ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf4l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Os07g0115700:Os07g0115700 27 2.5
2Os02g0791700:Os02g0791700 27 3.3
3AK060756:Os03g0330300 26 7.4
4AK119626:Os05g0481900 25 9.6
5AK106744:Os05g0481900 25 9.6 
>Os07g0115700:Os07g0115700 |
          Length = 2820
 Score = 27.3 bits (59), Expect = 2.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 9    NELDILESSVLSLQRGSSDVEPVWLGVYF 95
            +++ + + S+ SL R SSDV P WL V +
Sbjct: 1108 SDVHLADFSLASLVRHSSDVAPWWLSVVY 1136
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>Os02g0791700:Os02g0791700 |
          Length = 559

 Score = 26.9 bits (58), Expect = 3.3
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 27  ESSVLSLQRGSSDVEPVWLGVYFETDGTVFSPVNSNFFLSQKKKKKN 167
           ESS L LQ   SD  P      F      FS  +S+ FLS K+  K+
Sbjct: 313 ESSELDLQEKDSDAIPTSSFSSFHERKFSFSSCSSDGFLSSKESSKH 359
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>AK060756:Os03g0330300 |
          Length = 1073

 Score = 25.8 bits (55), Expect = 7.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 118 EKTVPSVSKYTPNHTGSTSELPLCNDKTELSKMSSS 11
           EKT+ S S+   N+TGS SE      + E    S+S
Sbjct: 422 EKTIDSTSQSKSNNTGSDSEKDGAETQAEPGSASAS 457
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>AK119626:Os05g0481900 |
          Length = 437

 Score = 25.4 bits (54), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 145 ERKKLELTGEKTVPSVSKYTPNHTGSTSE 59
           ER KL +    T+ SV+KY  +  G+T E
Sbjct: 204 ERDKLPIKAPNTMSSVAKYPSSAHGNTHE 232
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>AK106744:Os05g0481900 |
          Length = 437

 Score = 25.4 bits (54), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 145 ERKKLELTGEKTVPSVSKYTPNHTGSTSE 59
           ER KL +    T+ SV+KY  +  G+T E
Sbjct: 204 ERDKLPIKAPNTMSSVAKYPSSAHGNTHE 232


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 3,857,726
Number of extensions: 67466
Number of successful extensions: 133
Number of sequences better than 10.0: 5
Number of HSP's gapped: 133
Number of HSP's successfully gapped: 5
Length of query: 55
Length of database: 15,399,855
Length adjustment: 28
Effective length of query: 27
Effective length of database: 14,278,707
Effective search space: 385525089
Effective search space used: 385525089
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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