKNKEELKSLGPAAPI 110
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 49.3 bits (116), Expect = 3e-05 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 4/155 (2%) Frame = +2 Query: 338 VLFE---KQGTVVDVELSMHSSKKNR-GLAFVTMGSEEEALSALKNLNLSTLNDRTIKVD 505 +LFE + G VV++ + + + G F E++ A + LN L + I+V+ Sbjct: 26 ILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVN 85 Query: 506 FAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRS 685 A + + A + FVGNL V R L + F++ + + R S Sbjct: 86 RASQDRGVNTLIGANL-----FVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGR-S 139 Query: 686 AGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF 790 GYGFVS+ S E A+AAI N + LM + I V + Sbjct: 140 KGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSY 174
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 49.3 bits (116), Expect = 3e-05 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%) Frame = +2 Query: 254 AEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMG 430 +++EE G ++ + WD + D++ F K G VVD + M ++ ++RG F+ + Sbjct: 68 SKNEEDAG---KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFI-LF 123 Query: 431 SEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHL 610 + ++ + + L+ R I KK A+ PV+K +FVG L + Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVI------DPKKAMAMKKDPVKK--IFVGGLNPEATEEKI 175 Query: 611 RELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEE 724 RE F ++++E+ P+ + GFV + KEE Sbjct: 176 REYFGQFGEIEAIEL---PIDPKLNKRRGFVFITFKEE 210
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 49.3 bits (116), Expect = 3e-05 Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 7/185 (3%) Frame = +2 Query: 245 EADAEDEEPV-GPKTRLIAMNIPWDVTPDDIRVLFEKQG--TVVDVELSMHSSKKNR--- 406 + + EDE+ V GP + N+ + T + F+ V V+ +KN+ Sbjct: 626 DKEDEDEQVVDGPTVSIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLS 685 Query: 407 -GLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL 583 G FV ++E+A + + ++ + ++ I++ + + + + + V NL Sbjct: 686 MGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQGNAGSQEKKKAKNGKIIVKNL 745 Query: 584 TWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKEL 763 + + + ELF S ++SV V + + G+ FV F +EAE A+ G L Sbjct: 746 PFEATRKDVFELFNSFGQLKSVRV--PKKFDKSARGFAFVEFVLPKEAENAMDQLQGVHL 803 Query: 764 MGRSI 778 +GR + Sbjct: 804 LGRRL 808 Score = 39.3 bits (90), Expect = 0.031 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR----SAGYGFVSFSSKEEAEA 733 +F+ NL ++ S+ L + F G +V ++ S G+GFV F +KE+A A Sbjct: 642 IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQATA 701 Query: 734 AISTFNGKELMGRSINV 784 IS +G + G I + Sbjct: 702 VISAMDGTVIDGHKIQL 718
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 49.3 bits (116), Expect = 3e-05 Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 1/141 (0%) Frame = +2 Query: 311 WDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKNLNLSTLND 487 WD T D++R F K GTV D+++ ++ ++RG F++ +K ++ L+ Sbjct: 168 WDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDG 225 Query: 488 RTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHT 667 + I A P+ +Q + +FVG + VR + E F+ + +++ Sbjct: 226 KVIDPKRAIPRDEQD-------KTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278 Query: 668 TTPRRSAGYGFVSFSSKEEAE 730 T +S G+GFV++ S + + Sbjct: 279 DT-GQSRGFGFVTYDSADAVD 298 Score = 38.1 bits (87), Expect = 0.070 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 20/153 (13%) Frame = +2 Query: 347 EKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKK 526 ++ GT D E S +K + +E A SA N N S+ + + + Sbjct: 76 KQDGTANDKEGSNEDTKNEK--------KQESATSANANANASSAGPSGLPWEQLQQTMS 127 Query: 527 QPAVPSA--PVEKNV------------------VFVGNLTWRVRSRHLRELFASTPGVQS 646 Q PS+ P ++ V +F+G L W +LRE F V Sbjct: 128 QFQQPSSQSPPQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTD 187 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++++ T RS G+GF+SF + + T Sbjct: 188 LKIMKDPAT-GRSRGFGFLSFEKPSSVDEVVKT 219
>Q9R0U0:FUSIP_MOUSE FUS-interacting serine-arginine-rich protein 1 - Mus musculus| (Mouse) Length = 262 Score = 49.3 bits (116), Expect = 3e-05 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSA 454 P T L N+ D +D+R F + G +VDV + + +++ RG A+V +A A Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV 565 L NL+ + R I++ FA+ +K P A +NV Sbjct: 68 LHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>O75494:FUSIP_HUMAN FUS-interacting serine-arginine-rich protein 1 - Homo sapiens| (Human) Length = 262 Score = 49.3 bits (116), Expect = 3e-05 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSA 454 P T L N+ D +D+R F + G +VDV + + +++ RG A+V +A A Sbjct: 8 PNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA 67 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV 565 L NL+ + R I++ FA+ +K P A +NV Sbjct: 68 LHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 48.9 bits (115), Expect = 4e-05 Identities = 27/77 (35%), Positives = 43/77 (55%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 E+ +FVG L + + L + F+S + V V+ T +RS G+GF++F++ E A Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRET-QRSRGFGFITFTNPEHASD 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NG+ L GR I V Sbjct: 63 AMRAMNGESLDGRQIRV 79 Score = 32.7 bits (73), Expect = 2.9 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = +2 Query: 392 SKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFA 511 ++++RG F+T + E A A++ +N +L+ R I+VD A Sbjct: 43 TQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>Q06106:MRD1_YEAST Multiple RNA-binding domain-containing protein 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 887 Score = 48.9 bits (115), Expect = 4e-05 Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 9/196 (4%) Frame = +2 Query: 239 ETEADAEDEEPV-GPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRG-- 409 E ++A DE+ + GP + N+ + T ++ F+ V ++ K++G Sbjct: 647 EGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKT 706 Query: 410 ----LAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV--VF 571 FV ++E+A + + ++ + ++ I++ + + Q K + Sbjct: 707 LSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSNKKSGKII 766 Query: 572 VGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFN 751 V NL + + + ELF S ++SV V + + G+ FV F +EAE A+ + Sbjct: 767 VKNLPFEATRKDVFELFNSFGQLKSVRV--PKKFDKSARGFAFVEFLLPKEAENAMDQLH 824 Query: 752 GKELMGRSINVMFKED 799 G L+GR + + + E+ Sbjct: 825 GVHLLGRRLVMQYAEE 840
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 48.9 bits (115), Expect = 4e-05 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 5/182 (2%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS---SKKNRGLAFVTMGSEEEALSAL 457 RL +IP T + I F K + + H KKNRG F+ + A A Sbjct: 244 RLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQAR 303 Query: 458 KNLNLSTLN--DRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST 631 + L + V++A P + P + V+FV NL V L + F+ Sbjct: 304 RRLMSGKVKVWGNVGTVEWADPIEDPD--PEVMAKVKVLFVRNLANTVTEEILEKAFSQF 361 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 ++ V ++ Y F+ F ++ A A+ NGK+L G +I ++F + +K Sbjct: 362 GKLERV---------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQK 412 Query: 812 NK 817 K Sbjct: 413 RK 414 Score = 46.6 bits (109), Expect = 2e-04 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 4/162 (2%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALK 460 T + IP D+ D++ LFEK G + D+ L M + NRG AFVT ++E A A+K Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221 Query: 461 NLNLSTL-NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLRELFASTP 634 N + + + I V + V N +FVG++ + + + L E T Sbjct: 222 LYNNHEIRSGKHIGVCIS-------------VANNRLFVGSIPKSKTKEQILEEFSKVTE 268 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSS-KEEAEAAISTFNGK 757 G+ V + +++ G+ F+ + K A+A +GK Sbjct: 269 GLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGK 310
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 48.9 bits (115), Expect = 4e-05 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 VFVGN+ + L+++F+ V S +++ T + GYGF + +E A +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK-GYGFCEYQDQETALSAMRN 76 Query: 746 FNGKELMGRSINV 784 NG+E GR++ V Sbjct: 77 LNGREFSGRALRV 89 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP++ T + ++ +F + G VV L + K +G F +E ALSA++NLN Sbjct: 22 NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81 Query: 479 LNDRTIKVDFAKPKKKQPAVPS 544 + R ++VD A +K + + S Sbjct: 82 FSGRALRVDNAASEKNKEELKS 103
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 48.9 bits (115), Expect = 4e-05 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 VFVGN+ + L+++F+ V S +++ T + GYGF + +E A +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK-GYGFCEYQDQETALSAMRN 76 Query: 746 FNGKELMGRSINV 784 NG+E GR++ V Sbjct: 77 LNGREFSGRALRV 89 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP++ T + ++ +F + G VV L + K +G F +E ALSA++NLN Sbjct: 22 NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81 Query: 479 LNDRTIKVDFAKPKKKQPAVPS 544 + R ++VD A +K + + S Sbjct: 82 FSGRALRVDNAASEKNKEELKS 103
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 48.9 bits (115), Expect = 4e-05 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 VFVGN+ + L+++F+ V S +++ T + GYGF + +E A +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK-GYGFCEYQDQETALSAMRN 76 Query: 746 FNGKELMGRSINV 784 NG+E GR++ V Sbjct: 77 LNGREFSGRALRV 89 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP++ T + ++ +F + G VV L + K +G F +E ALSA++NLN Sbjct: 22 NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81 Query: 479 LNDRTIKVDFAKPKKKQPAVPS 544 + R ++VD A +K + + S Sbjct: 82 FSGRALRVDNAASEKNKEELKS 103
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 48.9 bits (115), Expect = 4e-05 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 VFVGN+ + L+++F+ V S +++ T + GYGF + +E A +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK-GYGFCEYQDQETALSAMRN 76 Query: 746 FNGKELMGRSINV 784 NG+E GR++ V Sbjct: 77 LNGREFSGRALRV 89 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 NIP++ T + ++ +F + G VV L + K +G F +E ALSA++NLN Sbjct: 22 NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81 Query: 479 LNDRTIKVDFAKPKKKQPAVPS 544 + R ++VD A +K + + S Sbjct: 82 FSGRALRVDNAASEKNKEELKS 103
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 48.5 bits (114), Expect = 5e-05 Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 23/144 (15%) Frame = +2 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKK------------------ 526 +RG FV E + SAL + DR I+V A PK K Sbjct: 227 SRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVG 286 Query: 527 -----QPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAG 691 QP A + VFVG L+ V L+ LF + E+++ P + G Sbjct: 287 FYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFG-----EIVYVKIPPGK--G 339 Query: 692 YGFVSFSSKEEAEAAISTFNGKEL 763 GFV F +++ AE AI+ G L Sbjct: 340 CGFVQFVNRQSAEIAINQLQGYPL 363 Score = 43.5 bits (101), Expect = 0.002 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 3/177 (1%) Frame = +2 Query: 263 EEPVGPKTRLIAMNI-PWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSE 436 +E V KT L + PW VT I+ ++ G V V+L + + N G FV S Sbjct: 86 DENVYQKTTLWMGELEPW-VTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASP 144 Query: 437 EEALSALKNLNLSTLN-DRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLR 613 EA SA+ N + K+++A + S E ++ FVG+L+ V + Sbjct: 145 HEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSI-FVGDLSPNVNEFDVY 203 Query: 614 ELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 LFAS I S GYGFV F+ + + ++A++ G+ R I V Sbjct: 204 SLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRV 260
>Q9HEQ9:TCG1_SCHPO Single-stranded TG1-3 DNA-binding protein - Schizosaccharomyces| pombe (Fission yeast) Length = 348 Score = 48.5 bits (114), Expect = 5e-05 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Frame = +2 Query: 329 DIRVLFEKQGTVVDVELSMHSSKKNR-----GLAFVTMGSEEEALSALKNLNLSTLNDRT 493 +IR LFE GTV V + ++ G+AFVT ++E+ A++ LN TL+DR Sbjct: 59 EIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKAIETLNGKTLDDRE 118 Query: 494 IKVDFAKPKKKQP 532 I V A+P ++QP Sbjct: 119 IVVQKARPVQEQP 131 Score = 41.2 bits (95), Expect = 0.008 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 26/186 (13%) Frame = +2 Query: 320 TPDDIRVLFEKQGTVVDVELSMHSSKKNR-GLAFVTMGSEEEALSALKNLNLSTLNDRTI 496 T DD ++ +K V + + KN+ G T S E A SA + + + N T Sbjct: 113 TLDDREIVVQKARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDENEANTATA 172 Query: 497 -----------KVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF-ASTPGV 640 K + K K + P+ N ++V L+ + + L+E+F A P Sbjct: 173 PSSNEANGVDKKQNEIKGKGGSGKNKAKPLPPNSIYVSGLSVTLTNEGLKEMFDAYNPTR 232 Query: 641 QSVEV----------IFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSI---N 781 + V I RR G+GFVSF++ E+ AI NGK++ ++ + Sbjct: 233 ARIAVRSLPPYIIRRIKLRGEQRRGRGFGFVSFANAEDQSRAIEEMNGKQVGDLTLVVKS 292 Query: 782 VMFKED 799 +F+ED Sbjct: 293 AVFRED 298
>Q8WXF0:SRR35_HUMAN 35 kDa SR repressor protein - Homo sapiens (Human)| Length = 261 Score = 48.5 bits (114), Expect = 5e-05 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSA 454 P T L N+ P+D+R F + G +VDV + + +++ RG A+V +A A Sbjct: 8 PNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDA 67 Query: 455 LKNLNLSTLNDRTIKVDFAKPKKKQP 532 L NLN + R I++ FA+ +K P Sbjct: 68 LYNLNRKWVCGRQIEIQFAQGDRKTP 93
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 48.5 bits (114), Expect = 5e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------TSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 48.5 bits (114), Expect = 5e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------TSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 48.5 bits (114), Expect = 5e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------TSTKLHVGNISPTCTNKELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q8IY67:RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 - Homo sapiens (Human)| Length = 606 Score = 48.5 bits (114), Expect = 5e-05 Identities = 43/168 (25%), Positives = 73/168 (43%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 + +++ +P DVT ++ L D EL K +G AFVT+ + E+A +A+ Sbjct: 58 RRKILIRGLPGDVTNQEVHDLLS------DYELKYCFVDKYKGTAFVTLLNGEQAEAAIN 111 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 + S L +R + V QP ++ V NL + + EL + Sbjct: 112 AFHQSRLRERELSVQL------QPT-------DALLCVANLPPSLTQQQFEELVRPFGSL 158 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + +++ T + S GYGF + K+ A A S GK L R++ V Sbjct: 159 ERCFLVYSERTGQ-SKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205
>Q75A83:MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 838 Score = 48.5 bits (114), Expect = 5e-05 Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 8/193 (4%) Frame = +2 Query: 242 TEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNR----- 406 +EA A D GP + N+ + T + F+ V ++ KN Sbjct: 602 SEATAID----GPTVSIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLS 657 Query: 407 -GLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK--NVVFVG 577 G F+ ++E+A + + ++ + ++ I++ + + P +K + V Sbjct: 658 MGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQSSLPKTSKGSKKKISGKIIVK 717 Query: 578 NLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 NL + + + ELF+S ++SV V + + G+ FV F EAE A+ G Sbjct: 718 NLPFEATRKDVFELFSSFGQLKSVRV--PKKFDKSARGFAFVEFLLPSEAENAMDQLQGV 775 Query: 758 ELMGRSINVMFKE 796 L+GR + + + E Sbjct: 776 HLLGRRLVMQYAE 788 Score = 38.9 bits (89), Expect = 0.041 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Frame = +2 Query: 503 DFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFH----TT 670 D P + A+ V +FV NL + S L E F G +V + Sbjct: 596 DSKTPSSEATAIDGPTVS---IFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNS 652 Query: 671 TPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMF---KEDTPKKNK 817 + S G+GF+ F +KE+A A I+ +G + G I + + PK +K Sbjct: 653 DKKLSMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQSSLPKTSK 704
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 48.5 bits (114), Expect = 5e-05 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 5/182 (2%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS---SKKNRGLAFVTMGSEEEALSAL 457 RL +IP T + I F K + + H KKNRG F+ + A A Sbjct: 154 RLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQAR 213 Query: 458 KNLNLSTLN--DRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST 631 + L + V++A P + P + V+FV NL V L + F+ Sbjct: 214 RRLMSGKVKVWGNVGTVEWADPIEDPD--PEVMAKVKVLFVRNLANTVTEEILEKSFSQF 271 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 ++ V ++ Y F+ F ++ A A+ NGK+L G +I ++F + +K Sbjct: 272 GKLERV---------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQK 322 Query: 812 NK 817 K Sbjct: 323 RK 324 Score = 46.6 bits (109), Expect = 2e-04 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 4/162 (2%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALK 460 T + IP D+ D++ LFEK G + D+ L M + NRG AFVT ++E A A+K Sbjct: 72 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 131 Query: 461 NLNLSTL-NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLRELFASTP 634 N + + + I V + V N +FVG++ + + + L E T Sbjct: 132 LYNNHEIRSGKHIGVCIS-------------VANNRLFVGSIPKSKTKEQILEEFSKVTE 178 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSS-KEEAEAAISTFNGK 757 G+ V + +++ G+ F+ + K A+A +GK Sbjct: 179 GLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGK 220
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 48.5 bits (114), Expect = 5e-05 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 5/182 (2%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS---SKKNRGLAFVTMGSEEEALSAL 457 RL +IP T + I F K + + H KKNRG F+ + A A Sbjct: 244 RLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQAR 303 Query: 458 KNLNLSTLN--DRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFAST 631 + L + V++A P + P + V+FV NL V L + F+ Sbjct: 304 RRLMSGKVKVWGNVGTVEWADPIEDPD--PEVMAKVKVLFVRNLANTVTEEILEKSFSQF 361 Query: 632 PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKK 811 ++ V ++ Y F+ F ++ A A+ NGK+L G +I ++F + +K Sbjct: 362 GKLERV---------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQK 412 Query: 812 NK 817 K Sbjct: 413 RK 414 Score = 46.6 bits (109), Expect = 2e-04 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 4/162 (2%) Frame = +2 Query: 284 TRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHS-SKKNRGLAFVTMGSEEEALSALK 460 T + IP D+ D++ LFEK G + D+ L M + NRG AFVT ++E A A+K Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221 Query: 461 NLNLSTL-NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNL-TWRVRSRHLRELFASTP 634 N + + + I V + V N +FVG++ + + + L E T Sbjct: 222 LYNNHEIRSGKHIGVCIS-------------VANNRLFVGSIPKSKTKEQILEEFSKVTE 268 Query: 635 GVQSVEVIFHTTTPRRSAGYGFVSFSS-KEEAEAAISTFNGK 757 G+ V + +++ G+ F+ + K A+A +GK Sbjct: 269 GLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGK 310
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 48.5 bits (114), Expect = 5e-05 Identities = 29/72 (40%), Positives = 38/72 (52%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W R L FA V ++I T R S G+GFV+F ++ + AI Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGR-SRGFGFVTFKDEKAMKDAIEGM 69 Query: 749 NGKELMGRSINV 784 NG++L GRSI V Sbjct: 70 NGQDLDGRSITV 81 Score = 33.5 bits (75), Expect = 1.7 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W + F + G V+D ++ + + ++RG FVT E+ A++ Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R+I V+ A+ + Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 48.1 bits (113), Expect = 7e-05 Identities = 25/90 (27%), Positives = 49/90 (54%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 K +L +P+ T +++ + + GTV D+ L + + K +GLA+V +E +A A+ Sbjct: 818 KHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVM 877 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAP 550 ++ T+ + IKV + P +++ VP P Sbjct: 878 KMDGMTIKENVIKVAISNPPQRK--VPEKP 905
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 48.1 bits (113), Expect = 7e-05 Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 K +L +P+ T +++ + + GTV D+ L + + K +GLA+V +E +A A+ Sbjct: 800 KHKLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVM 859 Query: 461 NLNLSTLNDRTIKVDFAKPKKK----QPAVPSAP 550 ++ T+ + IKV + P ++ +P V +AP Sbjct: 860 KMDGMTIRENVIKVAISNPPQRKVPEKPEVRTAP 893
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------ASTKLHVGNISPTCTNQELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------ASTKLHVGNISPTCTNQELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 48.1 bits (113), Expect = 7e-05 Identities = 42/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 ++ N+ + T ++IR LF + G + + ++ KN G FV M S+ EA A++NL Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIV-----KNFG--FVHMDSKSEADEAIQNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + LN + V+ +K K P + VGN++ ++ LR F V Sbjct: 56 HHYMLNGMAMNVEMSKGK---------PKTSTKLHVGNISSSCTNQELRAKFEEYGPVVE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AIS + G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERVEDAMEAISGLDNTAFQGKLMSV 143 Score = 41.2 bits (95), Expect = 0.008 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +FVGNL+ + +R LF+ + +++ +GFV SK EA+ AI Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDIV---------KNFGFVHMDSKSEADEAIQN 54 Query: 746 FNGKELMGRSINVMFKEDTPK 808 + L G ++NV + PK Sbjct: 55 LHHYMLNGMAMNVEMSKGKPK 75
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------ASTKLHVGNISPTCTNQELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------ASTKLHVGNISPTCTNQELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------ASTKLHVGNISPTCTNQELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/166 (25%), Positives = 73/166 (43%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNL 466 +L N+P + T +IR LFE+ G V++ ++ KN G FV + + A A++NL Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII-----KNYG--FVHIEDKTAAEDAIRNL 55 Query: 467 NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQS 646 + L+ I V+ +K K K + VGN++ ++ LR F V Sbjct: 56 HHYKLHGVNINVEASKNKSK---------ASTKLHVGNISPTCTNQELRAKFEEYGPVIE 106 Query: 647 VEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 +++ Y FV E+A AI + E G+ ++V Sbjct: 107 CDIV---------KDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143 Score = 35.4 bits (80), Expect = 0.45 Identities = 27/85 (31%), Positives = 36/85 (42%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+GNL + +R LF V ++I YGFV K AE AI Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII---------KNYGFVHIEDKTAAEDAIRN 54 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 + +L G +INV KNKS Sbjct: 55 LHHYKLHGVNINV-----EASKNKS 74
>Q5XI28:RAVR1_RAT Ribonucleoprotein PTB-binding 1 - Rattus norvegicus (Rat)| Length = 748 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/168 (25%), Positives = 71/168 (42%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 + +++ +P DVT ++ L D EL K +G AFVT+ + E+A +A+ Sbjct: 58 RRKILIRGLPGDVTNQEVHDLLS------DYELKYCFVDKYKGTAFVTLLNGEQAEAAIN 111 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 + S L +R + V QP ++ V NL + EL + Sbjct: 112 TFHQSRLRERELSVQL------QPT-------DALLCVANLPPSLTQAQFEELVRPFGSL 158 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + +++ T S GYGF + K+ A A S GK L R++ V Sbjct: 159 ERCFLVYSERTGH-SKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205
>Q9CW46:RAVR1_MOUSE Ribonucleoprotein PTB-binding 1 - Mus musculus (Mouse)| Length = 748 Score = 48.1 bits (113), Expect = 7e-05 Identities = 43/168 (25%), Positives = 71/168 (42%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 + +++ +P DVT ++ L D EL K +G AFVT+ + E+A +A+ Sbjct: 58 RRKILIRGLPGDVTNQEVHDLLS------DYELKYCFVDKYKGTAFVTLLNGEQAEAAIN 111 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 + S L +R + V QP ++ V NL + EL + Sbjct: 112 TFHQSRLRERELSVQL------QPT-------DALLCVANLPPSLTQAQFEELVRPFGSL 158 Query: 641 QSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 + +++ T S GYGF + K+ A A S GK L R++ V Sbjct: 159 ERCFLVYSERTGH-SKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205
>P39684:PES4_YEAST Protein PES4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 611 Score = 48.1 bits (113), Expect = 7e-05 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+G+L V L+ +F P S +V + T ++S G+G+++F KEEAE A+ Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVT-KKSLGHGYLNFEDKEEAEKAMEE 151 Query: 746 FNGKELMGRSINVM--FKEDTPKKN 814 N ++ G+ I +M + T +KN Sbjct: 152 LNYTKVNGKEIRIMPSLRNTTFRKN 176 Score = 37.0 bits (84), Expect = 0.16 Identities = 37/159 (23%), Positives = 71/159 (44%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALKNLNLSTL 481 N+P T DDI F + G + + LS +++K AFVT + ++ A+K N Sbjct: 309 NLPTITTRDDILNFFSEVGPIKSIYLS-NATKVKYLWAFVTYKNSSDSEKAIKRYNNFYF 367 Query: 482 NDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIF 661 + + V A+ K+++ + + + +F+ NL+ V ++ + ++ ++ Sbjct: 368 RGKKLLVTRAQDKEERAKFIESQ-KISTLFLENLS-AVCNKEFLKYLCHQENIRPFKIQI 425 Query: 662 HTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSI 778 S GF+ F + E+A I F L+G SI Sbjct: 426 DGYDENSSTYSGFIKFRNFEDA-TRIFNFLNNRLVGGSI 463
>Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein 1 - Cryptococcus| neoformans (Filobasidiella neoformans) Length = 769 Score = 48.1 bits (113), Expect = 7e-05 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 31/203 (15%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDI-----------RVLFEKQGT--VVDVELSMHSSKKNRGLAFV 421 +T ++ NIP+ + + RVL GT VV+ E M + + + LA+ Sbjct: 416 QTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALAYR 475 Query: 422 TMGS-------------EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEK- 559 +G+ + E + ++ + K A+ + P P E Sbjct: 476 RLGNAVLYLEKGPVGMFKSETAPGVGPISTEQKREEEAKA-LAEKVESLPEQPDPTDEAG 534 Query: 560 NVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRR----SAGYGFVSFSSKEEA 727 + +F+ L + + HL+ + + PG V R S GYGFV F +KE A Sbjct: 535 STLFLKGLNFTTTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEKLSMGYGFVGFKTKEAA 594 Query: 728 EAAISTFNGKELMGRSINVMFKE 796 A+ G E+ G+S+ V F + Sbjct: 595 TKALKALEGFEIDGKSLEVKFAQ 617 Score = 38.1 bits (87), Expect = 0.070 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Frame = +2 Query: 239 ETEADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL------SMHSSKK 400 ET+ + E T+++ N+P++ T D+R LF G + + L + ++ Sbjct: 625 ETKKGGDAEGGKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQS 684 Query: 401 NRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFA 511 RG AF+ + EA A++ L + L R + + +A Sbjct: 685 TRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWA 721
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 48.1 bits (113), Expect = 7e-05 Identities = 26/72 (36%), Positives = 37/72 (51%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W L + F+ + ++I T R S G+GFV+F ++ AI Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGR-SRGFGFVTFKDEKSMRDAIEGM 67 Query: 749 NGKELMGRSINV 784 NG+EL GR+I V Sbjct: 68 NGQELDGRNITV 79 Score = 33.5 bits (75), Expect = 1.7 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W + + F + G + D ++ + + ++RG FVT E+ A++ Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R I V+ A+ + Sbjct: 67 MNGQELDGRNITVNEAQSR 85
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 48.1 bits (113), Expect = 7e-05 Identities = 28/72 (38%), Positives = 37/72 (51%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W L F+ V ++I T R S G+GFV+F ++ + AI Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGR-SRGFGFVTFKDEKSMKDAIDEM 67 Query: 749 NGKELMGRSINV 784 NGKEL GR+I V Sbjct: 68 NGKELDGRTITV 79 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W ++ F + G V+D ++ + + ++RG FVT E+ A+ Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ RTI V+ A+ + Sbjct: 67 MNGKELDGRTITVNEAQSR 85
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 48.1 bits (113), Expect = 7e-05 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 ++ +FVG L++ + L ++F+ + V V+ T +RS G+GFV+F + ++A+ Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRET-QRSRGFGFVTFENIDDAKD 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NGK + GR I V Sbjct: 63 AMMAMNGKSVDGRQIRV 79 Score = 35.4 bits (80), Expect = 0.45 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L + +D + +F K G + +V + ++++RG FVT + ++A A+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 464 LNLSTLNDRTIKVDFA 511 +N +++ R I+VD A Sbjct: 67 MNGKSVDGRQIRVDQA 82
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 48.1 bits (113), Expect = 7e-05 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 ++ +FVG L++ + L ++F+ + V V+ T +RS G+GFV+F + ++A+ Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRET-QRSRGFGFVTFENIDDAKD 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NGK + GR I V Sbjct: 63 AMMAMNGKSVDGRQIRV 79 Score = 35.4 bits (80), Expect = 0.45 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L + +D + +F K G + +V + ++++RG FVT + ++A A+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 464 LNLSTLNDRTIKVDFA 511 +N +++ R I+VD A Sbjct: 67 MNGKSVDGRQIRVDQA 82
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/90 (27%), Positives = 49/90 (54%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSALK 460 K +L +P+ T +++ + + GTV D+ L + + K +GLA+V +E +A A+ Sbjct: 800 KHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVM 859 Query: 461 NLNLSTLNDRTIKVDFAKPKKKQPAVPSAP 550 ++ T+ + IKV + P +++ VP P Sbjct: 860 KMDGMTIKENIIKVAISNPPQRK--VPEKP 887
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 47.8 bits (112), Expect = 9e-05 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 N+ ++VT +DI +F + G+V V L + + RG AFV MGS+ E +A++ L+ + Sbjct: 7 NLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGLDGAE 66 Query: 479 LNDRTIKVDFAKPKK 523 R +KV+ AKPK+ Sbjct: 67 WMGRDLKVNKAKPKE 81 Score = 42.0 bits (97), Expect = 0.005 Identities = 27/84 (32%), Positives = 42/84 (50%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VGNL++ V + +FA V+ V + T R G+ FV S E AAI Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLR-GFAFVEMGSDAEETAAIEG 61 Query: 746 FNGKELMGRSINVMFKEDTPKKNK 817 +G E MGR + V + PK+++ Sbjct: 62 LDGAEWMGRDLKV--NKAKPKEDR 83
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 47.8 bits (112), Expect = 9e-05 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 N+ ++VT D + +F + GTV V+L + + RG FV MGSE E +A++ L+ + Sbjct: 7 NLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEALDGAE 66 Query: 479 LNDRTIKVDFAKPKK 523 R +KV+ AKP++ Sbjct: 67 WMGRDLKVNKAKPRE 81 Score = 44.3 bits (103), Expect = 0.001 Identities = 26/73 (35%), Positives = 39/73 (53%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VGNL++ V L +FA V+ V++ T + G+GFV S+ E AAI Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQ-PRGFGFVEMGSEAEEAAAIEA 61 Query: 746 FNGKELMGRSINV 784 +G E MGR + V Sbjct: 62 LDGAEWMGRDLKV 74
>P57052:RBM11_HUMAN Putative RNA-binding protein 11 - Homo sapiens (Human)| Length = 281 Score = 47.8 bits (112), Expect = 9e-05 Identities = 31/85 (36%), Positives = 39/85 (45%) Frame = +2 Query: 539 PSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSK 718 P+ VFVGNL RVR L ELF + V + +S +GFV F Sbjct: 3 PAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKS--FGFVCFKHP 60 Query: 719 EEAEAAISTFNGKELMGRSINVMFK 793 E AI+ NG L GR INV ++ Sbjct: 61 ESVSYAIALLNGIRLYGRPINVQYR 85
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 47.8 bits (112), Expect = 9e-05 Identities = 28/72 (38%), Positives = 38/72 (52%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W R L F+ V ++I T R S G+GFV+F ++ + AI Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGR-SRGFGFVTFKDEKSMKDAIEGM 69 Query: 749 NGKELMGRSINV 784 NG++L GRSI V Sbjct: 70 NGQDLDGRSITV 81 Score = 33.5 bits (75), Expect = 1.7 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W + F + G V+D ++ + + ++RG FVT E+ A++ Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R+I V+ A+ + Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 ++ +FVG L++ + L ++F+ + V V+ T +RS G+GFV+F + ++A+ Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRET-QRSRGFGFVTFENIDDAKD 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NGK + GR I V Sbjct: 63 AMMAMNGKSVDGRQIRV 79 Score = 34.7 bits (78), Expect = 0.77 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L + +D + +F K G + +V + ++++RG FVT + ++A A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 464 LNLSTLNDRTIKVDFA 511 +N +++ R I+VD A Sbjct: 67 MNGKSVDGRQIRVDQA 82
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 ++ +FVG L++ + L ++F+ + V V+ T +RS G+GFV+F + ++A+ Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRET-QRSRGFGFVTFENIDDAKD 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NGK + GR I V Sbjct: 63 AMMAMNGKSVDGRQIRV 79 Score = 34.7 bits (78), Expect = 0.77 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L + +D + +F K G + +V + ++++RG FVT + ++A A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 464 LNLSTLNDRTIKVDFA 511 +N +++ R I+VD A Sbjct: 67 MNGKSVDGRQIRVDQA 82
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 47.8 bits (112), Expect = 9e-05 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 ++ +FVG L++ + L ++F+ + V V+ T +RS G+GFV+F + ++A+ Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRET-QRSRGFGFVTFENIDDAKD 62 Query: 734 AISTFNGKELMGRSINV 784 A+ NGK + GR I V Sbjct: 63 AMMAMNGKSVDGRQIRV 79 Score = 34.7 bits (78), Expect = 0.77 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L + +D + +F K G + +V + ++++RG FVT + ++A A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 464 LNLSTLNDRTIKVDFA 511 +N +++ R I+VD A Sbjct: 67 MNGKSVDGRQIRVDQA 82
>Q24491:RX21_DROME RNA-binding protein Rsf1 - Drosophila melanogaster (Fruit fly)| Length = 197 Score = 47.4 bits (111), Expect = 1e-04 Identities = 26/84 (30%), Positives = 42/84 (50%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 V+VGNLT +V+ L F + SV + F+ G+ FV F +++AE A Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP------GFAFVEFEHRDDAEKACDI 62 Query: 746 FNGKELMGRSINVMFKEDTPKKNK 817 NG EL+G + V + P++ + Sbjct: 63 LNGSELLGSQLRVEISKGRPRQGR 86
>Q5XG24:RNPS1_XENLA RNA-binding protein with serine-rich domain 1 - Xenopus laevis| (African clawed frog) Length = 283 Score = 47.4 bits (111), Expect = 1e-04 Identities = 32/130 (24%), Positives = 57/130 (43%) Frame = +2 Query: 389 SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV 568 SS + + GS + N S + K D + K++ P+ V Sbjct: 86 SSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVH---- 141 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +G LT V H+ E+F++ ++ +++ P S GY +V F + EEAE A+ Sbjct: 142 -IGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHM 200 Query: 749 NGKELMGRSI 778 +G ++ G+ I Sbjct: 201 DGGQIDGQEI 210 Score = 31.2 bits (69), Expect = 8.5 Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = +2 Query: 245 EADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTV--VDVELSMHSSKKNRGLAF 418 E + + P T++ + +VT D I +F G + +D+ + + ++G A+ Sbjct: 125 EKERKRRSPSPRPTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAY 184 Query: 419 VTMGSEEEALSALKNLNLSTLNDRTI 496 V + EEA ALK+++ ++ + I Sbjct: 185 VEFEAPEEAEKALKHMDGGQIDGQEI 210
>Q6AYK1:RNPS1_RAT RNA-binding protein with serine-rich domain 1 - Rattus norvegicus| (Rat) Length = 305 Score = 47.4 bits (111), Expect = 1e-04 Identities = 31/130 (23%), Positives = 57/130 (43%) Frame = +2 Query: 389 SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV 568 SS + + GS + N S + K D + K++ P+ V Sbjct: 109 SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVH---- 164 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +G LT V H+ E+F++ ++ +++ P S GY +V F + +EAE A+ Sbjct: 165 -IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHM 223 Query: 749 NGKELMGRSI 778 +G ++ G+ I Sbjct: 224 DGGQIDGQEI 233
>Q5NVM8:RNPS1_PONPY RNA-binding protein with serine-rich domain 1 - Pongo pygmaeus| (Orangutan) Length = 305 Score = 47.4 bits (111), Expect = 1e-04 Identities = 31/130 (23%), Positives = 57/130 (43%) Frame = +2 Query: 389 SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV 568 SS + + GS + N S + K D + K++ P+ V Sbjct: 109 SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVH---- 164 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +G LT V H+ E+F++ ++ +++ P S GY +V F + +EAE A+ Sbjct: 165 -IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHM 223 Query: 749 NGKELMGRSI 778 +G ++ G+ I Sbjct: 224 DGGQIDGQEI 233
>Q99M28:RNPS1_MOUSE RNA-binding protein with serine-rich domain 1 - Mus musculus| (Mouse) Length = 305 Score = 47.4 bits (111), Expect = 1e-04 Identities = 31/130 (23%), Positives = 57/130 (43%) Frame = +2 Query: 389 SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV 568 SS + + GS + N S + K D + K++ P+ V Sbjct: 109 SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVH---- 164 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +G LT V H+ E+F++ ++ +++ P S GY +V F + +EAE A+ Sbjct: 165 -IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHM 223 Query: 749 NGKELMGRSI 778 +G ++ G+ I Sbjct: 224 DGGQIDGQEI 233
>Q4R5N1:RNPS1_MACFA RNA-binding protein with serine-rich domain 1 - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 305 Score = 47.4 bits (111), Expect = 1e-04 Identities = 31/130 (23%), Positives = 57/130 (43%) Frame = +2 Query: 389 SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV 568 SS + + GS + N S + K D + K++ P+ V Sbjct: 109 SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVH---- 164 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +G LT V H+ E+F++ ++ +++ P S GY +V F + +EAE A+ Sbjct: 165 -IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHM 223 Query: 749 NGKELMGRSI 778 +G ++ G+ I Sbjct: 224 DGGQIDGQEI 233
>Q15287:RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 - Homo sapiens| (Human) Length = 305 Score = 47.4 bits (111), Expect = 1e-04 Identities = 31/130 (23%), Positives = 57/130 (43%) Frame = +2 Query: 389 SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVV 568 SS + + GS + N S + K D + K++ P+ V Sbjct: 109 SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVH---- 164 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 +G LT V H+ E+F++ ++ +++ P S GY +V F + +EAE A+ Sbjct: 165 -IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHM 223 Query: 749 NGKELMGRSI 778 +G ++ G+ I Sbjct: 224 DGGQIDGQEI 233
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 47.4 bits (111), Expect = 1e-04 Identities = 29/85 (34%), Positives = 45/85 (52%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VGNL++ V L +FA V+ V++ T R G+GFV + E AAI Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMR-GFGFVELEADAEETAAIEA 61 Query: 746 FNGKELMGRSINVMFKEDTPKKNKS 820 +G E MGR + V + P++N+S Sbjct: 62 LDGAEWMGRDLKV--NKAKPRENRS 84
>Q8VIJ6:SFPQ_MOUSE Splicing factor, proline- and glutamine-rich - Mus musculus (Mouse)| Length = 699 Score = 47.0 bits (110), Expect = 2e-04 Identities = 43/158 (27%), Positives = 67/158 (42%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E+ + RL N+P D+T D+ + LF K G +V ++ K +G F+ + S Sbjct: 282 EKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFIN-----KGKGFGFIKLESRAL 336 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A A L+ + + R ++V FA + V NL+ V + L E F Sbjct: 337 AEIAKAELDDTPMRGRQLRVRFA-------------THAAALSVRNLSPYVSNELLEEAF 383 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAA 736 + ++ VI RS G G V F+SK A A Sbjct: 384 SQFGPIERAVVI--VDDRGRSTGKGIVEFASKPAARKA 419
>P23246:SFPQ_HUMAN Splicing factor, proline- and glutamine-rich - Homo sapiens (Human)| Length = 707 Score = 47.0 bits (110), Expect = 2e-04 Identities = 43/158 (27%), Positives = 67/158 (42%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E+ + RL N+P D+T D+ + LF K G +V ++ K +G F+ + S Sbjct: 290 EKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFIN-----KGKGFGFIKLESRAL 344 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A A L+ + + R ++V FA + V NL+ V + L E F Sbjct: 345 AEIAKAELDDTPMRGRQLRVRFA-------------THAAALSVRNLSPYVSNELLEEAF 391 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAA 736 + ++ VI RS G G V F+SK A A Sbjct: 392 SQFGPIERAVVI--VDDRGRSTGKGIVEFASKPAARKA 427
>Q6PBM8:RBM18_DANRE Probable RNA-binding protein 18 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 188 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSA--GYGFVSFSSKEEAEAAI 739 +++GN+ ++ HL +L V+ + +FH + P GY FV+F +KEEAE AI Sbjct: 25 LWIGNIDPKITEYHLVKLLEKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFHTKEEAERAI 84 Query: 740 STFNGKELMGRSINV 784 NGK + + + V Sbjct: 85 QCLNGKLALSKKLVV 99
>Q62504:MINT_MOUSE Msx2-interacting protein - Mus musculus (Mouse)| Length = 3644 Score = 47.0 bits (110), Expect = 2e-04 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 3/181 (1%) Frame = +2 Query: 257 EDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGL---AFVTM 427 ++ P +T I N+ T D+R +F++ G +VD+++ KK G+ AF+ Sbjct: 431 DEFHPKATRTLFIG-NLEKTTTYHDLRNIFQRFGEIVDIDI-----KKVNGVPQYAFLQY 484 Query: 428 GSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRH 607 A+K ++ L + +K+ F K ++P+ N V++ L+ V ++ Sbjct: 485 CDIASVCKAIKKMDGEYLGNNRLKLGFGK------SMPT-----NCVWLDGLSSNVSDQY 533 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVM 787 L F V V+V+F R G V +S E+A+AA+ G+++ G I V Sbjct: 534 LTRHFCRYGPV--VKVVFD-----RLKGMALVLYSEIEDAQAAVKETKGRKIGGNKIKVD 586 Query: 788 F 790 F Sbjct: 587 F 587
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 47.0 bits (110), Expect = 2e-04 Identities = 27/72 (37%), Positives = 36/72 (50%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W L+ F+ V ++I + RS G+GFV+F ++ AI Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKII-NDRESGRSRGFGFVTFKDEKAMRDAIEEM 67 Query: 749 NGKELMGRSINV 784 NGKEL GR I V Sbjct: 68 NGKELDGRVITV 79 Score = 38.1 bits (87), Expect = 0.070 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W +D++ F + G V+D ++ + S ++RG FVT E+ A++ Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R I V+ A+ + Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 47.0 bits (110), Expect = 2e-04 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +2 Query: 569 FVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTF 748 FVG L W R L F+ + ++I T R S G+GFV+F ++ + AI Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGR-SRGFGFVTFKDEKSMKDAIEGM 69 Query: 749 NGKELMGRSINV 784 NG++L GRSI V Sbjct: 70 NGQDLDGRSITV 81 Score = 33.5 bits (75), Expect = 1.7 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVEL-SMHSSKKNRGLAFVTMGSEEEALSALKN 463 R + W + F + G +VD ++ + + ++RG FVT E+ A++ Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 464 LNLSTLNDRTIKVDFAKPK 520 +N L+ R+I V+ A+ + Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila| melanogaster (Fruit fly) Length = 365 Score = 46.6 bits (109), Expect = 2e-04 Identities = 38/177 (21%), Positives = 81/177 (45%), Gaps = 1/177 (0%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKN 463 +L + + T ++++ FEK G +VDV + +K++RG F+T S + + Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY-SHSSMIDEAQK 90 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQ 643 ++ R ++ A P++ + P+A +FVG L + +R+ F + Sbjct: 91 SRPHKIDGRVVEPKRAVPRQDIDS-PNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIV 149 Query: 644 SVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPKKN 814 + ++ T ++ G+ FV F + + + +L G+ ++V K+ PK+N Sbjct: 150 DINIVIDKETGKK-RGFAFVEFDDYDPVDKVVLQ-KQHQLNGKMVDV--KKALPKQN 202
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 46.6 bits (109), Expect = 2e-04 Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 2/163 (1%) Frame = +2 Query: 332 IRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDF 508 +R FE GT+ D + ++ +K++R FVT + EEA +A+ + ++ T+++ Sbjct: 23 LRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMA-ASPHAVDGNTVELKR 81 Query: 509 AKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSA 688 A ++ A P A + +FVG L V L E F+ V+ E+I + ++ Sbjct: 82 AV-SREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKK-R 139 Query: 689 GYGFVSFSSKEEAE-AAISTFNGKELMGRSINVMFKEDTPKKN 814 G+GFV F + + A+ AA+ F+ + G + V K+ PK++ Sbjct: 140 GFGFVYFQNHDAADKAAVVKFH--PIQGHRVEV--KKAVPKED 178 Score = 32.3 bits (72), Expect = 3.8 Identities = 19/59 (32%), Positives = 34/59 (57%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIS 742 +F+G L + LR F + + V+ + T +RS +GFV++S+ EEA+AA++ Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQT-KRSRCFGFVTYSNVEEADAAMA 66
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 46.6 bits (109), Expect = 2e-04 Identities = 27/73 (36%), Positives = 38/73 (52%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 ++VGNL++ V L +FA V+ V++ T R G+GFV S E AAI Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGR-VRGFGFVEMGSDAEETAAIEA 61 Query: 746 FNGKELMGRSINV 784 +G E MGR + V Sbjct: 62 LDGAEWMGRDLKV 74 Score = 46.6 bits (109), Expect = 2e-04 Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Frame = +2 Query: 302 NIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLST 478 N+ +DVT + + +F + G+V V+L + + + RG FV MGS+ E +A++ L+ + Sbjct: 7 NLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEALDGAE 66 Query: 479 LNDRTIKVDFAKPKK 523 R +KV+ AKP++ Sbjct: 67 WMGRDLKVNKAKPRE 81
>Q8N6W0:CELF5_HUMAN CUG-BP- and ETR-3-like factor 5 - Homo sapiens (Human)| Length = 485 Score = 46.6 bits (109), Expect = 2e-04 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 8/183 (4%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVE-LSMHSSKKNRGLAFVTMGSEEEALSALKN 463 +L IP + D++ LFE+ G + ++ L + ++G AF+T + + A+ A Sbjct: 46 KLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQ-- 103 Query: 464 LNLSTLNDRTIKVDFAKPKKKQPA-VPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGV 640 + L+++ A+P + +PA S +FVG L + + LF Sbjct: 104 ---TALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLF------ 154 Query: 641 QSVEVIFHTTTPR----RSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINVMFK-EDT 802 Q VI T R S G FV FSS EA+AAI +G + M G S +++ K DT Sbjct: 155 QPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADT 214 Query: 803 PKK 811 K+ Sbjct: 215 DKE 217 Score = 33.9 bits (76), Expect = 1.3 Identities = 21/76 (27%), Positives = 36/76 (47%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAIST 745 +F+ +L L ++F + S +V T +S +GFVSF + A+AAI Sbjct: 402 LFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRAT-NQSKCFGFVSFDNPASAQAAIQA 460 Query: 746 FNGKELMGRSINVMFK 793 NG ++ + + V K Sbjct: 461 MNGFQIGMKRLKVQLK 476
>Q4QQT3:CELF1_RAT CUG-BP- and ETR-3-like factor 1 - Rattus norvegicus (Rat)| Length = 487 Score = 46.6 bits (109), Expect = 2e-04 Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 6/191 (3%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK---KNRGLAFVTMGS 433 ++P ++ +P + D+R LFE+ G V ++ + S+ +++G FVT + Sbjct: 9 DQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYT 68 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPA--VPSAPVEKNVVFVGNLTWRVRSRH 607 + AL A + L++ + P + +PA + VE +F+G ++ + Sbjct: 69 RKAALEA-----QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTEND 123 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINV 784 +R +F+S ++ ++ S G FV+F+++ A+ AI + + M G S + Sbjct: 124 IRVMFSSFGQIEECRIL--RGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPM 181 Query: 785 MFKEDTPKKNK 817 + K +K+K Sbjct: 182 VVKFADTQKDK 192 Score = 34.7 bits (78), Expect = 0.77 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 AD+E V + I M I T +DIRV+F G + + + +RG AFVT Sbjct: 97 ADSEKNNAVEDRKLFIGM-ISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155 Query: 428 GSEEEALSALKNLN 469 + A +A+K ++ Sbjct: 156 TTRTMAQTAIKAMH 169 Score = 33.5 bits (75), Expect = 1.7 Identities = 32/117 (27%), Positives = 51/117 (43%) Frame = +2 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 AL L N NL T + A +K+ P E +F+ +L + L ++F Sbjct: 374 ALPTLYNQNLLTQQS----IGAAGSQKEGP-------EGANLFIYHLPQEFGDQDLLQMF 422 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFK 793 V S +V T S +GFVS+ + A+AAI + NG ++ + + V K Sbjct: 423 MPFGNVVSAKVFIDKQT-NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 478
>P28659:CELF1_MOUSE CUG-BP- and ETR-3-like factor 1 - Mus musculus (Mouse)| Length = 486 Score = 46.6 bits (109), Expect = 2e-04 Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 6/191 (3%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK---KNRGLAFVTMGS 433 ++P ++ +P + D+R LFE+ G V ++ + S+ +++G FVT + Sbjct: 9 DQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYT 68 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPA--VPSAPVEKNVVFVGNLTWRVRSRH 607 + AL A + L++ + P + +PA + VE +F+G ++ + Sbjct: 69 RKAALEA-----QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTEND 123 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINV 784 +R +F+S ++ ++ S G FV+F+++ A+ AI + + M G S + Sbjct: 124 IRVMFSSFGQIEECRIL--RGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPM 181 Query: 785 MFKEDTPKKNK 817 + K +K+K Sbjct: 182 VVKFADTQKDK 192 Score = 34.7 bits (78), Expect = 0.77 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 AD+E V + I M I T +DIRV+F G + + + +RG AFVT Sbjct: 97 ADSEKNNAVEDRKLFIGM-ISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155 Query: 428 GSEEEALSALKNLN 469 + A +A+K ++ Sbjct: 156 TTRTMAQTAIKAMH 169 Score = 33.5 bits (75), Expect = 1.7 Identities = 32/117 (27%), Positives = 51/117 (43%) Frame = +2 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 AL L N NL T + A +K+ P E +F+ +L + L ++F Sbjct: 373 ALPTLYNQNLLTQQS----IGAAGSQKEGP-------EGANLFIYHLPQEFGDQDLLQMF 421 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFK 793 V S +V T S +GFVS+ + A+AAI + NG ++ + + V K Sbjct: 422 MPFGNVVSAKVFIDKQT-NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 477
>Q92879:CELF1_HUMAN CUG-BP- and ETR-3-like factor 1 - Homo sapiens (Human)| Length = 486 Score = 46.2 bits (108), Expect = 3e-04 Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 6/191 (3%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK---KNRGLAFVTMGS 433 ++P ++ +P + D+R LFE+ G V ++ + S+ +++G FVT + Sbjct: 9 DQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYT 68 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPA--VPSAPVEKNVVFVGNLTWRVRSRH 607 + AL A + L++ + P + +PA + VE +F+G ++ + Sbjct: 69 RKAALEA-----QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTEND 123 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINV 784 +R +F+S ++ ++ S G FV+F+++ A+ AI + + M G S + Sbjct: 124 IRVMFSSFGQIEECRIL--RGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPM 181 Query: 785 MFKEDTPKKNK 817 + K +K+K Sbjct: 182 VVKFADTQKDK 192 Score = 34.7 bits (78), Expect = 0.77 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 AD+E V + I M I T +DIRV+F G + + + +RG AFVT Sbjct: 97 ADSEKNNAVEDRKLFIGM-ISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155 Query: 428 GSEEEALSALKNLN 469 + A +A+K ++ Sbjct: 156 TTRAMAQTAIKAMH 169 Score = 33.5 bits (75), Expect = 1.7 Identities = 32/117 (27%), Positives = 51/117 (43%) Frame = +2 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 AL L N NL T + A +K+ P E +F+ +L + L ++F Sbjct: 373 ALPTLYNQNLLTQQS----IGAAGSQKEGP-------EGANLFIYHLPQEFGDQDLLQMF 421 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFK 793 V S +V T S +GFVS+ + A+AAI + NG ++ + + V K Sbjct: 422 MPFGNVVSAKVFIDKQT-NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 477
>Q9QZH3:PPIE_MOUSE Peptidyl-prolyl cis-trans isomerase E - Mus musculus (Mouse)| Length = 301 Score = 45.8 bits (107), Expect = 3e-04 Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Frame = +2 Query: 356 GTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKK 523 G + D+++ + + ++K+RG AFV E+A +A+ N+N S L RTI+V+ AKP + Sbjct: 30 GDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMR 86 Score = 42.7 bits (99), Expect = 0.003 Identities = 25/76 (32%), Positives = 36/76 (47%) Frame = +2 Query: 557 KNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAA 736 K V++VG L V + L F + +++ T + G+ FV F E+A AA Sbjct: 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHR-GFAFVEFELAEDAAAA 63 Query: 737 ISTFNGKELMGRSINV 784 I N EL GR+I V Sbjct: 64 IDNMNESELFGRTIRV 79
>Q9UNP9:PPIE_HUMAN Peptidyl-prolyl cis-trans isomerase E - Homo sapiens (Human)| Length = 301 Score = 45.8 bits (107), Expect = 3e-04 Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Frame = +2 Query: 356 GTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKK 523 G + D+++ + + ++K+RG AFV E+A +A+ N+N S L RTI+V+ AKP + Sbjct: 30 GDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMR 86 Score = 42.7 bits (99), Expect = 0.003 Identities = 25/76 (32%), Positives = 36/76 (47%) Frame = +2 Query: 557 KNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAA 736 K V++VG L V + L F + +++ T + G+ FV F E+A AA Sbjct: 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHR-GFAFVEFELAEDAAAA 63 Query: 737 ISTFNGKELMGRSINV 784 I N EL GR+I V Sbjct: 64 IDNMNESELFGRTIRV 79
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 45.8 bits (107), Expect = 3e-04 Identities = 43/159 (27%), Positives = 68/159 (42%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E+ ++RL N+P D+T +++R LFEK G +V + K++G F+ + + Sbjct: 72 EKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-----HKDKGFGFIRLETRTL 126 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A A L+ L + ++V FA + V NL V + L E F Sbjct: 127 AEIAKVELDNMPLRGKQLRVRFA-------------CHSASLTVRNLPQYVSNELLEEAF 173 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 + V+ VI R +G G V FS K A A+ Sbjct: 174 SVFGQVERAVVI--VDDRGRPSGKGIVEFSGKPAARKAL 210
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 45.8 bits (107), Expect = 3e-04 Identities = 43/159 (27%), Positives = 68/159 (42%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E+ ++RL N+P D+T +++R LFEK G +V + K++G F+ + + Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-----HKDKGFGFIRLETRTL 121 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A A L+ L + ++V FA + V NL V + L E F Sbjct: 122 AEIAKVELDNMPLRGKQLRVRFA-------------CHSASLTVRNLPQYVSNELLEEAF 168 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 + V+ VI R +G G V FS K A A+ Sbjct: 169 SVFGQVERAVVI--VDDRGRPSGKGIVEFSGKPAARKAL 205
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 45.8 bits (107), Expect = 3e-04 Identities = 43/159 (27%), Positives = 68/159 (42%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E+ ++RL N+P D+T +++R LFEK G +V + K++G F+ + + Sbjct: 69 EKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-----HKDKGFGFIRLETRTL 123 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A A L+ L + ++V FA + V NL V + L E F Sbjct: 124 AEIAKVELDNMPLRGKQLRVRFA-------------CHSASLTVRNLPQYVSNELLEEAF 170 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 + V+ VI R +G G V FS K A A+ Sbjct: 171 SVFGQVERAVVI--VDDRGRPSGKGIVEFSGKPAARKAL 207
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 45.8 bits (107), Expect = 3e-04 Identities = 43/159 (27%), Positives = 68/159 (42%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEE 442 E+ ++RL N+P D+T +++R LFEK G +V + K++G F+ + + Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-----HKDKGFGFIRLETRTL 121 Query: 443 ALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELF 622 A A L+ L + ++V FA + V NL V + L E F Sbjct: 122 AEIAKVELDNMPLRGKQLRVRFA-------------CHSASLTVRNLPQYVSNELLEEAF 168 Query: 623 ASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAI 739 + V+ VI R +G G V FS K A A+ Sbjct: 169 SVFGQVERAVVI--VDDRGRPSGKGIVEFSGKPAARKAL 205
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 45.8 bits (107), Expect = 3e-04 Identities = 24/77 (31%), Positives = 41/77 (53%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEA 733 ++ +F+G L + L + F + V V+ T +RS G+GFV+F + ++A+ Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRET-KRSRGFGFVTFENVDDAKD 61 Query: 734 AISTFNGKELMGRSINV 784 A+ NGK + GR I V Sbjct: 62 AMMAMNGKSVDGRQIRV 78 Score = 35.0 bits (79), Expect = 0.59 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 287 RLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKN 463 +L + ++ D + F K G + +V + +K++RG FVT + ++A A+ Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 464 LNLSTLNDRTIKVDFA 511 +N +++ R I+VD A Sbjct: 66 MNGKSVDGRQIRVDQA 81
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 45.4 bits (106), Expect = 4e-04 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 1/160 (0%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSAL 457 KT L +P + T D+ L + G +V + + ++ K +G FV S A A+ Sbjct: 61 KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV 120 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 S L ++ AK +++ P +++ NL + + L + Sbjct: 121 -----SALKANGVQAQMAKQQEQDPTN---------LYISNLPLSMDEQELENMLKPFGQ 166 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 V S V+ ++ R G GF S E+ EA I FNGK Sbjct: 167 VISTRVLRDSSGASR--GVGFARMESTEKCEAVIGHFNGK 204 Score = 31.2 bits (69), Expect = 8.5 Identities = 17/74 (22%), Positives = 35/74 (47%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 A ++++P T L N+P + ++ + + G V+ + SS +RG+ F M Sbjct: 133 AKQQEQDP----TNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGASRGVGFARM 188 Query: 428 GSEEEALSALKNLN 469 S E+ + + + N Sbjct: 189 ESTEKCEAVIGHFN 202
>Q5R6W3:RBM18_PONPY Probable RNA-binding protein 18 - Pongo pygmaeus (Orangutan)| Length = 190 Score = 45.4 bits (106), Expect = 4e-04 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT--TPRRSAGYGFVSFSSKEEA 727 E + +++GNL ++ HL +L V+ + +FH + + GY FV+F +K+EA Sbjct: 23 EGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEA 82 Query: 728 EAAISTFNGKELMGRSINVMFKEDTPKK 811 E AI NGK + + + V + K+ Sbjct: 83 EQAIQCLNGKLALSKKLVVRWAHAQVKR 110
>Q9CR83:RBM18_MOUSE Probable RNA-binding protein 18 - Mus musculus (Mouse)| Length = 190 Score = 45.4 bits (106), Expect = 4e-04 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT--TPRRSAGYGFVSFSSKEEA 727 E + +++GNL ++ HL +L V+ + +FH + + GY FV+F +K+EA Sbjct: 23 EGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEA 82 Query: 728 EAAISTFNGKELMGRSINVMFKEDTPKK 811 E AI NGK + + + V + K+ Sbjct: 83 EQAIQCLNGKLALSKKLVVRWAHAQVKR 110
>Q96H35:RBM18_HUMAN Probable RNA-binding protein 18 - Homo sapiens (Human)| Length = 190 Score = 45.4 bits (106), Expect = 4e-04 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT--TPRRSAGYGFVSFSSKEEA 727 E + +++GNL ++ HL +L V+ + +FH + + GY FV+F +K+EA Sbjct: 23 EGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEA 82 Query: 728 EAAISTFNGKELMGRSINVMFKEDTPKK 811 E AI NGK + + + V + K+ Sbjct: 83 EQAIQCLNGKLALSKKLVVRWAHAQVKR 110
>Q8WN55:PTBP1_BOVIN Polypyrimidine tract-binding protein 1 - Bos taurus (Bovine)| Length = 531 Score = 45.4 bits (106), Expect = 4e-04 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +2 Query: 278 PKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTMGSEEEALSAL 457 P L NIP ++ DD+++LF G +V +K+R +A + MGS EEA+ AL Sbjct: 452 PSATLHLSNIPPSISEDDLKILFSSNGGIVK---GFKFFQKDRKMALIQMGSVEEAIQAL 508 Query: 458 KNLNLSTLND-RTIKVDFAK 514 +L+ L + ++V F+K Sbjct: 509 IDLHNHDLGENHHLRVSFSK 528
>Q5F3T7:CELF1_CHICK CUG-BP- and ETR-3-like factor 1 - Gallus gallus (Chicken)| Length = 489 Score = 45.4 bits (106), Expect = 4e-04 Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 6/191 (3%) Frame = +2 Query: 263 EEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSK---KNRGLAFVTMGS 433 ++P ++ +P D+R LFE+ G V ++ + S+ +++G FVT + Sbjct: 9 DQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYT 68 Query: 434 EEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPA--VPSAPVEKNVVFVGNLTWRVRSRH 607 + AL A + L++ I P + +PA + VE +F+G ++ + Sbjct: 69 RKAALEA-----QNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNEND 123 Query: 608 LRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELM-GRSINV 784 +R +F+ ++ ++ S G FV+F+++ A+ AI + + M G S + Sbjct: 124 IRVMFSPFGQIEECRIL--RGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPI 181 Query: 785 MFKEDTPKKNK 817 + K +K+K Sbjct: 182 VVKFADTQKDK 192 Score = 34.3 bits (77), Expect = 1.0 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 1/123 (0%) Frame = +2 Query: 428 GSEEEALSALKNL-NLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSR 604 G ++ A +AL L N S L ++I A +K+ P E +F+ +L + Sbjct: 368 GIQQYAAAALPTLYNQSLLTQQSIGA--AGSQKEGP-------EGANLFIYHLPQEFGDQ 418 Query: 605 HLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINV 784 L ++F V S +V T S +GFVS+ + A+AAI + NG ++ + + V Sbjct: 419 DLLQMFMPFGNVVSAKVFIDKQT-NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKV 477 Query: 785 MFK 793 K Sbjct: 478 QLK 480 Score = 32.3 bits (72), Expect = 3.8 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 AD+E V + I M I +DIRV+F G + + + +RG AFVT Sbjct: 97 ADSEKNNAVEDRKLFIGM-ISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155 Query: 428 GSEEEALSALKNLN 469 + A +A+K ++ Sbjct: 156 TTRAMAQTAIKAMH 169
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 45.1 bits (105), Expect = 6e-04 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 1/160 (0%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSAL 457 KT L +P + T D+ L + G +V + + ++ K +G FV S A A+ Sbjct: 61 KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV 120 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 L S ++ AK +++ P +++ NL + + L + Sbjct: 121 SALKASG-----VQAQMAKQQEQDPTN---------LYISNLPLSMDEQELENMLKPFGQ 166 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 V S V+ ++ R G GF S E+ EA I FNGK Sbjct: 167 VISTRVLRDSSGTSR--GVGFARMESTEKCEAVIGHFNGK 204 Score = 31.2 bits (69), Expect = 8.5 Identities = 17/74 (22%), Positives = 35/74 (47%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 A ++++P T L N+P + ++ + + G V+ + SS +RG+ F M Sbjct: 133 AKQQEQDP----TNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARM 188 Query: 428 GSEEEALSALKNLN 469 S E+ + + + N Sbjct: 189 ESTEKCEAVIGHFN 202
>Q66J99:RBM18_XENLA Probable RNA-binding protein 18 - Xenopus laevis (African clawed| frog) Length = 190 Score = 45.1 bits (105), Expect = 6e-04 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Frame = +2 Query: 566 VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSA--GYGFVSFSSKEEAEAAI 739 +++GN+ ++ HL +L V+ + +FH + P GY FV+F +K EAE AI Sbjct: 27 LWIGNVDPKITEYHLLKLLQKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFETKAEAERAI 86 Query: 740 STFNGKELMGRSINV 784 NGK + + + V Sbjct: 87 HCLNGKMALSKKLVV 101
>Q3ZCC5:RBM18_BOVIN Probable RNA-binding protein 18 - Bos taurus (Bovine)| Length = 190 Score = 45.1 bits (105), Expect = 6e-04 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +2 Query: 554 EKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTT--TPRRSAGYGFVSFSSKEEA 727 E + +++GNL ++ HL L V+ + +FH + + GY FV+F +K+EA Sbjct: 23 EGHRLWIGNLDPKITEYHLLRLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEA 82 Query: 728 EAAISTFNGKELMGRSINVMFKEDTPKK 811 E AI NGK + + + V + K+ Sbjct: 83 EQAIQCLNGKLALSKKLVVRWAHAQVKR 110
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 45.1 bits (105), Expect = 6e-04 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 16/152 (10%) Frame = +2 Query: 407 GLAFVTMGSEEEALSALK-------NLNLSTLND-------RTIKVDFAKPKKKQPAVPS 544 G FV ++++A AL N T N RT ++++A Q ++PS Sbjct: 129 GYCFVEFETQKDAKFALSLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPS 188 Query: 545 APVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAG--YGFVSFSSK 718 P + +FVG+L+ L LF + +SV+ + T P + +GFV F + Sbjct: 189 TP--EFSLFVGDLSPTATEADLLSLFQTR--FKSVKTVRVMTDPLTGSSRCFGFVRFGDE 244 Query: 719 EEAEAAISTFNGKELMGRSINVMFKEDTPKKN 814 +E A+ +GK GR++ V + TP+ N Sbjct: 245 DERRRALIEMSGKWFQGRALRVAYA--TPRNN 274
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 44.7 bits (104), Expect = 7e-04 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = +2 Query: 320 TPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTI 496 T D+R +F K G + DV + S+++RG AFV + ++A A + N L+ R I Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 189 Query: 497 KVDFAKPKKKQPAVP 541 +VDF+ K+ P Sbjct: 190 RVDFSITKRPHTPTP 204
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 44.7 bits (104), Expect = 7e-04 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = +2 Query: 320 TPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTI 496 T D+R +F K G + DV + S+++RG AFV + ++A A + N L+ R I Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 189 Query: 497 KVDFAKPKKKQPAVP 541 +VDF+ K+ P Sbjct: 190 RVDFSITKRPHTPTP 204
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 44.7 bits (104), Expect = 7e-04 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = +2 Query: 320 TPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTI 496 T D+R +F K G + DV + S+++RG AFV + ++A A + N L+ R I Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 189 Query: 497 KVDFAKPKKKQPAVP 541 +VDF+ K+ P Sbjct: 190 RVDFSITKRPHTPTP 204
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 44.7 bits (104), Expect = 7e-04 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = +2 Query: 320 TPDDIRVLFEKQGTVVDVELSM-HSSKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTI 496 T D+R +F K G + DV + S+++RG AFV + ++A A + N L+ R I Sbjct: 130 TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 189 Query: 497 KVDFAKPKKKQPAVP 541 +VDF+ K+ P Sbjct: 190 RVDFSITKRPHTPTP 204
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos| taurus (Bovine) Length = 403 Score = 44.7 bits (104), Expect = 7e-04 Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 1/160 (0%) Frame = +2 Query: 281 KTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMH-SSKKNRGLAFVTMGSEEEALSAL 457 KT L +P + T D+ L + G +V + + ++ K +G FV S A A+ Sbjct: 61 KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAV 120 Query: 458 KNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPG 637 L S ++ AK +++ P +++ NL + + L + Sbjct: 121 SALKASG-----VQAQMAKQQEQDPTN---------LYISNLPLSMDEQELENMLKPFGQ 166 Query: 638 VQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGK 757 V S ++ ++ R G GF S E+ EA I FNGK Sbjct: 167 VISTRILRDSSGTSR--GVGFARMESTEKCEAVIGHFNGK 204 Score = 31.6 bits (70), Expect = 6.5 Identities = 17/74 (22%), Positives = 35/74 (47%) Frame = +2 Query: 248 ADAEDEEPVGPKTRLIAMNIPWDVTPDDIRVLFEKQGTVVDVELSMHSSKKNRGLAFVTM 427 A ++++P T L N+P + ++ + + G V+ + SS +RG+ F M Sbjct: 133 AKQQEQDP----TNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARM 188 Query: 428 GSEEEALSALKNLN 469 S E+ + + + N Sbjct: 189 ESTEKCEAVIGHFN 202
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 44.7 bits (104), Expect = 7e-04 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 1/141 (0%) Frame = +2 Query: 320 TPDDIRVLFEKQGTVVDVELSMHSS-KKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTI 496 T +++++ + + G VVDV + ++ K++RG F+T A +N ++ +T+ Sbjct: 44 TEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN-RPHIIDGKTV 102 Query: 497 KVDFAKPKKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTP 676 + A P+ ++ + + +FVG L LRE F V SV+++ TT Sbjct: 103 EAKRALPRPERES-RETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTG 161 Query: 677 RRSAGYGFVSFSSKEEAEAAI 739 +R G+ FV F + + AI Sbjct: 162 KR-RGFAFVEFDDYDAVDKAI 181 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 176,422,059 Number of extensions: 3604801 Number of successful extensions: 11277 Number of sequences better than 10.0: 492 Number of HSP's gapped: 10914 Number of HSP's successfully gapped: 800 Length of query: 387 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 272 Effective length of database: 69,142,514 Effective search space: 18806763808 Effective search space used: 18806763808 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
