ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4k05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100372:Os07g0111600 | 34 | 0.095 | 2 | Os06g0150600:Os06g0150600 | 30 | 1.8 | 3 | AK066896:Os03g0270200 | 30 | 2.4 | 4 | AK060809:Os03g0270200 | 30 | 2.4 | 5 | AK110428: | 29 | 3.1 | 6 | Os12g0240800:Os12g0240800 | 28 | 6.8 | 7 | Os12g0114200:Os12g0114200 | 28 | 6.8 | 8 | AK120193:Os06g0234100 | 28 | 6.8 | 9 | AK106817:Os02g0289000 | 28 | 6.8 | 10 | AK072543:Os11g0114700 | 28 | 6.8 | 11 | AK070834:Os11g0114700 | 28 | 6.8 | 12 | AK068186:Os04g0675400 | 28 | 6.8 | 13 | AK066583:Os11g0114700 | 28 | 6.8 | 14 | AK065865:Os11g0114700 | 28 | 6.8 | 15 | Os08g0229700:Os08g0229700 | 28 | 8.9 |
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>AK100372:Os07g0111600 | Length = 676 Score = 34.3 bits (77), Expect = 0.095 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 202 GSLQMGGPSRWNSGSHS-SLPVL-YLQCPKTFRKPKWILPIYQYSYTEHSGNP 354 G L + G + W +G+ +LP L L+ P FR +W Y Y + +H GNP Sbjct: 91 GYLFLNGSATWRTGTGELTLPRLPNLRAPYQFRLFRWPAREYSYHHIDHDGNP 143
>Os06g0150600:Os06g0150600 | Length = 642 Score = 30.0 bits (66), Expect = 1.8 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 12/77 (15%) Frame = -1 Query: 220 HPSGENQRGPRVVHQPLVGWCPSQEGPLWPKKDKRKGQLGKPNRGRR-----TPP----- 71 H E +R L G P +W +R+G +P+ RR TPP Sbjct: 553 HAQRERERDDAAASPALAGPQPLPCRQIW----RRRGPARRPSHSRRAAAASTPPLFGER 608 Query: 70 --SKLCWRRTPPSPLAS 26 + W R PP PLA+ Sbjct: 609 APRRWLWGRAPPPPLAA 625
>AK066896:Os03g0270200 | Length = 840 Score = 29.6 bits (65), Expect = 2.4 Identities = 25/81 (30%), Positives = 33/81 (40%) Frame = -1 Query: 262 PGVTNGIQSSTGRGHPSGENQRGPRVVHQPLVGWCPSQEGPLWPKKDKRKGQLGKPNRGR 83 PG S GR P + G R P P + P P +R+ + P+ GR Sbjct: 339 PGRRRPRSPSPGRRRPRSPSP-GRRRPRSP----SPGRRRPRSPSPGRRRPR--SPSPGR 391 Query: 82 RTPPSKLCWRRTPPSPLASAK 20 R P S+ RR PSP S + Sbjct: 392 RRPRSRSPGRRRSPSPRGSPR 412
>AK060809:Os03g0270200 | Length = 580 Score = 29.6 bits (65), Expect = 2.4 Identities = 25/81 (30%), Positives = 33/81 (40%) Frame = -1 Query: 262 PGVTNGIQSSTGRGHPSGENQRGPRVVHQPLVGWCPSQEGPLWPKKDKRKGQLGKPNRGR 83 PG S GR P + G R P P + P P +R+ + P+ GR Sbjct: 79 PGRRRPRSPSPGRRRPRSPSP-GRRRPRSP----SPGRRRPRSPSPGRRRPR--SPSPGR 131 Query: 82 RTPPSKLCWRRTPPSPLASAK 20 R P S+ RR PSP S + Sbjct: 132 RRPRSRSPGRRRSPSPRGSPR 152
>AK110428: | Length = 1060 Score = 29.3 bits (64), Expect = 3.1 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -1 Query: 163 WCPSQEGPLWPKKDKRKGQLGKPNRGRRTPPSKLCWR 53 WCPS +G + +KD G+ G N P +L WR Sbjct: 289 WCPSPDGRCFRRKDYHAGRAGPQNMEVWVPFDRL-WR 324
>Os12g0240800:Os12g0240800 | Length = 449 Score = 28.1 bits (61), Expect = 6.8 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 109 QLGKPNRGRRTPPSKLCWRRTPPSPLASAKP 17 +L +P R RR PS+ WR +PPS + A P Sbjct: 250 RLLRPGRPRRCRPSR--WRSSPPSSRSKAGP 278
>Os12g0114200:Os12g0114200 | Length = 828 Score = 28.1 bits (61), Expect = 6.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 358 DVRDLIRDSEKPSVTNINNSTIPKHHGTLTV 450 D DL +SE + I T P HHG TV Sbjct: 509 DALDLFNESESGTKAGIKYDTNPSHHGMSTV 539
>AK120193:Os06g0234100 | Length = 628 Score = 28.1 bits (61), Expect = 6.8 Identities = 23/79 (29%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Frame = -1 Query: 268 KVPGVTNGIQSSTGRGHPSGENQRGPRVVHQPLVGWCPSQEGPLWPKKDKRKGQLGKPNR 89 K P SS G HPS PL + + P +G+ K R Sbjct: 60 KPPAAAAAAASSDGHHHPSS-----------PLAAAVSASDSPDPASSPAPRGRGRKSRR 108 Query: 88 GRRTPPSKL-CWRRTPPSP 35 GR PPS PPSP Sbjct: 109 GRPEPPSDAGAAPHAPPSP 127
>AK106817:Os02g0289000 | Length = 225 Score = 28.1 bits (61), Expect = 6.8 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -1 Query: 244 IQSSTGRGHPSGENQRGPRVVHQPLVGWCPSQEGPLWPKKDKRKGQLGKPNRGRRTPPSK 65 ++ S R P +RG + + S G L P +R G G+P R RR P + Sbjct: 124 VRGSGRRRRPDRRRRRGG------VPPYAISIRGVLLPPASRRGGAEGRPPRRRRRGPGR 177 Query: 64 L-CWRRTP 44 C RR P Sbjct: 178 RHCRRRVP 185
>AK072543:Os11g0114700 | Length = 721 Score = 28.1 bits (61), Expect = 6.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 358 DVRDLIRDSEKPSVTNINNSTIPKHHGTLTV 450 D DL +SE + I T P HHG TV Sbjct: 482 DALDLFNESESGTKAGIKYGTNPSHHGMSTV 512
>AK070834:Os11g0114700 | Length = 801 Score = 28.1 bits (61), Expect = 6.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 358 DVRDLIRDSEKPSVTNINNSTIPKHHGTLTV 450 D DL +SE + I T P HHG TV Sbjct: 482 DALDLFNESESGTKAGIKYGTNPSHHGMSTV 512
>AK068186:Os04g0675400 | Length = 486 Score = 28.1 bits (61), Expect = 6.8 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 493 TLRSISNSWTWMPILDPTYSTKILSLSL 576 T+RSISN W W P P +T + SL L Sbjct: 288 TIRSISNWWYWQPFRAPA-TTVLASLHL 314
>AK066583:Os11g0114700 | Length = 801 Score = 28.1 bits (61), Expect = 6.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 358 DVRDLIRDSEKPSVTNINNSTIPKHHGTLTV 450 D DL +SE + I T P HHG TV Sbjct: 482 DALDLFNESESGTKAGIKYGTNPSHHGMSTV 512
>AK065865:Os11g0114700 | Length = 799 Score = 28.1 bits (61), Expect = 6.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 358 DVRDLIRDSEKPSVTNINNSTIPKHHGTLTV 450 D DL +SE + I T P HHG TV Sbjct: 480 DALDLFNESESGTKAGIKYGTNPSHHGMSTV 510
>Os08g0229700:Os08g0229700 | Length = 232 Score = 27.7 bits (60), Expect = 8.9 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -1 Query: 238 SSTGRGHPSGENQRGPRVVHQPLVGWCPSQE--GPLWPKKDKRKGQLGKPNRGRRTPPSK 65 ++TG G N G H+ G PS PL D R+ LG+ GR PP + Sbjct: 135 TATGDGDNGDHNGSGDDGDHEGSGGAAPSHPLLSPLPYLSDGRRPPLGRTGAGRTDPPRR 194 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,565,901 Number of extensions: 645368 Number of successful extensions: 1963 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1958 Number of HSP's successfully gapped: 15 Length of query: 253 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 155 Effective length of database: 11,475,837 Effective search space: 1778754735 Effective search space used: 1778754735 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
