ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf7d06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009514.1| Triticum aestivum clone wr1.pk0099.b12:fis, full insert mRNA sequence Length = 1323 Score = 1277 bits (644), Expect = 0.0 Identities = 857/925 (92%), Gaps = 11/925 (1%) Strand = Plus / Plus Query: 304 cgaccagaatccggcgcggcggccgctggtcctgcgttccggcgcggggaggaggagcgc 363 |||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| | Sbjct: 64 cgaccagaatccggcgcggcggccgctggtcctgcgcaccgacgcggggagccggagcac 123 Query: 364 cgatccgatccgtggcgccgccaggctgaagggcctgtgctgccagaaatcggcagatgc 423 |||||| |||||||||||| || || |||| |||||||||||| |||||||||| Sbjct: 124 cgatcccatccgtggcgcc---agcctcaaggccctgtgctgccacaaatcggcag---- 176 Query: 424 aggtactgaggaagtccattattctgctgacgaggctcttgtactcaagcaaaaagcaga 483 |||||||| ||| ||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 177 --gtactgagaaagcccactattctgctgatgaggctctcgtactaaagcaaaaagcaga 234 Query: 484 ggacgtgctcccttacctgaatgaccgatgtgtttatctagttggaatgatgggttctgg 543 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 235 ggacgtgctcccttacctgaatgaccgctgtgtttatctagttggaatgatgggttccgg 294 Query: 544 caaaactacagttgggaagataatagctgaagtactaggctattccttctttgacagtga 603 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 295 caaaactacagttgggaagataatagctgaagtactaggctattcattctttgacagtga 354 Query: 604 taagctggttgagcagtctgttggcataccgtcggttgctgagattttccaggtccatag 663 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 355 taagctggttgagcagtctgttggcataccgtcggtggctgagatttttcaggtccacag 414 Query: 664 tgaagcattcttcagagataacgagagtgaggtgctcagggatttgtcatcaatgcaccg 723 ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 415 tgaagcattcttcagagataacgagagtgaggtactaagggatttgtcgtcaatgcaccg 474 Query: 724 gttaattgttgcaacaggaggtggtgcggtgatacgaccaatcaattggagttatatgag 783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 attaattgttgcaacaggaggtggtgcggtgatacgaccaatcaattggagttatatgaa 534 Query: 784 gaaaggactcactatctggttagatgttccagtggacgcccttgcaagaaggattgctgc 843 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 535 gaaaggactcactatttggttagatgttccattggacgcccttgcaagaaggattgctgc 594 Query: 844 ggtcggtacagcttcacggcccctcttgcatcatgaatctggagatccttatgcgaaggc 903 ||| ||||| || ||||| |||||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 595 ggttggtactgcgtcacgacccctcctgcatcaggaatctggtgatccttatgcaaaggc 654 Query: 904 ctatgcaaaacttgcgacactttttgaacaaagaatggactcatatgctaatgctgatgc 963 |||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 655 ctatgccaaacttacagcactttttgaacaaagaatggattcatatgctaatgctgatgc 714 Query: 964 ccgagtttcccttgaaaatattgcattcagacaaggccataatgatgtgaatgtacttac 1023 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 715 ccgagtttcccttgaaaatattgcattcaaacaaggacataatgatgtgaatgtacttac 774 Query: 1024 accaagtgccatcgctattgaggcattgctaaagatggagagctttcttactgagaaggc 1083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 accaagtgccatcgctattgaggcattgctaaagatggagagctttcttactgagaaggc 834 Query: 1084 catggtcagaaactgaccagatatcggtggtttcaaagaacgatgacaacc-acggttct 1142 |||||||||||||||||||||| ||||||||| | ||||| |||||||||| |||||||| Sbjct: 835 catggtcagaaactgaccagatctcggtggttaccaagaaagatgacaaccaacggttct 894 Query: 1143 tggttgtcgtgatgtatatacgtttgcataagacatccttgttgatatagccagagctgt 1202 |||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||||| | Sbjct: 895 tggttgccgtgatgtacatacctttgcataagacattctt-ctgatatagccagagctat 953 Query: 1203 gacagaggaaaacttgggcttttac 1227 ||||||||| |||||||| |||||| Sbjct: 954 gacagaggataacttgggtttttac 978 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1251 tatcttgtcgcggtttgatatatgtgatttgggagtaaatagctat 1296 ||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct: 1033 tatcttgctgcgatttgatatatgggatttgggagtaaatagctat 1078 Score = 42.1 bits (21), Expect = 5.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 253 gcaggaattccccccggcgatattgccggcggcaaggctcg 293 ||||| |||||||||||||| | ||||||||| ||||||| Sbjct: 25 gcagggattccccccggcgacagtgccggcggtgaggctcg 65
>dbj|AB188836.1| Oryza sativa (japonica cultivar-group) OsSK3 mRNA for shikimate kinase 3, complete cds Length = 864 Score = 676 bits (341), Expect = 0.0 Identities = 578/657 (87%) Strand = Plus / Plus Query: 441 attattctgctgacgaggctcttgtactcaagcaaaaagcagaggacgtgctcccttacc 500 |||| |||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 206 attactctgctgatgaagctcttgttctaaagcaaaaagcagaggacgtggtcccttatt 265 Query: 501 tgaatgaccgatgtgtttatctagttggaatgatgggttctggcaaaactacagttggga 560 |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 266 tgaatgaccggtgtatttacttagttggaatgatgggttctggcaaaactacagttggga 325 Query: 561 agataatagctgaagtactaggctattccttctttgacagtgataagctggttgagcagt 620 ||||| ||||||||||| |||||||||| ||||||||||| |||||| |||||||| || Sbjct: 326 agatattagctgaagtattaggctattctttctttgacagcgataagttggttgagaagg 385 Query: 621 ctgttggcataccgtcggttgctgagattttccaggtccatagtgaagcattcttcagag 680 | ||||||||| | || |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 386 cagttggcatatcatctgttgctgaaatctttcagctccatagtgaagcattcttcagag 445 Query: 681 ataacgagagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacag 740 |||| ||||||||||| || ||||||||||| |||||||| || ||| |||||||||| | Sbjct: 446 ataatgagagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccg 505 Query: 741 gaggtggtgcggtgatacgaccaatcaattggagttatatgaggaaaggactcactatct 800 |||||||||||||||| |||||||||||||||||||| |||| |||||| || |||| Sbjct: 506 gaggtggtgcggtgatccgaccaatcaattggagttacatgaagaaagggtcaacaatct 565 Query: 801 ggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagcttcac 860 |||||||||||||| |||| || ||||||||| | |||||||| || || || ||||| | Sbjct: 566 ggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgcttctc 625 Query: 861 ggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaacttgcga 920 |||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 626 ggcccctcttgcatcaagaatctggtgatccttatgcaaaggcttatgcaaaactgactg 685 Query: 921 cactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttcccttgaaa 980 |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||| Sbjct: 686 cactttttgaacaaagaatggactcatatgctaatgctgatgccagggtttcactcgaac 745 Query: 981 atattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatcgcta 1040 |||||||| | | |||||| |||| | |||||| |||||||||||||||||| |||| Sbjct: 746 atattgcagtgaaacaaggacatagtaatgtgacgacacttacaccaagtgccattgcta 805 Query: 1041 ttgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaact 1097 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 806 ttgaggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaact 862 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Plus Query: 194 atggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 ||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 1 atggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 49
>gb|BT016432.1| Zea mays clone Contig265 mRNA sequence Length = 1310 Score = 525 bits (265), Expect = e-145 Identities = 565/665 (84%) Strand = Plus / Plus Query: 437 gtccattattctgctgacgaggctcttgtactcaagcaaaaagcagaggacgtgctccct 496 ||||| || |||||||| || ||||| |||| |||||||||| |||| || || ||| Sbjct: 446 gtccactactctgctgatgacgctctcatactacagcaaaaagcccaggatgttctgcct 505 Query: 497 tacctgaatgaccgatgtgtttatctagttggaatgatgggttctggcaaaactacagtt 556 ||| || ||| ||| || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 506 tacttggatggccgttgcgtttatcttgttggaatgatgggttcaggcaaaactacagtt 565 Query: 557 gggaagataatagctgaagtactaggctattccttctttgacagtgataagctggttgag 616 ||||||||| || | ||||| |||| ||||||||||| |||||||||||| |||| ||| Sbjct: 566 gggaagatactatccgaagtgttaggttattccttcttcgacagtgataagttggtagag 625 Query: 617 cagtctgttggcataccgtcggttgctgagattttccaggtccatagtgaagcattcttc 676 || ||||||| || | || ||||||||||| || ||| ||||||| ||| |||||||| Sbjct: 626 aaggctgttggtatttcatctgttgctgagatctttcagctccatagcgaaacattcttc 685 Query: 677 agagataacgagagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgca 736 |||||||| ||||||||||| || |||||| ||||||||||||| ||||| |||||||| Sbjct: 686 agagataatgagagtgaggtcctgagggatctgtcatcaatgcatcggttggttgttgca 745 Query: 737 acaggaggtggtgcggtgatacgaccaatcaattggagttatatgaggaaaggactcact 796 || ||||||||||| ||||| |||||||||||||||||||| |||| |||||| || || Sbjct: 746 accggaggtggtgcagtgatccgaccaatcaattggagttacatgaagaaagggctgacc 805 Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 | ||| ||||||| ||| |||| || ||||||||||| | |||||| || || || || Sbjct: 806 gtatgggtagatgtcccactggatgcacttgcaagaagaaatgctgctgtaggaaccgcg 865 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaactt 916 || || || ||||||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 866 tctcgaccactcttgcatcaggaatctggtgatccttatgcaaaggcttatgcaaaactt 925 Query: 917 gcgacactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttccctt 976 | |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 926 acatcactttttgagcaaagaatggactcgtatgctaatgctgatgccagagtttcactt 985 Query: 977 gaaaatattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatc 1036 ||| |||||||||| | ||||| |||||||||||| | | |||||||||| ||| ||||| Sbjct: 986 gaacatattgcattaaaacaagcccataatgatgtcactatacttacacctagtaccatc 1045 Query: 1037 gctattgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaac 1096 || ||||||||||||||||||||||| || |||||||| || ||| ||| |||||||||| Sbjct: 1046 gccattgaggcattgctaaagatggaaagttttcttaccgaaaagaccacggtcagaaac 1105 Query: 1097 tgacc 1101 ||||| Sbjct: 1106 tgacc 1110
>emb|CT832525.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN078H21, full insert sequence Length = 1148 Score = 313 bits (158), Expect = 9e-82 Identities = 269/306 (87%) Strand = Plus / Plus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 663 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 722 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaactt 916 || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 723 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaaggcttatgcaaaactg 782 Query: 917 gcgacactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttccctt 976 | |||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 783 actgcactttttgaacaaagaatggactcatatgctaatgctgatgccagggtttcactc 842 Query: 977 gaaaatattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatc 1036 ||| |||||||| | | |||||| |||| | |||||| |||||||||||||||||| Sbjct: 843 gaacatattgcagtgaaacaaggacatagtaatgtgacgacacttacaccaagtgccatt 902 Query: 1037 gctattgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaac 1096 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 903 gctattgaggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaac 962 Query: 1097 tgacca 1102 | |||| Sbjct: 963 taacca 968 Score = 270 bits (136), Expect = 1e-68 Identities = 217/244 (88%) Strand = Plus / Plus Query: 441 attattctgctgacgaggctcttgtactcaagcaaaaagcagaggacgtgctcccttacc 500 |||| |||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 390 attactctgctgatgaagctcttgttctaaagcaaaaagcagaggacgtggtcccttatt 449 Query: 501 tgaatgaccgatgtgtttatctagttggaatgatgggttctggcaaaactacagttggga 560 |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 450 tgaatgaccggtgtatttacttagttggaatgatgggttctggcaaaactacagttggga 509 Query: 561 agataatagctgaagtactaggctattccttctttgacagtgataagctggttgagcagt 620 ||||| ||||||||||| |||||||||| ||||||||||| |||||| |||||||| || Sbjct: 510 agatattagctgaagtattaggctattctttctttgacagcgataagttggttgagaagg 569 Query: 621 ctgttggcataccgtcggttgctgagattttccaggtccatagtgaagcattcttcagag 680 | ||||||||| | || |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 570 cagttggcatatcatctgttgctgaaatctttcagctccatagtgaagcattcttcagag 629 Query: 681 ataa 684 |||| Sbjct: 630 ataa 633 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 176 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 233
>ref|NM_001060572.1| Oryza sativa (japonica cultivar-group) Os04g0640600 (Os04g0640600) mRNA, complete cds Length = 1168 Score = 313 bits (158), Expect = 9e-82 Identities = 269/306 (87%) Strand = Plus / Plus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 657 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 716 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaactt 916 || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 717 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaaggcttatgcaaaactg 776 Query: 917 gcgacactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttccctt 976 | |||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 777 actgcactttttgaacaaagaatggactcatatgctaatgctgatgccagggtttcactc 836 Query: 977 gaaaatattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatc 1036 ||| |||||||| | | |||||| |||| | |||||| |||||||||||||||||| Sbjct: 837 gaacatattgcagtgaaacaaggacatagtaatgtgacgacacttacaccaagtgccatt 896 Query: 1037 gctattgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaac 1096 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 897 gctattgaggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaac 956 Query: 1097 tgacca 1102 | |||| Sbjct: 957 taacca 962 Score = 270 bits (136), Expect = 1e-68 Identities = 217/244 (88%) Strand = Plus / Plus Query: 441 attattctgctgacgaggctcttgtactcaagcaaaaagcagaggacgtgctcccttacc 500 |||| |||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 384 attactctgctgatgaagctcttgttctaaagcaaaaagcagaggacgtggtcccttatt 443 Query: 501 tgaatgaccgatgtgtttatctagttggaatgatgggttctggcaaaactacagttggga 560 |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tgaatgaccggtgtatttacttagttggaatgatgggttctggcaaaactacagttggga 503 Query: 561 agataatagctgaagtactaggctattccttctttgacagtgataagctggttgagcagt 620 ||||| ||||||||||| |||||||||| ||||||||||| |||||| |||||||| || Sbjct: 504 agatattagctgaagtattaggctattctttctttgacagcgataagttggttgagaagg 563 Query: 621 ctgttggcataccgtcggttgctgagattttccaggtccatagtgaagcattcttcagag 680 | ||||||||| | || |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 564 cagttggcatatcatctgttgctgaaatctttcagctccatagtgaagcattcttcagag 623 Query: 681 ataa 684 |||| Sbjct: 624 ataa 627 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 170 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 227
>dbj|AK070318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052O21, full insert sequence Length = 1167 Score = 313 bits (158), Expect = 9e-82 Identities = 269/306 (87%) Strand = Plus / Plus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 657 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 716 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaactt 916 || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 717 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaaggcttatgcaaaactg 776 Query: 917 gcgacactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttccctt 976 | |||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 777 actgcactttttgaacaaagaatggactcatatgctaatgctgatgccagggtttcactc 836 Query: 977 gaaaatattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatc 1036 ||| |||||||| | | |||||| |||| | |||||| |||||||||||||||||| Sbjct: 837 gaacatattgcagtgaaacaaggacatagtaatgtgacgacacttacaccaagtgccatt 896 Query: 1037 gctattgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaac 1096 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 897 gctattgaggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaac 956 Query: 1097 tgacca 1102 | |||| Sbjct: 957 taacca 962 Score = 270 bits (136), Expect = 1e-68 Identities = 217/244 (88%) Strand = Plus / Plus Query: 441 attattctgctgacgaggctcttgtactcaagcaaaaagcagaggacgtgctcccttacc 500 |||| |||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 384 attactctgctgatgaagctcttgttctaaagcaaaaagcagaggacgtggtcccttatt 443 Query: 501 tgaatgaccgatgtgtttatctagttggaatgatgggttctggcaaaactacagttggga 560 |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tgaatgaccggtgtatttacttagttggaatgatgggttctggcaaaactacagttggga 503 Query: 561 agataatagctgaagtactaggctattccttctttgacagtgataagctggttgagcagt 620 ||||| ||||||||||| |||||||||| ||||||||||| |||||| |||||||| || Sbjct: 504 agatattagctgaagtattaggctattctttctttgacagcgataagttggttgagaagg 563 Query: 621 ctgttggcataccgtcggttgctgagattttccaggtccatagtgaagcattcttcagag 680 | ||||||||| | || |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 564 cagttggcatatcatctgttgctgaaatctttcagctccatagtgaagcattcttcagag 623 Query: 681 ataa 684 |||| Sbjct: 624 ataa 627 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 170 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 227
>dbj|AK067948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F09, full insert sequence Length = 2127 Score = 313 bits (158), Expect = 9e-82 Identities = 269/306 (87%) Strand = Plus / Plus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 1618 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 1677 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaactt 916 || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1678 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaaggcttatgcaaaactg 1737 Query: 917 gcgacactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttccctt 976 | |||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1738 actgcactttttgaacaaagaatggactcatatgctaatgctgatgccagggtttcactc 1797 Query: 977 gaaaatattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatc 1036 ||| |||||||| | | |||||| |||| | |||||| |||||||||||||||||| Sbjct: 1798 gaacatattgcagtgaaacaaggacatagtaatgtgacgacacttacaccaagtgccatt 1857 Query: 1037 gctattgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaac 1096 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 1858 gctattgaggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaac 1917 Query: 1097 tgacca 1102 | |||| Sbjct: 1918 taacca 1923 Score = 198 bits (100), Expect = 4e-47 Identities = 145/160 (90%) Strand = Plus / Plus Query: 441 attattctgctgacgaggctcttgtactcaagcaaaaagcagaggacgtgctcccttacc 500 |||| |||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 902 attactctgctgatgaagctcttgttctaaagcaaaaagcagaggacgtggtcccttatt 961 Query: 501 tgaatgaccgatgtgtttatctagttggaatgatgggttctggcaaaactacagttggga 560 |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 962 tgaatgaccggtgtatttacttagttggaatgatgggttctggcaaaactacagttggga 1021 Query: 561 agataatagctgaagtactaggctattccttctttgacag 600 ||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1022 agatattagctgaagtattaggctattctttctttgacag 1061 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Plus Query: 687 agagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtg 746 |||||||||| || ||||||||||| |||||||| || ||| |||||||||| ||||||| Sbjct: 1432 agagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccggaggtg 1491 Query: 747 gtgcggtgatacgaccaatcaattgg 772 |||||||||| ||||||||||||||| Sbjct: 1492 gtgcggtgatccgaccaatcaattgg 1517 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 602 gataagctggttgagcagtctgttggcataccgtcggttgctgagattttccaggtccat 661 |||||| |||||||| || | ||||||||| | || |||||||| || || ||| ||||| Sbjct: 1161 gataagttggttgagaaggcagttggcatatcatctgttgctgaaatctttcagctccat 1220 Query: 662 agtgaagcattcttcagagataa 684 ||||||||||||||||||||||| Sbjct: 1221 agtgaagcattcttcagagataa 1243
>emb|CT829505.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104H19, full insert sequence Length = 1792 Score = 226 bits (114), Expect = 2e-55 Identities = 216/250 (86%) Strand = Plus / Plus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 1201 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 1260 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaaggcctatgcaaaactt 916 || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1261 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaaggcttatgcaaaactg 1320 Query: 917 gcgacactttttgaacaaagaatggactcatatgctaatgctgatgcccgagtttccctt 976 | |||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1321 accgcactttttgaacaaagaatggactcatatgctaatgctgatgccagggtttcactc 1380 Query: 977 gaaaatattgcattcagacaaggccataatgatgtgaatgtacttacaccaagtgccatc 1036 ||| |||||||| | | |||||| |||| | |||||| |||||||||||||||||| Sbjct: 1381 gaacatattgcagtgaaacaaggacatagtaatgtgacgacacttacaccaagtgccatt 1440 Query: 1037 gctattgagg 1046 |||||||||| Sbjct: 1441 gctattgagg 1450 Score = 194 bits (98), Expect = 6e-46 Identities = 143/158 (90%) Strand = Plus / Plus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 668 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 727 Query: 587 tccttctttgacagtgataagctggttgagcagtctgttggcataccgtcggttgctgag 646 || ||||||||||| |||||| |||||||| || | ||||||||| | || |||||||| Sbjct: 728 tctttctttgacagcgataagttggttgagaaggcagttggcatatcatctgttgctgaa 787 Query: 647 attttccaggtccatagtgaagcattcttcagagataa 684 || || ||| |||||||||||||||||||||||||||| Sbjct: 788 atctttcagctccatagtgaagcattcttcagagataa 825 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Plus Query: 687 agagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtg 746 |||||||||| || ||||||||||| |||||||| || ||| |||||||||| ||||||| Sbjct: 1015 agagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccggaggtg 1074 Query: 747 gtgcggtgatacgaccaatcaattgg 772 |||||||||| ||||||||||||||| Sbjct: 1075 gtgcggtgatccgaccaatcaattgg 1100 Score = 93.7 bits (47), Expect = 2e-15 Identities = 56/59 (94%) Strand = Plus / Plus Query: 1044 aggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaactgacca 1102 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 1521 aggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaactaacca 1579 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 174 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 231 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 471 agcaaaaagcagaggacgtgctcccttacctgaatgaccgatgtgtttatctagttgg 528 |||||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||| Sbjct: 529 agcaaaaagcagaggacgtggtcccttatttgaatgaccggtgtatttacttagttgg 586
>gb|BT009529.1| Triticum aestivum clone wr1.pk0122.a3:fis, full insert mRNA sequence Length = 1061 Score = 125 bits (63), Expect = 4e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 521 ctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtacta 580 |||||||||||||||||||| || |||| ||| || |||||||| | |||||||| | Sbjct: 206 ctagttggaatgatgggttcggggaaaagtacggtggggaagatcttggctgaagttttg 265 Query: 581 ggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgtcggtt 640 || ||||| ||||| ||||||||||| |||| || || |||||||||| || || ||| Sbjct: 266 ggttattcattcttcgacagtgataaattggtcgaacaagctgttggcatgccttcagtt 325 Query: 641 gctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgaggtgctc 700 ||| | |||||| |||| ||||||||||| |||||||||||||| |||||| || | Sbjct: 326 gctcaaattttcaaggttcatagtgaagccttcttcagagataatgagagtagtgtcttg 385 Query: 701 agggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtgatacga 760 ||||||||||| ||||||| || ||| ||||||| || ||||||||||| || || ||| Sbjct: 386 agggatttgtcctcaatgcggcgattagttgttgctactggaggtggtgctgttatccga 445 Query: 761 cca 763 ||| Sbjct: 446 cca 448
>emb|CR855225.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0138H21-OSIGBa0138E01, complete sequence Length = 129321 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 103646 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 103587 Query: 587 tccttctttgacag 600 || ||||||||||| Sbjct: 103586 tctttctttgacag 103573 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 103016 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 102957 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaagg 902 || ||||||||||||||||| |||||||| ||||||||||| |||| Sbjct: 102956 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaagg 102911 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Minus Query: 687 agagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtg 746 |||||||||| || ||||||||||| |||||||| || ||| |||||||||| ||||||| Sbjct: 103202 agagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccggaggtg 103143 Query: 747 gtgcggtgatacgaccaatcaattgg 772 |||||||||| ||||||||||||||| Sbjct: 103142 gtgcggtgatccgaccaatcaattgg 103117 Score = 93.7 bits (47), Expect = 2e-15 Identities = 56/59 (94%) Strand = Plus / Minus Query: 1044 aggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaactgacca 1102 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 102454 aggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaactaacca 102396 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 900 aggcctatgcaaaacttgcgacactttttgaacaaagaatggactcatatgctaatgctg 959 |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102829 aggcttatgcaaaactgactgcactttttgaacaaagaatggactcatatgctaatgctg 102770 Query: 960 atgcc 964 ||||| Sbjct: 102769 atgcc 102765 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 602 gataagctggttgagcagtctgttggcataccgtcggttgctgagattttccaggtccat 661 |||||| |||||||| || | ||||||||| | || |||||||| || || ||| ||||| Sbjct: 103473 gataagttggttgagaaggcagttggcatatcatctgttgctgaaatctttcagctccat 103414 Query: 662 agtgaagcattcttcagagataa 684 ||||||||||||||||||||||| Sbjct: 103413 agtgaagcattcttcagagataa 103391 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 105525 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 105468 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 agcaaaaagcagaggacgtgctcccttacctgaatgaccgatgtgtttatctagttgg 528 |||||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||| Sbjct: 103785 agcaaaaagcagaggacgtggtcccttatttgaatgaccggtgtatttacttagttgg 103728 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1018 acttacaccaagtgccatcgctattgagg 1046 |||||||||||||||||| |||||||||| Sbjct: 102553 acttacaccaagtgccattgctattgagg 102525
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 32617551 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 32617492 Query: 587 tccttctttgacag 600 || ||||||||||| Sbjct: 32617491 tctttctttgacag 32617478 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 32616921 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 32616862 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaagg 902 || ||||||||||||||||| |||||||| ||||||||||| |||| Sbjct: 32616861 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaagg 32616816 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Minus Query: 687 agagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtg 746 |||||||||| || ||||||||||| |||||||| || ||| |||||||||| ||||||| Sbjct: 32617107 agagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccggaggtg 32617048 Query: 747 gtgcggtgatacgaccaatcaattgg 772 |||||||||| ||||||||||||||| Sbjct: 32617047 gtgcggtgatccgaccaatcaattgg 32617022 Score = 93.7 bits (47), Expect = 2e-15 Identities = 56/59 (94%) Strand = Plus / Minus Query: 1044 aggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaactgacca 1102 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 32616359 aggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaactaacca 32616301 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 900 aggcctatgcaaaacttgcgacactttttgaacaaagaatggactcatatgctaatgctg 959 |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 32616734 aggcttatgcaaaactgactgcactttttgaacaaagaatggactcatatgctaatgctg 32616675 Query: 960 atgcc 964 ||||| Sbjct: 32616674 atgcc 32616670 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 602 gataagctggttgagcagtctgttggcataccgtcggttgctgagattttccaggtccat 661 |||||| |||||||| || | ||||||||| | || |||||||| || || ||| ||||| Sbjct: 32617378 gataagttggttgagaaggcagttggcatatcatctgttgctgaaatctttcagctccat 32617319 Query: 662 agtgaagcattcttcagagataa 684 ||||||||||||||||||||||| Sbjct: 32617318 agtgaagcattcttcagagataa 32617296 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 32619430 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 32619373 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 agcaaaaagcagaggacgtgctcccttacctgaatgaccgatgtgtttatctagttgg 528 |||||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||| Sbjct: 32617690 agcaaaaagcagaggacgtggtcccttatttgaatgaccggtgtatttacttagttgg 32617633 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1018 acttacaccaagtgccatcgctattgagg 1046 |||||||||||||||||| |||||||||| Sbjct: 32616458 acttacaccaagtgccattgctattgagg 32616430
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 136285 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 136226 Query: 587 tccttctttgacag 600 || ||||||||||| Sbjct: 136225 tctttctttgacag 136212 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 135655 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 135596 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaagg 902 || ||||||||||||||||| |||||||| ||||||||||| |||| Sbjct: 135595 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaagg 135550 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Minus Query: 687 agagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtg 746 |||||||||| || ||||||||||| |||||||| || ||| |||||||||| ||||||| Sbjct: 135841 agagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccggaggtg 135782 Query: 747 gtgcggtgatacgaccaatcaattgg 772 |||||||||| ||||||||||||||| Sbjct: 135781 gtgcggtgatccgaccaatcaattgg 135756 Score = 93.7 bits (47), Expect = 2e-15 Identities = 56/59 (94%) Strand = Plus / Minus Query: 1044 aggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaactgacca 1102 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 135093 aggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaactaacca 135035 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 900 aggcctatgcaaaacttgcgacactttttgaacaaagaatggactcatatgctaatgctg 959 |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 aggcttatgcaaaactgactgcactttttgaacaaagaatggactcatatgctaatgctg 135409 Query: 960 atgcc 964 ||||| Sbjct: 135408 atgcc 135404 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 602 gataagctggttgagcagtctgttggcataccgtcggttgctgagattttccaggtccat 661 |||||| |||||||| || | ||||||||| | || |||||||| || || ||| ||||| Sbjct: 136112 gataagttggttgagaaggcagttggcatatcatctgttgctgaaatctttcagctccat 136053 Query: 662 agtgaagcattcttcagagataa 684 ||||||||||||||||||||||| Sbjct: 136052 agtgaagcattcttcagagataa 136030 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 138164 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 138107 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 agcaaaaagcagaggacgtgctcccttacctgaatgaccgatgtgtttatctagttgg 528 |||||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||| Sbjct: 136424 agcaaaaagcagaggacgtggtcccttatttgaatgaccggtgtatttacttagttgg 136367 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1018 acttacaccaagtgccatcgctattgagg 1046 |||||||||||||||||| |||||||||| Sbjct: 135192 acttacaccaagtgccattgctattgagg 135164
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 12572 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 12513 Query: 587 tccttctttgacag 600 || ||||||||||| Sbjct: 12512 tctttctttgacag 12499 Score = 107 bits (54), Expect = 1e-19 Identities = 93/106 (87%) Strand = Plus / Minus Query: 797 atctggttagatgttccagtggacgcccttgcaagaaggattgctgcggtcggtacagct 856 |||||||||||||||||| |||| || ||||||||| | |||||||| || || || ||| Sbjct: 11942 atctggttagatgttccattggatgcacttgcaagacgaattgctgcagtaggaactgct 11883 Query: 857 tcacggcccctcttgcatcatgaatctggagatccttatgcgaagg 902 || ||||||||||||||||| |||||||| ||||||||||| |||| Sbjct: 11882 tctcggcccctcttgcatcaagaatctggtgatccttatgcaaagg 11837 Score = 107 bits (54), Expect = 1e-19 Identities = 78/86 (90%) Strand = Plus / Minus Query: 687 agagtgaggtgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtg 746 |||||||||| || ||||||||||| |||||||| || ||| |||||||||| ||||||| Sbjct: 12128 agagtgaggtactaagggatttgtcgtcaatgcatcgattagttgttgcaaccggaggtg 12069 Query: 747 gtgcggtgatacgaccaatcaattgg 772 |||||||||| ||||||||||||||| Sbjct: 12068 gtgcggtgatccgaccaatcaattgg 12043 Score = 93.7 bits (47), Expect = 2e-15 Identities = 56/59 (94%) Strand = Plus / Minus Query: 1044 aggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaactgacca 1102 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 11380 aggcattgctaaagatggagagctttcttactgagaaggcaatgatcagaaactaacca 11322 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 900 aggcctatgcaaaacttgcgacactttttgaacaaagaatggactcatatgctaatgctg 959 |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 11755 aggcttatgcaaaactgactgcactttttgaacaaagaatggactcatatgctaatgctg 11696 Query: 960 atgcc 964 ||||| Sbjct: 11695 atgcc 11691 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 602 gataagctggttgagcagtctgttggcataccgtcggttgctgagattttccaggtccat 661 |||||| |||||||| || | ||||||||| | || |||||||| || || ||| ||||| Sbjct: 12399 gataagttggttgagaaggcagttggcatatcatctgttgctgaaatctttcagctccat 12340 Query: 662 agtgaagcattcttcagagataa 684 ||||||||||||||||||||||| Sbjct: 12339 agtgaagcattcttcagagataa 12317 Score = 67.9 bits (34), Expect = 9e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 185 ggagaggagatggacgccggcgtgggtctccggccgaggccccgtgcatgggccggac 242 |||||||||||||||||||| |||||||||||| ||| |||| | || |||||||||| Sbjct: 14451 ggagaggagatggacgccggtgtgggtctccgggcgaagcccggcgcctgggccggac 14394 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 agcaaaaagcagaggacgtgctcccttacctgaatgaccgatgtgtttatctagttgg 528 |||||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||| Sbjct: 12711 agcaaaaagcagaggacgtggtcccttatttgaatgaccggtgtatttacttagttgg 12654 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1018 acttacaccaagtgccatcgctattgagg 1046 |||||||||||||||||| |||||||||| Sbjct: 11479 acttacaccaagtgccattgctattgagg 11451
>ref|NM_001054660.1| Oryza sativa (japonica cultivar-group) Os02g0749300 (Os02g0749300) mRNA, complete cds Length = 1354 Score = 95.6 bits (48), Expect = 4e-16 Identities = 198/248 (79%) Strand = Plus / Plus Query: 516 tttatctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaag 575 |||| ||||||||||||||||||||||| |||| ||| || || ||||| || |||||| Sbjct: 374 tttacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaag 433 Query: 576 tactaggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgt 635 | | || ||||| |||||||| |||||||| |||| || || |||| ||||| || | Sbjct: 434 ttttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgcctt 493 Query: 636 cggttgctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgagg 695 | || ||| | |||||| |||| ||||||||||| ||||| || ||||| |||||| | Sbjct: 494 cagtcgctcaaattttcaaggttcatagtgaagccttctttagggataatgagagtagtg 553 Query: 696 tgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtga 755 | | ||||||||||| |||||| | || ||| ||||||| || ||||||||||| || | Sbjct: 554 tcttgagggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgtta 613 Query: 756 tacgacca 763 | |||||| Sbjct: 614 tccgacca 621
>dbj|AB188834.1| Oryza sativa (japonica cultivar-group) OsSK1 mRNA for shikimate kinase 1, complete cds Length = 927 Score = 95.6 bits (48), Expect = 4e-16 Identities = 198/248 (79%) Strand = Plus / Plus Query: 516 tttatctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaag 575 |||| ||||||||||||||||||||||| |||| ||| || || ||||| || |||||| Sbjct: 296 tttacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaag 355 Query: 576 tactaggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgt 635 | | || ||||| |||||||| |||||||| |||| || || |||| ||||| || | Sbjct: 356 ttttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgcctt 415 Query: 636 cggttgctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgagg 695 | || ||| | |||||| |||| ||||||||||| ||||| || ||||| |||||| | Sbjct: 416 cagtcgctcaaattttcaaggttcatagtgaagccttctttagggataatgagagtagtg 475 Query: 696 tgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtga 755 | | ||||||||||| |||||| | || ||| ||||||| || ||||||||||| || | Sbjct: 476 tcttgagggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgtta 535 Query: 756 tacgacca 763 | |||||| Sbjct: 536 tccgacca 543
>dbj|AK066687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074E04, full insert sequence Length = 1356 Score = 95.6 bits (48), Expect = 4e-16 Identities = 198/248 (79%) Strand = Plus / Plus Query: 516 tttatctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaag 575 |||| ||||||||||||||||||||||| |||| ||| || || ||||| || |||||| Sbjct: 376 tttacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaag 435 Query: 576 tactaggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgt 635 | | || ||||| |||||||| |||||||| |||| || || |||| ||||| || | Sbjct: 436 ttttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgcctt 495 Query: 636 cggttgctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgagg 695 | || ||| | |||||| |||| ||||||||||| ||||| || ||||| |||||| | Sbjct: 496 cagtcgctcaaattttcaaggttcatagtgaagccttctttagggataatgagagtagtg 555 Query: 696 tgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtga 755 | | ||||||||||| |||||| | || ||| ||||||| || ||||||||||| || | Sbjct: 556 tcttgagggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgtta 615 Query: 756 tacgacca 763 | |||||| Sbjct: 616 tccgacca 623
>ref|NM_001063734.1| Oryza sativa (japonica cultivar-group) Os06g0225800 (Os06g0225800) mRNA, partial cds Length = 1917 Score = 85.7 bits (43), Expect = 4e-13 Identities = 187/235 (79%) Strand = Plus / Plus Query: 516 tttatctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaag 575 ||||| |||||||||||||||| || || || | |||||||| |||||| |||| |||| Sbjct: 1073 tttatttagttggaatgatgggctcagggaagagtacagttgcaaagatattagccgaag 1132 Query: 576 tactaggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgt 635 | | || ||||| |||||||||||||||||| ||||||| || | ||||| || || | Sbjct: 1133 ttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgcctt 1192 Query: 636 cggttgctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgagg 695 | ||||| | || ||| ||| || |||||||| || ||||||||||| |||||| | Sbjct: 1193 ctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgagagtagtg 1252 Query: 696 tgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgc 750 | | ||||| ||||| ||||||| || ||| |||||||||| ||||||||||| Sbjct: 1253 tcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgc 1307 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 947 tatgctaatgctgatgcccgagtttcccttgaaaatattgca 988 ||||| ||||||||||| |||||||| |||||| | |||||| Sbjct: 1504 tatgcaaatgctgatgctcgagtttctcttgaagaaattgca 1545
>dbj|AB188835.1| Oryza sativa (japonica cultivar-group) OsSK2 mRNA for shikimate kinase 2, complete cds Length = 924 Score = 85.7 bits (43), Expect = 4e-13 Identities = 187/235 (79%) Strand = Plus / Plus Query: 516 tttatctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaag 575 ||||| |||||||||||||||| || || || | |||||||| |||||| |||| |||| Sbjct: 290 tttatttagttggaatgatgggctcagggaagagtacagttgcaaagatattagccgaag 349 Query: 576 tactaggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgt 635 | | || ||||| |||||||||||||||||| ||||||| || | ||||| || || | Sbjct: 350 ttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgcctt 409 Query: 636 cggttgctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgagg 695 | ||||| | || ||| ||| || |||||||| || ||||||||||| |||||| | Sbjct: 410 ctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgagagtagtg 469 Query: 696 tgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgc 750 | | ||||| ||||| ||||||| || ||| |||||||||| ||||||||||| Sbjct: 470 tcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgc 524 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 947 tatgctaatgctgatgcccgagtttcccttgaaaatattgca 988 ||||| ||||||||||| |||||||| |||||| | |||||| Sbjct: 721 tatgcaaatgctgatgctcgagtttctcttgaagaaattgca 762
>dbj|AK109730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B12, full insert sequence Length = 1918 Score = 85.7 bits (43), Expect = 4e-13 Identities = 187/235 (79%) Strand = Plus / Plus Query: 516 tttatctagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaag 575 ||||| |||||||||||||||| || || || | |||||||| |||||| |||| |||| Sbjct: 1074 tttatttagttggaatgatgggctcagggaagagtacagttgcaaagatattagccgaag 1133 Query: 576 tactaggctattccttctttgacagtgataagctggttgagcagtctgttggcataccgt 635 | | || ||||| |||||||||||||||||| ||||||| || | ||||| || || | Sbjct: 1134 ttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgcctt 1193 Query: 636 cggttgctgagattttccaggtccatagtgaagcattcttcagagataacgagagtgagg 695 | ||||| | || ||| ||| || |||||||| || ||||||||||| |||||| | Sbjct: 1194 ctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgagagtagtg 1253 Query: 696 tgctcagggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgc 750 | | ||||| ||||| ||||||| || ||| |||||||||| ||||||||||| Sbjct: 1254 tcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgc 1308 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 947 tatgctaatgctgatgcccgagtttcccttgaaaatattgca 988 ||||| ||||||||||| |||||||| |||||| | |||||| Sbjct: 1505 tatgcaaatgctgatgctcgagtttctcttgaagaaattgca 1546
>gb|BT016948.1| Zea mays clone E04912705A11.c mRNA sequence Length = 400 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 1040 attgaggcattgctaaagatggagagctttcttactgagaaggccatggtcagaaactga 1099 |||| ||||||| |||| ||||| || |||||||| || ||| ||||||||||||||||| Sbjct: 336 attggggcattgttaaaaatggaaagttttcttaccgaaaagaccatggtcagaaactga 277 Query: 1100 cc 1101 || Sbjct: 276 cc 275
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||| || || || | |||||||| |||||| |||| ||||| | || ||| Sbjct: 6507397 ggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttat 6507338 Query: 587 tccttctttgacagtgataagctggttga 615 || |||||||||||||||||| ||||||| Sbjct: 6507337 tcattctttgacagtgataagttggttga 6507309 Score = 44.1 bits (22), Expect = 1.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 701 agggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgc 750 ||||| ||||| ||||||| || ||| |||||||||| ||||||||||| Sbjct: 6507057 agggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgc 6507008 Score = 42.1 bits (21), Expect = 5.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 947 tatgctaatgctgatgcccgagtttcccttgaa 979 ||||| ||||||||||| |||||||| |||||| Sbjct: 6506494 tatgcaaatgctgatgctcgagtttctcttgaa 6506462
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 527 ggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactaggctat 586 ||||||||||| || || || | |||||||| |||||| |||| ||||| | || ||| Sbjct: 23773 ggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttat 23714 Query: 587 tccttctttgacagtgataagctggttga 615 || |||||||||||||||||| ||||||| Sbjct: 23713 tcattctttgacagtgataagttggttga 23685 Score = 44.1 bits (22), Expect = 1.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 701 agggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgc 750 ||||| ||||| ||||||| || ||| |||||||||| ||||||||||| Sbjct: 23433 agggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgc 23384 Score = 42.1 bits (21), Expect = 5.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 947 tatgctaatgctgatgcccgagtttcccttgaa 979 ||||| ||||||||||| |||||||| |||||| Sbjct: 22870 tatgcaaatgctgatgctcgagtttctcttgaa 22838
>gb|AY104682.1| Zea mays PCO108968 mRNA sequence Length = 1305 Score = 52.0 bits (26), Expect = 0.005 Identities = 68/82 (82%) Strand = Plus / Plus Query: 522 tagttggaatgatgggttctggcaaaactacagttgggaagataatagctgaagtactag 581 |||| ||||||||||||||||| |||| ||| || |||||||| || ||||||| | | Sbjct: 483 tagtgggaatgatgggttctggaaaaagtactgtggggaagatcatgtctgaagtcttgg 542 Query: 582 gctattccttctttgacagtga 603 | ||||| |||||||| ||||| Sbjct: 543 gttattcgttctttgatagtga 564
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 48.1 bits (24), Expect = 0.084 Identities = 27/28 (96%) Strand = Plus / Plus Query: 184 gggagaggagatggacgccggcgtgggt 211 ||||||| |||||||||||||||||||| Sbjct: 773698 gggagagcagatggacgccggcgtgggt 773725
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 48.1 bits (24), Expect = 0.084 Identities = 27/28 (96%) Strand = Plus / Plus Query: 337 gcgttccggcgcggggaggaggagcgcc 364 ||||||||||||| |||||||||||||| Sbjct: 588064 gcgttccggcgcgcggaggaggagcgcc 588091
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.33 Identities = 53/63 (84%) Strand = Plus / Plus Query: 701 agggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtgatacga 760 ||||||||||| |||||| | || ||| ||||||| || ||||||||||| || || ||| Sbjct: 31511670 agggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgttatccga 31511729 Query: 761 cca 763 ||| Sbjct: 31511730 cca 31511732
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 46.1 bits (23), Expect = 0.33 Identities = 53/63 (84%) Strand = Plus / Plus Query: 701 agggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtgatacga 760 ||||||||||| |||||| | || ||| ||||||| || ||||||||||| || || ||| Sbjct: 147067 agggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgttatccga 147126 Query: 761 cca 763 ||| Sbjct: 147127 cca 147129
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 46.1 bits (23), Expect = 0.33 Identities = 53/63 (84%) Strand = Plus / Plus Query: 701 agggatttgtcatcaatgcaccggttaattgttgcaacaggaggtggtgcggtgatacga 760 ||||||||||| |||||| | || ||| ||||||| || ||||||||||| || || ||| Sbjct: 2230 agggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgttatccga 2289 Query: 761 cca 763 ||| Sbjct: 2290 cca 2292
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 527 ggaatgatgggttctggcaaaa 548 |||||||||||||||||||||| Sbjct: 1445572 ggaatgatgggttctggcaaaa 1445593
>emb|AL606510.10| Human DNA sequence from clone RP11-435D11 on chromosome 10, complete sequence Length = 99961 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1001 cataatgatgtgaatgtactta 1022 |||||||||||||||||||||| Sbjct: 54957 cataatgatgtgaatgtactta 54978
>gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165833 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 934 aagaatggactcatatgctaat 955 |||||||||||||||||||||| Sbjct: 156314 aagaatggactcatatgctaat 156293
>ref|XM_001224391.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_05178) mRNA, complete cds Length = 1233 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 cctccgccgcgggcgccgcca 91 ||||||||||||||||||||| Sbjct: 599 cctccgccgcgggcgccgcca 619
>gb|AC147210.3| Xenopus tropicalis clone CH216-56A14, complete sequence Length = 150312 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1083 ccatggtcagaaactgaccag 1103 ||||||||||||||||||||| Sbjct: 56024 ccatggtcagaaactgaccag 56004
>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome Length = 7750108 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 gtactcaagcaaaaagcagag 484 ||||||||||||||||||||| Sbjct: 5200555 gtactcaagcaaaaagcagag 5200535
>gb|AC148598.2| Xenopus tropicalis clone CH216-154B13, complete sequence Length = 174091 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1083 ccatggtcagaaactgaccag 1103 ||||||||||||||||||||| Sbjct: 121992 ccatggtcagaaactgaccag 121972
>gb|DQ529280.1| Aeromonas salmonicida bacteriophage 25, complete genome Length = 161475 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 936 gaatggactcatatgctaatg 956 ||||||||||||||||||||| Sbjct: 128799 gaatggactcatatgctaatg 128779
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1212 aaacttgggcttttacacaag 1232 ||||||||||||||||||||| Sbjct: 160071 aaacttgggcttttacacaag 160091
>gb|AC122225.4| Mus musculus BAC clone RP23-131E21 from 9, complete sequence Length = 209737 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 688 gagtgaggtgctcagggatttgtca 712 |||||||||||| |||||||||||| Sbjct: 21150 gagtgaggtgctgagggatttgtca 21174
>gb|AC122822.3| Mus musculus BAC clone RP23-202A13 from 9, complete sequence Length = 191414 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 688 gagtgaggtgctcagggatttgtca 712 |||||||||||| |||||||||||| Sbjct: 76772 gagtgaggtgctgagggatttgtca 76796
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1051 gctaaagatggagagctttct 1071 ||||||||||||||||||||| Sbjct: 1055337 gctaaagatggagagctttct 1055357
>ref|XM_678983.1| PREDICTED: Danio rerio similar to KIAA0377 splice variant 4 (LOC556230), mRNA Length = 699 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1193 ccagagctgtgacagaggaaa 1213 ||||||||||||||||||||| Sbjct: 603 ccagagctgtgacagaggaaa 623
>emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in linkage group 15, complete sequence Length = 156236 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1193 ccagagctgtgacagaggaaa 1213 ||||||||||||||||||||| Sbjct: 14691 ccagagctgtgacagaggaaa 14711
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 ccggcgcggggaggaggagcgccgatccg 370 ||||||||||||||||||| |||||||| Sbjct: 910732 ccggcgcggggaggaggagaaccgatccg 910760
>emb|AL606703.6| Zebrafish DNA sequence from clone BUSM1-181A10 in linkage group 14 Contains the 5' part of the robo2 gene for roundabout homolog 2 and two CpG islands, complete sequence Length = 76265 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1193 ccagagctgtgacagaggaaa 1213 ||||||||||||||||||||| Sbjct: 34802 ccagagctgtgacagaggaaa 34782
>gb|AY694557.1| Uncultured low G+C Gram-positive bacterium clone JAB SHC 141 16S ribosomal RNA gene, partial sequence Length = 848 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 tctcccaccttcctttacctcttct 28 |||||| |||||||||||||||||| Sbjct: 271 tctccctccttcctttacctcttct 247
>emb|AL845498.9| Mouse DNA sequence from clone RP23-222D20 on chromosome 2, complete sequence Length = 154935 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 gtctcccaccttcctttacctcttc 27 ||||||||||||| ||||||||||| Sbjct: 3677 gtctcccaccttcttttacctcttc 3653 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 232,633,154 Number of extensions: 12172074 Number of successful extensions: 250635 Number of sequences better than 10.0: 46 Number of HSP's gapped: 250615 Number of HSP's successfully gapped: 106 Length of query: 1368 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1345 Effective length of database: 18,503,978,556 Effective search space: 24887851157820 Effective search space used: 24887851157820 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
