ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4n04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828693.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA034B20, full insert sequence Length = 644 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 53 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 109 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 110 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 169 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 170 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 229 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 230 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 289 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 290 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 349 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 350 atgattttgggtttgaagattatcttaact 379 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 412 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 471 Query: 1176 ttcaattgatt 1186 ||||||||||| Sbjct: 472 ttcaattgatt 482
>dbj|AK240888.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065029H23, full insert sequence Length = 2872 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 735 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 679 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 678 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 619 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 618 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 559 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 558 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 499 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 498 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 439 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 438 atgattttgggtttgaagattatcttaact 409 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 376 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 317 Query: 1176 ttcaattgatt 1186 ||||||||||| Sbjct: 316 ttcaattgatt 306
>ref|NM_001054951.1| Oryza sativa (japonica cultivar-group) Os02g0800500 (Os02g0800500) mRNA, partial cds Length = 3230 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 45 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 101 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 102 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 161 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 162 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 221 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 222 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 281 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 282 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 341 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 342 atgattttgggtttgaagattatcttaact 371
>ref|NM_001054948.1| Oryza sativa (japonica cultivar-group) Os02g0800100 (Os02g0800100) mRNA, complete cds Length = 777 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 64 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 120 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 121 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 180 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 181 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 240 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 241 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 300 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 301 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 360 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 361 atgattttgggtttgaagattatcttaact 390 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 423 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 482 Query: 1176 ttcaattgatt 1186 ||||||||||| Sbjct: 483 ttcaattgatt 493
>dbj|AK072342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N08, full insert sequence Length = 3232 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 47 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 103 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 104 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 163 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 164 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 223 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 224 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 283 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 284 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 343 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 344 atgattttgggtttgaagattatcttaact 373
>dbj|AK072332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L20, full insert sequence Length = 4792 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 33 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 89 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 90 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 149 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 150 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 209 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 210 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 269 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 270 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 329 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 330 atgattttgggtttgaagattatcttaact 359
>dbj|AK069830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M09, full insert sequence Length = 778 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 65 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 121 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 122 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 181 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | |||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 182 gcgtccacaaggatgccaagttctgggcggacaagaagaggttcggcgcggaagccatct 241 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 242 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 301 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 302 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 361 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 362 atgattttgggtttgaagattatcttaact 391 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 |||||||||||||| |||||||||||||| || |||| |||||||| | ||||| ||| Sbjct: 424 gacatgcaccacggaatggaggttcgcctcggtttgtcaaagggacctgtttgccctagt 483 Query: 1176 ttcaattgatt 1186 ||||||||||| Sbjct: 484 ttcaattgatt 494
>dbj|AK067815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118P06, full insert sequence Length = 3020 Score = 333 bits (168), Expect = 9e-88 Identities = 290/330 (87%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 32 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 88 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 89 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 148 Query: 148 ccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatct 207 | ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||| Sbjct: 149 gcgtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatct 208 Query: 208 acggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaa 267 ||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 209 acggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaa 268 Query: 268 ggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttgg 327 ||||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| | Sbjct: 269 ggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttag 328 Query: 328 atgattttggatttgaagattaccttaact 357 |||||||||| ||||||||||| ||||||| Sbjct: 329 atgattttgggtttgaagattatcttaact 358
>ref|NM_001054952.1| Oryza sativa (japonica cultivar-group) Os02g0801300 (Os02g0801300) mRNA, complete cds Length = 1176 Score = 329 bits (166), Expect = 1e-86 Identities = 288/328 (87%), Gaps = 3/328 (0%) Strand = Plus / Plus Query: 30 atggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctccgc 89 |||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||||| Sbjct: 1 atggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgc 57 Query: 90 ttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccgcc 149 ||||||||||||||||||||| || |||||||||||| ||||||| |||||||| | Sbjct: 58 ttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagc 117 Query: 150 atccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctac 209 ||||||||||| |||||||||||| |||||||||| |||||| | || ||||||||| Sbjct: 118 gtccacaaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctac 177 Query: 210 ggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaagg 269 ||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||| Sbjct: 178 ggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaagg 237 Query: 270 cccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttggat 329 ||||| ||||||||||| ||||||||||| |||||||||||| |||| |||||||| ||| Sbjct: 238 ccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttagat 297 Query: 330 gattttggatttgaagattaccttaact 357 |||||||| ||||||||||| ||||||| Sbjct: 298 gattttgggtttgaagattatcttaact 325
>ref|NM_001069377.1| Oryza sativa (japonica cultivar-group) Os09g0314900 (Os09g0314900) mRNA, complete cds Length = 843 Score = 327 bits (165), Expect = 6e-86 Identities = 264/297 (88%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 21 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 80 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 172 ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||||| Sbjct: 81 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggaggccaagttctg 140 Query: 173 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 232 || || ||||||| ||||||| | || ||||||||||||||||| |||||||||||||| Sbjct: 141 ggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaa 200 Query: 233 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 292 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 201 ggatctcgatgcccaaatcctctccaagttccaaaggccccctggtgcattgccatcatc 260 Query: 293 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagatta 349 |||||| ||||| ||||| |||| ||||||||||||||||| || ||||||||||| Sbjct: 261 tatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagatta 317 Score = 46.1 bits (23), Expect = 0.32 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttg 1146 |||||||||||||| |||||||||| ||||| Sbjct: 358 gacatgcaccacggaatggaggttctccttg 388
>ref|NM_001057097.1| Oryza sativa (japonica cultivar-group) Os03g0583700 (Os03g0583700) mRNA, complete cds Length = 846 Score = 327 bits (165), Expect = 6e-86 Identities = 264/297 (88%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 80 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 172 ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||||| Sbjct: 81 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaaggaggccaagttctg 140 Query: 173 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 232 || || ||||||| ||||||| | || ||||||||||||||||| |||||||||||||| Sbjct: 141 ggcggataagaagaggttcggggcggaagccatctacggatccgctttcaacatccgcaa 200 Query: 233 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 292 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 201 ggatctcgatgcccaaatcctctccaagttccaaaggccccctggtgcattgccatcatc 260 Query: 293 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagatta 349 |||||| ||||| ||||| |||| ||||||||||||||||| || ||||||||||| Sbjct: 261 tatgctaggatacgaggcgctgactggttccttggatgatttcgggtttgaagatta 317
>gb|AY105712.1| Zea mays PCO130616 mRNA sequence Length = 981 Score = 278 bits (140), Expect = 5e-71 Identities = 263/304 (86%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 ||||| |||| || |||||||||||||| |||||||||||| |||| | | ||||| Sbjct: 105 gaagagggagatcagcgagacccacgacaccctccgcttcggcctcaatgccggcgtcaa 164 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaaggagtccaagttctg 172 | ||||||||||||| ||||||| ||||| || |||||| |||| |||||||||| Sbjct: 165 ggccgacctcgcgccgccgcacccgctccagtccagcatccaatcggaggccaagttctg 224 Query: 173 ggacgacaagaagaagttcgggaccgaggccatctacggatccgccttcaacatccgcaa 232 || |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 225 ggcggacaagaagaagtttgggacagaggccatctacggatccgccttgaacatccgcaa 284 Query: 233 ggatctcgacgcccagatcctctccaggttccaaaggcccccaggtgcattgccatcatc 292 ||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 285 ggatctcgatgcccaaatcctctcaaggttccaaaggccccctggtgctttgccatcatc 344 Query: 293 tatgctgggatatgaggcaatgacaggttccttggatgattttggatttgaagattacct 352 | |||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||| || Sbjct: 345 tctgcttggatatgaggcactgacaggttccctagatgattttggttttgaagattatct 404 Query: 353 taac 356 |||| Sbjct: 405 taac 408 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| || Sbjct: 442 gacatgcaccacggaatggaggttcgccttggtttgtccaagggacctatctgccctagc 501 Query: 1176 ttcaattga 1184 |||| |||| Sbjct: 502 ttcagttga 510
>gb|BT016426.1| Zea mays clone Contig259 mRNA sequence Length = 643 Score = 250 bits (126), Expect = 1e-62 Identities = 234/270 (86%) Strand = Plus / Plus Query: 87 cgcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggcc 146 ||||||||| |||||| | ||||| | ||||||||| ||| ||||||| ||||| | Sbjct: 117 cgcttcggcatcaacgccggcgtcaaagccgacctcgccccgccgcacccgctccagtct 176 Query: 147 gccatccacaaggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatc 206 ||||||| |||| |||||||||||| |||||||||||||||||||| || ||||| Sbjct: 177 accatccaatcggagaccaagttctgggcggacaagaagaagttcgggacagatgccata 236 Query: 207 tacggatccgccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaa 266 || ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 237 tatggatccgccctcaacatccgcaaggatctcgatgcccaaatcctctccaggttccaa 296 Query: 267 aggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttg 326 |||||||| ||||| ||||| |||||| |||| ||||| |||||| ||||||||||| || Sbjct: 297 aggccccctggtgctttgccgtcatctctgcttggatacgaggcactgacaggttccctg 356 Query: 327 gatgattttggatttgaagattaccttaac 356 ||||||||||||||||||||||| |||||| Sbjct: 357 gatgattttggatttgaagattatcttaac 386 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 ||||||||||| || ||||||||||||||||| ||||||||||||| ||||| || || Sbjct: 420 gacatgcaccatggaatggaggttcgccttggtttgtccaagggacctatctgtcctagc 479 Query: 1176 ttcaattga 1184 ||||||||| Sbjct: 480 ttcaattga 488
>gb|AY104566.1| Zea mays PCO130617 mRNA sequence Length = 1029 Score = 246 bits (124), Expect = 2e-61 Identities = 181/200 (90%) Strand = Plus / Plus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||||||||||||| || ||||| || ||||||| Sbjct: 476 aggagaccaagttctgggcggacaagaagaagttcgggacagatgccatatatggatccg 535 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctccaggttccaaaggcccccag 276 || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 536 ccctcaacatccgcaaggatctcgatgcccaaatcctctccaggttccaaaggccccctg 595 Query: 277 gtgcattgccatcatctatgctgggatatgaggcaatgacaggttccttggatgattttg 336 |||| ||||| |||||| |||| ||||| |||||| ||||||||||| |||||||||||| Sbjct: 596 gtgctttgccgtcatctctgcttggatacgaggcactgacaggttccctggatgattttg 655 Query: 337 gatttgaagattaccttaac 356 ||||||||||||| |||||| Sbjct: 656 gatttgaagattatcttaac 675 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1116 gacatgcaccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagt 1175 ||||||||||| || ||||||||||||||||| ||||||||||||| ||||| || || Sbjct: 709 gacatgcaccatggaatggaggttcgccttggtttgtccaagggacctatctgtcctagc 768 Query: 1176 ttcaattga 1184 ||||||||| Sbjct: 769 ttcaattga 777
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34095511 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34095452 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 34095451 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 34095392 Query: 376 t 376 | Sbjct: 34095391 t 34095391 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34118698 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34118639 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 34118638 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 34118579 Query: 376 t 376 | Sbjct: 34118578 t 34118578 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34143250 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34143191 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 34143190 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 34143131 Query: 376 t 376 | Sbjct: 34143130 t 34143130 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 34172967 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 34172908 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 34172907 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 34172848 Query: 376 t 376 | Sbjct: 34172847 t 34172847 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34119552 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34119493 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34119492 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34119451 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34144104 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34144045 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34144044 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34144003 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 34173821 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 34173762 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 34173761 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 34173720 Score = 111 bits (56), Expect = 6e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 163 ccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccgccttca 222 |||||||||||| |||||||||| |||||| | || |||||||||||||||||||||| Sbjct: 34096372 ccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttca 34096313 Query: 223 acatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||| || ||||| |||||||||| Sbjct: 34096312 acatccgcaaggatcttgatgcccaaatcctctcca 34096277 Score = 107 bits (54), Expect = 1e-19 Identities = 113/132 (85%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 34096586 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 34096530 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34096529 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34096470 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 34096469 gcgtccacaagg 34096458 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34119776 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34119720 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34119719 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34119660 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 34119659 gcgtccacaagg 34119648 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34144325 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34144269 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34144268 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34144209 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 34144208 gcgtccacaagg 34144197 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 34174042 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 34173986 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 34173985 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 34173926 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 34173925 gcgtccacaagg 34173914 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||| ||| | || | || |||||||||||||| ||||||| Sbjct: 34094723 ttgcagtgccccaagattctgaaagcttccgtgctcccgacatgcaccacggaatggagg 34094664 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 ||||||| || |||| |||||||| | ||||| |||||||||||||| Sbjct: 34094663 ttcgcctcggtttgtcaaagggacctgtttgccctagtttcaattgatt 34094615 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cctcgcgccggcgcaccccgt 139 ||||||||||||||||||||| Sbjct: 33056861 cctcgcgccggcgcaccccgt 33056841
>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0032L17 Length = 165808 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 23025 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 22966 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 22965 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 22906 Query: 376 t 376 | Sbjct: 22905 t 22905 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 46212 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 46153 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 46152 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 46093 Query: 376 t 376 | Sbjct: 46092 t 46092 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 70764 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 70705 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 70704 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 70645 Query: 376 t 376 | Sbjct: 70644 t 70644 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 100481 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 100422 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 100421 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 100362 Query: 376 t 376 | Sbjct: 100361 t 100361 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 47066 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 47007 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 47006 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 46965 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 71618 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 71559 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 71558 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 71517 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 101335 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 101276 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 101275 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 101234 Score = 111 bits (56), Expect = 6e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 163 ccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccgccttca 222 |||||||||||| |||||||||| |||||| | || |||||||||||||||||||||| Sbjct: 23886 ccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttca 23827 Query: 223 acatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||| || ||||| |||||||||| Sbjct: 23826 acatccgcaaggatcttgatgcccaaatcctctcca 23791 Score = 107 bits (54), Expect = 1e-19 Identities = 113/132 (85%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| |||| Sbjct: 24100 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcctcc 24044 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 24043 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 23984 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 23983 gcgtccacaagg 23972 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 47290 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 47234 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 47233 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 47174 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 47173 gcgtccacaagg 47162 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 71839 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 71783 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 71782 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 71723 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 71722 gcgtccacaagg 71711 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 101556 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 101500 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 101499 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 101440 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 101439 gcgtccacaagg 101428 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||| ||| | || | || |||||||||||||| ||||||| Sbjct: 22237 ttgcagtgccccaagattctgaaagcttccgtgctcccgacatgcaccacggaatggagg 22178 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 ||||||| || |||| |||||||| | ||||| |||||||||||||| Sbjct: 22177 ttcgcctcggtttgtcaaagggacctgtttgccctagtttcaattgatt 22129
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 256 ccaggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatga 315 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 8240 ccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactga 8181 Query: 316 caggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtcctt 375 | |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 8180 ctggttccttagatgattttgggtttgaagattatcttaactgtaaggattgctgtcctt 8121 Query: 376 t 376 | Sbjct: 8120 t 8120 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| |||||||||| |||||| | || |||||||||||||||| Sbjct: 9094 aggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccg 9035 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 |||||||||||||||||||||| || ||||| |||||||||| Sbjct: 9034 ccttcaacatccgcaaggatcttgatgcccaaatcctctcca 8993 Score = 99.6 bits (50), Expect = 2e-17 Identities = 112/132 (84%), Gaps = 3/132 (2%) Strand = Plus / Minus Query: 28 cgatggcgagcggcggattcatggcgaagaaggagctcggcgagacccacgacgtgctcc 87 |||||||||||||||| | ||| |||||||||| |||||| || ||||||||| ||| Sbjct: 9315 cgatggcgagcggcgg---cgtggtgaagaaggagatcggcgggaaccacgacgtcgtcc 9259 Query: 88 gcttcggcgtcaacgacagcgtccgcggcgacctcgcgccggcgcaccccgtccaggccg 147 ||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| Sbjct: 9258 gcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggcca 9199 Query: 148 ccatccacaagg 159 | ||||||||| Sbjct: 9198 gcgtccacaagg 9187
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 135 bits (68), Expect = 4e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 257 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 316 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 156140 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 156199 Query: 317 aggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtccttt 376 ||||||||||||||||| || ||||||||||| || |||||||||| ||| ||||||| Sbjct: 156200 tggttccttggatgatttcgggtttgaagattatctcaactgtaaggcttgttgtccttt 156259 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 154263 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 154322 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 154323 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 154364 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 154068 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 154127 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 159 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 154128 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 154174 Score = 97.6 bits (49), Expect = 1e-16 Identities = 94/109 (86%) Strand = Plus / Plus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||||||| | | | || |||||||||||||| ||||||| Sbjct: 156896 ttgcagtgccccaagattctgacagcttccatgctccagacatgcaccacggaatggagg 156955 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 |||||||||| |||| |||||||| || ||||| |||||||||||||| Sbjct: 156956 ttcgccttggtttgtcaaagggaccgatttgccctagtttcaattgatt 157004
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 135 bits (68), Expect = 4e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 257 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 316 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 8584325 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 8584384 Query: 317 aggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtccttt 376 ||||||||||||||||| || ||||||||||| || |||||||||| ||| ||||||| Sbjct: 8584385 tggttccttggatgatttcgggtttgaagattatctcaactgtaaggcttgttgtccttt 8584444 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 8582450 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 8582509 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 8582510 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 8582551 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 8582255 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 8582314 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 159 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 8582315 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 8582361 Score = 89.7 bits (45), Expect = 2e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||||||| | | | || |||||||||||||| ||||||| Sbjct: 8585083 ttgcagtgccccaagattctgacagcttccatgctccagacatgcaccacggaatggagg 8585142 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 ||| |||||| |||| |||||||| || ||||| |||||||||||||| Sbjct: 8585143 ttctccttggtttgtcaaagggaccgatttgccctagtttcaattgatt 8585191 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cctcgcgccggcgcaccccgt 139 ||||||||||||||||||||| Sbjct: 15959863 cctcgcgccggcgcaccccgt 15959883
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 135 bits (68), Expect = 4e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 257 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 316 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 21293254 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 21293313 Query: 317 aggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtccttt 376 ||||||||||||||||| || ||||||||||| || |||||||||| ||| ||||||| Sbjct: 21293314 tggttccttggatgatttcgggtttgaagattatctcaactgtaaggcttgttgtccttt 21293373 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 21291377 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 21291436 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 21291437 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 21291478 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct: 21291182 gaagaaggaggtcggcgagaaccacgacgtgctcctcttcggcgtcaacaacagcgtcaa 21291241 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 159 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 21291242 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 21291288 Score = 97.6 bits (49), Expect = 1e-16 Identities = 94/109 (86%) Strand = Plus / Plus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||||||| | | | || |||||||||||||| ||||||| Sbjct: 21294010 ttgcagtgccccaagattctgacagcttccatgctccagacatgcaccacggaatggagg 21294069 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 |||||||||| |||| |||||||| || ||||| |||||||||||||| Sbjct: 21294070 ttcgccttggtttgtcaaagggaccgatttgccctagtttcaattgatt 21294118
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 135 bits (68), Expect = 4e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 257 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 316 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 105535 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 105594 Query: 317 aggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtccttt 376 ||||||||||||||||| || ||||||||||| || |||||||||| ||| ||||||| Sbjct: 105595 tggttccttggatgatttcgggtttgaagattatctcaactgtaaggcttgttgtccttt 105654 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 103660 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 103719 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 103720 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 103761 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 103465 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 103524 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 159 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 103525 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 103571 Score = 89.7 bits (45), Expect = 2e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||||||| | | | || |||||||||||||| ||||||| Sbjct: 106293 ttgcagtgccccaagattctgacagcttccatgctccagacatgcaccacggaatggagg 106352 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 ||| |||||| |||| |||||||| || ||||| |||||||||||||| Sbjct: 106353 ttctccttggtttgtcaaagggaccgatttgccctagtttcaattgatt 106401
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 135 bits (68), Expect = 4e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 257 caggttccaaaggcccccaggtgcattgccatcatctatgctgggatatgaggcaatgac 316 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 14121 caggttccaaaggccccctggtgcattgccatcatctatgctaggatacgaggcgctgac 14180 Query: 317 aggttccttggatgattttggatttgaagattaccttaactgtaaggattgccgtccttt 376 ||||||||||||||||| || ||||||||||| || |||||||||| ||| ||||||| Sbjct: 14181 tggttccttggatgatttcgggtttgaagattatctcaactgtaaggcttgttgtccttt 14240 Score = 115 bits (58), Expect = 4e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 157 aggagtccaagttctgggacgacaagaagaagttcgggaccgaggccatctacggatccg 216 ||||| |||||||||||| || ||||||| ||||||| | || |||||||||||||||| Sbjct: 12246 aggaggccaagttctgggcggataagaagaggttcggggcggaagccatctacggatccg 12305 Query: 217 ccttcaacatccgcaaggatctcgacgcccagatcctctcca 258 | ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 12306 ctttcaacatccgcaaggatctcgatgcccaaatcctctcca 12347 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 53 gaagaaggagctcggcgagacccacgacgtgctccgcttcggcgtcaacgacagcgtccg 112 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 12051 gaagaaggaggtcggcgagaaccacgacgtgctccgcttcggcttcaacaacagcgtcaa 12110 Query: 113 cggcgacctcgcgccggcgcaccccgtccaggccgccatccacaagg 159 ||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 12111 gggcgacctcgcgccgcagcacccgatccaggccaccgtccacaagg 12157 Score = 89.7 bits (45), Expect = 2e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 1078 ttgcagtgccccaagactctgacagcctgcgcgtaccggacatgcaccacgggatggagg 1137 |||||||||||||||| ||||||||| | | | || |||||||||||||| ||||||| Sbjct: 14879 ttgcagtgccccaagattctgacagcttccatgctccagacatgcaccacggaatggagg 14938 Query: 1138 ttcgccttggcctgtccaagggacccatctgccccagtttcaattgatt 1186 ||| |||||| |||| |||||||| || ||||| |||||||||||||| Sbjct: 14939 ttctccttggtttgtcaaagggaccgatttgccctagtttcaattgatt 14987
>dbj|AK099813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K24, full insert sequence Length = 2648 Score = 75.8 bits (38), Expect = 4e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 300 ggatatgaggcaatgacaggttccttggatgattttggatttgaagattaccttaact 357 |||||||||||| |||| |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 4 ggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaact 61
>gb|AC046195.9| Homo sapiens chromosome 8, clone RP11-238K6, complete sequence Length = 161507 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 582 ctagaacagtggaacacacaagt 604 ||||||||||||||||||||||| Sbjct: 73969 ctagaacagtggaacacacaagt 73991
>emb|AJ851434.1| Gallus gallus partial mRNA for hypothetical protein, clone 2l15 Length = 2918 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgattttggatttgaagatta 349 ||||||||||||||||||||||| Sbjct: 257 gatgattttggatttgaagatta 279
>ref|NM_105394.2| Arabidopsis thaliana unknown protein (AT1G67250) mRNA, complete cds Length = 677 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 449 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 506
>gb|BT011933.1| Arabidopsis thaliana At1g67250 mRNA sequence Length = 423 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 361 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 418
>emb|AL109953.24|HSDJ746H2 Human DNA sequence from clone RP4-746H2 on chromosome 20 Contains the MRPS11P1 gene for mitochondrial ribosmal protein S11 pseudogene 1, complete sequence Length = 148859 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1001 taaccctttccttgtgttatttccat 1026 |||||||||||||||| ||||||||| Sbjct: 140413 taaccctttccttgtggtatttccat 140438
>emb|AL035468.3|HS424E5 Human DNA sequence from clone RP3-424E5 on chromosome 6q13-14.3, complete sequence Length = 93805 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 625 ttttattaaaatggttctgttgctaatttt 654 ||||||||||||||||||||| ||||||| Sbjct: 55839 ttttattaaaatggttctgtttttaatttt 55868
>gb|AY086781.1| Arabidopsis thaliana clone 27632 mRNA, complete sequence Length = 604 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 432 caccacgggatggaagttcgtcttggcatctcgaagggaccgatttacccaagtttca 489
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 catccgcaaggatctcgacgcc 245 |||||||||||||||||||||| Sbjct: 5004005 catccgcaaggatctcgacgcc 5003984
>gb|AY044313.1| Arabidopsis thaliana Unknown protein (F1N21.15) mRNA, complete cds Length = 474 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 364 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 421
>gb|AC092828.16| Homo sapiens 12 BAC RP11-282K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127836 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1258 atggatttgtgaaacatgagaa 1279 |||||||||||||||||||||| Sbjct: 101904 atggatttgtgaaacatgagaa 101925
>gb|BT003679.1| Arabidopsis thaliana At1g67250 mRNA, complete cds Length = 426 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 364 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 421
>dbj|AK117205.1| Arabidopsis thaliana At1g67250 mRNA for unknown protein, complete cds, clone: RAFL16-75-L12 Length = 583 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 444 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 501
>gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana BAC F1N21 from chromosome I, complete sequence Length = 114738 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Minus Query: 1122 caccacgggatggaggttcgccttggcctgtccaagggacccatctgccccagtttca 1179 |||||||||||||| ||||| |||||| | || |||||||| || | ||| ||||||| Sbjct: 26741 caccacgggatggaagttcgtcttggcatctcaaagggaccgatttacccaagtttca 26684
>ref|NM_001073416.1| Oryza sativa (japonica cultivar-group) Os12g0514900 (Os12g0514900) mRNA, complete cds Length = 996 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 agcggcgatggcgagcggcgg 43 ||||||||||||||||||||| Sbjct: 58 agcggcgatggcgagcggcgg 78
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cgcggcgacctcgcgccggcg 131 ||||||||||||||||||||| Sbjct: 3557152 cgcggcgacctcgcgccggcg 3557172
>gb|AY020123.1| Oryza sativa microsatellite MRG2448 containing (CT)X19, genomic sequence Length = 238 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 agcggcgatggcgagcggcgg 43 ||||||||||||||||||||| Sbjct: 96 agcggcgatggcgagcggcgg 76
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 706040 ttattacagctatatttacaa 706020
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 714033 ttattacagctatatttacaa 714013
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 625633 ttattacagctatatttacaa 625613
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 692563 ttattacagctatatttacaa 692543
>gb|AC114912.3| Homo sapiens BAC clone RP11-552M14 from 4, complete sequence Length = 95468 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1012 ttgtgttatttccatttgctagtag 1036 ||||||||||||| ||||||||||| Sbjct: 63604 ttgtgttatttccttttgctagtag 63580
>gb|AC104183.2| Homo sapiens chromosome 3 clone RP11-180N14, complete sequence Length = 169709 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1005 cctttccttgtgttatttcca 1025 ||||||||||||||||||||| Sbjct: 89957 cctttccttgtgttatttcca 89977
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 agcggcgatggcgagcggcgg 43 ||||||||||||||||||||| Sbjct: 19988942 agcggcgatggcgagcggcgg 19988962
>gb|AF452622.1|AF452622 Staphylococcus aureus strain 8325-4 manganese-dependent transcriptional repressor (mntR), complete cds; Mn(II) ABC-type uptake transporter operon, complete sequence Length = 5603 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 3301 ttattacagctatatttacaa 3321
>gb|AC010238.6| Homo sapiens chromosome 5 clone CTC-349C3, complete sequence Length = 167022 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 tggtggggttttgatcctaga 586 ||||||||||||||||||||| Sbjct: 11442 tggtggggttttgatcctaga 11462
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 903 tgttcatgaatggcagaaagt 923 ||||||||||||||||||||| Sbjct: 70024 tgttcatgaatggcagaaagt 70004
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 675644 ttattacagctatatttacaa 675624
>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208992 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 920 aagtgcttgccaccatgagtt 940 ||||||||||||||||||||| Sbjct: 95759 aagtgcttgccaccatgagtt 95779
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 677145 ttattacagctatatttacaa 677125
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cctcgcgccggcgcaccccgt 139 ||||||||||||||||||||| Sbjct: 102801 cctcgcgccggcgcaccccgt 102781
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 681791 ttattacagctatatttacaa 681771
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 5.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 85 tccgcttcggcgtcaacgacagcgtccgcggcg 117 |||| ||||||| | |||||||||||||||||| Sbjct: 6430760 tccggttcggcgacgacgacagcgtccgcggcg 6430728
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 903 tgttcatgaatggcagaaagt 923 ||||||||||||||||||||| Sbjct: 64491 tgttcatgaatggcagaaagt 64471
>dbj|AP005565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1238_G07 Length = 78304 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cctcgcgccggcgcaccccgt 139 ||||||||||||||||||||| Sbjct: 30576 cctcgcgccggcgcaccccgt 30596
>gb|AY167928.1| Staphylococcus aureus 8325 sirR-sitABC operon, complete sequence Length = 4637 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 2610 ttattacagctatatttacaa 2630
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b, complete sequence Length = 45450 Score = 42.1 bits (21), Expect = 5.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1115 ggacatgcaccacgggatggaggttcgccttgg 1147 ||||||||| || |||||||| ||||||||||| Sbjct: 33298 ggacatgcatcatgggatggaagttcgccttgg 33330
>gb|AC012089.13|AC012089 Homo sapiens 3 BAC RP11-758L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150429 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1005 cctttccttgtgttatttcca 1025 ||||||||||||||||||||| Sbjct: 127685 cctttccttgtgttatttcca 127665
>dbj|AK101966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H08, full insert sequence Length = 997 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 agcggcgatggcgagcggcgg 43 ||||||||||||||||||||| Sbjct: 59 agcggcgatggcgagcggcgg 79
>gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, complete sequence Length = 173253 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggagagagaggaaaagctcag 21 ||||||||||||||||||||| Sbjct: 66145 ggagagagaggaaaagctcag 66165
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 688842 ttattacagctatatttacaa 688822
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 agcggcgatggcgagcggcgg 43 ||||||||||||||||||||| Sbjct: 38318 agcggcgatggcgagcggcgg 38298
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 725 ttattacagctatatttacaa 745 ||||||||||||||||||||| Sbjct: 647120 ttattacagctatatttacaa 647100 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 250,358,545 Number of extensions: 13390603 Number of successful extensions: 278165 Number of sequences better than 10.0: 65 Number of HSP's gapped: 278144 Number of HSP's successfully gapped: 121 Length of query: 1311 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1288 Effective length of database: 18,503,978,556 Effective search space: 23833124380128 Effective search space used: 23833124380128 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
