Clone Information

BLAST Search Result

Clone Name	FLbaf4l24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os08g36630:12008.t03402:unspliced-genomic carbonic anhyd...	33	0.20
2	LOC_Os09g16440:12009.t01431:unspliced-genomic transposon pro...	31	0.42
3	LOC_Os12g05320:12012.t00420:unspliced-genomic expressed protein	30	0.98
4	LOC_Os01g13330:12001.t01195:unspliced-genomic hypothetical p...	30	0.98
5	LOC_Os12g30280:12012.t02734:unspliced-genomic retrotransposo...	29	1.7
6	LOC_Os07g02490:12007.t00140:unspliced-genomic retrotransposo...	29	1.7
7	LOC_Os02g45974:12002.t005555:unspliced-genomic expressed pro...	29	1.9
8	LOC_Os06g09540:12006.t00833:unspliced-genomic phosphoinositi...	29	2.6
9	LOC_Os06g23290:12006.t02141:unspliced-genomic phosphatidylin...	29	3.5
10	LOC_Os03g59550:12003.t05201:unspliced-genomic RNA-binding pr...	29	3.5
11	LOC_Os02g06010:12002.t00499:unspliced-genomic expressed protein	29	3.5
12	LOC_Os01g28580:12001.t06797:unspliced-genomic expressed protein	29	3.5
13	LOC_Os07g32480:12007.t02932:unspliced-genomic mitotic checkp...	28	4.8
14	LOC_Os01g70480:12001.t06348:unspliced-genomic hypothetical p...	28	4.8
15	LOC_Os01g15010:12001.t01355:unspliced-genomic GTP-binding pr...	28	4.8
16	LOC_Os06g14100:12006.t01285:unspliced-genomic transposon pro...	23	6.0
17	LOC_Os07g48470:12007.t04479:unspliced-genomic retrotransposo...	28	6.1
18	LOC_Os05g51420:12005.t04569:unspliced-genomic hypersensitive...	28	6.1
19	LOC_Os05g51410:12005.t04570:unspliced-genomic expressed protein	28	6.1
20	LOC_Os05g23500:12005.t02007:unspliced-genomic retrotransposo...	28	6.1
21	LOC_Os04g02000:12004.t00097:unspliced-genomic Zn-finger, Ran...	28	6.1
22	LOC_Os01g42234:12001.t03742:unspliced-genomic amino-acid per...	28	6.1
23	LOC_Os08g39810:12008.t03712:unspliced-genomic retrotransposo...	24	6.1
24	LOC_Os04g39570:12004.t03526:unspliced-genomic OsWRKY35v1 - S...	28	6.5
25	LOC_Os11g39480:12011.t03490:unspliced-genomic protein GOS9, ...	28	6.6
26	LOC_Os07g38070:12007.t03475:unspliced-genomic nodulation rec...	28	6.6
27	LOC_Os05g11460:12005.t00978:unspliced-genomic hypothetical p...	28	6.6
28	LOC_Os03g61120:12003.t05345:unspliced-genomic anthranilate s...	28	6.6
29	LOC_Os01g34080:12001.t02971:unspliced-genomic armadillo/beta...	28	6.6
30	LOC_Os10g21950:12010.t01677:unspliced-genomic retrotransposo...	25	7.3
31	LOC_Os09g15340:12009.t01323:unspliced-genomic nudix hydrolas...	27	8.3
32	LOC_Os09g12790:12009.t01069:unspliced-genomic calcium-activa...	27	8.3
33	LOC_Os02g54900:12002.t05068:unspliced-genomic STE20/SPS1-rel...	27	8.3
34	LOC_Os07g25360:12007.t02232:unspliced-genomic retrotransposo...	27	8.8
35	LOC_Os03g21270:12003.t01882:unspliced-genomic expressed protein	27	8.8
36	LOC_Os12g15110:12012.t01368:unspliced-genomic retrotransposo...	27	9.1
37	LOC_Os09g09360:12009.t00728:unspliced-genomic expressed protein	27	9.1
38	LOC_Os06g13030:12006.t01178:unspliced-genomic LIM domain con...	27	9.1
39	LOC_Os03g54000:12003.t04715:unspliced-genomic oligopeptide t...	27	9.1
40	LOC_Os03g14260:12003.t01217:unspliced-genomic brefeldin A-in...	27	9.1
41	LOC_Os02g35190:12002.t03157:unspliced-genomic chloride chann...	27	9.1
42	LOC_Os01g20120:12001.t01800:unspliced-genomic expressed protein	27	9.1
43	LOC_Os01g19450:12001.t01735:unspliced-genomic ATP-citrate sy...	27	9.1
44	LOC_Os01g16880:12001.t01537:unspliced-genomic expressed protein	27	9.1
45	LOC_Os01g06460:12001.t00529:unspliced-genomic SAT5, putative...	27	9.1
46	LOC_Os08g12680:12008.t01147:unspliced-genomic zinc finger do...	25	9.4

>LOC_Os08g36630:12008.t03402:unspliced-genomic carbonic anhydrase precursor, putative, expressed|
          Length = 2466
 Score = 32.7 bits (65), Expect = 0.20
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3 / -3

                                         
Query: 159  FFFFGKERNWN*LGKKQCHQFQSTHPTTQ 73
            +++  KERNWN*+     H    T PT +
Sbjct: 1477 YYYIKKERNWN*IRNMTRHAVHQTQPTAK 1391

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>LOC_Os09g16440:12009.t01431:unspliced-genomic transposon protein, putative, Mutator sub-class|
          Length = 6369

 Score = 31.5 bits (65), Expect = 0.42
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2 / -2

                                                   
Query: 136  KLELTGEKTVPSVSKYTPNHTGSTSELPLCNDKTELSKM 20
            ++ LTG  T  S+S + P+H+ ST ++   +    LS +
Sbjct: 4688 RISLTGSNTSSSLSSWPPSHSSSTGDMSSNSSSKSLSSL 4572

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>LOC_Os12g05320:12012.t00420:unspliced-genomic expressed protein|
          Length = 5442

 Score = 30.4 bits (60), Expect = 0.98
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3 / +2

                                          
Query: 96   QSTHPTTQALRLNFLSATIKLNFLKCLAHY 7
            QST+  T AL+L  LSAT+ L+ + C+ ++
Sbjct: 5303 QSTYAHTLALQLR*LSATMYLSHMCCIGYF 5392

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>LOC_Os01g13330:12001.t01195:unspliced-genomic hypothetical protein|
          Length = 1069

 Score = 30.4 bits (60), Expect = 0.98
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1 / +1

                                      
Query: 167 IFFFFFLGKKEIGIDWGKNSAISFKVH 87
           IFFFF  G   +G  W K + ++FK H
Sbjct: 655 IFFFFGGGGGVVGNTWDKKALLAFKRH 735

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>LOC_Os12g30280:12012.t02734:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 789

 Score = 29.4 bits (59), Expect = 1.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3 / -1

                                          
Query: 54  GSSDVEPVWLGVYFETDGTVFSPVNSNFFLS 146
           GS+  E VW  + F  D + F PV   F  S
Sbjct: 369 GSAACEVVWFDIVFSVDVSYFDPVEPMFHFS 277

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>LOC_Os07g02490:12007.t00140:unspliced-genomic retrotransposon protein, putative, LINE subclass|
          Length = 6589

 Score = 29.4 bits (59), Expect = 1.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3 / +2

                                         
Query: 9    NELDILESSVLSLQRGSSDVEPVWLGVYF 95
            +++ + + S+ SL R SSDV P WL V +
Sbjct: 3380 SDVHLADFSLASLVRHSSDVAPWWLSVVY 3466

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>LOC_Os02g45974:12002.t005555:unspliced-genomic expressed protein|
          Length = 2554

 Score = 29.5 bits (58), Expect = 1.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3 / -2

                                                
Query: 108  CHQFQSTHPTTQALRLNFLSATIKLNFLKCLAHYLV 1
            CH FQS H    +  L+F+S+T+    +    +YL+
Sbjct: 2517 CHAFQSLHMPADS*LLHFVSSTVIKGLIWTYWYYLL 2410

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>LOC_Os06g09540:12006.t00833:unspliced-genomic phosphoinositide 5-phosphatase, putative, expressed|
          Length = 10278

 Score = 28.9 bits (59), Expect = 2.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2 / -1

                                            
Query: 106  PSVSKYTPNHTGSTSELPLCNDKTELSKMSSS 11
            P V  ++ + T S S  PLC    ELS M SS
Sbjct: 2706 PPVDLWSSSRTFSRSRYPLCEYTVELSSMLSS 2611

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>LOC_Os06g23290:12006.t02141:unspliced-genomic phosphatidylinositol 3- and 4-kinase family protein, expressed|
          Length = 2967

 Score = 28.6 bits (56), Expect = 3.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1 / +1

                           
Query: 167 IFFFFFLGKKEIGIDW 120
           +FFFFFLG+    +DW
Sbjct: 211 LFFFFFLGRLAWDLDW 258

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>LOC_Os03g59550:12003.t05201:unspliced-genomic RNA-binding protein 8A, putative, expressed|
          Length = 4840

 Score = 28.6 bits (56), Expect = 3.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3 / +2

                                  
Query: 165 FFFFFFGKERNWN*LGKKQCHQF 97
           +F+FFFG+E  +  LG+  C  F
Sbjct: 329 YFYFFFGRELEFELLGRVLCAIF 397

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>LOC_Os02g06010:12002.t00499:unspliced-genomic expressed protein|
          Length = 4354

 Score = 28.6 bits (56), Expect = 3.5
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -1 / +2

                         
Query: 167 IFFFFFLGKKEIGI 126
           +FFFFFLG++EI +
Sbjct: 872 LFFFFFLGQREISL 913



 Score = 27.2 bits (53), Expect = 9.1
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = -3 / +3

                      
Query: 165 FFFFFFGKERN 133
           FFFFF+GKER+
Sbjct: 876 FFFFFWGKERS 908

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>LOC_Os01g28580:12001.t06797:unspliced-genomic expressed protein|
          Length = 4086

 Score = 28.6 bits (56), Expect = 3.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3 / +1

                                         
Query: 105  HQFQSTHPTTQALRLNFLSATIKLNFLKC 19
            ++F     T ++L LNF + TI L FL+C
Sbjct: 2980 YEFLKMPCTLESLLLNFRAFTIVLKFLRC 3066

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>LOC_Os07g32480:12007.t02932:unspliced-genomic mitotic checkpoint serine/threonine-protein kinase BUB1, putative,|
            expressed
          Length = 3181

 Score = 28.1 bits (55), Expect = 4.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1 / +2

                                            
Query: 167  IFFFFFLGKKEIGIDWGKNSAISFKVHTQPHR 72
            IFF  F+G   +   +G+NS I+  VH  P +
Sbjct: 1754 IFFVIFVGHLLLLACFGQNSIITHLVHVTPEK 1849

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>LOC_Os01g70480:12001.t06348:unspliced-genomic hypothetical protein|
          Length = 1543

 Score = 28.1 bits (55), Expect = 4.8
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1 / -3

                       
Query: 167 IFFFFFLGKKEI 132
           IFFFFF GK+EI
Sbjct: 851 IFFFFFAGKREI 816

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>LOC_Os01g15010:12001.t01355:unspliced-genomic GTP-binding protein SAR1A, putative, expressed|
          Length = 5195

 Score = 28.1 bits (55), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1 / +2

                                         
Query: 149  LGKKEIGIDWGKNSAISFKVHTQPHRLYV 63
            L +  + +DW K   ISF   T  HRL++
Sbjct: 2825 LAR*SLRVDWLKEKNISFNNSTNLHRLWI 2911

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>LOC_Os06g14100:12006.t01285:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed|
          Length = 5750

 Score = 23.2 bits (45), Expect(2) = 6.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3 / +1

                          
Query: 108  TVFSPVNSNFFLSQ 149
            T+F P+NS FFL +
Sbjct: 5260 TLFKPLNSAFFLQK 5301



 Score = 22.6 bits (43), Expect(2) = 6.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1 / +1

                     
Query: 37   FYRCREEVQ 63
            FYRCR E+Q
Sbjct: 2692 FYRCRMEIQ 2718

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>LOC_Os07g48470:12007.t04479:unspliced-genomic retrotransposon protein, putative, LINE subclass|
          Length = 3807

 Score = 27.6 bits (55), Expect = 6.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3 / +3

                                        
Query: 9   NELDILESSVLSLQRGSSDVEPVWLGVYF 95
           +++ + + S+ +L R SSDV P WL + +
Sbjct: 531 SDVHLADFSLTALVRHSSDVAPWWLSIVY 617

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>LOC_Os05g51420:12005.t04569:unspliced-genomic hypersensitive-induced response protein, putative, expressed|
          Length = 5450

 Score = 27.6 bits (55), Expect = 6.1
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3 / -1

                                         
Query: 78   WLGVYFETDGTVFSPVNSNFFLSQKKKKK 164
            W       DG  F P NS  F  +K KKK
Sbjct: 1349 WTTRRINKDGAAFGPRNSRGFSQEKGKKK 1263

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>LOC_Os05g51410:12005.t04570:unspliced-genomic expressed protein|
          Length = 3992

 Score = 27.6 bits (55), Expect = 6.1
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3 / +1

                                         
Query: 78   WLGVYFETDGTVFSPVNSNFFLSQKKKKK 164
            W       DG  F P NS  F  +K KKK
Sbjct: 2446 WTTRRINKDGAAFGPRNSRGFSQEKGKKK 2532

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>LOC_Os05g23500:12005.t02007:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4040

 Score = 27.6 bits (55), Expect = 6.1
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3 / -1

                                           
Query: 54   GSSDVEPVWLGVYFETDGTVFSPVNSNFFLS 146
            GS   E VW  V F  D + F P+ S F  S
Sbjct: 2942 GSVLCEVVWFDVVFSVDMSNFDPIESAFQFS 2850

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>LOC_Os04g02000:12004.t00097:unspliced-genomic Zn-finger, RanBP-type, containing protein, expressed|
          Length = 5396

 Score = 27.6 bits (55), Expect = 6.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3 / -2

                             
Query: 93   FETDGTVFSPVNSNFFL 143
            FE + TVF+P   NFFL
Sbjct: 2329 FEIENTVFNPSEDNFFL 2279

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>LOC_Os01g42234:12001.t03742:unspliced-genomic amino-acid permease C584.13, putative, expressed|
          Length = 9734

 Score = 27.6 bits (55), Expect = 6.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3 / +1

                                    
Query: 87   VYFETDGTVFSPVNSNFFLSQKKK 158
            VY   D T+F P++  +  SQKKK
Sbjct: 5539 VYLLVDMTIFYPISKTYADSQKKK 5610

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>LOC_Os08g39810:12008.t03712:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 8109

 Score = 24.1 bits (47), Expect(2) = 6.1
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3 / -3

                                  
Query: 87   VYFETDGTVFSPVNSNFFLSQK 152
            +Y+ T+G  +S ++ +FF SQ+
Sbjct: 5656 LYYGTEGVHYSIISFHFFKSQR 5591



 Score = 22.1 bits (42), Expect(2) = 6.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1 / -2

                       
Query: 58   VQT*SLCGWVC 90
            VQ  S+C WVC
Sbjct: 5936 VQRISVCAWVC 5904

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>LOC_Os04g39570:12004.t03526:unspliced-genomic OsWRKY35v1 - Superfamily of rice TFs having WRKY and zinc finger|
            domains, expressed
          Length = 7352

 Score = 27.6 bits (56), Expect = 6.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2 / +3

                                          
Query: 91   YTPNHTGSTSELPLCNDKTELSKMSSSLFS 2
            ++P H G T+ LPL      +S  SSSL S
Sbjct: 2268 HSPIHIGQTAPLPLSLSSLSVSSPSSSLSS 2357

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>LOC_Os11g39480:12011.t03490:unspliced-genomic protein GOS9, putative|
          Length = 666

 Score = 27.6 bits (54), Expect = 6.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1 / +2

                             
Query: 122 WGKNSAISFKVHTQPHRL 69
           WG N  I + + T PHRL
Sbjct: 137 WGGNGGIEYVMETVPHRL 190

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>LOC_Os07g38070:12007.t03475:unspliced-genomic nodulation receptor kinase precursor, putative, expressed|
          Length = 4579

 Score = 27.6 bits (54), Expect = 6.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3 / +1

                               
Query: 117  KKQCHQFQSTHPTTQALRL 61
            KK C   +STHP+TQ   L
Sbjct: 1537 KKDCSSTRSTHPSTQVCSL 1593

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>LOC_Os05g11460:12005.t00978:unspliced-genomic hypothetical protein|
          Length = 2175

 Score = 27.6 bits (54), Expect = 6.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3 / -1

                                             
Query: 102 QFQSTHPTTQALRLNFLSATIKLNFLKCLAHYLV 1
           +F   H  +  L  NFLS+ +  NFL+    YL+
Sbjct: 609 RFWRKHSNSSNLLKNFLSSNLLKNFLRDYLSYLI 508

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>LOC_Os03g61120:12003.t05345:unspliced-genomic anthranilate synthase component I-1, chloroplast precursor, putative,|
            expressed
          Length = 5680

 Score = 27.6 bits (54), Expect = 6.6
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3 / -1

                                
Query: 162  FFFFFGKERNWN*LGKKQCH 103
            FFF   K   WN*L  KQ H
Sbjct: 3772 FFFCMQKTEEWN*LRTKQMH 3713

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>LOC_Os01g34080:12001.t02971:unspliced-genomic armadillo/beta-catenin-like repeat family protein, expressed|
          Length = 11207

 Score = 27.6 bits (54), Expect = 6.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1 / +2

                            
Query: 167  IFFFFFLGKKEIGIDW 120
            +FFFFFL +KEI   W
Sbjct: 3962 LFFFFFLRRKEIRNRW 4009

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>LOC_Os10g21950:12010.t01677:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 11353

 Score = 24.9 bits (48), Expect(2) = 7.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1 / -2

                      
Query: 164  FFFFFLGKKE 135
            FFFFF G+KE
Sbjct: 8097 FFFFFFGRKE 8068



 Score = 21.7 bits (41), Expect(2) = 7.3
 Identities = 8/30 (26%), Positives = 12/30 (40%)
 Frame = -3 / -1

                                          
Query: 117  KKQCHQFQSTHPTTQALRLNFLSATIKLNF 28
            K+QCH F  T         +F++      F
Sbjct: 2605 KRQCHNFDETSGVRFLFLFSFVNEDTTFTF 2516

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>LOC_Os09g15340:12009.t01323:unspliced-genomic nudix hydrolase 24, chloroplast precursor, putative, expressed|
          Length = 4092

 Score = 27.2 bits (54), Expect = 8.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3 / -2

                                             
Query: 69   EPVWLGVYFETDGTVFSPVNSNFFLSQKKKKKN 167
            + +WL V+     T    + +++ LSQ+KKKKN
Sbjct: 3104 DSIWLKVFKGNQCTNQCKLIASYSLSQQKKKKN 3006

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>LOC_Os09g12790:12009.t01069:unspliced-genomic calcium-activated outward-rectifying potassium channel 6, putative,|
            expressed
          Length = 4123

 Score = 27.2 bits (54), Expect = 8.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3 / +2

                               
Query: 60   SDVEPVWLGVYFETDGTVF 116
            S V   WL  Y ETDGT+F
Sbjct: 2672 SSVSRRWLDKYCETDGTLF 2728

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>LOC_Os02g54900:12002.t05068:unspliced-genomic STE20/SPS1-related proline-alanine-rich protein kinase, putative,|
            expressed
          Length = 6058

 Score = 27.2 bits (54), Expect = 8.3
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3 / +3

                                                        
Query: 27   ESSVLSLQRGSSDVEPVWLGVYFETDGTVFSPVNSNFFLSQKKK 158
            ESS L LQ   SD  P      F      FS  +S+ FLS K++
Sbjct: 3273 ESSELDLQEKDSDAIPTSSFSSFHERKFSFSSCSSDGFLSSKER 3404

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>LOC_Os07g25360:12007.t02232:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 3951

 Score = 27.1 bits (55), Expect = 8.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2 / +3

                                      
Query: 88   TPNHTGSTSELPLCNDKTELSKMSSS 11
            TP+H G T+ LP C  KT  S +++S
Sbjct: 3384 TPSH*GLTTNLPSCLAKTLSSTIAAS 3461

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>LOC_Os03g21270:12003.t01882:unspliced-genomic expressed protein|
          Length = 6555

 Score = 27.1 bits (55), Expect = 8.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2 / +1

                                                
Query: 118  EKTVPSVSKYTPNHTGSTSELPLCNDKTELSKMSSS 11
            EKT+ S S+   N+TGS SE      + E    S+S
Sbjct: 3685 EKTIDSTSQSKSNNTGSDSEKDGAETQAEPGSASAS 3792

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>LOC_Os12g15110:12012.t01368:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2673

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2 / -1

                               
Query: 20   HFRKFSFIVAERKFRRRAC 76
            HF  FSFI+A RK  + +C
Sbjct: 1488 HFSGFSFILAARKLSKVSC 1432

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>LOC_Os09g09360:12009.t00728:unspliced-genomic expressed protein|
          Length = 13083

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3 / +1

                               
Query: 165  FFFFFFGKERNWN*LGKKQ 109
            FFFFFF +E +   + KKQ
Sbjct: 9829 FFFFFFAREEHNQQISKKQ 9885

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>LOC_Os06g13030:12006.t01178:unspliced-genomic LIM domain containing protein, expressed|
          Length = 6214

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3 / +1

                                 
Query: 87   HPTTQALRLNFLSATIKLNFL 25
            HPT   ++ NF++  I LN+L
Sbjct: 2404 HPTMSHMKANFIARPITLNYL 2466

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>LOC_Os03g54000:12003.t04715:unspliced-genomic oligopeptide transporter 3, putative, expressed|
          Length = 4177

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1 / +2

                         
Query: 152  FLGKKEIGIDWGK 114
            ++G K +G+DWGK
Sbjct: 3785 YVGSKNLGLDWGK 3823

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>LOC_Os03g14260:12003.t01217:unspliced-genomic brefeldin A-inhibited guanine nucleotide-exchange protein 2,|
            putative, expressed
          Length = 10643

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3 / +2

                               
Query: 159  FFFFGKERNWN*LGKKQCH 103
            F+ F K R WN L    CH
Sbjct: 1652 FYLFHKYRGWNTLNLNHCH 1708

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>LOC_Os02g35190:12002.t03157:unspliced-genomic chloride channel protein CLC-c, putative, expressed|
          Length = 10669

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3 / -1

                                  
Query: 165  FFFFFFGKERNWN*LGKKQCHQ 100
            FFFFFF   R++  L   QC Q
Sbjct: 4684 FFFFFFSSPRDFLCLASLQCIQ 4619

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>LOC_Os01g20120:12001.t01800:unspliced-genomic expressed protein|
          Length = 4661

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2 / -3

                                   
Query: 23   FRKFSFIVAERKFRRRACVVGCV 91
            F + +FIV++RK R+     GCV
Sbjct: 3189 FSEINFIVSQRKKRKMCTTKGCV 3121

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>LOC_Os01g19450:12001.t01735:unspliced-genomic ATP-citrate synthase subunit 1, putative, expressed|
          Length = 6683

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3 / -1

                                   
Query: 150  FGKERNWN*LGKKQCHQFQSTHP 82
            + K+  W   GK  CHQ    HP
Sbjct: 4856 YDKD*TWRICGKTHCHQSNLCHP 4788

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>LOC_Os01g16880:12001.t01537:unspliced-genomic expressed protein|
          Length = 9000

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3 / +3

                                               
Query: 114  KQCHQFQSTHPTTQALRLNFLSATIKLNFLKCLAH 10
            KQ + + +TH   +    NFLS +I +NF   + H
Sbjct: 6864 KQQYLYVNTHERDEIESYNFLSRSIDINFHMRVMH 6968

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>LOC_Os01g06460:12001.t00529:unspliced-genomic SAT5, putative, expressed|
          Length = 2737

 Score = 27.2 bits (53), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3 / -2

                               
Query: 114  KQCHQFQSTHPTTQALRLN 58
            K  +QF+ TH TTQA + N
Sbjct: 1707 KHNYQFKGTHTTTQAFKKN 1651

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>LOC_Os08g12680:12008.t01147:unspliced-genomic zinc finger domain, LSD1 subclass family protein, expressed|
          Length = 21865

 Score = 25.4 bits (49), Expect(2) = 9.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3 / +2

                               
Query: 57    FLSATIKLNFLKCLAHYL 4
             +L A++ L FLK L HYL
Sbjct: 20249 YLGASMSLLFLKLLYHYL 20302



 Score = 21.7 bits (41), Expect(2) = 9.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1 / +1

                      
Query: 161  FFFFLGKKEI 132
            FFFF G+K I
Sbjct: 8011 FFFFFGRKNI 8040


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 59,502,051
Number of extensions: 749434
Number of successful extensions: 2974
Number of sequences better than 10.0: 46
Length of query: 55
Length of database: 55,613,886
Length adjustment: 42
Effective length of query: 13
Effective length of database: 53,250,210
Effective search space: 692252730
Effective search space used: 692252730
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result