ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf4m07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome 46 0.54
2gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.54
3ref|XM_311103.2| Anopheles gambiae str. PEST ENSANGP00000017357 ... 46 0.54
4gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome 44 2.1
5ref|NM_001051158.1| Oryza sativa (japonica cultivar-group) Os01g... 44 2.1
6gb|CP000431.1| Rhodococcus sp. RHA1, complete genome 44 2.1
7gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome 44 2.1
8ref|XM_365535.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 2.1
9gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 44 2.1
10gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 2.1
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.1
12dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic D... 44 2.1
13emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 2.1
14dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.1
15gb|U33150.1|PAU33150 Pseudomonas aeruginosa unidentified ferric ... 44 2.1
16dbj|AB039884.1| Myxococcus xanthus accB, accA genes for acetyl-C... 44 2.1
17ref|XM_839967.1| Trypanosoma brucei TREU927 chromosome 5 42 8.5
18emb|CR855212.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 8.5
19gb|CP000468.1| Escherichia coli APEC O1, complete genome 42 8.5
20ref|NM_001059761.1| Oryza sativa (japonica cultivar-group) Os04g... 42 8.5
21gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete ... 42 8.5
22emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 42 8.5
23gb|CP000266.1| Shigella flexneri 5 str. 8401, complete genome 42 8.5
24gb|CP000247.1| Escherichia coli 536, complete genome 42 8.5
25gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 42 8.5
26gb|CP000243.1| Escherichia coli UTI89, complete genome 42 8.5
27emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 8.5
28gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 42 8.5
29gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 8.5
30gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 8.5
31gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E2... 42 8.5
32gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7,... 42 8.5
33gb|AF246135.1| Dendragapus falcipennis AGC1-like sequence 42 8.5
34gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 8.5
35ref|XM_547200.2| PREDICTED: Canis familiaris similar to tryptase... 42 8.5
36dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 8.5
37ref|XM_819926.1| Trypanosoma brucei TREU927 clone RPCI93-6E7 hyp... 42 8.5
38gb|U00096.2| Escherichia coli K12 MG1655, complete genome 42 8.5
39dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 8.5
40gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 8.5
41gb|AE014075.1| Escherichia coli CFT073, complete genome 42 8.5
42gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 8.5
43emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 8.5
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 8.5
45gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 8.5
46gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 42 8.5
47gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosom... 42 8.5
48gb|AF186234.2|AF186234 Zea mays iron-phytosiderophore transporte... 42 8.5
49dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 8.5
50dbj|BA000007.2| Escherichia coli O157:H7 str. Sakai DNA, complet... 42 8.5
51gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromoso... 42 8.5
52ref|XM_567180.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 8.5
53gb|AC151357.2| Xenopus tropicalis clone ISB-60L11, complete sequ... 42 8.5
54emb|X53315.1|ECARCB E. coli arcB gene for ArcB membrane protein 42 8.5
55ref|NM_210473.1| Eremothecium gossypii AER262Cp (AER262C), mRNA 42 8.5
56gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro... 42 8.5
57gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 8.5
58emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 8.5
59gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 8.5
60gb|CP000036.1| Shigella boydii Sb227, complete genome 42 8.5
61gb|M24664.1|DOGMCTRPA Dog mast cell tryptase mRNA 42 8.5
62gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 8.5 
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome
          Length = 9139763
 Score = 46.1 bits (23), Expect = 0.54
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 42     gcgctcatcgccctggtgctggc 64
              |||||||||||||||||||||||
Sbjct: 792994 gcgctcatcgccctggtgctggc 792972



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1216  ccttcgccttcgtcttcaccatcacc 1241
             ||||||||||| ||||||||||||||
Sbjct: 91911 ccttcgccttcttcttcaccatcacc 91886
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 1498    cgctcgccgcgcagcagatcggc 1520
               |||||||||||||||||||||||
Sbjct: 1055005 cgctcgccgcgcagcagatcggc 1055027
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>ref|XM_311103.2| Anopheles gambiae str. PEST ENSANGP00000017357 (ENSANGG00000014868),
            partial mRNA
          Length = 1185

 Score = 46.1 bits (23), Expect = 0.54
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 651  tacatcatcaacaagccggagaaggag 677
            |||||||||| ||||||||||||||||
Sbjct: 1114 tacatcatcaccaagccggagaaggag 1140
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>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
          Length = 6537648

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 2032    gcatcaccagctacaccgccag 2053
               ||||||||||||||||||||||
Sbjct: 3548566 gcatcaccagctacaccgccag 3548587
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>ref|NM_001051158.1| Oryza sativa (japonica cultivar-group) Os01g0817400 (Os01g0817400)
            mRNA, complete cds
          Length = 2628

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1182 gtgctcttcgtgctcttctgct 1203
            ||||||||||||||||||||||
Sbjct: 775  gtgctcttcgtgctcttctgct 796
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>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 715    ccttcctcgccggtctcgtcgc 736
              ||||||||||||||||||||||
Sbjct: 275229 ccttcctcgccggtctcgtcgc 275250
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>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
          Length = 6264404

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 2032    gcatcaccagctacaccgccag 2053
               ||||||||||||||||||||||
Sbjct: 2083765 gcatcaccagctacaccgccag 2083744
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>ref|XM_365535.1| Magnaporthe grisea 70-15 hypothetical protein (MG02237.4) partial
            mRNA
          Length = 4359

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1732 cgctcttcttggtcgtcttctt 1753
            ||||||||||||||||||||||
Sbjct: 3859 cgctcttcttggtcgtcttctt 3838



 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1735 tcttcttggtcgtcttcttgg 1755
            |||||||||||||||||||||
Sbjct: 3841 tcttcttggtcgtcttcttgg 3821
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 1533    ctgctgttctgcttcgtcacgg 1554
               ||||||||||||||||||||||
Sbjct: 3184624 ctgctgttctgcttcgtcacgg 3184645
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 161     caccctcggcctgccacagttcaacccgct 190
               ||||||||||||||| ||| ||||||||||
Sbjct: 3681628 caccctcggcctgccccagctcaacccgct 3681599
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1182     gtgctcttcgtgctcttctgct 1203
                ||||||||||||||||||||||
Sbjct: 34782669 gtgctcttcgtgctcttctgct 34782690
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>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1148D12
          Length = 132060

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1182  gtgctcttcgtgctcttctgct 1203
             ||||||||||||||||||||||
Sbjct: 97909 gtgctcttcgtgctcttctgct 97930
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 52      ccctggtgctggcgctggccct 73
               ||||||||||||||||||||||
Sbjct: 1815823 ccctggtgctggcgctggccct 1815844



 Score = 42.1 bits (21), Expect = 8.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 1500    ctcgccgcgcagcagatcggcactc 1524
               ||||||| |||||||||||||||||
Sbjct: 2914118 ctcgccgtgcagcagatcggcactc 2914142
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454H12
          Length = 161004

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1182  gtgctcttcgtgctcttctgct 1203
             ||||||||||||||||||||||
Sbjct: 41841 gtgctcttcgtgctcttctgct 41862
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>gb|U33150.1|PAU33150 Pseudomonas aeruginosa unidentified ferric siderophore receptor
            (ufrA) gene, complete cds
          Length = 2935

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2032 gcatcaccagctacaccgccag 2053
            ||||||||||||||||||||||
Sbjct: 552  gcatcaccagctacaccgccag 573
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>dbj|AB039884.1| Myxococcus xanthus accB, accA genes for acetyl-CoA carboxylase
            carboxyltransferase, acetyl-CoA carboxylase biotin
            carboxylase subunit, complete cds
          Length = 3526

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1216 ccttcgccttcgtcttcaccatcacc 1241
            ||||||||||| ||||||||||||||
Sbjct: 628  ccttcgccttcttcttcaccatcacc 603
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>ref|XM_839967.1| Trypanosoma brucei TREU927 chromosome 5
          Length = 2235

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1213 tcgccttcgccttcgtcttca 1233
            |||||||||||||||||||||
Sbjct: 1712 tcgccttcgccttcgtcttca 1692
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>emb|CR855212.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0311C03, complete
             sequence
          Length = 82144

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1735  tcttcttggtcgtcttcttgg 1755
             |||||||||||||||||||||
Sbjct: 13407 tcttcttggtcgtcttcttgg 13427
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>gb|CP000468.1| Escherichia coli APEC O1, complete genome
          Length = 5082025

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3645539 tgctggcgctggccctcgtcg 3645519
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>ref|NM_001059761.1| Oryza sativa (japonica cultivar-group) Os04g0501000 (Os04g0501000)
            mRNA, complete cds
          Length = 579

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1735 tcttcttggtcgtcttcttgg 1755
            |||||||||||||||||||||
Sbjct: 226  tcttcttggtcgtcttcttgg 206
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>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence
          Length = 2646969

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 2065   gcgcctcgtccgtacgcgccaccgg 2089
              |||||||| ||||||||||||||||
Sbjct: 520126 gcgcctcgcccgtacgcgccaccgg 520150
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>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1
          Length = 4052032

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 59     gctggcgctggccctcgtcgatgcg 83
              ||||||||||||||| |||||||||
Sbjct: 835525 gctggcgctggccctggtcgatgcg 835501
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>gb|CP000266.1| Shigella flexneri 5 str. 8401, complete genome
          Length = 4574284

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3308773 tgctggcgctggccctcgtcg 3308753
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>gb|CP000247.1| Escherichia coli 536, complete genome
          Length = 4938920

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3463256 tgctggcgctggccctcgtcg 3463236
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>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1804  agaacaagtggcgcgcctccc 1824
             |||||||||||||||||||||
Sbjct: 32417 agaacaagtggcgcgcctccc 32397
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3572627 tgctggcgctggccctcgtcg 3572607
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
              sequence
          Length = 148644

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1735   tcttcttggtcgtcttcttgg 1755
              |||||||||||||||||||||
Sbjct: 111982 tcttcttggtcgtcttcttgg 112002
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3345116 tgctggcgctggccctcgtcg 3345096
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 54      ctggtgctggcgctggccctc 74
               |||||||||||||||||||||
Sbjct: 1401919 ctggtgctggcgctggccctc 1401899
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 1118    gaccttctttgtcttcgccaccatgcttt 1146
               ||||||||| ||||||||||| |||||||
Sbjct: 2202730 gaccttcttcgtcttcgccacgatgcttt 2202702
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>gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E22, complete sequence
          Length = 141628

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1213  tcgccttcgccttcgtcttca 1233
             |||||||||||||||||||||
Sbjct: 29286 tcgccttcgccttcgtcttca 29266
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>gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7, complete sequence
          Length = 170328

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1213   tcgccttcgccttcgtcttca 1233
              |||||||||||||||||||||
Sbjct: 145274 tcgccttcgccttcgtcttca 145254
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>gb|AF246135.1| Dendragapus falcipennis AGC1-like sequence
          Length = 700

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 394 aaggtgtgaaggcgagcctca 414
           |||||||||||||||||||||
Sbjct: 521 aaggtgtgaaggcgagcctca 541
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1213    tcgccttcgccttcgtcttca 1233
               |||||||||||||||||||||
Sbjct: 1529199 tcgccttcgccttcgtcttca 1529219
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>ref|XM_547200.2| PREDICTED: Canis familiaris similar to tryptase alpha/beta 1
            precursor (LOC490080), mRNA
          Length = 2919

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   ctggtgctggcgctggccctc 74
            |||||||||||||||||||||
Sbjct: 2104 ctggtgctggcgctggccctc 2124
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3352804 tgctggcgctggccctcgtcg 3352784
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>ref|XM_819926.1| Trypanosoma brucei TREU927 clone RPCI93-6E7 hypothetical protein
            (Tb927.5.3900) partial mRNA
          Length = 2235

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1213 tcgccttcgccttcgtcttca 1233
            |||||||||||||||||||||
Sbjct: 1712 tcgccttcgccttcgtcttca 1692
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>gb|U00096.2| Escherichia coli K12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3350971 tgctggcgctggccctcgtcg 3350951
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 51      gccctggtgctggcgctggcc 71
               |||||||||||||||||||||
Sbjct: 3004076 gccctggtgctggcgctggcc 3004056
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 1702    cgggccgcttcaacaagcacatccg 1726
               |||||||||||||||||||| ||||
Sbjct: 2916406 cgggccgcttcaacaagcacttccg 2916382
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3786441 tgctggcgctggccctcgtcg 3786421
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1782  cgcttcaccatcaccaccgac 1802
             |||||||||||||||||||||
Sbjct: 22367 cgcttcaccatcaccaccgac 22387
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
              complete sequence
          Length = 173171

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1735   tcttcttggtcgtcttcttgg 1755
              |||||||||||||||||||||
Sbjct: 104508 tcttcttggtcgtcttcttgg 104528
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 1735     tcttcttggtcgtcttcttgg 1755
                |||||||||||||||||||||
Sbjct: 24983923 tcttcttggtcgtcttcttgg 24983943
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete
               sequence
          Length = 1519138

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 81      gcgcagctggatgatgtcacc 101
               |||||||||||||||||||||
Sbjct: 1117643 gcgcagctggatgatgtcacc 1117663
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3336233 tgctggcgctggccctcgtcg 3336213
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>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete
             sequence
          Length = 186366

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 477   tggatggacaaggagtgcttg 497
             |||||||||||||||||||||
Sbjct: 13549 tggatggacaaggagtgcttg 13569
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>gb|AF186234.2|AF186234 Zea mays iron-phytosiderophore transporter protein yellow stripe 1
            (ys1) mRNA, complete cds
          Length = 2494

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1213 tcgccttcgccttcgtcttca 1233
            |||||||||||||||||||||
Sbjct: 1925 tcgccttcgccttcgtcttca 1945
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1428    cgctcgcgctggttcgagatc 1448
               |||||||||||||||||||||
Sbjct: 7474483 cgctcgcgctggttcgagatc 7474463
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>dbj|BA000007.2| Escherichia coli O157:H7 str. Sakai DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 4095302 tgctggcgctggccctcgtcg 4095282
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>gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromosome unknown, complete
             sequence
          Length = 220538

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 477   tggatggacaaggagtgcttg 497
             |||||||||||||||||||||
Sbjct: 61743 tggatggacaaggagtgcttg 61723
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>ref|XM_567180.1| Cryptococcus neoformans var. neoformans JEC21 cadmium ion transporter
            (CNA08000) partial mRNA
          Length = 4524

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1118 gaccttctttgtcttcgccaccatgcttt 1146
            ||||||||| ||||||||||| |||||||
Sbjct: 4371 gaccttcttcgtcttcgccacgatgcttt 4399
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>gb|AC151357.2| Xenopus tropicalis clone ISB-60L11, complete sequence
          Length = 108609

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 482   ggacaaggagtgcttgaatgt 502
             |||||||||||||||||||||
Sbjct: 13994 ggacaaggagtgcttgaatgt 14014
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>emb|X53315.1|ECARCB E. coli arcB gene for ArcB membrane protein
          Length = 2534

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 58  tgctggcgctggccctcgtcg 78
           |||||||||||||||||||||
Sbjct: 100 tgctggcgctggccctcgtcg 120
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>ref|NM_210473.1| Eremothecium gossypii AER262Cp (AER262C), mRNA
          Length = 519

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 81  gcgcagctggatgatgtcacc 101
           |||||||||||||||||||||
Sbjct: 390 gcgcagctggatgatgtcacc 370
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>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes
          Length = 372438

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     tgctggcgctggccctcgtcg 78
              |||||||||||||||||||||
Sbjct: 133694 tgctggcgctggccctcgtcg 133674
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 4162519 tgctggcgctggccctcgtcg 4162499
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 2038    ccagctacaccgccagctcca 2058
               |||||||||||||||||||||
Sbjct: 2050722 ccagctacaccgccagctcca 2050702
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3144198 tgctggcgctggccctcgtcg 3144178
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3182188 tgctggcgctggccctcgtcg 3182208
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>gb|M24664.1|DOGMCTRPA Dog mast cell tryptase mRNA
          Length = 995

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 54 ctggtgctggcgctggccctc 74
          |||||||||||||||||||||
Sbjct: 26 ctggtgctggcgctggccctc 46
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 8.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      tgctggcgctggccctcgtcg 78
               |||||||||||||||||||||
Sbjct: 3532023 tgctggcgctggccctcgtcg 3532003


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 279,932,508
Number of extensions: 14106577
Number of successful extensions: 79255
Number of sequences better than 10.0: 62
Number of HSP's gapped: 79255
Number of HSP's successfully gapped: 65
Length of query: 2211
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2188
Effective length of database: 18,503,978,556
Effective search space: 40486705080528
Effective search space used: 40486705080528
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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