ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4k05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 398 bits (201), Expect = e-107 Identities = 484/573 (84%), Gaps = 4/573 (0%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccacccttgggcctctttggttctctccag-atgg 217 |||||||||||||| ||||||||| |||||| ||||||| || ||| |||||| | |||| Sbjct: 32521 caccagcccactaatggctggtgcgccacccatgggcctattaggtcctctcccggatgg 32580 Query: 218 gtggcccctcccggtggaactctggatcccattcgtcactcccggtactttacctgcaat 277 ||||||||||||||| ||| | ||| |||||| |||||||||||||||||||| | ||| Sbjct: 32581 gtggcccctcccggtaaaaccccggaacccatttgtcactcccggtactttaccggtaat 32640 Query: 278 gtccgaaaacctttcggaagccaaaatggatacttcctatatatcagtattcatatacgg 337 || |||| | |||||||||||||| || | |||||||||||| | ||| | | ||| Sbjct: 32641 gtatgaaatcttttcggaagccaaa-tgcaacaatcctatatatcaattttcgtttccgg 32699 Query: 338 agcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctg 397 | || || | ||||||||||||||||||||||||||||| |||| |||||| ||| | Sbjct: 32700 accagtccacagaccctcgtgacgtccgggatctcatccggtactccaaaaaacattcgg 32759 Query: 398 ttaccaacatcaataattcaactataccgaaaca-tcacggaaccttaactgtgcagacc 456 |||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 32760 ttaccaacatcaataattcaactataccgaaaatgtcaccgaaccttaagtgtgcagacc 32819 Query: 457 ttgcgggttcgagagctatgaatacatgaccaaggcactctccggtcaatatccaatagt 516 ||||||||||||| ||||| | |||||||| || |||||||||||||||||| ||||| Sbjct: 32820 ctgcgggttcgagaactatgtagacatgacccagacactctccggtcaatatctaatagc 32879 Query: 517 tggacctggatgcccatattggatcctacttattctacgaagatcttatc-gttgagcct 575 ||||||||| | |||||||||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 32880 aggacctggacgtccatattggatcctacatattctacgaagatcttaccggttgaacct 32939 Query: 576 ctgtgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagtt 635 || ||||||||||| | || | ||||||||||||||||||||||| |||||||| || Sbjct: 32940 ctatgtcaaggattcacacaaccccgtatatcattccctttgtccttcggtatgttactt 32999 Query: 636 gcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatc 695 ||||| ||||||||||| | |||| ||||||||||| ||||||||||| |||| || Sbjct: 33000 gcccgggattcgatcgttggtatcgacatacctattttgatctcgttaccggtaagtctc 33059 Query: 696 tttactcgttctgtaatacaagatcccgtggct 728 || ||| || ||||||||||||||| ||||| Sbjct: 33060 ttaacttgtctcgtaatacaagatcccatggct 33092 Score = 264 bits (133), Expect = 4e-67 Identities = 253/289 (87%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcactc 496 |||||||| |||||||||| ||||||||||||| ||||| | |||||||| || |||| Sbjct: 97588 aaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagactc 97647 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 97648 ctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacga 97707 Query: 557 agatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||||||||| |||| ||| ||| |||||||| | ||||||||||| |||||||||| Sbjct: 97708 agatcttatcgtttgaaccttagtgccaaggattcatataatctcgtatgtcattccctt 97767 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 ||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 97768 tgtccttcggtatgttacttgcccgagattcgatcgtcagtatccacatacctatttcag 97827 Query: 676 tctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 97828 tctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 97876 Score = 248 bits (125), Expect = 2e-62 Identities = 252/289 (87%), Gaps = 4/289 (1%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcactc 496 |||||||| |||||||||| ||||||||||||| ||||| | |||||||| || |||| Sbjct: 87400 aaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagactc 87341 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 87340 ctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacga 87281 Query: 557 agatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||||||||| |||| |||| ||| |||||||| | ||||| ||||| |||||||||| Sbjct: 87280 agatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccctt 87221 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 ||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 87220 tgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttcaa 87161 Query: 676 tctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||| ||||| ||||| ||||||||| ||| |||||||||||||||| Sbjct: 87160 tctcgtttaccggcaagtctctttactc-ttccgtaatacaagatcccg 87113 Score = 242 bits (122), Expect = 2e-60 Identities = 250/290 (86%), Gaps = 2/290 (0%) Strand = Plus / Plus Query: 436 ggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcac 494 |||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || | Sbjct: 52034 ggaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagat 52093 Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 || |||||||||||||| || |||||||||||||||||||||||||||| |||||||| Sbjct: 52094 tcctcggtcaatatccaacagcgggacctggatgcccatattggatcctacatattctac 52153 Query: 555 gaagatcttatcgttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 ||||||||||||||| || ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 52154 gaagatcttatcgtttgaaatcagtgccaaggattcatataatcccgtatgtcattccct 52213 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 52214 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 52273 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 52274 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 52323 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||||||||| ||||| | |||||||| || ||| Sbjct: 55227 gaaccttaagtgtgcagaccccgcgggttcgagaactatgtagacatgacccgagagact 55168 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 55167 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctaca 55108 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 55107 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 55048 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| | || |||||||||||| Sbjct: 55047 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtctccgtatacctatttca 54988 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 54987 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 54938 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 90480 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 90539 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 90540 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctaca 90599 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| ||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 90600 aagatcttatcgtttgaaccttagtgccaaggattcatataatcccgtatgtcattccct 90659 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||| | Sbjct: 90660 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccacatacctatttaa 90719 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 90720 gtctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 90769 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| | ||| | |||||||| || ||| Sbjct: 119381 gaaccttaagtgtgcagaccctgcgggttcgagaaccatgtagacatgacccgagagact 119440 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 119441 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 119500 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| ||||||| | ||||| ||||| ||||||||| Sbjct: 119501 aagatcttatcgtttgaacctcagtgcgaaggattcatataatcccgtatgtcattccct 119560 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 119561 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 119620 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| ||||| ||||||||||||| | |||||||||||||| Sbjct: 119621 atctcgtttactggcaagtctctttactcgttccgcaatacaagatcccg 119670 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||| |||||| ||||| | |||||||| || ||| Sbjct: 173248 gaaccttaagtgtgcagaccctgcgggctcgagaactatgtagacatgacccgagtgact 173307 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||| |||||||||||||||| |||||| ||||||||| Sbjct: 173308 cctcggtcaatatccaatagcgggaactggatgcccatattgaatcctatatattctacg 173367 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || |||| ||| |||||||| | ||||| ||||| | ||||||| Sbjct: 173368 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgttattccct 173427 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 173428 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 173487 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| |||||| ||||||||||||| |||||||||||||||| Sbjct: 173488 atctcgtttaccgacaagtctctttactcgttccgtaatacaagatcccg 173537 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 365354 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacctgagagact 365295 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | Sbjct: 365294 tctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctatg 365235 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| | ||||||| Sbjct: 365234 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgttattccct 365175 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||| ||||||| |||| ||||||||||||| Sbjct: 365174 ttgtccttcggtatgttacttgcccgagatttgatcgtcagtatccgcatacctatttca 365115 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 365114 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 365065 Score = 236 bits (119), Expect = 9e-59 Identities = 252/291 (86%), Gaps = 4/291 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 80302 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 80243 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 80242 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 80183 Query: 556 aagatc-ttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccc 613 |||||| |||||| |||| |||| ||| |||||||| ||||| ||||| |||||||| Sbjct: 80182 aagatctttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccc 80123 Query: 614 tttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttc 673 ||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 80122 tttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttc 80063 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||| ||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 80062 aatctcgtttaccggcaagtctctttactcgttccataatacaagatcccg 80012 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||| |||||| ||||| | |||||||| || ||| Sbjct: 125930 gaaccttaagtgtgcagaccctgcgggctcgagaactatgtagacatgaccggagtgact 125989 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | Sbjct: 125990 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctatatattctatg 126049 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||| | |||| |||| ||| |||||||| | ||||| ||||| | ||||||| Sbjct: 126050 aagatcttattgtttgaacctcagtgccaaggattcatataatcccgtatgttattccct 126109 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||| |||||||| Sbjct: 126110 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatatctatttca 126169 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| |||||| |||||||||||||||||||||||||||||| Sbjct: 126170 atctcgtttactgacaagtctctttactcgttctgtaatacaagatcccg 126219 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||| |||||| ||||| | |||||||| || ||| Sbjct: 166426 gaaccttaagtgtgcagaccctgcgggctcgagaactatgtagacatgacccgagtgact 166485 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 166486 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctatatattctacg 166545 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| | ||||||| Sbjct: 166546 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgttattccct 166605 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 166606 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 166665 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||| | |||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 166666 atcttgtttactggcaagtctctttactcgttccgtaatacaagatcccg 166715 Score = 228 bits (115), Expect = 2e-56 Identities = 251/291 (86%), Gaps = 4/291 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 56932 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 56873 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 56872 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 56813 Query: 556 aagatc-ttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccc 613 |||||| |||||| |||| |||| ||| |||||||| ||||| |||| |||||||| Sbjct: 56812 aagatctttatcgtttgaacctcagtgccaaggattcgtataatcctgtatgtcattccc 56753 Query: 614 tttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttc 673 ||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 56752 tttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttc 56693 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||| ||||| ||||| ||||||||||||| |||||| ||||||||| Sbjct: 56692 aatctcgtttaccggcaagtctctttactcgttccgtaataaaagatcccg 56642 Score = 198 bits (100), Expect = 2e-47 Identities = 244/288 (84%), Gaps = 3/288 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||| ||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 380541 gaaccttaagtgtggagaccctgcgggttcgagaactatgtagacatgacccgagagact 380482 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| Sbjct: 380481 tcttggtcaatatccaatagcgggacctggatgcccatattgaatcctacatattctacg 380422 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| || | |||| ||| ||| |||| | ||||| ||||| | ||||||| Sbjct: 380421 aagatcttatcgtttcaacctcagtgccaaagattcatataatcccgtatgttattccct 380362 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||| ||||||| ||||| |||||| |||||| Sbjct: 380361 ttgtccttcggtatgttacttgcccgagatttgatcgtcagtatctgcataccaatttca 380302 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcc 721 |||||| ||||| ||||| ||||||||| ||| |||||||||||||| Sbjct: 380301 atctcgtttaccggcaagtctctttactcattccgtaatacaagatcc 380254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||||||||||||||||||||||||| ||||| Sbjct: 365479 tcctatatatcaatcttcgtttccggaccattctggaaaccctcgtgacgtccgtgatct 365420 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 365419 catccgggactccgaacaacattcggtaaccaac 365386 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||||||||||||||||||| ||||| ||||| Sbjct: 57057 tcctatatatcaatcttcgtttccggaccattctggaaaccctcgtgatgtccgtgatct 56998 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 56997 catccgggactccgaacaacattcggtaaccaac 56964 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 80427 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 80368 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 80367 catccgggactccgaacaacattcggtaaccaac 80334 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 125806 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 125865 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 125866 catccgggactc 125877 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||| |||||||||||||||||||| ||||| Sbjct: 51910 tcctatatatcaatcttcgtttccggacaattccggaaaccctcgtgacgtccgtgatct 51969 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 51970 catccgggactccgaacaacattcggtaaccaac 52003 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 119256 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 119315 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||| |||||||| ||| ||| ||| || |||||| Sbjct: 119316 catacgggactccgaacaacattcggtaaccaac 119349 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||| |||||||||||||||||||| ||||| Sbjct: 380666 tcctatatatcaatcttcgtttccggaccatttcggaaaccctcgtgacgtccgtgatct 380607 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 380606 catccgggactccgaacaacattcggtaaccaac 380573 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| ||||||||||||||||||| ||||| Sbjct: 166301 tcctatatatcaatcttcgtttccggaccattcctgaaaccctcgtgacgtccgtgatct 166360 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 166361 catccgggactc 166372 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||| ||||||||||||||||||| ||||||||||||||||| ||| ||| || Sbjct: 90378 cggaccattccggaaaccctcgtgacgtccctgatctcatccgggactccgaacaacatt 90437 Query: 395 ctgttaccaac 405 | || |||||| Sbjct: 90438 cggtaaccaac 90448 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||| |||||||||||||||||| | ||||||||||||||||| ||| ||| || Sbjct: 97485 cggaccattccggaaaccctcgtgacgtctgtgatctcatccgggactccgaacaacatt 97544 Query: 395 ctgttaccaac 405 | || |||||| Sbjct: 97545 cggtaaccaac 97555 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||| |||||||||||||||||||| ||||| Sbjct: 55352 tcctatatatcaatcttcgtttccggactattccggaaaccctcgtgacgtccgtgatct 55293 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||||||| |||| ||| ||| || ||| |||||| Sbjct: 55292 catccggaactccgaacaacattttgtaaccaac 55259 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||||||||||| ||||||| ||| ||||||||||||| Sbjct: 173146 cggaccattccggaaaccctcgtaacgtccgtgatatcatccgggactc 173194 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 55502 caccagcccactaagggctggtg 55480 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 57206 caccagcccactaagggctggtg 57184 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 80577 caccagcccactaagggctggtg 80555 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 87676 caccagcccactaagggctggtg 87654 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 380817 caccagcccactaagggctggtg 380795
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 339 bits (171), Expect = 9e-90 Identities = 363/423 (85%), Gaps = 3/423 (0%) Strand = Plus / Plus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||| ||||||| | ||||| |||||| ||||| |||||||||||||||||| | || Sbjct: 99585 acttcctgtatatcaatcttcatttacggaccattccggaaaccctcgtgacgtctgaga 99644 Query: 369 tctcatccgggactctgaaaaaccttctgttaccaacatcaataattcaactataccgaa 428 |||||||| ||||| ||| ||||||| || ||||||| |||| |||||||||||||| Sbjct: 99645 tctcatcccggacttcgaataaccttcagtcaccaacacatataactcaactataccgaa 99704 Query: 429 acatcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca 488 || |||| ||||||||| |||| ||||| ||||||||||||| ||||| | ||||||| Sbjct: 99705 acgtcaccgaaccttaagtgtgaagaccctgcgggttcgagaactatgcagacatgacgt 99764 Query: 489 -aggcactctccggtcaatatccaatagttggacctggatgcccatattggatcctactt 547 || ||||| ||||||||| |||| || ||||||| |||| ||||| ||| |||||| | Sbjct: 99765 gagacactcctcggtcaataaccaacagctggacctagatgtccataatggctcctacat 99824 Query: 548 attctacgaagatct-tatcg-ttgagcctctgtgtcaaggatttagttaatctcgtata 605 ||||||||||||||| ||||| |||| ||||| ||||||||||| | ||||| |||||| Sbjct: 99825 attctacgaagatctctatcggttgaacctctatgtcaaggattcatataatcccgtata 99884 Query: 606 tcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccata 665 ||||||||||||||| |||||||| |||||||||||||| |||||| |||||||||| Sbjct: 99885 ctattccctttgtccttcggtatgttacttgcccgagattcggtcgtcggtatctccata 99944 Query: 666 cctatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||| ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 99945 cctagttcaatctcgttaccggcaagtctctttactcgttccgtaatacaagatcccgtg 100004 Query: 726 gct 728 ||| Sbjct: 100005 gct 100007 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||||||||| ||||| | |||||||| || ||| Sbjct: 4635 gaaccttaagtgtgcagaccccgcgggttcgagaactatgtagacatgacccgagagact 4576 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 4575 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 4516 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 4515 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 4456 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 4455 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 4396 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||| ||| |||||||||||||||| Sbjct: 4395 atctcgtttaccggcaagtctctttactcattccgtaatacaagatcccg 4346 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 11427 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 11368 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 11367 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 11308 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 11307 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 11248 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 11247 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 11188 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 || ||| ||||| ||||| ||||||||| ||| |||||||||||||||| Sbjct: 11187 atatcgtttaccggcaagtctctttactcattccgtaatacaagatcccg 11138 Score = 250 bits (126), Expect = 6e-63 Identities = 255/294 (86%), Gaps = 3/294 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||| ||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 78723 gaaccttaagtgtgaagaccctgcgggttcgagaactatgtagacatgacccgagagact 78664 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| || ||| || Sbjct: 78663 cctcggtcaatatccaatagcaggacctggatgcccatattggatcctacatactctccg 78604 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 78603 aagatcttatcggttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 78544 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||| |||| |||| ||||||||||||| Sbjct: 78543 ttgtccttcggtatgttacttgcccgagattcgaccgtcagtatccgcatacctatttca 78484 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgtggc 727 |||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| Sbjct: 78483 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccgtggc 78430 Score = 238 bits (120), Expect = 2e-59 Identities = 252/292 (86%), Gaps = 3/292 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | | |||||| || ||| Sbjct: 85603 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagaaatgacccgagagact 85544 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| | ||| || Sbjct: 85543 cctcggtcaatatccaatagcaggacctggatgcccatattggatcctacatgctctccg 85484 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 85483 aagatcttatcggttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 85424 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 85423 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 85364 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||| ||||| ||||| ||||||||| ||| |||||||||||||||||| Sbjct: 85363 atctcgtttaccggcaagtctctttactcattccgtaatacaagatcccgtg 85312 Score = 159 bits (80), Expect = 2e-35 Identities = 119/132 (90%) Strand = Plus / Plus Query: 594 taatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtc 653 ||||| |||||| |||||||||||||||| ||||||| |||||| ||||| ||||||| Sbjct: 58443 taatcccgtataacattccctttgtccttcgatatgttacttgcccaagatttgatcgtc 58502 Query: 654 gatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaata 713 | |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 58503 ggtatctctatacctatttcaatctcgttaccggcaagtctctttactcgttctgtaata 58562 Query: 714 caagatcccgtg 725 |||||||||||| Sbjct: 58563 caagatcccgtg 58574 Score = 145 bits (73), Expect = 3e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| ||||| | | |||| ||||| ||||||||||||||||||| ||||| Sbjct: 42032 tcctatatatcaatattcgtttccggaccattccagaaaccctcgtgacgtccgtgatct 42091 Query: 372 catccgggactctgaaaaaccttctgttaccaacatcaataattcaactataccgaaaca 431 |||||||||||| ||| ||||||| || ||||||| | |||| |||||||||||||||| Sbjct: 42092 catccgggactccgaacaaccttcggtcaccaacacctataactcaactataccgaaacg 42151 Query: 432 tcacggaaccttaactgtgcagacc 456 |||| ||||||||| |||||||||| Sbjct: 42152 tcaccgaaccttaagtgtgcagacc 42176 Score = 131 bits (66), Expect = 4e-27 Identities = 119/134 (88%), Gaps = 2/134 (1%) Strand = Plus / Plus Query: 458 tgcgggttcgagagctatgaatacatgacca-aggcactctccggtcaatatccaatagt 516 ||||||||||||| ||||| | |||||||| || ||||| ||| ||||||||||||| Sbjct: 53702 tgcgggttcgagaactatgtagacatgacctgagacactcctcggccaatatccaatagc 53761 Query: 517 tggacctggatgcccatattggatcctacttattctacgaagatcttatc-gttgagcct 575 ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||| Sbjct: 53762 gggacctggatgtccatattggatcctacatattctacgaagatcttatcggttgaacct 53821 Query: 576 ctgtgtcaaggatt 589 |||||||||||||| Sbjct: 53822 ctgtgtcaaggatt 53835 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 4760 tcctatatatcattcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 4701 Query: 372 catccgggactc 383 |||||| ||||| Sbjct: 4700 catccgagactc 4689 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||| | ||||| Sbjct: 78848 tcctatatatcaatcttcgtctccggaccattccggaaaccctcgtgacgtctgtgatct 78789 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||| |||||||| ||| ||| ||| || |||||| Sbjct: 78788 cattcgggactccgaacaacattcggtaaccaac 78755 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 347 gaaaccctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||||||||| ||||||||||||||||| Sbjct: 11517 gaaaccctcgtgacgtccgtgatctcatccgggactc 11481 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 |||| ||||||||| ||| || |||| | |||||| |||||||||||||| | ||||| Sbjct: 88648 ttgctcgagattcgctcggcggtatccctataccttgttcaatctcgttactagcaagtc 88707 Query: 694 tctttactcgttctgtaatacaagatcccgtggct 728 ||||||||||||| |||| ||| ||| ||||||| Sbjct: 88708 tctttactcgttccgtaacacatcatcacgtggct 88742 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 41897 caccagcccactaagggctggtgcgccaccct 41928 Score = 50.1 bits (25), Expect = 0.012 Identities = 25/25 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatcc 376 ||||||||||||||||||||||||| Sbjct: 88364 cctcgtgacgtccgggatctcatcc 88388 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||||||||||||||||| ||||||| Sbjct: 4911 caccagcccactaagggctggtgtgccaccct 4880 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||||||||||||||| || ||||||| Sbjct: 43046 caccagcccactaagggctggcgcgccaccct 43077 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgc 182 |||||||||||||||||||||||| Sbjct: 85878 caccagcccactaagggctggtgc 85855 Score = 44.1 bits (22), Expect = 0.72 Identities = 55/66 (83%) Strand = Plus / Minus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 ||||| ||||| ||||||||| | || ||| ||||||||||||| ||| ||| ||| || Sbjct: 85700 cattccggaaatcctcgtgacattcgtgatatcatccgggactccgaacaacattcggta 85641 Query: 400 accaac 405 |||||| Sbjct: 85640 accaac 85635 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 162 cagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||| ||||||| Sbjct: 11698 cagcccactaagggctggtgtgccaccct 11670 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 41966 cccattcgtcactcccggtac 41986
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 327 bits (165), Expect = 3e-86 Identities = 339/393 (86%), Gaps = 3/393 (0%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||||||| |||||||| |||| |||||||||| |||||| ||| ||| || Sbjct: 82748 cggaccattctggagctcctcgtgatgtcctggatctcatcaaggactccgaacaacttt 82689 Query: 395 ctgttaccaacatcaataattcaactataccgaaacatcacggaaccttaactgtgcaga 454 | |||||||||| | |||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 82688 cggttaccaacacctataactcaactataccgaaacatcatcgaaccttaagtgtgcaga 82629 Query: 455 ccttgcgggttcgagagctatgaatacatgacca-aggcactctccggtcaatatccaat 513 || ||||| ||||||| ||||| | ||||| || ||| |||| ||||||||||||||| Sbjct: 82628 ccctgcgg-ttcgagaactatgtagacatgccccgaggtactcctcggtcaatatccaat 82570 Query: 514 agttggacctggatgcccatattggatcctacttattctacgaagatcttatcg-ttgag 572 || ||| |||||||||||||||||||||||| |||||| |||||||||||||| |||| Sbjct: 82569 agcgggatctggatgcccatattggatcctacatattctccgaagatcttatcggttgaa 82510 Query: 573 cctctgtgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgtta 632 |||| |||||||||||| | ||||| ||||| |||||||||||||||||| |||||||| Sbjct: 82509 cctcagtgtcaaggattcatgtaatcccgtatgtcattccctttgtcctttggtatgtta 82450 Query: 633 gttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagt 692 |||||||||||| |||||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 82449 cttgcccgagatttgatcgtcggtatccgcatacctatttcaatctcattaccggcaagt 82390 Query: 693 atctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||| ||||||| |||||||||| Sbjct: 82389 ctctttactcgttccgtaataccagatcccgtg 82357 Score = 281 bits (142), Expect = 2e-72 Identities = 326/381 (85%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 348 aaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttacca-aca 406 |||||||||||| ||||| ||||||||||||||||| ||| ||| ||| || |||| ||| Sbjct: 70838 aaaccctcgtgatgtccgtgatctcatccgggactccgaacaacattcggtaaccacaca 70897 Query: 407 tcaataattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttc 466 | |||| |||||||||| |||||||| |||||||| |||||||||| ||||||||| Sbjct: 70898 t--ataactcaactatactaaaacatcaacgaaccttatgtgtgcagaccctgcgggttc 70955 Query: 467 gagagctatgaatacatgacca-aggcactctccggtcaatatccaatagttggacctgg 525 |||| |||| | ||||| || ||| |||| ||||||||||||||||| |||||||| Sbjct: 70956 gagaactatctagacatgccccgaggtactcctcggtcaatatccaatagcgggacctgg 71015 Query: 526 atgcccatattggatcctacttattctacgaagatcttatc-gttgagcctctgtgtcaa 584 |||||| ||||||||||||| || ||| | ||||||||||| ||||| |||| ||||||| Sbjct: 71016 atgcccttattggatcctacatactctccaaagatcttatcagttgaacctcagtgtcaa 71075 Query: 585 ggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagat 644 ||||| | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 71076 ggattcatataatcccgtatgtcattccctttgtccttcggtatgttacttgcccgagat 71135 Query: 645 tcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgt 704 | |||||||| |||| |||||||||||||||||||||||| ||||| | ||||||||| Sbjct: 71136 ttgatcgtcggtatccgcatacctatttcaatctcgttaccggcaagtttatttactcgt 71195 Query: 705 tctgtaatacaagatcccgtg 725 | ||||||||||||||||||| Sbjct: 71196 t-tgtaatacaagatcccgtg 71215 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 64504 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 64563 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 64564 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 64623 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| || |||||||| | ||||| ||||| ||||||||| Sbjct: 64624 aagatcttatcgtttgaacctcaatgccaaggattcatataatcccgtatgtcattccct 64683 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||| ||| ||||| |||||||||||||| |||| ||||||||||||| Sbjct: 64684 ttgtccttcggtattttacttgcctgagattcgatcgtcagtatccgcatacctatttca 64743 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 64744 atctcgtttaccagcaagtctctttactcgttccgtaatacaagatcccg 64793 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 57731 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 57790 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||| ||||||| |||||||||||||||||||||||||||| |||| |||| Sbjct: 57791 cctcggtcaatacccaatagcgggacctggatgcccatattggatcctacatattatacg 57850 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 57851 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 57910 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||| ||||||||||||| |||| ||||||||||||| Sbjct: 57911 ttgtccttcggtatgttacttgcctcagattcgatcgtcagtatccgcatacctatttca 57970 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 57971 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 58020 Score = 174 bits (88), Expect = 3e-40 Identities = 198/232 (85%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||||||| ||||||| ||||| ||||||||| |||||||| ||| ||| || Sbjct: 97893 cggaccattctggagctcctcgtggcgtcctggatctcattcgggactccgaacaacttt 97834 Query: 395 ctgttaccaacatcaataattcaactataccgaaacatcacggaaccttaactgtgcaga 454 | |||||||||| | ||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 97833 cggttaccaacacctgtaactcaactataccgaaacatcatcgaaccttaagtgtgcaga 97774 Query: 455 ccttgcgggttcgagagctatgaatacat-gaccaaggcactctccggtcaatatccaat 513 || ||| ||||||||| ||||| | |||| || ||| |||| ||||||||||||||| Sbjct: 97773 ccctgc-ggttcgagaactatgtagacatcccccgaggtactcctcggtcaatatccaat 97715 Query: 514 agttggacctggatgcccatattggatcctacttattctacgaagatcttat 565 || |||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 97714 agagggacctggatgcccatattggatcctacatattctccgaagatcttat 97663 Score = 145 bits (73), Expect = 3e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 578 gtgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgc 637 |||||||||||| | ||||| ||||| ||||||||||||||||| |||||||| |||| Sbjct: 97661 gtgtcaaggattcatataatcccgtatgtcattccctttgtccttcggtatgttacttgc 97602 Query: 638 ccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctt 697 |||||||| |||||||| |||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 97601 ccgagatttgatcgtcggtatccgcatgcctatttcaatctctttaccggaaagtctctt 97542 Query: 698 tactcgttctgtaatacaagatccc 722 ||||||||||||||||||||||||| Sbjct: 97541 tactcgttctgtaatacaagatccc 97517 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||||||||||||||||||||||||| ||||| Sbjct: 64379 tcctatatatcaatcttcgttttcggaccattctggaaaccctcgtgacgtccgtgatct 64438 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 64439 catccgggactc 64450 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||| |||||||||||||||||||| ||||||||||||||||||||| ||| || Sbjct: 57629 cggaccattccggaaaccctcgtgacgtccgtgatctcatccgggactctgaacaacatt 57688 Query: 395 ctgttaccaac 405 | || |||||| Sbjct: 57689 cggtaaccaac 57699 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| ||| | |||||| ||||||||||||||| |||| Sbjct: 27240 ttgcccgagattcgatcgtcggtatacctataccttgttcaatctcgttaccggtaagtc 27181 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 27180 tctttactcgttc 27168 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 333 tacggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||||| ||||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 20475 tacggaccattctggagctcctcgtgatgtccgagatctcatccgggactc 20425 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||||||||||||||||||||||| |||||| Sbjct: 70648 caccagcccactaagggctggtgcgccaccc 70678 Score = 48.1 bits (24), Expect = 0.046 Identities = 45/52 (86%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||||||||||||||||| ||| | |||||| |||||| |||||||| Sbjct: 20172 ttgcccgagattcgatcgtcggtatacctataccttgttcaatatcgttacc 20121 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| ||||||||||||||||||||| Sbjct: 27524 cctcatgacgcccgggatctcatccgggactc 27493 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 70736 cccattcgtcactcccggtac 70756
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 315 bits (159), Expect = 1e-82 Identities = 333/386 (86%), Gaps = 5/386 (1%) Strand = Plus / Plus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 |||||||||||||||||||||||||| ||||| ||||||||||| || ||| ||| || Sbjct: 66495 cattctggaaaccctcgtgacgtccgtgatctaatccgggactccaaacaacattcggta 66554 Query: 400 accaa-catcaataattcaactataccgaaacatcacggaaccttaactgtgcagacctt 458 |||| ||| |||| |||||||||| |||||||| ||||||||| |||||||||| | Sbjct: 66555 accacgcat--ataactcaactatactaaaacatcatcgaaccttaagtgtgcagaccct 66612 Query: 459 gcgggttcgagagctatgaatacatgacca-aggcactctccggtcaatatccaatagtt 517 |||||||||||| ||||| | ||||| || |||||||| |||||||||||| ||||| Sbjct: 66613 gcgggttcgagaactatgtagacatgccccgaggcactcctcggtcaatatccgatagtg 66672 Query: 518 ggacctggatgcccatattggatcctacttattctacgaagatcttatcg-ttgagcctc 576 |||||||||||||||||||||||||||| |||||| |||||||||||||| || | |||| Sbjct: 66673 ggacctggatgcccatattggatcctacatattctccgaagatcttatcggttaaacctc 66732 Query: 577 tgtgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttg 636 |||||||||||| | ||||| ||||| ||||||| ||||||||| |||||||| ||| Sbjct: 66733 agtgtcaaggattcatataatcccgtatgtcattccgtttgtccttcggtatgttacttg 66792 Query: 637 cccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatct 696 ||||||||| |||||||| |||| ||||||||||||||||||||| || ||||| ||| Sbjct: 66793 cccgagatttgatcgtcggtatccgcatacctatttcaatctcgtttccggcaagtctct 66852 Query: 697 ttactcgttctgtaatacaagatccc 722 |||||| ||||||||||||||||||| Sbjct: 66853 ttactcattctgtaatacaagatccc 66878 Score = 299 bits (151), Expect = 8e-78 Identities = 352/414 (85%), Gaps = 5/414 (1%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | ||| ||||| ||||||||||| |||||||| ||| | Sbjct: 75425 tcctatatatcaatcttcatttttggaccattccggaaaccctcgcgacgtccgtgatat 75484 Query: 372 catccgggactctgaaaaaccttctgttacca-acatcaataattcaactataccgaaac 430 |||||||||||| ||||||| ||| || |||| |||| |||| |||||||||| |||| Sbjct: 75485 catccgggactccgaaaaacattccgtaaccacacat--ataactcaactatactaaaac 75542 Query: 431 atcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-a 489 |||| || ||||| |||||||||| ||||||||||||||||||| | |||||||| | Sbjct: 75543 atcatcaaaacttaagtgtgcagaccctgcgggttcgagagctatgtagacatgacccga 75602 Query: 490 ggcactctccggtcaatatccaatagttggacctggatgcccatattggatcctacttat 549 | ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 75603 gacactccttggtcaatatccaatagtgggacctggatgcccatattggatcctacatat 75662 Query: 550 tctacgaagatcttatc-gttgagcctctgtgtcaaggatttagttaatctcgtatatca 608 ||| ||||||||||||| ||||| |||| | | |||||||| | ||||| ||||| ||| Sbjct: 75663 tctccgaagatcttatcggttgaacctcagcgccaaggattcatataatcccgtatgtca 75722 Query: 609 ttccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacct 668 |||||||||| ||| |||||||| |||||||||||| |||| ||| |||| |||||| Sbjct: 75723 ttccctttgttcttcggtatgttacttgcccgagatttgatcatcggtatccgtatacct 75782 Query: 669 atttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatccc 722 |||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 75783 atttcaatctcgttactggaaagtctctttactcgttctgtaatacaagatccc 75836 Score = 274 bits (138), Expect = 4e-70 Identities = 255/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 73807 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 73748 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 73747 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 73688 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct: 73687 aagatcttatcgtttgaacctcagtgtcaaggattcatataatcccgtatgtcattccct 73628 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 73627 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 73568 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| || |||||||||| |||||||||||||||| Sbjct: 73567 atctcgtttaccggcaagtctcattactcgttccgtaatacaagatcccg 73518 Score = 256 bits (129), Expect = 1e-64 Identities = 257/297 (86%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 427 aaacatcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||| ||| ||||||| | |||||||||| ||||||||||||| ||||| | ||||||| Sbjct: 44498 aaacaacaccgaaccttcagtgtgcagaccctgcgggttcgagaactatgtagacatgac 44557 Query: 487 ca-aggcactctccggtcaatatccaatagttggacctggatgcccatattggatcctac 545 | ||| | || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 44558 ccgagggaatcctcggtcaatatccaatagcgggacctggatgcccatattggatcctac 44617 Query: 546 ttattctacgaagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtat 604 ||||||||||||||||||||| |||| ||| ||| |||||||| | |||||| |||| Sbjct: 44618 atattctacgaagatcttatcgattgaacctgagtgccaaggattcatataatcttgtat 44677 Query: 605 atcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccat 664 ||||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||| Sbjct: 44678 gtcattccctttgtccttcggtatgttacttgcccgagattcgatcgtcggtatccgcat 44737 Query: 665 acctatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcc 721 |||||||||||||||||| | ||||| ||||||||||||| |||| ||||||||| Sbjct: 44738 acctatttcaatctcgtttactgcaagtctctttactcgttccgtaacacaagatcc 44794 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 73932 tcctatatatcaatcttcatttccggaccattccggaaaccctcgtgacgtccgtgatct 73873 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 73872 catccgggactccgaacaacattcggtaaccaac 73839 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 31201 cctcgtgacgtccgggatctcatccgggactc 31170 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 38230 cctcgtgacgtccgggatctcatccgggactc 38199 Score = 63.9 bits (32), Expect = 8e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| ||||||||||||||| | || ||||| Sbjct: 44383 tcctatatatcaattttcatttccggaccattccggaaaccctcgtgacattcgtgatct 44442 Query: 372 catccgggactc 383 |||| ||||||| Sbjct: 44443 catctgggactc 44454 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 74088 caccagcccactaagggctggtgcgccaccct 74057 Score = 50.1 bits (25), Expect = 0.012 Identities = 62/73 (84%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| || | |||||| ||||||||||||||| |||| Sbjct: 37946 ttgcccgagattcgatcgtcg-gatgcctataccttgttcaatctcgttaccggtaagtc 37888 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 37887 tctttactcgttc 37875 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgc 182 |||||||||||||||||||||||| Sbjct: 44233 caccagcccactaagggctggtgc 44256 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcg 654 ||||||||||||||||||||| Sbjct: 30917 ttgcccgagattcgatcgtcg 30897 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 44318 cccattcgtcactcccggtac 44338 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 66410 cccattcgtcactcccggtac 66430
>emb|AJ582612.1|HPU582612 Hordeum pusillum retrotransposon BARE1 long terminal repeat DNA, clone HPUSE Length = 1891 Score = 309 bits (156), Expect = 8e-81 Identities = 327/380 (86%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||||||||||||||||||| ||||||||||| ||||||| || || | ||| || Sbjct: 951 cctcgtgacgtccgggatctcatctgggactctgaacaaccttcggtcacaaccatacat 892 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || || |||||| ||||||||||| ||||||||| |||||||||| ||||||||||||| Sbjct: 891 aactctactatatcgaaacatcaccgaaccttaagtgtgcagaccctgcgggttcgagaa 832 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| || ||| ||| ||| ||||| ||||||| ||||||||||||| Sbjct: 831 ctatgcagacatgaccgagacacctctacggccaataaacaatagtgggacctggatgcc 772 Query: 531 catattggatcctacttattctacgaagatctt-atcg-ttgagcctctgtgtcaaggat 588 |||||||| ||| || |||||||||||||| || |||| |||| ||||| |||||||||| Sbjct: 771 catattggttcccacatattctacgaagatatttatcggttgaacctctatgtcaaggat 712 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | |||||||| ||||| | |||||||||| ||| |||| ||| ||||||||||||||| Sbjct: 711 tcagttaatcccgtatgttgttccctttgttcttcggtattttacttgcccgagattcga 652 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||| | |||||| ||||||| |||||||| ||||| ||||| ||||||||||||| | Sbjct: 651 tcgttggtatctctatacctagttcaatcttgttactggcaagtctctttactcgttccg 592 Query: 709 taatacaagatcccgtggct 728 |||||||||||||||||||| Sbjct: 591 taatacaagatcccgtggct 572
>emb|AJ582611.1|HPU582611 Hordeum pusillum retrotransposon BARE1 long terminal repeat DNA, clone HPUSD Length = 1564 Score = 309 bits (156), Expect = 8e-81 Identities = 327/380 (86%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||||||||||||||||||||||||||| ||| ||||||| | |||||||| || Sbjct: 824 cctcgtgacgtccgggatctcatccgggactccgaacaaccttcgatcaccaacatacat 765 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || |||| |||||||||| ||| |||| |||| |||||||||| ||||||||||||| Sbjct: 764 aactcaataataccgaaacgtcatcgaacgttaagtgtgcagaccctgcgggttcgagaa 705 Query: 472 ctatgaatacatgaccaaggca-ctctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| || || |||| ||||||||| ||||||| ||||||||||||| Sbjct: 704 ctatgtagacatgaccgagacacctctacggtcaataaccaatagcgggacctggatgcc 645 Query: 531 catattggatcctacttattctacgaagatc-ttatc-gttgagcctctgtgtcaaggat 588 |||||||| |||||| ||||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 644 catattggttcctacatattctacgaagatctttatcggttgaacctctatgtcaaggat 585 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | ||||||||| ||| |||||||||| | |||||||| ||||| ||||||||| Sbjct: 584 tcagttaatcttgtacgatgttccctttgtttatcggtatgttacttgcctgagattcga 525 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||| | Sbjct: 524 tcgtcggtatctccatacctagttcaatctcgttaccggcaagtctctttactcgttccg 465 Query: 709 taatacaagatcccgtggct 728 |||||||||||| ||||||| Sbjct: 464 taatacaagatctcgtggct 445
>emb|Y18774.2|HROY18774 Hordeum roshevitzii BARE-1 long terminal repeat DNA (HROSC) Length = 1797 Score = 301 bits (152), Expect = 2e-78 Identities = 326/380 (85%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||||||||||||||||||||||||||| ||| ||||||| || |||| | | || Sbjct: 955 cctcgtgacgtccgggatctcatccgggactccgaacaaccttcggtcaccaccttacat 896 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || || |||||||| |||| || | ||||||||| |||||||||| ||||||||||||| Sbjct: 895 aactctactataccaaaacgtcgccgaaccttaagtgtgcagaccctgcgggttcgagaa 836 Query: 472 ctatgaatacatgaccaaggca-ctctccggtcaatatccaatagttggacctggatgcc 530 ||||| |||||||| || || |||| ||| ||||| ||||||| ||||||||||||| Sbjct: 835 ctatgtggacatgaccgagacacctctacggccaataaccaatagcgggacctggatgcc 776 Query: 531 catattggatcctacttattctacgaagatc-ttatc-gttgagcctctgtgtcaaggat 588 |||||||| |||||| ||||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 775 catattggttcctacatattctacgaagatctttatcggttgaacctctatgtcaaggat 716 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | |||||||| ||||| |||||||||| | |||||||| ||||||||||||||| Sbjct: 715 tcagttaatcccgtatgatgttccctttgtttatcggtatgttacttgcccgagattcga 656 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||||| |||||| ||||||| |||||||||||||| ||||| ||||||||||||| | Sbjct: 655 tcgtcggtatctctatacctagttcaatctcgttactggcaagtctctttactcgttccg 596 Query: 709 taatacaagatcccgtggct 728 |||||||||||||||||||| Sbjct: 595 taatacaagatcccgtggct 576
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 295 bits (149), Expect = 1e-76 Identities = 326/380 (85%), Gaps = 5/380 (1%) Strand = Plus / Minus Query: 346 ggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttacca-a 404 |||||||||||||||||| | ||||||||| ||||||| ||| ||| ||| || |||| | Sbjct: 44132 ggaaaccctcgtgacgtctgtgatctcatctgggactccgaacaacattcggtaaccaca 44073 Query: 405 catcaataattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggt 464 ||| |||| |||||||||| ||||||||| ||||||||| |||||||||| |||||| Sbjct: 44072 cat--ataactcaactatactaaaacatcaccgaaccttaagtgtgcagaccccgcgggt 44015 Query: 465 tcgagagctatgaatacatgacca-aggcactctccggtcaatatccaatagttggacct 523 |||||| ||||| | ||||| || ||| |||| ||||||||||||||||| |||||| Sbjct: 44014 tcgagaactatgtagacatgccccgaggtactcgtcggtcaatatccaatagcgggacct 43955 Query: 524 ggatgcccatattggatcctacttattctacgaagatcttatcg-ttgagcctctgtgtc 582 ||||||||||||||||||||| |||||| |||| | ||||||| |||| |||| ||||| Sbjct: 43954 cgatgcccatattggatcctacatattctccgaataacttatcggttgaacctcagtgtc 43895 Query: 583 aaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgag 642 ||||||| | ||||| ||||| ||||||||||||||||| ||| |||| ||||||||| Sbjct: 43894 aaggattcatataatcccgtatgtcattccctttgtccttcggtaagttacttgcccgag 43835 Query: 643 attcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactc 702 |||||||||||| |||| ||||||||||||||||||||| || ||||| ||||||||| Sbjct: 43834 attcgatcgtcggtatccgcatacctatttcaatctcgtttccggcaagtctctttactc 43775 Query: 703 gttctgtaatacaagatccc 722 |||| ||||||||||||||| Sbjct: 43774 gttccgtaatacaagatccc 43755 Score = 242 bits (122), Expect = 2e-60 Identities = 248/286 (86%), Gaps = 3/286 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 58929 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagtgact 58988 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 58989 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 59048 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| |||||||| Sbjct: 59049 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgccattccct 59108 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 59109 ttgtccttcggtatgttacttgcccgagattcgatcgttagtatccgcatacctatttca 59168 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagat 719 |||||| ||||| ||||| |||||||||||| |||||||||||| Sbjct: 59169 atctcgtttaccggcaagtccctttactcgttccgtaatacaagat 59214 Score = 240 bits (121), Expect = 6e-60 Identities = 247/285 (86%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 52160 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagtgact 52219 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 52220 cctcggtcaatatccaatagcaggacctggatgcccatattggatcctacatattctacg 52279 Query: 556 aagatcttatc-gttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 ||||||||||| |||| |||| ||| |||||||| | ||||| ||||| |||||||| Sbjct: 52280 aagatcttatcatttgaacctcagtgccaaggattcatataatcccgtatgccattccct 52339 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 52340 ttgtccttcggtatgttacttgcccgagattcgatcgttagtatccgcatacctatttca 52399 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaaga 718 |||||| ||||| ||||| ||||||||||||| ||||||||||| Sbjct: 52400 atctcgtttaccggcaagtctctttactcgttccgtaatacaaga 52444 Score = 218 bits (110), Expect = 2e-53 Identities = 268/318 (84%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 410 ataattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgag 469 |||| |||||||||| ||||||| | || ||||| |||||||||| |||||||||||| Sbjct: 51182 ataactcaactatactaaaacatcgccgagtcttaagtgtgcagaccctgcgggttcgag 51123 Query: 470 agctatgaatacatgac-caaggcactctccggtcaatatccaatagttggacctggatg 528 | ||||| ||||| | | ||| |||| |||||||||||||||| |||||| |||| Sbjct: 51122 aactatgtggacatgcctcgaggtactccttggtcaatatccaatagcgggacctcgatg 51063 Query: 529 cccatattggatcctacttattctacgaagatcttatcg-ttgagcctctgtgtcaagga 587 ||||||||||||||| | |||||| |||| | |||||| |||| |||| |||||||||| Sbjct: 51062 cccatattggatcctccatattctccgaataacttatcaattgaacctcagtgtcaagga 51003 Query: 588 tttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcg 647 || | ||||| |||| | ||||||||||||||| |||||||| |||||| ||||||| Sbjct: 51002 ttcatataatcgtgtatgttgttccctttgtcctttggtatgttacttgcccaagattcg 50943 Query: 648 atcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttct 707 ||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 50942 atcgtcggtatccgcatacctatttcaatctcgttactgacaagtctctttactcgttcc 50883 Query: 708 gtaatacaagatcccgtg 725 |||||||||||||||||| Sbjct: 50882 gtaatacaagatcccgtg 50865 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 52035 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 52094 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||||||| ||| ||| || |||||| Sbjct: 52095 catccgggactctgaacaacattcggtaaccaac 52128 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 58804 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 58863 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 58864 catccgggactccgaacaacattcagtaaccaac 58897 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 59848 cggaccattccggaaaccctcgtgacgtccgtgatcttatccgggactc 59800 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||||||||||||||||||||||| |||||| Sbjct: 58654 caccagcccactaagggctggtgcgccaccc 58684 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| ||||||||||||||||||| Sbjct: 60012 caccagcccaccaagggctggtgcaccaccc 59982 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Minus Query: 219 tggcccctcccggtggaactctggatcccattcgtcactcccggta 264 ||||||||||||||| | || ||| |||||||||||||||||||| Sbjct: 59952 tggcccctcccggtgaacatccggaacccattcgtcactcccggta 59907 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 44318 caccagcccaccaagggctggtgcgccaccc 44288 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||||||||| |||||| |||||| Sbjct: 51879 caccagcccactaaggggtggtgcgccaccc 51909 Score = 42.1 bits (21), Expect = 2.9 Identities = 57/69 (82%) Strand = Plus / Minus Query: 219 tggcccctcccggtggaactctggatcccattcgtcactcccggtactttacctgcaatg 278 ||||||||||||||| | | ||| |||||||||||||| |||||| || || | |||| Sbjct: 44258 tggcccctcccggtgaacattcggaacccattcgtcactctcggtacattcccggtaatg 44199 Query: 279 tccgaaaac 287 |||||||| Sbjct: 44198 cccgaaaac 44190
>emb|Y18772.2|HROY18772 Hordeum roshevitzii BARE-1 long terminal repeat DNA (HROSA) Length = 1740 Score = 291 bits (147), Expect = 2e-75 Identities = 324/379 (85%), Gaps = 3/379 (0%) Strand = Plus / Minus Query: 353 ctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaata 412 ||||||||||||||||||||||||||||||| ||| |||||| || |||| ||| ||| Sbjct: 905 ctcgtgacgtccgggatctcatccgggactccgaaccaccttcggtcaccaccatacata 846 Query: 413 attcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagc 472 | || |||||||| |||| |||| | ||||||| ||||||||| ||||||||||||| | Sbjct: 845 actctactatacctaaacgtcaccggaccttaagcgtgcagaccctgcgggttcgagaac 786 Query: 473 tatgaatacatgaccaaggca-ctctccggtcaatatccaatagttggacctggatgccc 531 |||| | |||||||| || || |||| ||| ||||| ||||||| |||||||||||||| Sbjct: 785 tatgtagacatgaccgagacacctctacggccaataaccaatagcgggacctggatgccc 726 Query: 532 atattggatcctacttattctacgaagatc-ttatc-gttgagcctctgtgtcaaggatt 589 ||||||| |||||| ||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 725 atattggttcctacatattctacgaagatctttatcggttgaacctctatgtcaaggatt 666 Query: 590 tagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgat 649 |||||||| ||||| |||||||||| | ||||| || |||||||||||||||| Sbjct: 665 cagttaatcccgtatgatgttccctttgtttatcggtatgctacttgcccgagattcgat 606 Query: 650 cgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgt 709 ||||| |||||| ||||||| |||||||||||||| ||||| ||||||||||||| || Sbjct: 605 cgtcggtatctctatacctagttcaatctcgttactggcaagtctctttactcgttccgt 546 Query: 710 aatacaagatcccgtggct 728 ||||||||||||||||||| Sbjct: 545 aatacaagatcccgtggct 527
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 281 bits (142), Expect = 2e-72 Identities = 256/290 (88%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 45271 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 45330 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 45331 ccccggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 45390 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||||||||| ||||||||| Sbjct: 45391 aagatcttatcgtttgaacctcagtgccaaggattcatataatctcgtatgtcattccct 45450 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 45451 ttgtccttcggtatgttacttgcccgagattcgatcatcagtatccgcatacctatttca 45510 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 45511 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 45560 Score = 266 bits (134), Expect = 1e-67 Identities = 254/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||||| |||| ||||| | |||||||| || ||| Sbjct: 38152 gaaccttaagtgtgcagaccgtgcgggtttgagaactatgtagacatgacccgagagact 38211 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 38212 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 38271 Query: 556 aagatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 ||||||||||||| ||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 38272 aagatcttatcgtgtgaacctcagtgccaaggattcatataatcccgtatgtcattccct 38331 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 38332 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 38391 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 38392 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 38441 Score = 252 bits (127), Expect = 2e-63 Identities = 252/290 (86%), Gaps = 4/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 29415 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 29356 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 29355 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 29296 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 29295 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 29236 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 29235 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 29176 Query: 675 atctc--gttaccaacaagtatctttactcgttctgtaatacaagatccc 722 ||||| ||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 29175 atctcattttaccggcaagtctctttactcgttccgtaatacaagatccc 29126 Score = 252 bits (127), Expect = 2e-63 Identities = 253/291 (86%), Gaps = 3/291 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 122111 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 122052 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 122051 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 121992 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 121991 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 121932 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 121931 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 121872 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgt 724 | |||| ||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 121871 acctcgtttaccggcaagtttctttactcgttccgtaatacaagatcccgt 121821 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 102305 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 102364 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| Sbjct: 102365 cctcggtcaatatccaataacgggacgtggatgcccatattggatcctacatattctacg 102424 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || ||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 102425 aagatcttatcgtttgaacctaagtgccaaggattcatataatcccgtatgtcattccct 102484 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| | |||||||||||| Sbjct: 102485 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatcccaatacctatttca 102544 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 102545 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 102594 Score = 248 bits (125), Expect = 2e-62 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||| ||||||| ||||| | |||||||| || ||| Sbjct: 36529 gaaccttaagtgtgcagaccctgcggtttcgagaactatgtagacatgacccgagagact 36470 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | Sbjct: 36469 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctagg 36410 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 36409 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 36350 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 36349 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 36290 Query: 675 atctcg--ttaccaacaagtatctttactcgttctgtaatacaagatcccgt 724 |||||| ||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 36289 atctcgttttaccggcaagtctctttactcgttccgtaatacaagatcccgt 36238 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 36654 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 36595 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 36594 catccgggactccgaacaacattcggtaaccaac 36561 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| |||||||||| ||||||||| ||||| Sbjct: 45146 tcctatatatcaatcttcatttccggaccattccggaaaccctcatgacgtccgtgatct 45205 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 45206 catccgggactccgaacaacattcggtaaccaac 45239 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 122236 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 122177 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 122176 catccgggactccgaacaacattcggtaaccaac 122143 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||| ||||||||| ||||| Sbjct: 38027 tcctatatatcaatcttcgtttccggaccattccggaaaccctcatgacgtccgtgatct 38086 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 38087 catccgggactc 38098 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 ||||| |||||||||| |||||||| |||| |||||||||||| ||| ||| ||| || Sbjct: 102208 cattccggaaaccctcacgacgtccgtgatcccatccgggactccgaacaacattcggta 102267 Query: 400 accaac 405 |||||| Sbjct: 102268 accaac 102273 Score = 48.1 bits (24), Expect = 0.046 Identities = 42/48 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggact 382 |||| ||||| || |||||||||||||||| |||||||||| ||||| Sbjct: 29517 cggaccattccggtaaccctcgtgacgtccatgatctcatccaggact 29470 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgc 182 |||||||||||||||||||||||| Sbjct: 37868 caccagcccactaagggctggtgc 37891 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgc 182 |||||||||||||||||||||||| Sbjct: 44986 caccagcccactaagggctggtgc 45009 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 29697 caccagcccactaagggctggtg 29675 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 36804 caccagcccactaagggctggtg 36782 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 122389 caccagcccactaagggctggtg 122367
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 278 bits (140), Expect = 3e-71 Identities = 257/292 (88%), Gaps = 3/292 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| | ||| Sbjct: 243428 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacctgatttact 243369 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| |||||| || Sbjct: 243368 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctccg 243309 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct: 243308 aagatcttatcggttgaacctcagtgtcaaggattcatataatcccgtatgtcattccct 243249 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 243248 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatcggcatacctatttca 243189 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||| |||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 243188 atctcgtttaccagcaagtctctttactcgttccgtaatacaagatcccgtg 243137 Score = 278 bits (140), Expect = 3e-71 Identities = 257/292 (88%), Gaps = 3/292 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 250227 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagtgact 250168 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| |||||| || Sbjct: 250167 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctccg 250108 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct: 250107 aagatcttatcggttgaacctcagtgtcaaggattcatataatcccgtatgtcattccct 250048 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 250047 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatcggcatacctatttca 249988 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||| ||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 249987 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccgtg 249936 Score = 272 bits (137), Expect = 2e-69 Identities = 256/292 (87%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 173610 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 173669 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 173670 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 173729 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct: 173730 aagatcttatcgtttgaacctcagtgtcaaggattcatataatcccgtatgtcattccct 173789 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 173790 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttcg 173849 Query: 675 atctcg--ttaccaacaagtatctttactcgttctgtaatacaagatcccgt 724 |||||| ||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 173850 atctcgttttaccggcaagtctctttactcgttccgtaatacaagatcccgt 173901 Score = 266 bits (134), Expect = 1e-67 Identities = 254/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 231276 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 231335 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 231336 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 231395 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 231396 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 231455 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 231456 ttgtccttcggtatgttacttgcccgagattcgatcatcagtatccgcatacctatttca 231515 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 231516 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 231565 Score = 266 bits (134), Expect = 1e-67 Identities = 254/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| | ||||||||||| ||||| | |||||||| || ||| Sbjct: 237130 gaaccttaagtgtgcagaccctacgggttcgagaactatgtagacatgacccgagagact 237189 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 237190 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 237249 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 237250 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 237309 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 237310 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 237369 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 237370 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 237419 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 188204 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 188145 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 188144 ccacggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 188085 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || ||| ||| |||||||| ||| | ||||| ||||||||| Sbjct: 188084 aagatcttatcgtttgaaccttagtgccaaggattcgtataaccccgtatgtcattccct 188025 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 188024 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 187965 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 187964 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 187915 Score = 240 bits (121), Expect = 6e-60 Identities = 252/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||| ||||||||| ||||| | |||||||| || ||| Sbjct: 166837 gaaccttaagtgtgcagaccgtgctggttcgagaactatgtagacatgacccgagagact 166896 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 166897 cctcggtcaatatccaatagcgtgacctggatgcccatattggatcctacatattctacg 166956 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 166957 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 167016 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||| ||| || |||| ||||||||||||| Sbjct: 167017 ttgtccttcggtatgttacttgcccgagattctatcatcagtatccgcatacctatttca 167076 Query: 675 atctcg--ttaccaacaagtatctttactcgttctgtaatacaagatcccgt 724 |||||| ||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 167077 atctcgttttaccggcaagtctctttactcgttccgtaatacaagatcccgt 167128 Score = 230 bits (116), Expect = 6e-57 Identities = 250/290 (86%), Gaps = 6/290 (2%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 |||||| || |||||||||| || |||||||||| ||||| | |||||||| || ||| Sbjct: 145624 gaacctgaagtgtgcagaccctgtgggttcgagaactatgtagacatgacccgagagact 145565 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 145564 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 145505 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 | |||||||||| || |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 145504 a---tcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 145448 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 145447 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 145388 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 145387 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 145338 Score = 230 bits (116), Expect = 6e-57 Identities = 250/290 (86%), Gaps = 6/290 (2%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 |||||| || |||||||||| || |||||||||| ||||| | |||||||| || ||| Sbjct: 152422 gaacctgaagtgtgcagaccctgtgggttcgagaactatgtagacatgacccgagagact 152363 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 152362 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 152303 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 | |||||||||| || |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 152302 a---tcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 152246 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 152245 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 152186 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 152185 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 152136 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| ||||||||| |||||||||| ||||| Sbjct: 152547 tcctatatatcaatcttcatttccggaccattccggaaacccttgtgacgtccgtgatct 152488 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 152487 catccgggactccgaacaacattcggtaaccaac 152454 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 579 tgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcc 638 ||||||||||| | | |||||||||| |||||||||||| | ||| | || ||||| Sbjct: 46875 tgtcaaggattcaataaatctcgtatgcaattccctttgtctatcggtacgatacttgcc 46816 Query: 639 cgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatcttt 698 |||||||||||||| | |||| |||||||| |||||||| |||||| ||||| ||||| Sbjct: 46815 cgagattcgatcgttggtatccccataccttgttcaatcttgttaccggcaagtctcttt 46756 Query: 699 actcgttc 706 |||||||| Sbjct: 46755 actcgttc 46748 Score = 77.8 bits (39), Expect = 5e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| ||| || Sbjct: 188306 cggaccattccggaaaccctcgtgacgtccgtgatctcatccgggactccgaacaacatt 188247 Query: 395 ctgttaccaac 405 | || |||||| Sbjct: 188246 cggtaaccaac 188236 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 ||||||||| || | ||||| | |||| ||||| ||||||||||||||||||| ||||| Sbjct: 145749 tcctatataacaatcttcatttccggaccattccagaaaccctcgtgacgtccgtgatct 145690 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 145689 catccgggactccgaacaacattcggtaaccaac 145656 Score = 73.8 bits (37), Expect = 8e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 341 attctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtta 400 |||| |||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || | Sbjct: 237034 attccggaaaccctcgtgacgtccgtgatctcatccgggactccgaacaacattcggtaa 237093 Query: 401 ccaac 405 ||||| Sbjct: 237094 ccaac 237098 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| ||||| |||||||||||||| ||||| Sbjct: 173485 tcctatatatcaatcttcgtttccggaccattccggaaagcctcgtgacgtccgtgatct 173544 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||||| |||||| ||| ||| ||| || |||||| Sbjct: 173545 catccaggactccgaacaacattcggtaaccaac 173578 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||| ||||||||||||||||| || ||||| Sbjct: 231151 tcctatatatcaatcttcgtttccggactattccggaaaccctcgtgacgttcgtgatct 231210 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 231211 catccgggactccgaacaacattcggtaaccaac 231244 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||| ||||| ||||||||||| || ||||||||||||||||| ||| ||| || Sbjct: 166735 cggaccattccggaaagcctcgtgacgttcgtgatctcatccgggactccgaacaacatt 166794 Query: 395 ctgttaccaac 405 | || |||||| Sbjct: 166795 cggtaaccaac 166805 Score = 58.0 bits (29), Expect = 5e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| ||| | |||||| ||||||||| ||||| |||| Sbjct: 159530 ttgcccgagattcgatcgtcggtatacctataccttgttcaatctcattaccggtaagtc 159589 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 159590 tctttactcgttc 159602 Score = 58.0 bits (29), Expect = 5e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 |||||||||||| |||||||| ||| | |||||| ||||||||||||||| |||| Sbjct: 174978 ttgcccgagatttgatcgtcggtatacctataccttgttcaatctcgttaccggtaagtc 175037 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 175038 tctttactcgttc 175050 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||| ||||||||||||| Sbjct: 159246 cctcgtgacgtccgggatatcatccgggactc 159277 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||| ||||||||||||||||||||||| Sbjct: 174694 cctcgtgatgtccgggatctcatccgggactc 174725 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||| |||||||||||| ||||| ||| ||| ||| || |||||| Sbjct: 243513 cctcgtgacgtcctggatctcatccgagactccgaacaacattcggtaaccaac 243460 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgc 182 |||||||||||||||||||||||| Sbjct: 145905 caccagcccactaagggctggtgc 145882 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||||||||||||||||| ||||||| Sbjct: 231001 caccagcccactaagggctggtgtgccaccct 231032 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||||||||||||||||| ||||||| Sbjct: 236855 caccagcccactaagggctggtgtgccaccct 236886 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 188481 caccagcccactaagggctggtg 188459 Score = 44.1 bits (22), Expect = 0.72 Identities = 46/54 (85%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||| ||| |||||||||||| ||||| ||| ||| ||| || |||||| Sbjct: 250312 cctcgtgacatcctggatctcatccgagactccgaacaacattcggtaaccaac 250259
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 278 bits (140), Expect = 3e-71 Identities = 319/376 (84%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 48101 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 48042 Query: 372 catccgggactctgaaaaaccttctgttaccaacatcaataattcaactataccgaaaca 431 ||| | |||||| ||| ||||||| |||||||||| |||| |||||||||| ||||| Sbjct: 48041 catacaggactccgaacaaccttcggttaccaacacatataactcaactatactaaaaca 47982 Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-ag 490 ||| ||||||||| |||||||||| ||| ||||||||| ||||| | |||||||| || Sbjct: 47981 tcatcgaaccttaagtgtgcagaccctgcaggttcgagaactatgtagacatgacccgag 47922 Query: 491 gcactctccggtcaatatccaatagttggacctggatgcccatattggatcctacttatt 550 |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 47921 acacttctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatatt 47862 Query: 551 ctacgaagatcttatc-gttgagcctctgtgtcaaggatttagttaatctcgtatatcat 609 ||| |||||||||||| ||||| |||| ||| |||||||| | ||||| ||||| |||| Sbjct: 47861 ctatgaagatcttatcggttgaacctcagtgccaaggattcatataatcccgtatgtcat 47802 Query: 610 tccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccataccta 669 || ||||||||| ||| |||| ||||| ||||||||||||||| ||| ||||||||| Sbjct: 47801 tcgatttgtccttcggtacgttacttgcctgagattcgatcgtcggcatcaccataccta 47742 Query: 670 tttcaatctcgttacc 685 ||||||||||||||| Sbjct: 47741 gttcaatctcgttacc 47726 Score = 266 bits (134), Expect = 1e-67 Identities = 254/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||| ||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 100632 gaaccttaagtgtgcaaaccctgcgggttcgagaactatgcagacatgacccgagagact 100573 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 100572 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 100513 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 100512 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 100453 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 100452 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccacatacctatttca 100393 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 100392 atctcgcttaccggcaagtctctttactcgttccgtaatacaagatcccg 100343 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| || ||||||| |||||||||||| ||||| | |||||||| || ||| Sbjct: 97650 gaaccttaagtgcgcagaccccgcgggttcgagaactatgtagacatgacccgagagact 97591 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 97590 cctcggtcaatatcgaatagcgggacctggatgcccatattggatcccacatattctacg 97531 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct: 97530 aagatcttatcgtttgaacctcagtgtcaaggattcatataatcccgtatgtcattccct 97471 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 97470 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccacatacctatttca 97411 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 97410 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 97361 Score = 242 bits (122), Expect = 2e-60 Identities = 248/286 (86%), Gaps = 3/286 (1%) Strand = Plus / Minus Query: 441 cttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcactctcc 499 ||||| |||||||||| ||||||||||||| ||||| | |||||||| || |||| | Sbjct: 26123 cttaagtgtgcagaccctgcgggttcgagaactatggagacatgacccgagtgactcctc 26064 Query: 500 ggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaaga 559 |||||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||| Sbjct: 26063 ggtcaatatccaatagcgggacctggatgcccatactggatcccacatattctacgaaga 26004 Query: 560 tcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccctttgt 618 |||||||||| || |||| ||| |||||||| | ||||| ||||| |||||||||| || Sbjct: 26003 tcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattcccttcgt 25944 Query: 619 cctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatct 678 |||| |||||||| |||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 25943 ccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttcaatct 25884 Query: 679 cg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 || ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 25883 cgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 25838 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 91205 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 91264 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 91265 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 91324 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||| | |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 91325 aagatcttatagtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 91384 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||| ||||||| |||| ||||||||||||| Sbjct: 91385 ttgtccttcggtatgttacgtgcccgagatttgatcgtcagtatccgcatacctatttca 91444 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 91445 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 91494 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||| ||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 88710 gaaccttaagtgtgcacaccctgcgggttcgagaactatgtagacatgacccgagagact 88651 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||||||||||||||||||||| || ||||||| | Sbjct: 88650 cctcggtcaatatccaatagcgggacctggatgcccatattggatcccacatattctatg 88591 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || |||| |||||||||||| | || || ||||| |||||||| Sbjct: 88590 aagatcttatcgtttgaacctcagtgtcaaggattcatatactcccgtatgccattccct 88531 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 88530 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccacatacctatttca 88471 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| |||||||| |||| |||||||||||||||| Sbjct: 88470 atctcgtttaccggcaagtctctttacttgttccgtaatacaagatcccg 88421 Score = 87.7 bits (44), Expect = 5e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 661 ccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatc 720 |||||||||||||||||||| |||| |||||| ||||||||||||| ||||||||||||| Sbjct: 47718 ccatacctatttcaatctcgctaccgacaagtctctttactcgttccgtaatacaagatc 47659 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 88835 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 88776 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 88775 catccgggactccgaacaacattcggtaaccaac 88742 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 91080 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 91139 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 91140 catccgggactccgaacaacattcggtaaccaac 91173 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 97775 tcctatatatcaatcttcgtttccggatcattccggaaaccctcgtgacgtccgtgatct 97716 Query: 372 catccgggact 382 |||| |||||| Sbjct: 97715 catctgggact 97705 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 1330 cctcgtgacgtccgggatctcatccgggactc 1299 Score = 63.9 bits (32), Expect = 8e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 ||||| |||||||||||||||||||| ||||||||| ||||||| Sbjct: 26224 cattccggaaaccctcgtgacgtccgtgatctcatctgggactc 26181 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 56868 cctcgtgacgtccgggatctcatccgggactc 56899 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||| |||||||||| ||||| Sbjct: 100757 tcctatatatcaatcttcgtttccggaccattccagaaacccttgtgacgtccgtgatct 100698 Query: 372 catccgggactc 383 ||| |||||||| Sbjct: 100697 catacgggactc 100686 Score = 50.1 bits (25), Expect = 0.012 Identities = 61/73 (83%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 |||||||||||||||||||| ||| | |||||| ||||||||||||| | |||| Sbjct: 1046 ttgcccgagattcgatcgtccgtatacctataccttgttcaatctcgttatcggtaagtc 987 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 986 tctttactcgttc 974 Score = 50.1 bits (25), Expect = 0.012 Identities = 61/73 (83%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 |||||||||||||||||||| ||| | |||||| ||||||||||||| | |||| Sbjct: 57152 ttgcccgagattcgatcgtccgtatacctataccttgttcaatctcgttatcggtaagtc 57211 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 57212 tctttactcgttc 57224 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||||||||||||||||| ||||||| Sbjct: 88985 caccagcccactaagggctggtgtgccaccct 88954 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||||||||||||||||| ||||||| Sbjct: 97925 caccagcccactaagggctggtgtgccaccct 97894 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 26402 caccagcccaccaagggctggtgcgccaccc 26372
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 276 bits (139), Expect = 1e-70 Identities = 256/291 (87%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||| |||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 144481 gaaccttaagtgtgctgaccctgcgggttcgagaactatgtagacatgacccgagagact 144540 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 144541 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 144600 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 144601 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 144660 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 144661 ttgtccttcggtatgttacttgcccgagattcgatcgtcggtatccgcatacctatttca 144720 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgt 724 |||||| ||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 144721 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccgt 144771 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||| |||||| ||||| | |||||||| || ||| Sbjct: 19186 gaaccttaagtgtgcagaccctgcgggctcgagaactatgtagacatgacccgagtgact 19245 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| Sbjct: 19246 cctcggtcaatatccaatagcgggacctggctgcccatattggatcctacatattctacg 19305 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| || |||||||| | ||||| ||||| ||||||||| Sbjct: 19306 aagatcttatcgtttgaacctcactgccaaggattcatataatcccgtatgtcattccct 19365 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 19366 ttgtccttcagtatgttatttgcccgagattcgatcgtcagtatccgcatacctatttca 19425 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 19426 atctcgtttaccggcaagtctctttactcgttctgtaatacaagatcccg 19475 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| |||||| |||||| ||||| | |||||||| || ||| Sbjct: 36444 gaaccttaagtgtgcagaccctgcgggctcgagaactatgtagacatgacccgagtgact 36503 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 36504 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 36563 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| || | |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 36564 aagatcttatcgtttaaacctcagtgccaaggattcatataatcccgtatgtcattccct 36623 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 36624 ttgtccttcggtatgttatttgcccgagattcgatcgtcagtatccgcatacctatttca 36683 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 36684 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 36733 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 156820 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 156879 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 156880 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 156939 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 156940 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 156999 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 157000 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 157059 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 157060 atctcgtttactggcaagtctctttactcgttccgtaatacaagatcccg 157109 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||| | ||||||||||||| ||||| | |||||||| || ||| Sbjct: 22472 gaaccttaagtgtgcagatcctgcgggttcgagaactatgtagacatgacccgagagact 22531 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 22532 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 22591 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 22592 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 22651 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||| ||||||| |||||| ||||| ||||||||||||| Sbjct: 22652 ttgtccttcggtatgttacttgcctgagattcaatcgtcaatatccgcatacctatttca 22711 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||| | ||||||||||||| |||||||||||||||| Sbjct: 22712 atctcgtttaccggcaattctctttactcgttccgtaatacaagatcccg 22761 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 27960 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 28019 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 28020 cctcggtcaatatacaatagcgggacctggatgcccatattggatcctacatattctacg 28079 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 28080 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 28139 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| || |||||||||||||| || |||| ||||||||||||| Sbjct: 28140 ttgtccttcggtatgttacttccccgagattcgatcatcagtatccgcatacctatttca 28199 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 28200 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 28249 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 68415 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 68356 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 68355 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 68296 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||| | |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 68295 aagatcttattgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 68236 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 68235 ttgtccttcggtatgttacttgcccgagattcgatcatcagtatccgcatacctatttca 68176 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 68175 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 68126 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga-ccaaggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| || || ||| Sbjct: 75523 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgaaccgagagact 75464 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 75463 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 75404 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| || |||||||| ||||| ||||| ||||||||| Sbjct: 75403 aagatcttatcgtttgaacctcaatgccaaggattcgtataatcccgtatgtcattccct 75344 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 75343 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 75284 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||| ||||||||| Sbjct: 75283 atctcgtttaccggcaagtctctttactcgttccgtaatagaagatcccg 75234 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 136428 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 136487 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| Sbjct: 136488 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatatcctacg 136547 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| |||||| || Sbjct: 136548 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattctct 136607 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||||||| |||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 136608 ttgtcctttggtatgttacttgcccgagattcgatcatcagtatccgcatacctatttca 136667 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 136668 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 136717 Score = 236 bits (119), Expect = 9e-59 Identities = 248/287 (86%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 41293 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 41352 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||| ||||||||||||||||||| |||||| || Sbjct: 41353 cctcggtcaatatccaatagcgggacctggctgcccatattggatcctacatattctccg 41412 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 41413 aagatcttatcgtttgaacctcggtgccaaggattcatataatcccgtatgtcattccct 41472 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||| |||||||||||||| |||| ||||||||||||| Sbjct: 41473 ttgtccttcggtatgttacttgcctgagattcgatcgtcagtatccgcatacctatttca 41532 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatc 720 |||| | ||||| ||||| ||||||||||||| ||||||||||||| Sbjct: 41533 atcttgtttaccggcaagtctctttactcgttccgtaatacaagatc 41579 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||||||| ||||||||| ||| ||||| | |||||||| || ||| Sbjct: 101157 gaaccttaagcgtgcagaccctgcgggttctagaactatgtagacatgacccgagagact 101098 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 101097 cctcggtcaatatccaatagagggacctggatgcccatattggatcctacatattctacg 101038 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 101037 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 100978 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 100977 ttgtcctccggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 100918 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 | |||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 100917 acctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 100868 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 108288 gaaccttaagcgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 108229 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| Sbjct: 108228 cctcggtcaatatccaatagcgggatctggatgcccatattggatcctacatattctacg 108169 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 108168 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 108109 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 108108 ttgtcctccggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 108049 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 | |||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 108048 acctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 107999 Score = 232 bits (117), Expect = 1e-57 Identities = 249/289 (86%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 34764 gaaccttaagagtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 34823 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | Sbjct: 34824 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctatg 34883 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| || | ||| |||||||| | ||||| ||||| |||||||| Sbjct: 34884 aagatcttatcgtttgaaccccagtgccaaggattcatataatcccgtatgccattccct 34943 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 34944 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 35003 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatccc 722 || ||| ||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 35004 atatcgtttaccggcaagtctctttactcgttccgtaatacaagatccc 35052 Score = 226 bits (114), Expect = 9e-56 Identities = 249/290 (85%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||| ||||||||| ||||| | ||||||| || ||| Sbjct: 143321 gaaccttaagtgtgcagaccctgctggttcgagaactatgtaggcatgacccgagagact 143380 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| Sbjct: 143381 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatatcctacg 143440 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| |||||| || Sbjct: 143441 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattctct 143500 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 143501 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 143560 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| ||||||||||| |||| Sbjct: 143561 atctcgtttaccggcaagtctctttactcgttccgtaatacaagaacccg 143610 Score = 111 bits (56), Expect = 4e-21 Identities = 153/184 (83%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 222 cccctcccggtggaactctggatcccattcgtcactcccggtactttacctgcaatgtcc 281 |||||||||||| | || ||| ||||||||||| ||||||||| ||||| | |||| || Sbjct: 36230 cccctcccggtgaagatcgggaacccattcgtcattcccggtacattaccggtaatgccc 36289 Query: 282 gaaaacctttcggaagccaaaatggatacttcctatatatcagtattcatatacggagca 341 ||||||||| ||| | ||||| || | | |||||||||||| | ||| | | |||| || Sbjct: 36290 gaaaaccttccggtaaccaaa-tgaagtcatcctatatatcaatcttcgtttccggacca 36348 Query: 342 ttctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttac 401 ||| |||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || || Sbjct: 36349 ttccggaaaccctcgtgacgtccgtgatctcatccgggactccgaacaacattcggtaac 36408 Query: 402 caac 405 |||| Sbjct: 36409 caac 36412 Score = 95.6 bits (48), Expect = 2e-16 Identities = 151/184 (82%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 222 cccctcccggtggaactctggatcccattcgtcactcccggtactttacctgcaatgtcc 281 |||||||||||| | || ||| ||||||||||| ||||||||| ||||| | |||| || Sbjct: 18972 cccctcccggtgaagatcgggaacccattcgtcattcccggtacattaccggtaatgccc 19031 Query: 282 gaaaacctttcggaagccaaaatggatacttcctatatatcagtattcatatacggagca 341 ||||||||| ||| | ||||| || | | |||||||||||| | ||| | | |||| || Sbjct: 19032 gaaaaccttccggtaaccaaa-tgaagtcatcctatatatcaatcttcgtttccggacca 19090 Query: 342 ttctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttac 401 ||| |||||||||||||||||| | ||||||| ||||||||| ||| ||| ||| || || Sbjct: 19091 ttccggaaaccctcgtgacgtctgtgatctcacccgggactccgaacaacattcggtaac 19150 Query: 402 caac 405 |||| Sbjct: 19151 caac 19154 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| ||||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 68540 tcctatatatcaatattcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 68481 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||| ||||||| ||| ||| ||| || |||||| Sbjct: 68480 catctgggactccgaacaacattcggtaaccaac 68447 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 108413 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 108354 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 108353 catccgggactccgaacaacattcggtaaccaac 108320 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| || || ||||||||||||| |||||| ||||| Sbjct: 144356 tcctatatatcaatcttcatttccggaccactccggaaaccctcgtggcgtccgtgatct 144415 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||||||| ||| ||| || |||||| Sbjct: 144416 catccgggactctgaacaacattcggtaaccaac 144449 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 156695 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 156754 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 156755 catccgggactccgaacaacattcggtaaccaac 156788 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 27835 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 27894 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 27895 catccgggactc 27906 Score = 77.8 bits (39), Expect = 5e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 136303 tcctatatatcaatcttcgtttccggaccattcgggaaaccctcgtgacgtccgtgatct 136362 Query: 372 catccgggact 382 ||||||||||| Sbjct: 136363 catccgggact 136373 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 22347 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgatgtccgtgatct 22406 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 22407 catccgggactccgaacaacattcggtaaccaac 22440 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 101282 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgatgtccgtgatct 101223 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 101222 catccgggactccgaacaacattcggtaaccaac 101189 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| ||||||||||||||||||| ||||| Sbjct: 143196 tcctatatatcaatcttcgtttccggaccattcgggaaaccctcgtgacgtccatgatct 143255 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 143256 catccgggactccgaacaacattcggtaaccaac 143289 Score = 73.8 bits (37), Expect = 8e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 34669 cggaccattccggaaaccctcgtgacgtccgtgatctcatccgggactc 34717 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||| ||||||| ||||| Sbjct: 75648 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtcacgtccgtgatct 75589 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||| ||||||| ||| ||| ||| || |||||| Sbjct: 75588 catctgggactccgaacaacattcggtaaccaac 75555 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 136147 caccagcccactaagggctggtgcgccaccct 136178 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 143046 caccagcccactaagggctggtgcgccaccct 143077 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||||| | ||| | | | || ||||| ||||||||||||||| || | || Sbjct: 41165 acttcctatatatcaatcttcgtttccagaccattccggaaaccctcgtgacatctgtga 41224 Query: 369 tctcatccgggactc 383 |||||| |||||||| Sbjct: 41225 tctcatacgggactc 41239 Score = 50.1 bits (25), Expect = 0.012 Identities = 31/33 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccctt 191 ||||||||||||||||||||||| |||||||| Sbjct: 68689 caccagcccactaagggctggtgtgccaccctt 68657 Score = 50.1 bits (25), Expect = 0.012 Identities = 31/33 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccctt 191 ||||||||||||||||||||||| |||||||| Sbjct: 75798 caccagcccactaagggctggtgtgccaccctt 75766 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 27686 caccagcccactaagggctggtg 27708 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 34496 caccagcccactaagggctggtg 34518 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 101435 caccagcccactaagggctggtg 101413 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 108566 caccagcccactaagggctggtg 108544
>emb|Y18779.2|HMAY18779 Hordeum marinum BARE-1 long terminal repeat DNA (HMARD) Length = 1968 Score = 276 bits (139), Expect = 1e-70 Identities = 319/375 (85%), Gaps = 3/375 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||| ||||||||||||||||||||||| ||| || |||| || |||| ||| || Sbjct: 954 cctcgtgatgtccgggatctcatccgggactccgaacaaacttcggtcaccaccatacat 895 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || || || ||||||||| |||| |||| |||| |||||||||| ||||||||||||| Sbjct: 894 aactctacactaccgaaacgtcaccgaactttaagtgtgcagaccctgcgggttcgagaa 835 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| || ||| ||| ||||||||| ||||| | ||||||||| | | Sbjct: 834 ctatgtagacatgaccgagacacctctacggtcaataaccaatggcgggacctggacgtc 775 Query: 531 catattggatcctacttattctacgaagatctt-atcgtt-gagcctctgtgtcaaggat 588 || ||||| ||||| ||||||||||||||||| |||| | || ||||| ||||| |||| Sbjct: 774 cacattggttcctatatattctacgaagatctttatcggtcgaacctctatgtcagggat 715 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | |||||||| |||||| | |||||||||| ||| |||||||| ||||||||||||||| Sbjct: 714 tcagttaatcccgtataacgttccctttgttcttcggtatgttacttgcccgagattcga 655 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||||| |||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | Sbjct: 654 tcgtcggtatctccatacctagttcaacctcgttaccggcaagtctctttactcgttccg 595 Query: 709 taatacaagatcccg 723 ||||||||||||||| Sbjct: 594 taatacaagatcccg 580
>emb|Y18773.2|HROY18773 Hordeum roshevitzii BARE-1 long terminal repeat DNA (HROSB) Length = 1901 Score = 270 bits (136), Expect = 7e-69 Identities = 322/380 (84%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 ||||||||| |||||||||||||||||||||| ||| ||||||| || |||| ||| || Sbjct: 953 cctcgtgacatccgggatctcatccgggactccgaataaccttcggtcaccaccatacat 894 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || || | ||| ||||| |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 893 aactctatactactgaaacgtcaccgaaccttaagtgtgcagaccctgcgggttcgagaa 834 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| | ||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 833 ctatgtagacatgaccgaaacacctctacggtcaataaccaatagcgggacctggatgcc 774 Query: 531 catattggatcctacttattctacgaagatctt-atcg-ttgagcctctgtgtcaaggat 588 |||||||| |||||| ||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 773 catattggttcctacatattctatgaagatcttcatcggttgaacctctatgtcaaggat 714 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | | |||| | ||||| |||||||||| ||| |||||||| |||||||||||| || Sbjct: 713 tcaattaaccccgtatgctgttccctttgttcttcggtatgttacttgcccgagatttga 654 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 ||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||||||| | Sbjct: 653 tcgtctgtatctctatacctagttcaatctcgttaccggcaagtctctttactcgttccg 594 Query: 709 taatacaagatcccgtggct 728 ||| |||||||||||||||| Sbjct: 593 taagacaagatcccgtggct 574
>emb|Y18771.2|HVUY18771 Hordeum vulgare BARE-1 long terminal repeat DNA (HVULE) Length = 1812 Score = 268 bits (135), Expect = 3e-68 Identities = 333/394 (84%), Gaps = 5/394 (1%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| ||||| ||||| |||||||| ||| | ||||||||||||||||| ||| ||| || Sbjct: 946 cggaccattccggaaatcctcgtgatgtctgtgatctcatccgggactccgaacaacatt 887 Query: 395 ctgttacca-acatcaataattcaactataccgaaacatcacggaaccttaactgtgcag 453 | || |||| |||| |||| |||||||||| ||||||| ||||||||| ||||||| Sbjct: 886 cggtaaccacacat--ataactcaactatactaaaacatcgtcgaaccttaagtgtgcag 829 Query: 454 accttgcgggttcgagagctatgaatacatgaccaaggcactctccggtcaatatccaat 513 ||| || |||||||||| ||||| | ||||| || |||||||| ||||||||||||||| Sbjct: 828 accgtgtgggttcgagaactatgtagacatgcccgaggcactcctcggtcaatatccaat 769 Query: 514 agttggacctggatgcccatattggatcctacttattctacgaagatcttatcg-ttgag 572 || ||||||||||||||||||||||||||| |||||| | || | ||||||| |||| Sbjct: 768 agcgcgacctggatgcccatattggatcctacatattctccaaataacttatcggttgaa 709 Query: 573 cctctgtgtcaagg-atttagttaatctcgtatatcattccctttgtcctttcgtatgtt 631 ||| ||||||||| ||| | ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 708 cctgagtgtcaagggattcatataatcccgtatgtcattccctttgtccttaggtatgtt 649 Query: 632 agttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaag 691 | ||||||||||||||||||||| |||| |||||||||||| |||| ||| || ||||| Sbjct: 648 acttgcccgagattcgatcgtcggtatccgcatacctatttccatcttgttgccgacaag 589 Query: 692 tatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||| || ||||||||||||||| Sbjct: 588 tctctttactcgttccgttatacaagatcccgtg 555
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 266 bits (134), Expect = 1e-67 Identities = 254/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 66319 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 66378 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 66379 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 66438 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 66439 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 66498 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||| ||||||||||||||| |||| ||||||||||||| Sbjct: 66499 ttgtccttcggtatgttacttgctcgagattcgatcgtcagtatccgcatacctatttca 66558 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 66559 atctcgtttaccggcaagtctctttactcgttctgtaatacaagatcccg 66608 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 66194 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 66253 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 66254 catccgggactccgaacaacattcggtaaccaac 66287 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 66044 caccagcccactaagggctggtgcgccaccct 66075 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 tcgtgacgtccgggatctcatccgggactc 383 |||||| ||||||||||||||||||||||| Sbjct: 58200 tcgtgatgtccgggatctcatccgggactc 58171
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 266 bits (134), Expect = 1e-67 Identities = 257/292 (88%), Gaps = 7/292 (2%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca---aggca 493 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| |||| Sbjct: 6472 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagaggct 6531 Query: 494 ctctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattcta 553 |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 6532 -tctc-ggtcaatatccaatagcgggacctggatgcccatattggatcctacatattcta 6589 Query: 554 cgaagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattcc 612 |||||||||||||||| || |||| |||||||||||| | ||||| ||||| ||||||| Sbjct: 6590 cgaagatcttatcgtttgaacctcagtgtcaaggattcatataatcccgtatgtcattcc 6649 Query: 613 ctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctattt 672 |||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 6650 ctttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctattt 6709 Query: 673 caatctcgttacc-aacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 6710 caatctcgttaccgggcaagtctctttactcgttccgtaatacaagatcccg 6761 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 6347 tcctatatatcaatcttcatttccggaccattccggaaaccctcgtgacgtccgtgatct 6406 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||| ||||| ||| ||| ||| || |||||| Sbjct: 6407 catccgagactccgaacaacattccgtaaccaac 6440 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 6198 caccagcccactaagggctggtgcgccaccct 6229
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 262 bits (132), Expect = 2e-66 Identities = 254/291 (87%), Gaps = 4/291 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 57554 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 57613 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 57614 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 57673 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | |||| ||||| ||||||||| Sbjct: 57674 aagatcttatcgtttgaacctcagtgccaaggattcatacaatcccgtatgtcattccct 57733 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 57734 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 57793 Query: 675 atctcg--ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 57794 atctcgttttaccggcaagtctctttactcgttccgtaatacaagatcccg 57844 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| | |||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 31529 gaaccttaagtttgcagaccctgcgggttcgagaactatgtagacatgacccgagtgact 31588 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 31589 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 31648 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 31649 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 31708 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 31709 ttgtccttcgctatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 31768 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 31769 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 31818 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 22064 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 22005 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 22004 cctcggtcaatatccaatagcgggacctggatgcccatattggatccgacatattctacg 21945 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| ||| ||| || ||||| | ||||||||||| ||||||||| Sbjct: 21944 aagatcttatcgtttgaaccttagtgccagggattcatataatctcgtatgtcattccct 21885 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 21884 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 21825 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 || ||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 21824 atatcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 21775 Score = 242 bits (122), Expect = 2e-60 Identities = 251/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||| ||| ||||| | |||||||| || ||| Sbjct: 14956 gaaccttaagtgtgcagaccctgcgggttcaagaactatgtagacatgacccgagagact 14897 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 14896 cctcggtcaatatccaatagcgggacctggatgcccatattggatccgacatattctacg 14837 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| ||| ||| || ||||| | ||||||||||| ||||||||| Sbjct: 14836 aagatcttatcgtttgaaccttagtgccagggattcatataatctcgtatgtcattccct 14777 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 14776 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 14717 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 || ||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 14716 atatcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 14667 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | |||||| ||||| |||||||||||| ||||||| ||||| Sbjct: 31404 tcctatatatcaatcttcgtttacggaccattccggaaaccctcgtaacgtccgtgatct 31463 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||| |||||||||||| ||| ||| || |||||| Sbjct: 31464 catgcgggactctgaacaacattcggtaaccaac 31497 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 57429 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 57488 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 57489 catccgggactc 57500 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 15237 caccagcccactaagggctggtgcgccaccct 15206 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 22342 caccagcccactaagggctggtgcgccaccct 22311 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 347 gaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||| | ||||||| ||||||||||||||||| ||| ||| ||| || |||||| Sbjct: 15046 gaaaccctcataacgtccgtgatctcatccgggactccgaacaacattcggtaaccaac 14988 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 347 gaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||| | ||||||| ||||||||||||||||| ||| ||| ||| || |||||| Sbjct: 22154 gaaaccctcataacgtccgtgatctcatccgggactccgaacaacattcggtaaccaac 22096 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 31247 caccagcccaccaagggctggtgcgccaccc 31277 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 57272 caccagcccactaagggctggtg 57294
>emb|AJ582609.1|HEU582609 Hordeum euclaston retrotransposon BARE1 long terminal repeat DNA, clone HEUCD Length = 1951 Score = 262 bits (132), Expect = 2e-66 Identities = 321/380 (84%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||| |||| |||||||||||||||||| ||| ||||||| || |||| ||| || Sbjct: 951 cctcgtgatgtccaggatctcatccgggactccgaacaaccttcagtcaccaccatacat 892 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || || |||||||| |||| |||| ||||||||| ||||| |||| ||||||||||||| Sbjct: 891 aactctactataccaaaacgtcaccgaaccttaagtgtgcggaccctgcgggttcgagaa 832 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| || ||| ||| || ||||| ||||||| | ||||||||||| Sbjct: 831 ctatgtagacatgaccgagacacctctacgtccaataaccaatagcggaacctggatgcc 772 Query: 531 catattggatcctacttattctacgaagatctt-atcg-ttgagcctctgtgtcaaggat 588 |||||| | ||| || ||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 771 catattcgttcccacatattctatgaagatctttatcggttgaacctctatgtcaaggat 712 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | |||||||| ||||| | |||||||||| ||| |||||||| ||||||||||||||| Sbjct: 711 tcagttaatcccgtatgttgttccctttgttcttcggtatgttacttgcccgagattcga 652 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||| | |||||| ||||||| ||||||||| ||||| ||||| || |||||||||| | Sbjct: 651 tcgttggtatctctatacctagttcaatctcattaccggcaagtctcgttactcgttccg 592 Query: 709 taatacaagatcccgtggct 728 ||||||||||||| |||||| Sbjct: 591 taatacaagatcctgtggct 572
>gb|AF509771.1| Hordeum vulgare subsp. vulgare isolate NRG048 Rpg1 region, genomic sequence Length = 6190 Score = 260 bits (131), Expect = 7e-66 Identities = 251/287 (87%), Gaps = 3/287 (1%) Strand = Plus / Minus Query: 440 ccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcactctc 498 |||||| |||||||||| ||||||||||||| ||||| | |||||||| || |||| Sbjct: 1377 ccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagactcct 1318 Query: 499 cggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaag 558 |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1317 tggtcaatatccaatagcgggacctggatgcccatattggatcctacatattccacgaag 1258 Query: 559 atcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccctttg 617 ||||||||||| || |||| |||||||||||| ||||| ||||| |||||||||||| Sbjct: 1257 atcttatcgtttgaacctcagtgtcaaggattcgtataatcccgtatgtcattccctttg 1198 Query: 618 tcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatc 677 |||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||| Sbjct: 1197 tcctttggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttcaatc 1138 Query: 678 tcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 1137 tcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 1091
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 95898 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 95957 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 95958 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 96017 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 96018 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 96077 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 96078 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 96137 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 96138 atctcgtttactggcaagtctctttactcgttccgtaatacaagatcccg 96187 Score = 258 bits (130), Expect = 3e-65 Identities = 253/290 (87%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 102694 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 102753 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 102754 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 102813 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 102814 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 102873 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 102874 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 102933 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 102934 atctcgtttactggcaagtctctttactcgttccgtaatacaagatcccg 102983 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggc-act 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 144563 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgggagact 144622 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 144623 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 144682 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||| | ||||| ||||||||| Sbjct: 144683 aagatcttatcgtttgaacctcagtgccaaggattcatataaccccgtatgtcattccct 144742 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||| |||||| |||| ||||||||||||| Sbjct: 144743 ttgtccttcggtatgttacttgcccgagatttgatcgtgagtatccgcatacctatttca 144802 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 144803 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 144852 Score = 188 bits (95), Expect = 2e-44 Identities = 236/279 (84%), Gaps = 3/279 (1%) Strand = Plus / Minus Query: 441 cttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcactctcc 499 ||||| |||||| | | ||||||||||||| ||||| | |||||||| || ||||||| Sbjct: 47794 cttaaatgtgcacatcctgcgggttcgagaactatgtagacatgacctgagatactctcc 47735 Query: 500 ggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaaga 559 |||||||| |||||||| ||||||||||||||||| ||| |||||| ||||||||||||| Sbjct: 47734 ggtcaataaccaatagtgggacctggatgcccatactggctcctacatattctacgaaga 47675 Query: 560 t-cttatc-gttgagcctctgtgtcaaggatttagttaatctcgtatatcattccctttg 617 | ||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 47674 tgtttatcggttgaacctctatgtcaaggattcagttaatcccgtatgctgttccctttg 47615 Query: 618 tcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatc 677 ||| | || ||||| ||||||||||||||||||||| |||||| ||||||| | ||||| Sbjct: 47614 tccatcggtgtgttacttgcccgagattcgatcgtcggtatctctatacctagtccaatc 47555 Query: 678 tcgttaccaacaagtatctttactcgttctgtaatacaa 716 |||| || ||| | |||||||||||||| |||||||| Sbjct: 47554 tcgtaactggcaactgtctttactcgttctataatacaa 47516 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 95773 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 95832 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 95833 catccgggactccgaacaacattcggtaaccaac 95866 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 102569 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 102628 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 102629 catccgggactccgaacaacattcggtaaccaac 102662 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||| ||||||||| ||||| Sbjct: 144438 tcctatatatcaatcttcgttttcggaccattccggaaaccctcctgacgtccgtgatct 144497 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 144498 catccgggactccgaacaacattcggtaaccaac 144531
>emb|AJ582610.1|HEU582610 Hordeum euclaston retrotransposon BARE1 long terminal repeat DNA, clone HEUCE Length = 1665 Score = 256 bits (129), Expect = 1e-64 Identities = 307/361 (85%), Gaps = 4/361 (1%) Strand = Plus / Minus Query: 365 gggatctcatccgggactctgaaaaaccttctgttaccaacatcaataattcaactatac 424 ||||| ||||||||||||| ||| ||||||| | |||| ||| |||| |||| ||| Sbjct: 764 gggatttcatccgggactccgaacaaccttcggccaccaccatacataactcaatactac 705 Query: 425 cgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatg 484 |||||| |||| ||||| ||| ||||||||||| |||||||||||| ||||| | ||||| Sbjct: 704 cgaaacgtcaccgaaccataagtgtgcagacct-gcgggttcgagaactatgtagacatg 646 Query: 485 accaaggcac-tctccggtcaatatccaatagttggacctggatgcccatattggatcct 543 ||| || ||| ||| ||||||||| |||||||| || |||||||||||||||||| |||| Sbjct: 645 accgagacacctctacggtcaataaccaatagtgggtcctggatgcccatattggttcct 586 Query: 544 acttattctacgaagatctt-atcg-ttgagcctctgtgtcaaggatttagttaatctcg 601 || ||||||| |||||||| |||| |||| ||||| ||||||||||| |||||||| || Sbjct: 585 acatattctagaaagatctttatcggttgaacctctatgtcaaggattcagttaatcccg 526 Query: 602 tatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctc 661 || || |||||||||| ||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 525 tacatttttccctttgttcttcggtatgttacttgcccgagattcgatcgtcaatatctc 466 Query: 662 catacctatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcc 721 ||||||| |||||||||||||||| ||||| ||||||| | ||| ||||||||||||| Sbjct: 465 tatacctacttcaatctcgttaccagcaagtctctttacgcattccataatacaagatcc 406 Query: 722 c 722 | Sbjct: 405 c 405 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 161 ccagcccactaagggctggtgcaccaccc 189 ||||||||||||||||| ||||| ||||| Sbjct: 942 ccagcccactaagggctagtgcaacaccc 914
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 252 bits (127), Expect = 2e-63 Identities = 254/291 (87%), Gaps = 4/291 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 24998 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 25057 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 25058 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 25117 Query: 556 aagatc-ttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccc 613 |||||| |||||| |||| |||| ||| |||||||| ||||| ||||| |||||||| Sbjct: 25118 aagatctttatcgtttgaacctcagtgccaaggattggtataatcccgtatgtcattccc 25177 Query: 614 tttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttc 673 ||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 25178 tttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttc 25237 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 25238 aatctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 25288 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 64055 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 63996 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| Sbjct: 63995 cctcggtcaatatccaatagcgggacctgaatgcccatattggatcctacatattctacg 63936 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| | ||||| ||||| ||||| ||| Sbjct: 63935 aagatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcatttcct 63876 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||| ||||||||||||| |||| ||||||||||||| Sbjct: 63875 ttgtccttcggtatgttacttgcccaagattcgatcgtcagtatccgcatacctatttca 63816 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 63815 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 63766 Score = 226 bits (114), Expect = 9e-56 Identities = 249/290 (85%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 35534 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 35593 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| Sbjct: 35594 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattatacg 35653 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| ||| ||| || ||||| | ||||| ||||| ||||||||| Sbjct: 35654 aagatcttatcgtttgaaccttagtgccagggattcatataatcccgtatgtcattccct 35713 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| || ||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 35714 ttgtccttcggtgtgttacttgcccgagattcgatcgtcagaatccgcatacctatttca 35773 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||| ||||||||| |||||||||||||||| Sbjct: 35774 atctcgtttaccggcaagtctctatactcgttccgtaatacaagatcccg 35823 Score = 226 bits (114), Expect = 9e-56 Identities = 249/290 (85%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac-caaggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | ||||||| | || ||| Sbjct: 37573 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacacgagagact 37632 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||| Sbjct: 37633 cctcggtcaatatccattagcgggacctggatgcccatattggatcctacatattatacg 37692 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 | |||||||||||| || |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 37693 aggatcttatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 37752 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 37753 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 37812 Query: 675 atctcgtt-accaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||||| || |||| |||||| |||||| |||||||||||||||| Sbjct: 37813 atctcgtttactggtaagtctctttattcgttccgtaatacaagatcccg 37862 Score = 220 bits (111), Expect = 6e-54 Identities = 250/291 (85%), Gaps = 4/291 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 15923 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 15982 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 15983 cctcggtcaatatcaaatagcgggacctggatgcccatattggatcctacatattctacg 16042 Query: 556 aagatcttatcg-ttgagcctctgtgtcaa-ggatttagttaatctcgtatatcattccc 613 |||||||||||| |||| |||| ||| ||| ||||| | ||||| ||||| |||||||| Sbjct: 16043 aagatcttatcgtttgaacctcagtgccaagggattcatataatcccgtatgtcattccc 16102 Query: 614 tttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttc 673 ||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 16103 tttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttc 16162 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||| ||||| |||| |||||| || ||| |||||||||||||||| Sbjct: 16163 aatctcgtttaccggtaagtctctttaatcattccgtaatacaagatcccg 16213 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||||||||||||||||||||||||| ||||| Sbjct: 24873 tcctatatatcaatcttcgtttccggaccattctggaaaccctcgtgacgtccgtgatct 24932 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 24933 catccgggactccgaacaacattcggtaaccaac 24966 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 37448 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 37507 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 37508 catccgggactccgaacaacattcggtaaccaac 37541 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 64180 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 64121 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 64120 catccgggactccgaacaacattcggtaaccaac 64087 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 15798 tcctatatatcaatcttcgttttcggaccattccggaaaccctcgtgacgtccgtgatct 15857 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||||| |||||| ||| ||| ||| || |||||| Sbjct: 15858 catccaggactccgaacaacattcggtaaccaac 15891 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 ||||| |||||||||| ||| ||||| |||||||||||||| || ||| ||| ||| || Sbjct: 35437 cattccggaaaccctcatgatgtccgtgatctcatccgggattccgaacaacattcggta 35496 Query: 400 accaac 405 |||||| Sbjct: 35497 accaac 35502 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 35253 caccagcccactaagggctggtg 35275 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 64337 caccagcccactaagggctggtg 64315
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||| | |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 56083 gaaccttcagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 56142 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 56143 tctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 56202 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| ||| |||| |||||||||||| | ||||| | ||| ||||||||| Sbjct: 56203 aagatcttatcgtttggacctcagtgtcaaggattcatataatcccatatgtcattccct 56262 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| | |||||||||||| Sbjct: 56263 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccctatacctatttca 56322 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 56323 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 56372 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 |||||| || |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 48977 gaacctgaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 49036 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 49037 tctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 49096 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||| || |||| |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct: 49097 tagatcttaacgtttgaacctcagtgtcaaggattcatataatcccgtatgtcattccct 49156 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||| || |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 49157 ttgtcattcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 49216 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 49217 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 49266 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||||||||||||||||||||| ||| ||||| Sbjct: 48852 tcctatatatcaatcttcgtttccggaccattctggaaaccctcgtgacgcccgtgatct 48911 Query: 372 catccgggactc 383 |||| ||||||| Sbjct: 48912 catctgggactc 48923 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||| | | ||||| | |||| ||||| ||||||||||||||||| || ||||| Sbjct: 55958 tcctatatattaatcttcatttccggaccattccggaaaccctcgtgacgttcgtgatct 56017 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 56018 catccgggactc 56029 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||| ||||||||||||| ||||||| Sbjct: 48700 caccagcccagtaagggctggtgcgccaccct 48731 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccct 190 ||||||||| |||||||||||||| ||||||| Sbjct: 55808 caccagcccgctaagggctggtgcgccaccct 55839
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 73504 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 73563 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | || |||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 73564 cctcgatcaatatccaatagcaggacctggatgcccatattggatcctacatattctacg 73623 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 73624 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 73683 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 73684 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 73743 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 73744 atctcgtttactcgcaagtctctttactcgttctgtaatacaagatcccg 73793 Score = 226 bits (114), Expect = 9e-56 Identities = 250/290 (86%), Gaps = 4/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 66715 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 66774 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | || |||||||||||||| |||| ||||||||||||||||||||||| ||||||||| Sbjct: 66775 cctcgatcaatatccaatagcgggac-tggatgcccatattggatcctacatattctacg 66833 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||||| || |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 66834 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 66893 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 66894 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 66953 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| |||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 66954 atctcgtttactcgcaagtctctttactcgttccgtaatacaagatcccg 67003 Score = 214 bits (108), Expect = 3e-52 Identities = 250/291 (85%), Gaps = 6/291 (2%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| ||| ||| Sbjct: 108676 gaaccttaagtgtgcagaccgtgcgggttcgagaactatgtagacatgacccgagggact 108735 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | |||||||||| |||||| |||||||||||||||||||||||||||| ||||| | Sbjct: 108736 cctcggtcaatatacaatagcgggacctggatgcccatattggatcctacatattcca-- 108793 Query: 556 aagatctt-atcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccc 613 |||||||| |||| |||| |||| ||| |||||||| | ||||| ||||| |||||||| Sbjct: 108794 aagatctttatcggttgaacctcagtgccaaggattcatataatcccgtatgtcattccc 108853 Query: 614 tttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttc 673 ||||||||| |||||||| ||||| |||||||||||||| |||| |||||||||||| Sbjct: 108854 tttgtccttcggtatgttacttgcctgagattcgatcgtcagtatccgcatacctatttc 108913 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||| ||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 108914 aatctcgtttaccggcaagtctctttactcgttccataatacaagatcccg 108964 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 66590 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 66649 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 66650 catccgggactccgaacaacattcggtaaccaac 66683 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| ||||| | | ||| ||||| |||||||||||||||||||| ||||| Sbjct: 73379 tcctatatatcaatattcgtttctggaccattccggaaaccctcgtgacgtccgtgatct 73438 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 73439 catccgggactc 73450 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 347 gaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||||||||| |||| |||||||||||| ||| ||| ||| || |||||| Sbjct: 108586 gaaaccctcgtgacgtccgtgatcccatccgggactccgaacaacattcggtgaccaac 108644 Score = 58.0 bits (29), Expect = 5e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||||||| |||| | |||||| |||||| ||||||| Sbjct: 23581 gtatgatacttgcccgagattcgatcgtcggtatccctataccttgttcaatatcgttac 23522 Query: 685 c 685 | Sbjct: 23521 c 23521 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 66439 caccagcccactaagggctggtg 66461 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 73228 caccagcccactaagggctggtg 73250
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 61310 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 61369 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| Sbjct: 61370 cctcggtcaatatccaatagcgggacctggattcccatattggatcctacacattctacg 61429 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 ||||||||||| || || |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 61430 aagatcttatcatttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 61489 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 61490 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttca 61549 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 61550 atctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 61599 Score = 236 bits (119), Expect = 9e-59 Identities = 252/291 (86%), Gaps = 4/291 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 54545 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 54604 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| Sbjct: 54605 cctcggtcaatatccaatagcgggacctggattcccatattggatcctacacattctacg 54664 Query: 556 aagatcttatcgtt-gagcctctgtgtcaaggatttagttaatctc-gtatatcattccc 613 ||||||||||| || || |||| ||| |||||||| | ||||| | |||| |||||||| Sbjct: 54665 aagatcttatcatttgaacctcagtgccaaggattcatataatccccgtatgtcattccc 54724 Query: 614 tttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttc 673 ||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 54725 tttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgcatacctatttc 54784 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||| ||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 54785 aatctcgtttaccggcaagtctctttactcgttccgtaatacaagatcccg 54835 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 21606 cctcgtgatgtccgggatctcatccgggactctgaacaaccttc 21563 Score = 65.9 bits (33), Expect = 2e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||| | |||| | |||||| |||||||||||| || |||||| Sbjct: 21322 ttgcccgagattcgatcgtgg-tatccctataccttgttcaatctcgtttccgacaagtc 21264 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 21263 tctttactcgttc 21251 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||| |||||||||||||||||| ||| ||| ||| || |||||| Sbjct: 54460 cctcgtgacgtcctggatctcatccgggactccgaacaacattcggtaaccaac 54513 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||| |||||||||||||||||| ||| ||| ||| || |||||| Sbjct: 61225 cctcgtgacgtcctggatctcatccgggactccgaacaacattcggtaaccaac 61278
>emb|Y18770.2|HVUY18770 Hordeum vulgare BARE-1 long terminal repeat DNA (HVULD) Length = 1723 Score = 250 bits (126), Expect = 6e-63 Identities = 252/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 844 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 785 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 784 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 725 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| ||| ||| |||||||| | ||||| ||||| || |||||| Sbjct: 724 aagatcttatcgtttgaacctgagtgccaaggattcatataatcccgtatgtcgttccct 665 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 664 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 605 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 604 atctcgtttaccgacaagtctctttactcgttccataatacaagatcccg 555 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||| |||||||||||||||||||| ||||| Sbjct: 969 tcctatatatcaatcttcgtttccggacaattccggaaaccctcgtgacgtccgtgatct 910 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 909 catccgggactccgaacaacattcggtaaccaac 876
>emb|Z17327.1|HVBARE1 H.vulgare DNA for BARE-1 copia-like retroelement Length = 13271 Score = 244 bits (123), Expect = 4e-61 Identities = 255/295 (86%), Gaps = 3/295 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| ||| |||| Sbjct: 1177 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgaccgagggactc 1118 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||||||||| |||||| ||||||||||||| ||||||| |||||||||| Sbjct: 1117 ctcggtcaatatccaatagcgggaccttgatgcccatattgcatcctacatattctacga 1058 Query: 557 agatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||||||||| |||| |||| ||| |||||||| | ||||| ||||| |||||||||| Sbjct: 1057 agatcttatcgtttgaacctcagtggcaaggattcatataatcccgtatgtcattccctt 998 Query: 616 tgtcctttcgtatgttagttg-cccgagattcgatcgtcgatatctccatacctatttca 674 ||||||| ||||| || ||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 997 tgtccttcggtatggtacttgccccgagattcgatcgtcagtatccgcatacctatttca 938 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgtggct 728 |||| | ||||| ||||| |||||||| || | ||||||||||||||||||||| Sbjct: 937 atcttgtttaccggcaagtctctttacttgtcccgtaatacaagatcccgtggct 883 Score = 214 bits (108), Expect = 3e-52 Identities = 253/296 (85%), Gaps = 4/296 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||| ||||| ||||||||||||| ||||| | |||||||| ||| ||| Sbjct: 11416 gaaccttaagtgtgtagaccctgcgggttcgagaactatgtagacatgacccgagggact 11357 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | || |||||||||||||| |||||| ||| |||||||| |||||||| ||||||||| Sbjct: 11356 cctcgatcaatatccaatagcgggacctagatacccatatttgatcctacatattctacg 11297 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| ||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 11296 aagatcttatcgcttgaaccttagtgccaaggattcatataatcccgtatgtcattccct 11237 Query: 615 ttgtcctttcgtatgttagttg-cccgagattcgatcgtcgatatctccatacctatttc 673 |||||||| |||||||| ||| ||||||||||||||||| |||| |||||||||||| Sbjct: 11236 ttgtccttcggtatgttacttgccccgagattcgatcgtcagtatccgcatacctatttc 11177 Query: 674 aatctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccgtggct 728 ||||||| ||||| ||||| |||||||| || | ||||||||||||||||||||| Sbjct: 11176 aatctcgtttaccggcaagtctctttacttgtcccgtaatacaagatcccgtggct 11121 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||| ||||||||||||||| |||| ||||| Sbjct: 1302 tcctatatatcaatcttcattttcggaccatctcggaaaccctcgtgacatccgtgatct 1243 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 1242 catccgggactccgaacaacattcggtaaccaac 1209 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||| ||||||| | ||||| Sbjct: 11541 tcctatatatcaatcttcgtttccggaccattccggaaaccctcatgacgtctgtgatct 11482 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 11481 catccgggactccgaacaacattcggtaaccaac 11448 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 1457 caccagcccactaagggctggtg 1435 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 1367 cccattcgtcactcccggtac 1347 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 11606 cccattcgtcactcccggtac 11586
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 240 bits (121), Expect = 6e-60 Identities = 250/289 (86%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||| ||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 33919 gaaccttaagtgtgcacaccctgcgggttcgagaactatgtagacatgacccgagagact 33978 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 33979 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 34038 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||| ||||| Sbjct: 34039 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcactccct 34098 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||||| |||| | ||||||||||| Sbjct: 34099 ttgtccttcggtatgttacttgcccgagattcgatcgttagtatccgcgtacctatttca 34158 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatccc 722 |||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 34159 atctcgtttaccggcaagtctctttactcgttctgtaatacaagatccc 34207 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||||||| |||| ||||||| |||||||||||||| Sbjct: 96931 gtatgatacttgcccgagattcgatcgtcggtatccacataccttgttcaatctcgttac 96872 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtggct 728 | |||||| ||||||||||||| ||||||| ||||| ||||| Sbjct: 96871 cgacaagtctctttactcgttccataatacatcatcccatggct 96828 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | |||||| ||||| |||||||||||||||||||| ||||| Sbjct: 33794 tcctatatatcaatcttcgtttacggaccattccggaaaccctcgtgacgtccgtgatct 33853 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 33854 catccgggactc 33865 Score = 67.9 bits (34), Expect = 5e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||||| |||| | | |||| |||| |||| |||||||| |||||||| Sbjct: 97248 acttcctatatatcaatatttacttccggaccattttggagctcctcgtgatgtccggga 97189 Query: 369 tctcatccgggactctgaaaaacctt 394 ||||||||||||||| ||| |||||| Sbjct: 97188 tctcatccgggactccgaacaacctt 97163 Score = 58.0 bits (29), Expect = 5e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 159 caccagcccactaagggctggtgcaccaccctt 191 |||||||||||||||||||||||| |||||||| Sbjct: 33639 caccagcccactaagggctggtgcgccaccctt 33671
>emb|Y18781.2|HEUY18781 Hordeum euclaston BARE-1 long terminal repeat DNA (HEUCB) Length = 1782 Score = 240 bits (121), Expect = 6e-60 Identities = 321/381 (84%), Gaps = 5/381 (1%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||| ||||||||||||||||||||||| ||| |||| || || |||||||| || Sbjct: 953 cctcgtgatgtccgggatctcatccgggactccgaacaaccgtcggtcaccaacatacat 894 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || |||| ||| |||| |||| ||| |||| |||||||||| |||| ||||||| Sbjct: 893 aactcaatactactcaaacgtcaccaaacgttaagtgtgcagacccagcgg-ttcgagaa 835 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | ||||||||| | ||| ||| ||||||||| | ||||| ||||||||||||| Sbjct: 834 ctatgtagacatgaccatgacacctctacggtcaataactaatagcgggacctggatgcc 775 Query: 531 catattggatcctacttattctacgaagatctt-atcg-ttgagcctctgtgtcaaggat 588 |||||||| |||||| ||||||||||||||||| |||| ||| ||||| ||| |||||| Sbjct: 774 catattggttcctacatattctacgaagatctttatcggttggacctctatgttaaggat 715 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcg-tatgttagttgcccgagattcg 647 | |||||||| ||||| ||||||| || |||| ||||||| |||||||||||||| Sbjct: 714 tcagttaatcccgtatgctgttcccttggtttcttcggtatgttacttgcccgagattcg 655 Query: 648 atcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttct 707 ||||||| |||||| ||||||| ||||||||||||| | |||||||||||||||||||| Sbjct: 654 atcgtcggtatctctatacctagttcaatctcgttatcggcaagtatctttactcgttct 595 Query: 708 gtaatacaagatcccgtggct 728 ||||||||||||||| ||||| Sbjct: 594 gtaatacaagatcccatggct 574
>emb|AJ009760.1|HVU9760 Hordeum vulgare repetitive DNA sequence, clone pHv7161 Length = 486 Score = 238 bits (120), Expect = 2e-59 Identities = 203/228 (89%), Gaps = 2/228 (0%) Strand = Plus / Minus Query: 499 cggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaag 558 ||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||||| Sbjct: 427 cggtcaatatccaatagcgggacatggaagcccatattggatcctacatattctacgaag 368 Query: 559 atcttatcgtt-gagcctctgtgtcaaggatttagttaatctcgtatatcattccctttg 617 |||||||| || || |||| ||| |||||||| | ||||| ||||| |||||||||||| Sbjct: 367 atcttatcctttgaacctcagtgccaaggattcatataatcccgtatgtcattccctttg 308 Query: 618 tcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatc 677 ||||| |||||||| ||||||||||||||||||| | |||| ||||||||||||||||| Sbjct: 307 tccttcggtatgttacttgcccgagattcgatcgttggtatc-ccatacctatttcaatc 249 Query: 678 tcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 248 tcgttaccggcaagtctctttactcgttccgtaatacaagatcccgtg 201
>emb|Y18783.2|HPUY18783 Hordeum pusillum BARE-1 long terminal repeat DNA (HPUSA) Length = 1779 Score = 238 bits (120), Expect = 2e-59 Identities = 314/376 (83%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||||||| ||||||||||||| ||||| |||| | |||| || |||||||| || Sbjct: 950 cctcgtgacgtctgggatctcatccgagactccgaaacaacttcggtcaccaacatacat 891 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || ||||| | || || | |||| |||| |||| |||||||||| |||| |||||||| Sbjct: 890 aactcaacaaaacaaaatcgtcactgaacgttaagtgtgcagaccctgcgagttcgagaa 831 Query: 472 ctatgaatacatgaccaaggca-ctctccggtcaatatccaatagttggacctggatgcc 530 || || | ||||||||||| || |||| |||| |||| ||||||| |||||| |||||| Sbjct: 830 ctttgtagacatgaccaagacaactctacggttaataaccaatagcgggacctagatgcc 771 Query: 531 catattggatcctacttattctacgaagatcttatcgtt-gagcctctgtgtcaaggatt 589 |||||||| |||||| |||||||||||||| |||| | | || || | ||||||||||| Sbjct: 770 catattggttcctacatattctacgaagattttattggtcgaaccacgatgtcaaggatt 711 Query: 590 tagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgat 649 ||| |||| ||||| |||||||||||| | |||||||| |||||||||||||||| Sbjct: 710 tagacaatcccgtatgcagttccctttgtccatcggtatgttacttgcccgagattcgat 651 Query: 650 cgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgt 709 ||||| |||||||||||||| ||||||||| ||| || ||||| |||||||||||||||| Sbjct: 650 cgtcggtatctccatacctagttcaatctcattatcagcaagtctctttactcgttctgt 591 Query: 710 aatacaagatcccgtg 725 || | ||||||||||| Sbjct: 590 aacataagatcccgtg 575
>emb|Y18775.2|HROY18775 Hordeum roshevitzii BARE-1 long terminal repeat DNA (HROSD) Length = 1858 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||| ||||||||| ||||| | | |||||| || ||| Sbjct: 867 gaaccttaagtgtgcagaccctgctggttcgagaactatgtagatatgacccgagagact 808 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 807 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 748 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 ||||||| |||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 747 aagatctcatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 688 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||||| |||||||| || |||||||||| |||||| |||| ||||||||||||| Sbjct: 687 ttgtcctccggtatgttacttacccgagattcaatcgtcagtatccgcatacctatttca 628 Query: 675 atctcgtt-accaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||||| ||| |||||| ||||||||||||| |||||||||||||||| Sbjct: 627 atctcgttcaccgacaagtctctttactcgttccgtaatacaagatcccg 578 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 992 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 933 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 932 catccgggactccgaacaacattcggtaaccaac 899
>emb|Y18769.2|HVUY18769 Hordeum vulgare BARE-1 long terminal repeat DNA (HVULC) Length = 1830 Score = 234 bits (118), Expect = 4e-58 Identities = 250/290 (86%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||| ||||||||| ||||| | | |||||| || ||| Sbjct: 872 gaaccttaagtgtgcagaccctgctggttcgagaactatgtagatatgacccgagagact 813 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 812 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 753 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 ||||||| |||| |||| |||| ||| |||||||| | ||||| ||||| ||||||||| Sbjct: 752 aagatctcatcgtttgaacctcagtgccaaggattcatataatcccgtatgtcattccct 693 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||||| |||||||| || |||||||||| |||||| |||| ||||||||||||| Sbjct: 692 ttgtcctccggtatgttacttacccgagattcaatcgtcagtatccgcatacctatttca 633 Query: 675 atctcgtt-accaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||||| ||| |||||| ||||||||||||| |||||||||||||||| Sbjct: 632 atctcgttcaccgacaagtctctttactcgttccgtaatacaagatcccg 583 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 997 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 938 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 937 catccgggactccgaacaacattcggtaaccaac 904
>emb|Y18767.2|HVUY18767 Hordeum vulgare BARE-1 long terminal repeat DNA (HVULA) Length = 1807 Score = 234 bits (118), Expect = 4e-58 Identities = 252/290 (86%), Gaps = 5/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||||||||| |||||||||||| ||||| | |||||||| || ||| Sbjct: 870 gaaccttaagtgtgcagacct-gcgggttcgagaactatgtagacatgacccgagagact 812 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 811 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 752 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 751 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 692 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||| ||| |||||||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 691 ttgt-cttcggtatgttacttgcccgagattcgatcgttagtatccgcatacctatttca 633 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| ||||| ||||||||| |||||||||||||||||||| Sbjct: 632 atctcgtttaccggcaagtctctttactcattctgtaatacaagatcccg 583 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 1132 caccagcccactaagggctggtg 1110
>emb|AJ279072.1|HVU279072 Hordeum vulgare BARE-2 and partial BAGY-2 retrotransposons Length = 19906 Score = 234 bits (118), Expect = 4e-58 Identities = 251/290 (86%), Gaps = 4/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||||||||| |||||||||||| ||||| | |||||||| || ||| Sbjct: 4436 gaaccttaagtgtgcagacct-gcgggttcgagaactatgtagacatgacccgagagact 4378 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 4377 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 4318 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 4317 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 4258 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 4257 ttgtccttcggtatgttacttgcccgagattcgatcgttagtatccgcatacctatttca 4198 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||| | ||||| ||||||||||||| ||||||||| |||||| Sbjct: 4197 atctcgtttatcggcaagtctctttactcgttccgtaatacaaaatcccg 4148 Score = 218 bits (110), Expect = 2e-53 Identities = 250/290 (86%), Gaps = 5/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| ||||||||||| |||||||||||| ||||| | |||||||| || ||| Sbjct: 11240 gaaccttaagtgtgcagacct-gcgggttcgagaactatgtagacatgacccgagagact 11182 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 11181 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 11122 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||||||||| |||| |||| ||| |||||||| ||||| ||||| ||||||||| Sbjct: 11121 aagatcttatcgtttgaacctcagtgccaaggattcgtataatcccgtatgtcattccct 11062 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||| ||| |||||||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 11061 ttgt-cttcggtatgttacttgcccgagattcgatcgttagtatccgcatacctatttca 11003 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||| | ||||| ||||||||||||| ||||||||| |||||| Sbjct: 11002 atctcgtttatcggcaagtctctttactcgttccgtaatacaaaatcccg 10953 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 11365 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 11306 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 11305 catccgggactccgaacaacattcggtaaccaac 11272 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/96 (84%), Gaps = 2/96 (2%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga--t 369 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| || | Sbjct: 4563 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 4504 Query: 370 ctcatccgggactctgaaaaaccttctgttaccaac 405 |||||||||||||| ||| ||| ||| || |||||| Sbjct: 4503 ctcatccgggactccgaacaacattcggtaaccaac 4468
>emb|Y18768.2|HVUY18768 Hordeum vulgare BARE-1 long terminal repeat DNA (HVULB) Length = 1736 Score = 226 bits (114), Expect = 9e-56 Identities = 250/290 (86%), Gaps = 4/290 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgacca-aggcact 495 ||||||||| |||||||||| ||||||||||||| ||||| | |||||||| || ||| Sbjct: 841 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatgacccgagagact 782 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 781 cctcggtcaatatccaatagcgggacctggatgcccatattggatcctacatattctacg 722 Query: 556 aagatcttatcg-ttgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 |||||| ||||| |||| ||| ||| |||||||| | ||||| ||||| || ||||| Sbjct: 721 aagatc-tatcgtttgaacctgagtgccaaggattcatataatcccgtatgtcggtccct 663 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 |||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 662 ttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgtatacctatttca 603 Query: 675 atctcg-ttaccaacaagtatctttactcgttctgtaatacaagatcccg 723 |||||| ||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 602 atctcgtttaccgacaagtctctttactcgttccataatacaagatcccg 553 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 966 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 907 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 906 catccgggactccgaacaacattcggtaaccaac 873
>emb|Y18780.2|HEUY18780 Hordeum euclaston BARE-1 long terminal repeat DNA (HEUCA) Length = 1673 Score = 218 bits (110), Expect = 2e-53 Identities = 309/373 (82%), Gaps = 3/373 (0%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 |||||||| ||| |||| ||||||||||||| ||| ||||||| || ||||||| || Sbjct: 950 cctcgtgatgtctgggacatcatccgggactcggaacaaccttcagtcaccaacacatat 891 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 | |||| ||||||||| |||| |||| |||| |||||||| | ||||||||||||| Sbjct: 890 atctcaatactaccgaaacgtcaccgaacgttaagtgtgcagagcctgcgggttcgagaa 831 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | ||||| || || ||| ||| | |||||| ||||||| |||||| |||||| Sbjct: 830 ctatgtagacatgcccgagacacctctttgatcaataaccaatagcgggacctagatgcc 771 Query: 531 catattggatcctacttattctacgaagatctta--tcgttgagcctctgtgtcaaggat 588 |||||||| |||||| |||||||||||| | || | ||||| ||||| |||||||||| Sbjct: 770 catattggttcctacatattctacgaaggtatttattggttgaacctctatgtcaaggat 711 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | |||||||| ||||| | |||||||||| |||| |||||||| ||||||||||||| | Sbjct: 710 tcagttaatcccgtatgttgttccctttgttctttggtatgttacttgcccgagattcaa 651 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||||| |||||||||||||| ||||||||| ||||| |||| |||||||||||| | Sbjct: 650 tcgtcggtatctccatacctagttcaatctcattaccggaaagtctctttactcgtttcg 591 Query: 709 taatacaagatcc 721 ||||||||||||| Sbjct: 590 taatacaagatcc 578 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 ccagcccactaagggctggtgc 182 |||||||||||||||||||||| Sbjct: 1023 ccagcccactaagggctggtgc 1002
>emb|Y18785.2|HPUY18785 Hordeum pusillum BARE-1 long terminal repeat DNA (HPUSC) Length = 1902 Score = 202 bits (102), Expect = 1e-48 Identities = 310/374 (82%), Gaps = 4/374 (1%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 ||||||||| || |||||||||||||||||| ||| ||||||| || |||| ||| || Sbjct: 952 cctcgtgacatctaggatctcatccgggactccgaacaaccttcggtcaccaccattcat 893 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 || | ||||||||||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 892 aactttactataccgaaacgtcaccgaaccttaagagtgcagaccctgcgggttcgagaa 833 Query: 472 ctatgaatacatgaccaaggca-ctctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| || || |||| |||||||| | ||||| |||| |||||||| Sbjct: 832 ctatgtagacatgaccgagacacctctatggtcaataactaatagcaggacttggatgcc 773 Query: 531 catattggatcctacttattctacgaagatc-ttatc-gttgagcctctgtgtcaaggat 588 |||||||| ||| || || ||| | |||||| ||||| ||||| ||||| |||||||||| Sbjct: 772 catattggttcccacataatcttcaaagatctttatcggttgaacctctatgtcaaggat 713 Query: 589 ttagttaatctcgtatatcattccctttg-tcctttcgtatgttagttgcccgagattcg 647 | |||||||| ||||| | ||||||||| | ||| |||||||| || ||||||||||| Sbjct: 712 tcagttaatcccgtatgttgttccctttgtttcttcggtatgttactttcccgagattcg 653 Query: 648 atcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttct 707 |||||| |||||| |||| || |||||||| ||||| ||||| ||||||||||||| Sbjct: 652 gtcgtcggtatctctatacgtagttcaatcttgttactggcaagtctctttactcgttcc 593 Query: 708 gtaatacaagatcc 721 ||||||||||||| Sbjct: 592 ataatacaagatcc 579
>emb|AJ582608.1|HMA582608 Hordeum marinum retrotransposon BARE1 long terminal repeat DNA, clone HMARE Length = 1556 Score = 196 bits (99), Expect = 8e-47 Identities = 258/303 (85%), Gaps = 6/303 (1%) Strand = Plus / Minus Query: 425 cgaaacatcacggaaccttaactgtgca-gaccttgcgggttcgagagctatgaatacat 483 |||||| |||| |||||||| |||||| ||||| |||||||||||| ||||| | |||| Sbjct: 583 cgaaacgtcaccaaaccttaagtgtgcaagacct-gcgggttcgagaactatgtagacat 525 Query: 484 gaccaaggcac-tctccggtcaatatccaatagttggacctggatgcccatattggatcc 542 |||| || ||| | | ||||||||| ||||||| ||||||||||||||||||||| ||| Sbjct: 524 gaccgagacacctgtacggtcaataaccaatagcaggacctggatgcccatattggttcc 465 Query: 543 tact-tattctacgaagatctt-atcgtt-gagcctctgtgtcaaggatttagttaatct 599 ||| ||||||||||||||||| |||| | || ||||| ||||||||||| ||||||||| Sbjct: 464 tacgatattctacgaagatctttatcggtcgaacctctatgtcaaggattcagttaatct 405 Query: 600 cgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatc 659 | ||| |||||||||| ||| |||||||| |||| |||||||||||||||| |||| Sbjct: 404 catatgatgttccctttgttcttcggtatgttacttgcgcgagattcgatcgtcggtatc 345 Query: 660 tccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagat 719 |||||||| | ||||| ||||||||| ||||| ||||||||| ||| |||||||||||| Sbjct: 344 tccatacccagttcaacctcgttaccggcaagtctctttactcattccgtaatacaagat 285 Query: 720 ccc 722 ||| Sbjct: 284 ccc 282
>emb|Y18778.2|HMAY18778 Hordeum marinum BARE-1 long terminal repeat DNA (HMARC) Length = 1888 Score = 196 bits (99), Expect = 8e-47 Identities = 306/371 (82%), Gaps = 3/371 (0%) Strand = Plus / Minus Query: 356 gtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaataatt 415 |||| ||||||||||||||| ||||||| ||| ||||||| || |||| ||| |||| | Sbjct: 949 gtgatgtccgggatctcatctgggactccgaacaaccttcggtcaccaccatacataact 890 Query: 416 caactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagctat 475 | | ||||||||| |||| ||||||||| |||||||||| | |||||||||| ||| Sbjct: 889 ctccactaccgaaacgtcaccgaaccttaagtgtgcagaccctctgggttcgagaactac 830 Query: 476 gaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcccata 534 | | |||||||| | ||| ||| || ||||| |||| | |||||| || | ||| | Sbjct: 829 gtagacatgaccgaaacacctctatggccaataatcaatggcgggacctagacgtccaca 770 Query: 535 ttggatcctacttattctacgaagatctt-atcgtt-gagcctctgtgtcaaggatttag 592 || | |||||| ||||||||||||||||| |||| | |||||||| ||||||||||| || Sbjct: 769 ttcgttcctacatattctacgaagatcttcatcggtcgagcctctatgtcaaggattcag 710 Query: 593 ttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgt 652 |||||| |||||| | |||||||||| || |||||||| ||||||||||||||||||| Sbjct: 709 ttaatcccgtataacgttccctttgttctacggtatgttacttgcccgagattcgatcgt 650 Query: 653 cgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaat 712 || |||||||||||||| ||||| || |||||| ||||| ||||||||||||| |||| Sbjct: 649 cggtatctccatacctagttcaaccttgttaccggcaagtctctttactcgttccttaat 590 Query: 713 acaagatcccg 723 ||||||||||| Sbjct: 589 acaagatcccg 579 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 accagcccactaagggctggt 180 ||||||||||||||||||||| Sbjct: 1144 accagcccactaagggctggt 1124
>emb|Y18777.2|HMAY18777 Hordeum marinum BARE-1 long terminal repeat DNA (HMARB) Length = 1975 Score = 194 bits (98), Expect = 3e-46 Identities = 315/376 (83%), Gaps = 11/376 (2%) Strand = Plus / Minus Query: 354 tcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaataa 413 ||||||||||| |||||||||||||||||| ||| ||||||| || |||| ||| |||| Sbjct: 944 tcgtgacgtccaggatctcatccgggactccgaacaaccttcggtcaccaccatacataa 885 Query: 414 ttcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagct 473 || | ||| ||||| |||| ||| |||| |||||||||| ||||||||||||| || Sbjct: 884 ctctatactactgaaacgtcaccaaac-ttaagtgtgcagaccctgcgggttcgagaact 826 Query: 474 atgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgccca 532 ||| | |||||||| || ||| ||| || |||||| ||||||| |||||| |||||||| Sbjct: 825 atgtagacatgaccgagacacctctacg-tcaataaccaatagc-ggacctagatgccca 768 Query: 533 tattggatcctacttattctacgaagatcttatc--gttgagcctctgtgtcaaggattt 590 |||||| |||||| ||||||| ||||||||| | || || ||||| ||||| ||||| Sbjct: 767 tattgg-tcctacatattctatgaagatctttaccggtcgaacctctatgtcagggattc 709 Query: 591 agttaatctcgtatatcat-tccctttgtcctttcgtatgttagttgcccgagattcgat 649 |||||||| ||||| || |||||||||||| |||||||| |||||||||||||||| Sbjct: 708 agttaatcccgtatg--atgtccctttgtcctcg-gtatgttacttgcccgagattcgat 652 Query: 650 cgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgt 709 ||||| |||||||||||| | ||||| |||||||| ||||||||||||||||||| || Sbjct: 651 cgtcggtatctccatacccagttcaacctcgttactggcaagtatctttactcgttccgt 592 Query: 710 aatacaagatcccgtg 725 |||||||||||||||| Sbjct: 591 aatacaagatcccgtg 576
>emb|Y18784.2|HPUY18784 Hordeum pusillum BARE-1 long terminal repeat DNA (HPUSB) Length = 1792 Score = 182 bits (92), Expect = 1e-42 Identities = 313/380 (82%), Gaps = 5/380 (1%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaat 411 ||||||| ||||||||||| |||| |||||| ||| ||||||| || ||||||| || Sbjct: 950 cctcgtggcgtccgggatcagatccaggactccgaacaaccttcggtcaccaacacatat 891 Query: 412 aattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagag 471 | |||| ||||||||| |||| |||| |||| |||||||||| ||||||||||||| Sbjct: 890 atctcaatactaccgaaacgtcaccgaacattaagtgtgcagaccctgcgggttcgagaa 831 Query: 472 ctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcc 530 ||||| | |||||||| || ||| ||| |||||||| ||||||| | ||||||||||| Sbjct: 830 ctatgtagacatgaccgagacacctctatggtcaataaccaatagcggaacctggatgcc 771 Query: 531 catattggatcctacttattctacgaagatctt-atcg-ttgagcctctgtgtcaaggat 588 |||||||| || ||| |||||||| | ||||| || | |||| ||||| |||||||||| Sbjct: 770 catattggttc-tacatattctactagtatctttataggttgaacctctatgtcaaggat 712 Query: 589 ttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcga 648 | |||||||| |||| | |||||||||| ||| |||||||| || |||||||||| | Sbjct: 711 tcagttaatcctgtatgttgttccctttgttcttcagtatgttactttcccgagattcaa 652 Query: 649 tcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctg 708 |||||| |||||| ||||||| |||||||||||| ||||| ||||||||||||| | Sbjct: 651 tcgtcggtatctctatacctagttcaatctcgtt-tgggcaagtctctttactcgttccg 593 Query: 709 taatacaagatcccgtggct 728 |||||||||||||| ||||| Sbjct: 592 taatacaagatcccatggct 573 Score = 44.1 bits (22), Expect = 0.72 Identities = 40/46 (86%) Strand = Plus / Minus Query: 220 ggcccctcccggtggaactctggatcccattcgtcactcccggtac 265 |||||| ||||||||| | | ||| |||||||||||||| |||||| Sbjct: 1081 ggccccacccggtggacccccggaacccattcgtcactctcggtac 1036
>gb|DQ257563.1| Hordeum vulgare subsp. vulgare clone DsA1 flanking Ds insertion sequence Length = 960 Score = 178 bits (90), Expect = 2e-41 Identities = 222/262 (84%), Gaps = 3/262 (1%) Strand = Plus / Minus Query: 458 tgcgggttcgagagctatgaatacatgacca-aggcactctccggtcaatatccaatagt 516 ||||||||||||| ||||| | |||||||| || ||||||||||||||| |||||||| Sbjct: 847 tgcgggttcgagaactatgtagacatgacctgagatactctccggtcaataaccaatagt 788 Query: 517 tggacctggatgcccatattggatcctacttattctacgaagat-cttatc-gttgagcc 574 ||||||||||||||||| ||| |||||| |||||||||||||| ||||| ||||| || Sbjct: 787 gggacctggatgcccatactggctcctacatattctacgaagatgtttatcggttgaacc 728 Query: 575 tctgtgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagt 634 ||| ||||||||||| ||| |||| ||||| |||||||||||| | || ||||| | Sbjct: 727 tctatgtcaaggattcagtcaatcccgtatgctgttccctttgtccatcggtgtgttact 668 Query: 635 tgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtat 694 |||||||||||||||||||| |||||| ||||||| | ||||||||| || ||| | | Sbjct: 667 tgcccgagattcgatcgtcggtatctctatacctagtccaatctcgtaactggcaactgt 608 Query: 695 ctttactcgttctgtaatacaa 716 ||||||||||||| |||||||| Sbjct: 607 ctttactcgttctataatacaa 586
>emb|Y18776.2|HMAY18776 Hordeum marinum BARE-1 long terminal repeat DNA (HMARA) Length = 1879 Score = 178 bits (90), Expect = 2e-41 Identities = 258/310 (83%), Gaps = 3/310 (0%) Strand = Plus / Minus Query: 422 taccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatac 481 ||||||||| |||| |||||||| |||||| ||| ||||||||| ||| ||||| | || Sbjct: 876 taccgaaacgtcaccaaaccttaagtgtgcaaaccatgcgggttcaagaactatgtagac 817 Query: 482 atgaccaaggcac-tctccggtcaatatccaatagttggacctggatgcccatattggat 540 |||||| || ||| ||| ||||||||| ||||| | ||||||||||| ||| | ||| | Sbjct: 816 atgaccgagacacctctacggtcaataaccaatggcaggacctggatgtccacagtggtt 757 Query: 541 cctacttattctacgaagatctt-atcgttg-agcctctgtgtcaaggatttagttaatc 598 ||||| |||||||||||||| || |||| | | ||||| ||||||||||| ||||||| Sbjct: 756 cctacatattctacgaagatttttatcggtccaacctctatgtcaaggattcggttaatc 697 Query: 599 tcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatat 658 |||||| | |||||||||| ||| |||||||| ||||||||||||| |||||| ||| Sbjct: 696 ccgtataacgttccctttgttcttcggtatgttacttgcccgagattccatcgtccgtat 637 Query: 659 ctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaaga 718 ||||||||||| ||||| || ||||| ||||| ||| ||||||||| |||||||||| Sbjct: 636 ctccatacctagttcaaccttgttactggcaagtctctctactcgttccttaatacaaga 577 Query: 719 tcccgtggct 728 |||||||||| Sbjct: 576 tcccgtggct 567 Score = 46.1 bits (23), Expect = 0.18 Identities = 35/39 (89%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaa 390 |||||| | |||| |||||||||||||||||| |||||| Sbjct: 947 cctcgttaagtccaggatctcatccgggactccgaaaaa 909
>gb|U73173.1|HVU73173 Hordeum vulgare BARE-1 retrotransposon related-sequence Length = 4198 Score = 153 bits (77), Expect = 1e-33 Identities = 175/204 (85%), Gaps = 4/204 (1%) Strand = Plus / Minus Query: 341 attctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtta 400 |||| ||||||||||||||||||| |||||||||||||| | ||| ||| ||| || | Sbjct: 202 attccggaaaccctcgtgacgtccatgatctcatccgggagttcgaacaacattcggtaa 143 Query: 401 cca-acatcaataattcaactataccgaaacatcacggaaccttaactgtgcagaccttg 459 ||| |||| |||| |||||||||| |||||||| ||||||||| |||||||||| || Sbjct: 142 ccacacat--ataactcaactatactaaaacatcatcgaaccttaagtgtgcagaccctg 85 Query: 460 cgggttcgagagctatgaatacatgacca-aggcactctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| |||||||| ||||||||||||||||| | Sbjct: 84 cgggttcgagaactatgtagacatgacccgaggcactcctcggtcaatatccaatagcgg 25 Query: 519 gacctggatgcccatattggatcc 542 |||||||||||||||||||||||| Sbjct: 24 gacctggatgcccatattggatcc 1 Score = 115 bits (58), Expect = 2e-22 Identities = 116/134 (86%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 410 ataattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgag 469 |||| |||||||||| |||||||| ||||||||| |||||||||| |||||||||||| Sbjct: 4065 ataaatcaactatactaaaacatcatcgaaccttaagtgtgcagaccctgcgggttcgag 4124 Query: 470 agctatgaatacatga-ccaaggcactctccggtcaatatccaatagttggacctggatg 528 | ||||| | |||||| || |||||||| || ||| |||||||||| ||||||||||| Sbjct: 4125 aactatgtagacatgacccgaggcactcctcgttcagtatccaatagcgggacctggatg 4184 Query: 529 cccatattggatcc 542 |||||||||||||| Sbjct: 4185 cccatattggatcc 4198 Score = 44.1 bits (22), Expect = 0.72 Identities = 40/46 (86%) Strand = Plus / Minus Query: 220 ggcccctcccggtggaactctggatcccattcgtcactcccggtac 265 |||||||||||||| | | ||| ||||||||||||||||||||| Sbjct: 322 ggcccctcccggtgaacacccggaacccattcgtcactcccggtac 277
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 133 bits (67), Expect = 1e-27 Identities = 85/91 (93%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 38199 gtatgttacttgcccgagattcgatcgtcgatatctcaatacctagttcaatctcgttac 38140 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 38139 cggcaagtctctttactcgttctgtaataca 38109 Score = 117 bits (59), Expect = 6e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 71847 gtatgttacttgcccgagattcgatcgtcggtatctcgatacctagttcaatctcgttac 71788 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 71787 cggcaagtctctttactcgttccgtaataca 71757 Score = 111 bits (56), Expect = 4e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 28564 gtatgttacttgcccgagattcgatcgtcggtatcttcatacctagttcaatctcgttac 28623 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| ||||||||||||| ||||| Sbjct: 28624 cggcaagtgtctttactcgttccgtaat 28651 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 31390 gtatgttacttgcctgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 31331 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||| | |||||||||||||||||||||| Sbjct: 31330 cggcaaatctctttactcgttctgtaataca 31300 Score = 105 bits (53), Expect = 2e-19 Identities = 93/105 (88%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| || |||||||| ||||||||||||||||||||| |||| |||||| Sbjct: 83520 attccctttgtcattg-gtatgttacttgcccgagattcgatcgtcggtatcatcatacc 83462 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaat 712 || ||||||||||||||| |||| ||||||||||||||||||| Sbjct: 83461 tagttcaatctcgttaccggtaagtctctttactcgttctgtaat 83417 Score = 101 bits (51), Expect = 4e-18 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| |||||||| |||| ||||||| | Sbjct: 71998 cgggttcgagaactatgtagacatgaccgagacacctctccggtyaataaccaatagcgg 71939 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 71938 gacctggatgcccatattggctcccacatattctacgaagatctt 71894 Score = 97.6 bits (49), Expect = 6e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 96666 gtatgttacttgcccgagattcgatcgtcggtatcatcatacctagttcaatctcgttac 96725 Query: 685 caacaagtatctttactcgtt 705 | ||||| |||||||||||| Sbjct: 96726 cggcaagtctctttactcgtt 96746 Score = 93.7 bits (47), Expect = 9e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||||| ||||||| ||||||||||||| Sbjct: 17724 gtatgttacttgcccgagattcgatcgtgggtatctcaatacctagttcaatctcgttat 17783 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||| |||| |||||||| Sbjct: 17784 cggcaagtctctttacttgttccgtaataca 17814 Score = 93.7 bits (47), Expect = 9e-16 Identities = 232/291 (79%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-t 495 ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || | | | Sbjct: 91261 gaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgagacgcct 91320 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 |||||||||||| |||| || ||| |||||| ||||| |||| ||| || | ||| ||| Sbjct: 91321 ctccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgttccacg 91380 Query: 556 aagatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccct 614 | ||||| |||| ||| || | |||| |||||| | | |||| |||||| ||||||| Sbjct: 91381 atgatctcatcggatgaaccacgatgtcgaggattcaatcaatcccgtatacaattccct 91440 Query: 615 ttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttca 674 ||||| | |||||||| ||||||||||||||||||||| |||| | | |||| |||| Sbjct: 91441 ttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaacaccttgttca 91500 Query: 675 atctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 91501 atctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 91551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 448 gtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaat 506 ||||||||| | ||||||||||| ||||| | |||||||| || ||| |||| |||||| Sbjct: 38362 gtgcagaccctacgggttcgagaactatgtagacatgaccgagacacctctcttgtcaat 38303 Query: 507 atccaatagttggacctggatgcccatattggatcctacttattctacgaagatctt 563 | ||||||| |||||| |||||||||||||| |||||| ||||||| ||||||||| Sbjct: 38302 aaccaatagcgggacctagatgcccatattggctcctacatattctatgaagatctt 38246 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 |||||| |||| ||||| | |||||||| || ||| |||| ||||||| ||||||| | Sbjct: 31541 cgggtttgagaactatgtagacatgaccgagacacctctcttgtcaataaccaatagcgg 31482 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 31481 gacctggatgcccatattggctcctacatattctatgaagatctt 31437 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||| Sbjct: 71020 tatgttacttgcccgagattcgatcgtcggtatcatcatacctagttcaatctcgttacc 70961 Query: 686 aacaagtatctttactcgttc 706 || | ||||||||||||| Sbjct: 70960 ggaaattctctttactcgttc 70940 Score = 77.8 bits (39), Expect = 5e-11 Identities = 88/103 (85%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | | Sbjct: 17575 ggttcgagaactatgtagacatgaccgagacacgtctccggtcaataaccaatagcggaa 17634 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||| ||||||| ||| || ||||||||||||||||| Sbjct: 17635 cctggatgctcatattgactcccacatattctacgaagatctt 17677 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | ||||||| || ||| ||||||||||||| ||||||| | Sbjct: 12720 cgggttcgagaactatgtagacatgactgagacacctctccggtcaataaccaatagcgg 12779 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||| ||||||||| Sbjct: 12780 aacctggatgctcatattggctcccacatattctatgaagatctt 12824 Score = 73.8 bits (37), Expect = 8e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| || |||||||||||||||||| ||||| |||||||| ||||||||| |||| Sbjct: 12872 gtatgttacttacccgagattcgatcgtcggtatcttcatacctagttcaatctcattac 12931 Query: 685 caacaagtatctttact 701 ||||| |||||||| Sbjct: 12932 tggcaagtctctttact 12948 Score = 71.9 bits (36), Expect = 3e-09 Identities = 88/104 (84%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 461 gggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgg 519 |||||||||| ||||| | |||||| | || ||| ||||||||||||| ||||||| | Sbjct: 83650 gggttcgagaactatgtagacatgatcgagacacatctccggtcaataaccaatagcaga 83591 Query: 520 acctggatgcccatattggatcctacttattctacgaagatctt 563 |||| ||||| |||||||| | |||| ||||||||||||||||| Sbjct: 83590 accttgatgctcatattggcttctacatattctacgaagatctt 83547 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| ||||||||||||||||| Sbjct: 91133 acttcctatatataattcttcacctccggaccattccggaactcctcgtgacgtccggga 91192 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 91193 tctcatccgggactc 91207 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 523 tggatgcccatattggatcctacttattctacgaagatctt 563 ||||||| |||||||| ||| || ||||||||||||||||| Sbjct: 28476 tggatgctcatattggctcccacatattctacgaagatctt 28516
>emb|AJ582561.1|HVU582561 Hordeum vulgare BARE-1 long terminal repeat HvCal-20 mRNA Length = 730 Score = 127 bits (64), Expect = 6e-26 Identities = 198/240 (82%), Gaps = 2/240 (0%) Strand = Plus / Minus Query: 245 cccattcgtcactcccggtactttacctgcaatgtccgaaaacctttcggaagccaaaat 304 ||||||||||||||||||||| | || | |||| ||||||||||| ||| | |||| | Sbjct: 239 cccattcgtcactcccggtacaatcccggtaatgcccgaaaaccttccggtaaccaag-t 181 Query: 305 ggatacttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtcc 364 | | | |||||||||||| ||||| | | |||| ||||| ||||||||||||||||||| Sbjct: 180 gaagtcatcctatatatcaatattcgtctccggaccattccggaaaccctcgtgacgtcc 121 Query: 365 gggatctcatccgggactctgaaaaaccttctgttaccaacatcaataattcaactatac 424 | ||||||||||||||||||||| ||| ||| || ||| ||| |||| ||||||||| Sbjct: 120 gtgatctcatccgggactctgaacaacattcggtaacccacacatataagtcaactatag 61 Query: 425 cgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatg 484 |||||||| ||||||||| |||||| | | ||||||||||||| ||||| ||||||| Sbjct: 60 taaaacatcatcgaaccttaagtgtgca-agcctgcgggttcgagaactatgtatacatg 2 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||||||||||||||||||||||| |||||| Sbjct: 327 caccagcccactaagggctggtgcgccaccc 297
>dbj|AB077371.1| Leymus racemosus DNA, repeat sequence, clone:pLrCopi-2 Length = 492 Score = 127 bits (64), Expect = 6e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 ||||||||||||| | | |||||| ||||||||||||||||||||| |||||||||||| Sbjct: 343 attccctttgtccgtcggcatgttacttgcccgagattcgatcgtcggtatctccatacc 402 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaataca 715 || ||||||||||||||| ||||| ||||||||||||| |||||||| Sbjct: 403 tagttcaatctcgttaccggcaagtctctttactcgttccgtaataca 450 Score = 83.8 bits (42), Expect = 8e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 494 ctctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattcta 553 |||||||||||||| ||||||| | ||||||||||||||||||| |||||| ||||| | Sbjct: 243 ctctccggtcaataaccaatagcggaacctggatgcccatattggttcctacatattcca 302 Query: 554 cgaagatcttatcg 567 ||||||||||||| Sbjct: 303 tgaagatcttatcg 316 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaa 404 |||||||| ||||||||||||||||||||||| ||| ||| ||| |||||||| Sbjct: 99 cctcgtgatgtccgggatctcatccgggactccgaacaacattcggttaccaa 151
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 408905 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 408846 Query: 685 caacaagtatctttactcgttctgtaataca 715 || ||||| ||||||||||||| |||||||| Sbjct: 408845 cagcaagtctctttactcgttccgtaataca 408815 Score = 117 bits (59), Expect = 6e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||| ||| |||||| ||||||| |||||||||||||| Sbjct: 104409 gtatgttacttgcccgagattcgatcatcggtatctcaatacctagttcaatctcgttac 104350 Query: 685 caacaagtatctttactcgttctgtaataca 715 || ||||| |||||||||||| ||||||||| Sbjct: 104349 cagcaagtctctttactcgttttgtaataca 104319 Score = 109 bits (55), Expect = 1e-20 Identities = 83/91 (91%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 33854 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 33796 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 33795 cggcaagtctctttactcgttctgtaataca 33765 Score = 109 bits (55), Expect = 1e-20 Identities = 83/91 (91%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 218867 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 218809 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 218808 cggcaagtctctttactcgttctgtaataca 218778 Score = 109 bits (55), Expect = 1e-20 Identities = 83/91 (91%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 236181 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 236123 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 236122 cggcaagtctctttactcgttctgtaataca 236092 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 415663 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 415604 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| | |||||| Sbjct: 415603 cggcaagtctctttactcgttccgcaataca 415573 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 31714 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 31656 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 31655 cggcaagtctctttactcgttccgtaataca 31625 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 57891 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 57950 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 57951 cctggatgcccatattggctcctacatattctacgaagatctt 57993 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 139712 ggttcgagatcaatgcagacatgaccgagacacgtctccggtcaataaccaatagcggga 139771 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 139772 cctggatgcccatattggctcctacatattctacgaagatctt 139814 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||||| ||||||| |||||||| ||||| Sbjct: 200134 gtatgttacttgcccgagattcgatcgttggtatctcaatacctagttcaatcttgttac 200193 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||||| |||||||||||| |||||||| Sbjct: 200194 cgacaagtctctttactcgtttcgtaataca 200224 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 416940 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 416998 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 416999 cggcaagtctctttactcgttccgtaataca 417029 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 33969 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 33910 Query: 555 gaagatctt 563 ||||||||| Sbjct: 33909 gaagatctt 33901 Score = 97.6 bits (49), Expect = 6e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 115482 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 115423 Query: 685 caacaagtatctttact 701 | ||||| |||||||| Sbjct: 115422 cggcaagtctctttact 115406 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 132900 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 132959 Query: 555 gaagatctt 563 ||||||||| Sbjct: 132960 gaagatctt 132968 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 265351 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 265410 Query: 555 gaagatctt 563 ||||||||| Sbjct: 265411 gaagatctt 265419 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 272345 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 272404 Query: 555 gaagatctt 563 ||||||||| Sbjct: 272405 gaagatctt 272413 Score = 97.6 bits (49), Expect = 6e-17 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| |||| ||||||| ||||||| | Sbjct: 409056 cgggttcgagaactatgtagacatgaccgagacacctctcttgtcaataaccaatagcgg 408997 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 408996 gacctggatgcccatattggctcctacatattctacgaagatctt 408952 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 416825 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 416884 Query: 555 gaagatctt 563 ||||||||| Sbjct: 416885 gaagatctt 416893 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 ||||||||||||| | |||||||| | ||||||||||| ||||||| ||||| |||||| Sbjct: 12021 attccctttgtccatcggtatgttactagcccgagattcaatcgtcggtatcttcatacc 11962 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaataca 715 || |||||||| |||||| ||||| ||||||||||||| ||||||| Sbjct: 11961 tagttcaatcttgttaccggcaagtctctttactcgttccataataca 11914 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 ||||||||||||| | ||||||||| ||||| ||||||||||||| ||||| |||||| Sbjct: 159758 attccctttgtccatccgtatgttacttgcctaagattcgatcgtcagtatcttcatacc 159699 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaataca 715 || |||||||| |||||| ||||| ||||||||||||| ||||||| Sbjct: 159698 tagttcaatctagttaccggcaagtctctttactcgttccataataca 159651 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 40519 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 40578 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| |||||| |||||||||| Sbjct: 40579 cctggatgcccatattggctcctacatattcttcgaagatctt 40621 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 51059 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 51118 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 51119 cctggatgcccatattggctcctacatattctatgaagatctt 51161 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 58040 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 58098 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 58099 tggcaagtctctttactcgttccgtaataca 58129 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | ||||||||||| ||| ||||||||||||| ||||||| | | Sbjct: 115631 ggttcgagaaccatgtagacatgaccaagacacgtctccggtcaataaccaatagcggaa 115572 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 115571 cctggatgctcatattggctcctacatattctacgaagatctt 115529 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 219016 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 218957 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 218956 cctggatgcccatattggctcctgcatattctacgaagatctt 218914 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 236330 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 236271 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 236270 cctggatgcccatattggctcctgcatattctacgaagatctt 236228 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||| ||||||| Sbjct: 265466 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatatcgttac 265524 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 265525 cggcaagtctctttactcgttccgtaataca 265555 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||| ||||||| Sbjct: 272460 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatatcgttac 272518 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 272519 cggcaagtctctttactcgttccgtaataca 272549 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 423917 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 423975 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||| ||||||||||||| |||||||| Sbjct: 423976 cggtaagtctctttactcgttccgtaataca 424006 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 423802 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 423861 Query: 555 gaagat 560 |||||| Sbjct: 423862 gaagat 423867 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| |||| ||||||| | ||||| | Sbjct: 415814 cgggttcgagaactatgtagacatgaccgagacacctctcttgtcaataactaatagcgg 415755 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 415754 gacctggatgcccatattggctcctacatattctacgaagatctt 415710 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || | | || Sbjct: 31887 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagactcgtc 31828 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 31827 tccggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctacga 31768 Query: 557 agatctt 563 ||||||| Sbjct: 31767 agatctt 31761 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || | | || Sbjct: 42331 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagactcgtc 42272 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 42271 tccggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctacga 42212 Query: 557 agatctt 563 ||||||| Sbjct: 42211 agatctt 42205 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 51208 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 51266 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| |||||||||||| |||||||| Sbjct: 51267 tggcaagtctctttactcgtttcgtaataca 51297 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||| | ||||||| |||||||||||| | Sbjct: 139861 gtatgttacttgcccgagattcgatcgttggtatc-caatacctagttcaatctcgttgc 139919 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 139920 tagcaagtctctttactcgttccgtaataca 139950 Score = 81.8 bits (41), Expect = 3e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 42158 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 42100 Query: 685 caacaagtatctttact 701 | ||||| |||||||| Sbjct: 42099 cggcaagtctctttact 42083 Score = 79.8 bits (40), Expect = 1e-11 Identities = 89/104 (85%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 461 gggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgg 519 |||||||||| ||||| | ||||||| || ||| |||| |||||||| ||||||| | Sbjct: 6786 gggttcgagaactatgtagacatgactgagacacatctctggtcaataaccaatagcgga 6727 Query: 520 acctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 6726 acctggatgctcatattggctcctacatattctacgaagatctt 6683 Score = 77.8 bits (39), Expect = 5e-11 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||| ||||||| |||||||||||||| Sbjct: 40668 gtatgttacttgcccgagattcgatcgttggtatcga-atacctagttcaatctcgttac 40726 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 40727 tggcaagtctctttactcgttccgtaataca 40757 Score = 77.8 bits (39), Expect = 5e-11 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| || ||||||||| | Sbjct: 133015 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagtttaatctcgttgc 133073 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||| |||||| |||||||| Sbjct: 133074 tagcaagtctctttaatcgttccgtaataca 133104 Score = 73.8 bits (37), Expect = 8e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| |||||| | | |||||||||||||| |||| || ||| |||||||| Sbjct: 43658 tctccggtcaataaccaataatagaacctggatgcccatgttggctcttacatattctac 43599 Query: 555 gaagatctt 563 ||||||||| Sbjct: 43598 gaagatctt 43590 Score = 73.8 bits (37), Expect = 8e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||| Sbjct: 104524 tctccggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctac 104465 Query: 555 gaagatctt 563 |||||||| Sbjct: 104464 aaagatctt 104456 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcact-ctccggtcaatatccaatagttg 518 ||||||| ||| ||||| | |||||||| || |||| |||||||| ||| ||||||| | Sbjct: 159894 cgggttcaagaactatgtagacatgaccgagacacttctccggtcgataaccaatagagg 159835 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 159834 aacctggatgcccatattggctcctacatattctataaagatctt 159790 Score = 71.9 bits (36), Expect = 3e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||| |||||||| || |||||||| |||||| |||||||||| ||| ||||| |||||| Sbjct: 43558 attctctttgtccattagtatgttacttgcccaagattcgatcatcggtatcttcatacc 43499 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaataca 715 || ||| ||||| || || ||||| | ||||||||||| ||||||| Sbjct: 43498 tagttccatctcattgccggcaagtctttttactcgttccataataca 43451 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgtta 683 |||||||| ||||||||||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 6636 gtatgttacttgcccgagattcgatcgtcggtatcatcatacctagtccaatctcgtta 6578 Score = 65.9 bits (33), Expect = 2e-07 Identities = 103/125 (82%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-t 495 |||| |||| ||||| |||| | ||||||||||| ||||| | |||| ||| || ||| | Sbjct: 12180 gaacgttaagtgtgcggaccctacgggttcgagaactatgtagacataaccgagacacct 12121 Query: 496 ctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacg 555 |||||||||||| |||||| | || |||||| |||||||| |||||| ||||||||| Sbjct: 12120 ctccggtcaataaccaataacggaacttggatgatcatattggctcctacatattctacg 12061 Query: 556 aagat 560 ||||| Sbjct: 12060 aagat 12056 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 629 gttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaac 688 |||| ||||||||||||||||| ||| |||| | |||||| ||||||||| ||||| | Sbjct: 125968 gttacttgcccgagattcgatcctcggtatcccaatacctcgttcaatctcattaccggc 125909 Query: 689 aagtatctttactcgttctgtaatacaagatcccgtg 725 |||| |||||||||| | ||||| || ||||||||| Sbjct: 125908 aagtcactttactcgtaccgtaatgcatgatcccgtg 125872 Score = 58.0 bits (29), Expect = 5e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| | ||||| |||| |||||||| ||| || ||||||| Sbjct: 200019 tctccggtcaataaccaatagcggaacctgaatgctcatattggctcccacatattctat 200078 Query: 555 gaagatctt 563 ||||||||| Sbjct: 200079 gaagatctt 200087 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| |||| |||||||||||||||| ||||||| Sbjct: 132759 cctcgtcatgtccgtgatcacatccgggactctgaacaaccttc 132802 Score = 42.1 bits (21), Expect = 2.9 Identities = 109/137 (79%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| | | | |||||||| || Sbjct: 126167 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacacgcagacatgaccgaga 126108 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattggatcctacttatt 550 | ||||||||||||||| |||| || ||| |||||| ||||| |||| ||| || | || Sbjct: 126107 cgactctccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgtt 126048 Query: 551 ctacgaagatcttatcg 567 | |||| ||||| |||| Sbjct: 126047 ccacgatgatctcatcg 126031 Score = 42.1 bits (21), Expect = 2.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 126264 cggaccattccggaactcctcgtgacgtccaagatctcatcagggactc 126216
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 91625 gtatgttacttgcccgagattcgatcgtcgatatctcaatacctagttcaatctcgttac 91566 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 91565 cggcaagtctctttactcgttccgtaataca 91535 Score = 123 bits (62), Expect = 1e-24 Identities = 83/90 (92%) Strand = Plus / Minus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 98420 tatgttacttgcccgagattcgatcgtcgatatctcaatacctagttcaatctcgttacc 98361 Query: 686 aacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 98360 ggcaagtctctttactcgttccgtaataca 98331 Score = 117 bits (59), Expect = 6e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 81877 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 81818 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 81817 cggcaagtctctttactcgttccgtaataca 81787 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| || |||||||||||||| ||| |||||| ||||||| |||||||||||||| Sbjct: 5272 gtatgttactttcccgagattcgatcatcggtatctcaatacctagttcaatctcgttac 5331 Query: 685 caacaagtatctttactcgttctgtaataca 715 || ||||| |||||||||||| |||||||| Sbjct: 5332 cagcaagtctctttactcgtttcgtaataca 5362 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||| ||||||||| Sbjct: 209491 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcagtctcgttac 209433 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 209432 cggcaagtctctttactcgttccgtaataca 209402 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| |||| || ||||||||||||||||||||| |||||| |||||||| Sbjct: 91740 tctccggtcaataaccaacagcgggacctggatgcccatattggctcctacatattctac 91681 Query: 555 gaagatctt 563 ||||||||| Sbjct: 91680 gaagatctt 91672 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| |||| || ||||||||||||||||||||| |||||| |||||||| Sbjct: 98536 tctccggtcaataaccaacagcgggacctggatgcccatattggctcctacatattctac 98477 Query: 555 gaagatctt 563 ||||||||| Sbjct: 98476 gaagatctt 98468 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 209606 tctccggtcaataaccaatagcgtgacctggatgcccatattggctcctacatattctac 209547 Query: 555 gaagatctt 563 ||||||||| Sbjct: 209546 gaagatctt 209538 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| | ||| | |||||||| || ||| |||| |||||||| ||||||| | Sbjct: 5120 cgggttcgagaacaatgtagacatgaccgagacacatctctggtcaataaccaatagcgg 5179 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||||||||||||| Sbjct: 5180 aacctggatgctcatattggctcccacatattctacgaagatctt 5224 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 518 ggacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 81969 ggacctggatgcacatattggctcctacatattctacgaagatctt 81924 Score = 63.9 bits (32), Expect = 8e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||| ||| ||| | |||||| ||||||||||||| | |||||| Sbjct: 118698 ttgcccgagattcgatcatcggtataccgataccttgttcaatctcgtta-cgacaagtc 118640 Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||| |||| ||| |||||||| Sbjct: 118639 tctttactcgttccgtaacacatcatcccgtg 118608 Score = 58.0 bits (29), Expect = 5e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaac 391 |||| ||||| |||| |||||| |||||||| |||||||||||||||| ||||||| Sbjct: 118999 cggaccattccggaactcctcgttacgtccggaatctcatccgggactccgaaaaac 118943 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||||||||| |||||| ||||||||||||||||| ||||||| Sbjct: 111958 cattctggaactcctcgttacgtccgggatctcatctgggactc 111915 Score = 50.1 bits (25), Expect = 0.012 Identities = 62/73 (84%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||| ||| ||| | |||||| ||||||||||||| | ||||| Sbjct: 111662 ttgcccgagattcgatcatcggtataccgataccttgttcaatctcgtta-cggcaagtc 111604 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 111603 tctttactcgttc 111591
>gb|DQ234070.1| Secale cereale clone 1 RAPD marker G15 genomic sequence Length = 983 Score = 117 bits (59), Expect = 6e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 239 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 298 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 299 ctgcaagtctctttactcgttccgtaataca 329 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| ||||| | |||||||| || | | || Sbjct: 65 aaccttaagcgtgcggaccctacgggttcgagaactatgtagacatgaccgagactcatc 124 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 |||| |||||| ||||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 125 tccgatcaataaccaatagcggaacctggatgctcatattggctcctacatattctacga 184 Query: 557 agatctt 563 ||||||| Sbjct: 185 agatctt 191
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 117 bits (59), Expect = 6e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 142652 gtatgttacttgcccgagattcgatcgtcgatatcttaatacctagttcaatctcgttac 142593 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||||| |||||| |||||| |||||||| Sbjct: 142592 cgacaagtctctttattcgttccgtaataca 142562 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||| Sbjct: 51519 tatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttacc 51578 Query: 686 aacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 51579 ggcaagtctctttactcgttccgtaataca 51608 Score = 111 bits (56), Expect = 4e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||||| Sbjct: 170921 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaacctcgttac 170980 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgt 724 | ||||| |||||| |||||||||||| ||| ||||||| Sbjct: 170981 cggcaagtctctttattcgttctgtaatgcaacatcccgt 171020 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 9175 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 9233 Query: 685 caacaagtatctttactcgttctgtaataca 715 || ||||| |||||||| |||| |||||||| Sbjct: 9234 cagcaagtctctttacttgttccgtaataca 9264 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 97982 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 97924 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 97923 cggcaagtctctttactcgttccgtaataca 97893 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 57973 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 58032 Query: 555 gaagatctt 563 ||||||||| Sbjct: 58033 gaagatctt 58041 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||| |||| Sbjct: 58088 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcattac 58146 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 58147 cggcaagtctctttactcgttccgtaataca 58177 Score = 93.7 bits (47), Expect = 9e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||| ||| |||||| ||||||| ||||||||||||| Sbjct: 89551 gtatgttacttgcccgagattcgatcatcggtatctcaatacctaggtcaatctcgttac 89610 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| ||||||| Sbjct: 89611 cggcaagtctctttactcgttccataataca 89641 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 104815 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 104757 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||| ||||||||||||| |||||||| Sbjct: 104756 cggaaagtctctttactcgttccgtaataca 104726 Score = 93.7 bits (47), Expect = 9e-16 Identities = 114/135 (84%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| |||| |||| |||| |||| | ||||||||||| ||||| | |||||||| | Sbjct: 154601 catcaccgaacgttaagcgtgcggaccctacgggttcgagaactatgtacacatgaccga 154660 Query: 490 ggcac-tctccggtcaatatccaatagttggacctggatgcccatattggatcctactta 548 | | | ||||||||||||| ||||||| | |||||||||| |||||||| |||||| || Sbjct: 154661 gactcatctccggtcaataaccaatagcggaacctggatgctcatattggctcctacata 154720 Query: 549 ttctacgaagatctt 563 ||||||||||||||| Sbjct: 154721 ttctacgaagatctt 154735 Score = 93.7 bits (47), Expect = 9e-16 Identities = 114/135 (84%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| |||| |||| |||| |||| | ||||||||||| ||||| | |||||||| | Sbjct: 170740 catcactgaacgttaagcgtgcggaccctacgggttcgagaactatgtagacatgaccga 170799 Query: 490 ggcac-tctccggtcaatatccaatagttggacctggatgcccatattggatcctactta 548 | | | ||||||||||||| ||||||| | |||||||||| |||||||| |||||| || Sbjct: 170800 gactcatctccggtcaataaccaatagaggaacctggatgctcatattggctcctacata 170859 Query: 549 ttctacgaagatctt 563 ||||||||||||||| Sbjct: 170860 ttctacgaagatctt 170874 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 4830 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 4889 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||||||| | ||||| || ||||||||| Sbjct: 4890 ttgttcaatctcgttaccggcaagtcactttactcgtaccgtaatgcatgatcccgtg 4947 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 13362 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 13421 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||||||| | ||||| || ||||||||| Sbjct: 13422 ttgttcaatctcgttaccggcaagtcactttactcgtaccgtaatgcatgatcccgtg 13479 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| |||| ||| |||| |||| || | Sbjct: 9024 cgggttcgagaactatgtagacatgaccgagacacgtctctggttaataaccaacagcgg 9083 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 9084 gacctggatgcccatattggctcctacatattctacgaagatctt 9128 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 |||| |||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 98098 tctctggtcaataaccaatagcgggacctggatgcccatattggttcctacatattctac 98039 Query: 555 gaagatctt 563 ||||||||| Sbjct: 98038 gaagatctt 98030 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| | |||||| ||||||||||||||| ||||| Sbjct: 88814 ttgcccgagattcgatcgtcggtatcccgataccttgttcaatctcgttaccggcaagtc 88873 Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||| |||| ||| |||||||| Sbjct: 88874 tctttactcgttccgtaacacatcatcccgtg 88905 Score = 87.7 bits (44), Expect = 5e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 154782 gtatgttacttgcctgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 154841 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgt 724 | ||| | ||||||||| ||| |||| ||| ||||||| Sbjct: 154842 cggcaattctctttactctttccataatgcaacatcccgt 154881 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || || ||||||||||||| ||||||| | Sbjct: 51367 cgggttcgagaactatgtagacatgaccgagacatgtctccggtcaataaccaatagcgg 51426 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||||||||||||| Sbjct: 51427 aacctggatgctcatattggctcccacatattctacgaagatctt 51471 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 |||| |||||||| ||||||| ||||||| ||||||||||||| |||||| |||||||| Sbjct: 104931 tctctggtcaataaccaatagcaggacctgaatgcccatattggttcctacatattctac 104872 Query: 555 gaagatctt 563 ||||||||| Sbjct: 104871 gaagatctt 104863 Score = 65.9 bits (33), Expect = 2e-07 Identities = 88/105 (83%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||| || |||| |||| || | Sbjct: 142803 cgggttcgagaactatgcagacatgaccgagacacgtctccagtaaataaccaacagcgg 142744 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||||||||||||| Sbjct: 142743 aacctggatgctcatattggctcccacatattctacgaagatctt 142699 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 4572 cctcgtgacgtccgggatctcatccgggactc 4603 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 ||||||||||| |||||||||||||||||||| Sbjct: 13104 cctcgtgacgttcgggatctcatccgggactc 13135 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 ||||||||||| |||||||||||||||||||| Sbjct: 88530 cctcgtgacgttcgggatctcatccgggactc 88561 Score = 48.1 bits (24), Expect = 0.046 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || Sbjct: 4652 tcactgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgaga 4711 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattgg 538 | ||||||||||||||| |||| || ||| |||||| ||||| |||| Sbjct: 4712 cgactctccggtcaataaccaacagcaggatctggatacccatgttgg 4759 Score = 48.1 bits (24), Expect = 0.046 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || Sbjct: 13184 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgaga 13243 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattgg 538 | ||||||||||||||| |||| || ||| |||||| ||||| |||| Sbjct: 13244 cgactctccggtcaataaccaacagcgggatctggatacccatgttgg 13291 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| |||| |||||||||||||||| ||||||| Sbjct: 57829 cctcgtcatgtccgcgatcacatccgggactctgaacaaccttc 57872 Score = 44.1 bits (22), Expect = 0.72 Identities = 37/42 (88%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatatt 536 ||||||||||||| ||||||| | |||||||||| |||||| Sbjct: 87686 tctccggtcaataaccaatagcggaacctggatgctcatatt 87727
>emb|AJ582403.1|HVU582403 Hordeum vulgare BARE-1 long terminal repeat Hv-a2 DNA Length = 569 Score = 115 bits (58), Expect = 2e-22 Identities = 146/174 (83%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 173 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 114 Query: 372 catccgggactctgaaaaaccttctgttaccaacatcaataattcaactataccgaaaca 431 |||||||||||| ||| ||| ||| || ||| |||| |||| |||||||||| ||||| Sbjct: 113 catccgggactccgaacaacattcggtaacc-acatatataactcaactatactaaaaca 55 Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 | | ||||||||| |||||||||| ||| ||||||||| ||||| | |||||| Sbjct: 54 tggccgaaccttaagtgtgcagaccctgcaggttcgagaactatgtagacatga 1 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 323 caccagcccactaagggctggtg 301
>gb|DQ537337.1| Triticum aestivum clone BAC 897M20, complete sequence Length = 152010 Score = 111 bits (56), Expect = 4e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 47209 gtatgttacttgcccgagattcgatcgtcggtatcttcatacctagttcaatctcgttac 47268 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| ||||||||||||| ||||| Sbjct: 47269 cggcaagtctctttactcgttccgtaat 47296 Score = 105 bits (53), Expect = 2e-19 Identities = 93/105 (88%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| || |||||||| ||||||||||||||||||||| |||| |||||| Sbjct: 97855 attccctttgtcattg-gtatgttacttgcccgagattcgatcgtcggtatcatcatacc 97797 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaat 712 || ||||||||||||||| |||| ||||||||||||||||||| Sbjct: 97796 tagttcaatctcgttaccggtaagtctctttactcgttctgtaat 97752 Score = 103 bits (52), Expect = 9e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||| |||| Sbjct: 3005 gtatgttacttgcccgagattcgatcgtcggtatcttcatacctagttcaatctcattac 3064 Query: 685 caacaagtatctttactcgttctgtaat 712 || ||||| |||||||| |||| ||||| Sbjct: 3065 cagcaagtctctttacttgttccgtaat 3092 Score = 103 bits (52), Expect = 9e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 135027 gtatgttacttgcccgagattcgatcgtcggtatcatcatacctagttcaatctcgttac 135086 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| ||||||||||||| ||||| Sbjct: 135087 cggcaagtctctttactcgttccgtaat 135114 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||| ||| |||||| ||||||| ||||||||||||| Sbjct: 36363 gtatgttacttgcccgagattcgatcatcggtatctcaatacctagttcaatctcgttat 36422 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||||| ||||||||||||| ||||||| Sbjct: 36423 cgacaagtctctttactcgttccataataca 36453 Score = 97.6 bits (49), Expect = 6e-17 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 |||||| |||| ||||| | |||||||| || ||| ||||||||||||| |||||||| | Sbjct: 134876 cgggtttgagaactatgtagacatgaccgagacacatctccggtcaataaccaatagtgg 134935 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 134936 aacctggatgctcatattggctcctacatattctacgaagatctt 134980 Score = 91.7 bits (46), Expect = 3e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 91035 gtatgttacttgcccgagattcgatcgtcggtatcatcatacctagttcaatctcgttac 90976 Query: 685 caacaagtatctttactcgttc 706 | | || | ||||||||||||| Sbjct: 90975 cgaaaattctctttactcgttc 90954 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||||| |||||||||||||| Sbjct: 48965 gtatgttacttgcccgagattcgatcgtcggtatcccaataccttgttcaatctcgttac 49024 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 49025 cggcaagtctctttactcgtaccgcaatgcatgatcccgtg 49065 Score = 89.7 bits (45), Expect = 1e-14 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 448 gtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaat 506 ||||||||| | |||||||||| ||||| | ||||||| || ||| |||||||||||| Sbjct: 91198 gtgcagaccctatgggttcgagaactatgtagacatgactgagccacatctccggtcaat 91139 Query: 507 atccaatagttggacctggatgcccatattggatcctacttattctacgaagatctt 563 | ||||||| | |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 91138 aaccaatagcggaacctggatgctcatattggctcctacatattctacgaagatctt 91082 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 97990 cgggttcgagaactatgtagacatgaccgagacacatctccggtcaataaccaatagcag 97931 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||| ||||| |||||||| |||||| ||||||||||||||||| Sbjct: 97930 aaccttgatgctcatattggctcctacatattctacgaagatctt 97886 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 112545 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 112486 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgt 704 | ||||||||||||||| ||||| ||||||||||| Sbjct: 112485 ttgttcaatctcgttaccggcaagtctctttactcgt 112449 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 |||||| |||| ||||| | ||||||||||| ||| ||||||||||||| |||| || | Sbjct: 2855 cgggttagagaactatgtagacatgaccaagacacctctccggtcaataaccaacagcgg 2914 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 2915 aacctggacgctcatattggttcctacatattctacgaagatctt 2959 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||||| ||||||||| |||| Sbjct: 55999 gtatgttacttgcccgagattcgatcgtcggtatcccaataccttgttcaatctcattac 56058 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 56059 cggcaagtctctttactcgtaccgcaatgcatgatcccgtg 56099 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | ||||||| || ||| ||||||||||||| ||||||| | Sbjct: 31370 cgggttcgagaactatgtagacatgactgagacacctctccggtcaataaccaatagcgg 31429 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||| ||||||||| Sbjct: 31430 aacctggatgctcatattggctcccacatattctatgaagatctt 31474 Score = 73.8 bits (37), Expect = 8e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| || |||||||||||||||||| ||||| |||||||| ||||||||| |||| Sbjct: 31522 gtatgttacttacccgagattcgatcgtcggtatcttcatacctagttcaatctcattac 31581 Query: 685 caacaagtatctttact 701 ||||| |||||||| Sbjct: 31582 tggcaagtctctttact 31598 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| | |||||||||||||||| Sbjct: 48647 acttcctatatataattcttcacctccggaccattccggaacctctcgtgacgtccggga 48706 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 48707 tctcatccgggactc 48721 Score = 61.9 bits (31), Expect = 3e-06 Identities = 86/103 (83%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| ||||| | |||||||| || ||| ||| ||||||||| ||||||| | | Sbjct: 36214 ggttcgagaactatgtagacatgaccgagacacgtcttcggtcaataaccaatagcggaa 36273 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||| ||||||| ||| || |||||||||||| |||| Sbjct: 36274 cctggatgctcatattgactcccacatattctacgaaggtctt 36316 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 353 ctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||||||||||||||||||||| Sbjct: 55725 ctcgtgacgtccgggatctcatccgggactc 55755 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||||||||| | |||||||| || ||||||||||||||||||| Sbjct: 112814 cattctggaacctctcgtgacatctgggatctcatccgggactc 112771 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 662 catacctatttcaatctcgttaccaacaagtatctttactcgtt 705 |||||||| ||||||||||||||| ||||| |||||||||||| Sbjct: 113580 catacctagttcaatctcgttaccggcaagtctctttactcgtt 113623 Score = 42.1 bits (21), Expect = 2.9 Identities = 85/105 (80%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggca-ctctccggtcaatatccaatagttg 518 ||||||||||| ||||| | ||||||| || || ||||| |||||||| | ||||| | Sbjct: 47057 cgggttcgagaactatgtagacatgactgagacacctctctggtcaataacaaatagcag 47116 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| ||| |||| | | || ||||||| ||||||||| Sbjct: 47117 aacctggatgctcatgttggcttccacatattctatgaagatctt 47161
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 111 bits (56), Expect = 4e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||||| Sbjct: 99169 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaacctcgttac 99228 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgt 724 | ||||| ||||||||||||| ||||| ||| ||||||| Sbjct: 99229 cggcaagtctctttactcgttccgtaatgcaacatcccgt 99268 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||| Sbjct: 33764 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttat 33823 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 33824 cggcaagtctctttactcgttccgtaataca 33854 Score = 109 bits (55), Expect = 1e-20 Identities = 83/91 (91%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 139998 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 140056 Query: 685 caacaagtatctttactcgttctgtaataca 715 || ||||| ||||||||||||| |||||||| Sbjct: 140057 cagcaagtctctttactcgttccgtaataca 140087 Score = 109 bits (55), Expect = 1e-20 Identities = 89/99 (89%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 190456 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 190514 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccg 723 | ||||| ||||||||||||| ||||||||| |||||| Sbjct: 190515 cggcaagtctctttactcgttccgtaatacaacatcccg 190553 Score = 101 bits (51), Expect = 4e-18 Identities = 109/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| ||| | |||||||| || ||| || Sbjct: 9591 aaccttaagcgtgcggaccctacgggttcgagaataatgtagacatgaccgagacacgtc 9650 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 9651 tccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctacga 9710 Query: 557 agatctt 563 ||||||| Sbjct: 9711 agatctt 9717 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 9765 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 9823 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 9824 cggcaagtctctttactcgttccgtaataca 9854 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 114900 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 114842 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 114841 cggcaagtctctttactcgttccgtaataca 114811 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 115050 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 114991 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 114990 cctggatgcccatattggttcctacatattctacgaagatctt 114948 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 124373 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 124315 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 124314 cggcaagtctctttactcgttccgtaataca 124284 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 124523 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 124464 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 124463 cctggatgcccatattggttcctacatattctacgaagatctt 124421 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 188207 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 188266 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 188267 cctggatgcccatattggctcctacatattctacgaagatctt 188309 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 133063 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 133122 Query: 555 gaagatctt 563 ||||||||| Sbjct: 133123 gaagatctt 133131 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 190341 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 190400 Query: 555 gaagatctt 563 ||||||||| Sbjct: 190401 gaagatctt 190409 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 44870 gtatgttacttgcccgagattcgatcgtcggtatcta-atacctagttcaatctcgttac 44928 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||| ||| |||||||| Sbjct: 44929 cggcaagtctctttactcattccgtaataca 44959 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||| |||| Sbjct: 133179 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcattac 133237 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 133238 cggcaagtctctttactcgttccgtaataca 133268 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||||| || Sbjct: 188356 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgtaac 188414 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 188415 cggcaagtctctttactcgttccgtaataca 188445 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||||| Sbjct: 147965 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaacctcgttac 148024 Query: 685 caacaagtatctttactcgttctgtaatacaagatccc 722 ||||| ||||||||| ||| ||||| ||| ||||| Sbjct: 148025 gggcaagtctctttactcattccgtaatgcaacatccc 148062 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || | | ||||||||||||| ||||||| | Sbjct: 99018 cgggttcgagaactatgtagacatgaccgagactcatctccggtcaataaccaatagcgg 99077 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 99078 aacctggatgctcatattggctcctacatattctacgaagatctt 99122 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| |||||| |||||||||||||| |||||| |||||||| Sbjct: 139882 tctccggtcaataaccaatagcgggacctagatgcccatattggctcctacatattctac 139941 Query: 555 gaagatctt 563 ||||||||| Sbjct: 139942 gaagatctt 139950 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || || || Sbjct: 44696 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacatgtc 44755 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 | ||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| | Sbjct: 44756 ttcggtcaataaccaatagcgggacctggatgcccatattggttcctacatattctacaa 44815 Query: 557 agatctt 563 ||||||| Sbjct: 44816 agatctt 44822 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || || || Sbjct: 51528 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacatgtc 51587 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 |||||||| || ||||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 51588 tccggtcagtaaccaatagcgggacctggatgcccatattggttcgtacatattctacga 51647 Query: 557 agatctt 563 ||||||| Sbjct: 51648 agatctt 51654 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 643 attcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactc 702 |||| ||||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 80813 attcaatcgtcggtatctcaatacctagttcaatctcgttaccggcaagtctctttactc 80872 Query: 703 gttctgtaataca 715 |||| |||||||| Sbjct: 80873 gttccgtaataca 80885 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || | | ||||||| ||||| ||||||| | Sbjct: 147814 cgggttcgagaactatgtagacatgaccgagactcatctccggacaataaccaatagcgg 147873 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 147874 aacctggatgctcatattggctcctacatattctacgaagatctt 147918 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || || ||||||||||||| ||||||| | Sbjct: 33613 cgggttcgagaactatgtagacatgaccgagacatgtctccggtcaataaccaatagcgg 33672 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||| ||||||||| Sbjct: 33673 aacctggatgctcatattggttcccacatattctatgaagatctt 33717 Score = 73.8 bits (37), Expect = 8e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| | |||||||||| |||||||| ||| || |||||||| Sbjct: 80679 tctccggtcaataaccaatagcggaacctggatgctcatattggctcccacatattctac 80738 Query: 555 gaagatctt 563 ||||||||| Sbjct: 80739 gaagatctt 80747 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 44610 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 44653 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 188100 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 188143
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete sequence Length = 292102 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 42554 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 42613 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 42614 cggcaagtctctttactcgtttcgtaataca 42644 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||| ||||||| |||||| ||||||| |||||||||||||| Sbjct: 22445 gtatgttacttgcccgagattcaatcgtcggtatctcaatacctagttcaatctcgttac 22504 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 22505 cggcaagtctctttactcgtttcgtaataca 22535 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 20666 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 20607 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||| ||||||||| || ||||||||| Sbjct: 20606 tcgttcaatctcgttaccggcaagtcactttacttgttctgtaacgcatgatcccgtg 20549 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 42381 aaccttaaacgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 42440 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| ||| || |||||||||| Sbjct: 42441 tccggtcaataaccaatagcggaacctggatgctcatattggctcccacatattctacga 42500 Query: 557 agatctt 563 ||||||| Sbjct: 42501 agatctt 42507 Score = 83.8 bits (42), Expect = 8e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| | || |||||||| ||||||||| |||| Sbjct: 279055 gtatgttacttgcccgagattcgatcgtcggtgtcatcatacctagttcaatctcattac 278996 Query: 685 caacaagtatctttactcgttc 706 | ||||| ||||||||||||| Sbjct: 278995 cggcaagtctctttactcgttc 278974 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||| | |||||| |||||||||||||| Sbjct: 63598 gtatgttacttgcccgagattcgatcgtcggtatgccaatacctcgttcaatctcgttac 63539 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| |||||||||| | ||||| || ||||||||| Sbjct: 63538 cggcaagtcactttactcgtaccgtaatgcatgatcccgtg 63498 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||| ||||| |||| |||||||| ||||||||| |||| Sbjct: 278229 gtatgttacttgcccgagattcgagcgtcggtatccacatacctagttcaatctctttac 278170 Query: 685 caacaagtatctttactcgtt 705 | ||||| |||||||||||| Sbjct: 278169 cggcaagtctctttactcgtt 278149 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || | | |||||||| |||| ||||||| | Sbjct: 278381 cgggttcgagaactatgtagacatgaccgagacgcctctccggtaaataaccaatagcgg 278322 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 278321 aacctggatgctcatattggctcctacatattctacgaagatctt 278277 Score = 77.8 bits (39), Expect = 5e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||| | |||||| |||||||||||||| Sbjct: 13787 gtatgttacttgccggagattcgatcgtcggtatcccaatacctcgttcaatctcgttac 13728 Query: 685 caacaagtatctttactcgttctgtaa 711 | ||||| |||||||| |||||||| Sbjct: 13727 cggcaagtcactttactcattctgtaa 13701 Score = 77.8 bits (39), Expect = 5e-11 Identities = 106/127 (83%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 22272 aaccttaagcgtgcggaccctacgggttcgagaacaatgtacacatgaccgagacacgtc 22331 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 | ||||||||| ||||||| | |||||||||| |||||||| ||| || |||||||||| Sbjct: 22332 ttcggtcaataaccaatagcggaacctggatgctcatattggctcccacatattctacga 22391 Query: 557 agatctt 563 ||||||| Sbjct: 22392 agatctt 22398 Score = 75.8 bits (38), Expect = 2e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 463 gttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggac 521 |||||||| ||||| | |||||| | || ||| ||||||||||||| ||||||| | || Sbjct: 279203 gttcgagaactatgtagacatgatcgagacacatctccggtcaataaccaatagcggaac 279144 Query: 522 ctggatgcccatattggatcctacttattctacgaagatctt 563 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 279143 ctggaggctcatattggctcctacatattctacgaagatctt 279102 Score = 73.8 bits (37), Expect = 8e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaac 391 |||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 63890 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactccgaaaaac 63834 Score = 73.8 bits (37), Expect = 8e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||| | |||||| |||||||||||||| Sbjct: 69740 gtatgttacttgcccgagattcgatcgtaggtatcccaatacctcgttcaatctcgttac 69681 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||| |||||||||| | ||||| || ||||||||| Sbjct: 69680 tggcaagtcactttactcgtaccgtaatgcatgatcccgtg 69640 Score = 73.8 bits (37), Expect = 8e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70032 cggaccattctggaactcctcgtgacgtccgggatctcatccgggactc 69984 Score = 50.1 bits (25), Expect = 0.012 Identities = 43/49 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||| |||||||||| |||||||||||||||| Sbjct: 14079 cggaccattccggaactcctcatgacgtccggaatctcatccgggactc 14031 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 ||||| ||||||||| |||||||||||||||| Sbjct: 20924 cctcgcgacgtccggaatctcatccgggactc 20893
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 56888 gtatgttacttgcccgagattcgatcgtcggtatcttaatacctagttcaatctcgttac 56829 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 56828 cggcaagtctctttactcgttccgtaataca 56798 Score = 101 bits (51), Expect = 4e-18 Identities = 109/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | ||||||| || ||| || Sbjct: 50855 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgacagagacacgtc 50796 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 50795 tccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctacga 50736 Query: 557 agatctt 563 ||||||| Sbjct: 50735 agatctt 50729 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 58570 gtatgttacttgcccgagattcgatcgtcggtatcttaatacctagttcaatctcgttac 58511 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 58510 cggcaagtctctttactcgtttcgtaataca 58480 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||| |||| Sbjct: 50682 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcattac 50624 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 50623 cggcaagtctctttactcgttccgtaataca 50593 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| |||||||||||| |||||||| ||||| ||||||| |||||||| |||||| Sbjct: 65385 tatgttacttgcccgagatttgatcgtcggtatcttaatacctagttcaatcttgttacc 65326 Query: 686 aacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 65325 ggcaagtctctttactcgttccgtaataca 65296 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 163850 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 163791 Query: 685 caacaagtatctttactc 702 ||||| ||||||||| Sbjct: 163790 tggcaagtctctttactc 163773 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 43983 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 43924 Query: 555 gaagatctt 563 ||| ||||| Sbjct: 43923 gaatatctt 43915 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||| Sbjct: 53899 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctat 53840 Query: 555 gaagatctt 563 ||||||||| Sbjct: 53839 gaagatctt 53831 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| || |||||||||| Sbjct: 43868 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagatctatctcgttac 43810 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 43809 cggcaagtctctttactcgttccgtaataca 43779 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||||||| Sbjct: 53784 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttaa 53726 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 53725 aggcaagtctctttactcgttccgtaataca 53695 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 65559 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacatc 65500 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| ||||||| |||||| |||||||||| Sbjct: 65499 tccggtcaataaccaatagcggaacctggatgcttatattggctcctacatattctacga 65440 Query: 557 agatctt 563 ||||||| Sbjct: 65439 agatctt 65433 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| ||||||| ||||| ||||||| Sbjct: 72329 gtatgttacttgcccgagattcgatcgtcggtatcttaatacctagttcaacctcgttat 72270 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 72269 cggcaagtctctttactcgtttcgtaataca 72239 Score = 83.8 bits (42), Expect = 8e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| || |||||||| |||| |||||| ||||||||| |||| | ||||| Sbjct: 183164 attccctttgtcaattggtatgttacttgctcgagatccgatcgtcggtatcccaatacc 183105 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | |||||||| ||||||| ||||| |||||||||| | ||||| || ||||||||| Sbjct: 183104 tcgttcaatcttgttaccagcaagtcactttactcgtaccgtaatgcatgatcccgtg 183047 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||| Sbjct: 27749 ttgcccgagattcgatcgtcggtatccttataccttgttcaatctcgttaccggcaagtc 27690 Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||| |||| ||| |||||||| Sbjct: 27689 tctttactcgttccgtaacacatcatcccgtg 27658 Score = 77.8 bits (39), Expect = 5e-11 Identities = 106/127 (83%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || || || Sbjct: 72502 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacatgtc 72443 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| ||| || |||||||||| Sbjct: 72442 tccggtcaataaccaatagcggaacctggatgctcatattggctcccacatattctacga 72383 Query: 557 agatctt 563 ||||||| Sbjct: 72382 agatctt 72376 Score = 73.8 bits (37), Expect = 8e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| | |||||||||| |||||||| ||| || |||||||| Sbjct: 57003 tctccggtcaataaccaatagcggaacctggatgctcatattggctcccacatattctac 56944 Query: 555 gaagatctt 563 ||||||||| Sbjct: 56943 gaagatctt 56935 Score = 73.8 bits (37), Expect = 8e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| | ||||||||| |||||||| |||||| |||||||| Sbjct: 58685 tctccggtcaataaccaatagcagaacctggatgttcatattggctcctacgtattctac 58626 Query: 555 gaagatctt 563 ||||||||| Sbjct: 58625 gaagatctt 58617 Score = 69.9 bits (35), Expect = 1e-08 Identities = 95/115 (82%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| |||| |||||| ||||||||| |||| | ||||| Sbjct: 176307 attccctttgtcaatcggtatgttacttgctcgagatccgatcgtcggtatcccaatacc 176248 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatccc 722 | |||||||| ||||||| ||||| |||||||||| | ||||| || |||||| Sbjct: 176247 tcgttcaatcttgttaccagcaagtcactttactcgtaccgtaatgcatgatccc 176193 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 28050 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 28002 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 176582 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 176534 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 183439 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 183391 Score = 65.9 bits (33), Expect = 2e-07 Identities = 88/105 (83%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || | | |||| ||||||| ||||||| | Sbjct: 184544 cgggttcgagaactatgtagacatgaccgagactcatctcttgtcaataaccaatagcag 184485 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||| ||||||||| Sbjct: 184484 aacctggatgctcatattggttcctacatattctatgaagatctt 184440 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 gatctcatccgggactctgaa 387 ||||||||||||||||||||| Sbjct: 65629 gatctcatccgggactctgaa 65609
>emb|CT009586.1| Triticum aestivum Length = 107638 Score = 109 bits (55), Expect = 1e-20 Identities = 110/127 (86%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 18403 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 18462 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 18463 tccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctacga 18522 Query: 557 agatctt 563 ||||||| Sbjct: 18523 agatctt 18529 Score = 109 bits (55), Expect = 1e-20 Identities = 83/91 (91%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 18576 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 18634 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 18635 cggcaagtctctttactcgttctgtaataca 18665 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 53403 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 53462 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 53463 cggcaagtctctttactcgtttcgtaataca 53493 Score = 101 bits (51), Expect = 4e-18 Identities = 109/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| ||||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 53230 aaccttaagtgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 53289 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 53290 tccggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctacga 53349 Query: 557 agatctt 563 ||||||| Sbjct: 53350 agatctt 53356 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 628 tgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaa 687 ||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||| Sbjct: 46615 tgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttaccgg 46674 Query: 688 caagtatctttactcgtt 705 ||||| |||||||||||| Sbjct: 46675 caagtctctttactcgtt 46692 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||| || Sbjct: 67931 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattcaac 67990 Query: 555 gaagatctt 563 ||||||||| Sbjct: 67991 gaagatctt 67999 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| ||||||||| | |||||| |||| | ||| | |||||||| || ||| || Sbjct: 46439 aaccttaagcgtgcagaccctacgggtttgagaacaatgtagacatgaccgagacacgtc 46498 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| | ||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 46499 tccggtcaataactaatagcagaacctggatgctcatattggctcctacatattctacga 46558 Query: 557 agatctt 563 ||||||| Sbjct: 46559 agatctt 46565 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||| | ||||||||||||||||||||| |||| | ||||||| ||||||||| |||| Sbjct: 61056 gtatgtcacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcattac 61114 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 61115 cggcaagtctctttactcgttccgtaataca 61145 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 499 cggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaag 558 ||||||||| ||||||| ||||||||||||||||||||| |||||| ||||| |||||| Sbjct: 60945 cggtcaataaccaatagcgggacctggatgcccatattggctcctacatattcaacgaag 61004 Query: 559 atctt 563 ||||| Sbjct: 61005 atctt 61009 Score = 77.8 bits (39), Expect = 5e-11 Identities = 79/91 (86%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||| | ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 68046 gtatgtcacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 68104 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| | ||||||| ||| |||||||| Sbjct: 68105 cggcaagtctatttactcattccgtaataca 68135 Score = 69.9 bits (35), Expect = 1e-08 Identities = 107/131 (81%) Strand = Plus / Minus Query: 595 aatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcg 654 |||| |||||| |||||||||||| | ||| |||| | ||| |||| |||||||||| Sbjct: 43491 aatcccgtatacaattccctttgtcaatcggtacgttactcgcctgagactcgatcgtcg 43432 Query: 655 atatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaatac 714 |||| | |||||| ||||||||||||||| ||||| |||||||||| ||||||| | Sbjct: 43431 gtatcccaatacctcattcaatctcgttaccggcaagtcactttactcgtactgtaatgc 43372 Query: 715 aagatcccgtg 725 | ||||||||| Sbjct: 43371 atgatcccgtg 43361 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 36722 cctcgtgacgtccgggatctcatccgggactc 36691 Score = 63.9 bits (32), Expect = 8e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaac 391 |||| ||||||||||||||||||||||||||| ||||||| Sbjct: 43736 cctcatgacgtccgggatctcatccgggactccgaaaaac 43697 Score = 58.0 bits (29), Expect = 5e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 636 gcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatc 695 |||||||| || ||||||| |||| | |||||| ||||||||||||||| ||||| | Sbjct: 36436 gcccgagactcaatcgtcggtatcccaatacctcgttcaatctcgttaccggcaagtcac 36377 Query: 696 tttactcgttctgtaatacaagatcccgt 724 ||||||||| | ||||| || |||||||| Sbjct: 36376 tttactcgtaccgtaatgcatgatcccgt 36348 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| |||| |||||||||||||||| ||||||| Sbjct: 18317 cctcgtcatgtccgtgatcacatccgggactctgaacaaccttc 18360
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 7645 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 7704 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 7705 cggcaagtctctttactcgtttcgtaataca 7735 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||||| |||||||||||||| Sbjct: 34358 gtatgttacttgcccgagattcgatcgtcggtatcccaatacctcgttcaatctcgttac 34299 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| |||||||||| | ||||| || ||||||||| Sbjct: 34298 cggcaagtcactttactcgtaccgtaatgcatgatcccgtg 34258 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||| ||||| |||| |||||||| ||||||||| |||| Sbjct: 259754 gtatgttacttgcccgagattcgagcgtcggtatccacatacctagttcaatctctttac 259695 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 259694 cggcaagtctctttactcgtttcgtaataca 259664 Score = 83.8 bits (42), Expect = 8e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| | || |||||||| ||||||||| |||| Sbjct: 260578 gtatgttacttgcccgagattcgatcgtcggtgtcatcatacctagttcaatctcattac 260519 Query: 685 caacaagtatctttactcgttc 706 | ||||| ||||||||||||| Sbjct: 260518 cggcaagtctctttactcgttc 260497 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||||| |||||||||||||| Sbjct: 40503 gtatgttacttgcccgagattcgatcgtcggtatcccaatacctcgttcaatctcgttac 40444 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||| |||||||||| | ||||| || ||||||||| Sbjct: 40443 tggcaagtcactttactcgtaccgtaatgcatgatcccgtg 40403 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||||||| ||| | |||||| |||||||||||||| Sbjct: 53370 gtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaatctcgttac 53311 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 53310 cggcaagtctctttactcgttccgtaacacatcatcccgtg 53270 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||||||| ||| | |||||| |||||||||||||| Sbjct: 60246 gtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaatctcgttac 60187 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 60186 cggcaagtctctttactcgttccgtaacacatcatcccgtg 60146 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || | | |||||||| |||| ||||||| | Sbjct: 259906 cgggttcgagaactatgtagacatgaccgagacgcctctccggtaaataaccaatagcgg 259847 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 259846 aacctggatgctcatattggctcctacatattctacgaagatctt 259802 Score = 77.8 bits (39), Expect = 5e-11 Identities = 106/127 (83%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 7472 aaccttaaacgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 7531 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||| ||||||| ||||||| | |||||||||| |||||||| ||| || |||||||||| Sbjct: 7532 tccagtcaataaccaatagcggaacctggatgctcatattggctcccacatattctacga 7591 Query: 557 agatctt 563 ||||||| Sbjct: 7592 agatctt 7598 Score = 75.8 bits (38), Expect = 2e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 463 gttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggac 521 |||||||| ||||| | |||||| | || ||| ||||||||||||| ||||||| | || Sbjct: 260726 gttcgagaactatgtagacatgatcgagacacatctccggtcaataaccaatagcggaac 260667 Query: 522 ctggatgcccatattggatcctacttattctacgaagatctt 563 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 260666 ctggaggctcatattggctcctacatattctacgaagatctt 260625 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaac 391 |||| ||||| |||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 34650 cggaccattccggaactcctcgtgacgtccgagatctcatccgggactccgaaaaac 34594 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 40795 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 40747 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||| |||||||||||||||||||||||||| Sbjct: 60537 cggaccattccggaactcctcgggacgtccgggatctcatccgggactc 60489 Score = 50.1 bits (25), Expect = 0.012 Identities = 43/49 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||| ||||||| |||||||||||||||||| Sbjct: 53661 cggaccattccggaactcctcgggacgtccaggatctcatccgggactc 53613
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 109 bits (55), Expect = 1e-20 Identities = 92/103 (89%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | ||||||||||| ||| ||||||||||||| ||||||| ||| Sbjct: 47501 ggttcgagaacaatgtagacatgaccaagacacgtctccggtcaataaccaatagcggga 47442 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 47441 cctggatgcccatattggctcctacatattctacgaagatctt 47399 Score = 109 bits (55), Expect = 1e-20 Identities = 92/103 (89%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | ||||||||||| ||| ||||||||||||| ||||||| ||| Sbjct: 54481 ggttcgagaacaatgtagacatgaccaagacacgtctccggtcaataaccaatagcggga 54422 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 54421 cctggatgcccatattggctcctacatattctacgaagatctt 54379 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||| ||| |||| | ||||||| |||||||||||||| Sbjct: 13832 gtatgttacttgcccgagattcgatcatcggtatc-caatacctagttcaatctcgttac 13774 Query: 685 caacaagtatctttactcgttctgtaataca 715 || ||||| ||||||||||||| |||||||| Sbjct: 13773 cagcaagtctctttactcgttccgtaataca 13743 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 41146 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 41088 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 41087 cggcaagtctctttactcgttccgtaataca 41057 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 41295 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 41236 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 41235 cctggatgcccatattggctcctacatattctacgaagatctt 41193 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 56935 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 56877 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 56876 cggcaagtctctttactcgttccgtaataca 56846 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 57084 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 57025 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 57024 cctggatgcccatattggctcctacatattctacgaagatctt 56982 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 64304 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 64245 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 64244 cctggatgcccatattggctcctacatattctacgaagatctt 64202 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 64155 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 64097 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 64096 tcgcaagtctctttactcgttccgtaataca 64066 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||| ||||| Sbjct: 47352 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatcttgttac 47294 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 47293 tggcaagtctctttactcgttccgtaataca 47263 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||| ||||| Sbjct: 54332 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatcttgttac 54274 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 54273 tggcaagtctctttactcgttccgtaataca 54243 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 13983 cgggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcgg 13924 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||| ||||| |||||||| |||||| ||||||||||||||||| Sbjct: 13923 aacctagatgctcatattggctcctacatattctacgaagatctt 13879 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 54588 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 54545 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 57191 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 57148
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 109 bits (55), Expect = 1e-20 Identities = 110/127 (86%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 8103 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 8162 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 8163 tccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctacga 8222 Query: 557 agatctt 563 ||||||| Sbjct: 8223 agatctt 8229 Score = 109 bits (55), Expect = 1e-20 Identities = 83/91 (91%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 8276 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 8334 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 8335 cggcaagtctctttactcgttctgtaataca 8365 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| |||| |||||||||||||||| ||||||| Sbjct: 8017 cctcgtcatgtccgtgatcacatccgggactctgaacaaccttc 8060
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 100450 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 100391 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 100390 cggcaagtctctttactcgtttcgtaataca 100360 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 107258 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 107199 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 107198 cggcaagtctctttactcgtttcgtaataca 107168 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 ||||||||||||| | |||||||| |||| |||||||||||| ||| ||| | |||||| Sbjct: 54054 attccctttgtccatcggtatgttacttgctcgagattcgatcatcggtatattcatacc 53995 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaata 713 || ||||||||| ||||| ||||||||||||||||||| |||||| Sbjct: 53994 tagttcaatctcattacccgcaagtatctttactcgttccgtaata 53949 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 ||||||||||||| | |||||||| ||||||||||||||||| | | ||||| |||||| Sbjct: 41763 attccctttgtccatcggtatgttacttgcccgagattcgatcataggtatcttcatacc 41704 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaataca 715 || |||||||||||||| ||||| |||||||| |||| |||||||| Sbjct: 41703 tagttcaatctcgttactggcaagtctctttacttgttcagtaataca 41656 Score = 93.7 bits (47), Expect = 9e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 100623 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 100564 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 100563 tccggtcaataaccaatagaggaacctggatgctcatattggctcctacatattctacga 100504 Query: 557 agatctt 563 ||||||| Sbjct: 100503 agatctt 100497 Score = 93.7 bits (47), Expect = 9e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 107431 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacgtc 107372 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||||| Sbjct: 107371 tccggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctacga 107312 Query: 557 agatctt 563 ||||||| Sbjct: 107311 agatctt 107305 Score = 87.7 bits (44), Expect = 5e-14 Identities = 235/296 (79%), Gaps = 2/296 (0%) Strand = Plus / Minus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || Sbjct: 20284 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgaga 20225 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattggatcctacttatt 550 ||||||||||||||| |||| || ||| |||||| ||||| |||| ||| || | || Sbjct: 20224 tgactctccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgtt 20165 Query: 551 ctacgaagatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcat 609 | |||| ||||| |||| ||| || | ||||||||| ||| | |||| |||||| || Sbjct: 20164 ccacgatgatctcatcggatgaaccacgatgtcaaggacttaatcaatcccgtatacaat 20105 Query: 610 tccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccataccta 669 |||||||||| |||| || ||||||||||||||||||||| ||| | |||||| Sbjct: 20104 tccctttgtctagcggtattatacttgcccgagattcgatcgtcggtataccgatacctt 20045 Query: 670 tttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 20044 gttcaatctcgttaccggcaagtctctttactcgttccgtaacacatcatcccgtg 19989 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||| | || ||| ||||| ||||||| |||||| | Sbjct: 41899 cgggttcgagaactatgtagacatgagcgagacacctctccagtcaataagcaatagcgg 41840 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 41839 aacttggatgcccatattggctcctacatattctacgaagatctt 41795 Score = 67.9 bits (34), Expect = 5e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 494 ctctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattcta 553 ||||| |||||||| ||||||| | ||||||||||||||||||| |||||| ||||||| Sbjct: 54152 ctctctggtcaataaccaatagcggaacctggatgcccatattggctcctacatattcta 54093 Query: 554 cgaagatctt 563 ||| ||||| Sbjct: 54092 agaatatctt 54083 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 20381 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 20333
>gb|AF339051.1| Triticum monococcum WIS-2-1A Ty1-copia-like retrotransposon, complete sequence Length = 9682 Score = 107 bits (54), Expect = 6e-20 Identities = 232/290 (80%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || || Sbjct: 1569 gaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgagatgttc 1510 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| |||| || ||| |||||| ||||| |||| ||| || | ||| |||| Sbjct: 1509 tccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgttccacga 1450 Query: 557 agatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||| |||| ||| || | ||||||||| ||| | |||| |||||| |||||||| Sbjct: 1449 tgatctcatcggatgaaccacgatgtcaaggacttaatcaatcccgtatacaattccctt 1390 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 ||||| | ||| | || ||||||||||||||||||||| |||| | |||||| ||||| Sbjct: 1389 tgtccatcggtacgatacttgcccgagattcgatcgtcggtatcccgataccttgttcaa 1330 Query: 676 tctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 1329 tctcgttaccggcaagtctctttactcgttccgtaacacatcatcccgtg 1280 Score = 99.6 bits (50), Expect = 1e-17 Identities = 231/290 (79%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || || Sbjct: 8522 gaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgagatgttc 8463 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| |||| || ||| |||||| ||||| |||| ||| || | ||| |||| Sbjct: 8462 tccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgttccacga 8403 Query: 557 agatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||| |||| ||| || | ||||||||| ||| | |||| |||||| |||||||| Sbjct: 8402 tgatctcatcggatgaaccacgatgtcaaggacttaatcaatcccgtatacaattccctt 8343 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 ||||| | ||| | || |||||| |||||||||||||| |||| | |||||| ||||| Sbjct: 8342 tgtccatcggtacgatacttgcccaagattcgatcgtcggtatcccgataccttgttcaa 8283 Query: 676 tctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 8282 tctcgttaccggcaagtctctttactcgttccgtaacacatcatcccgtg 8233 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1671 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 1623 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||| ||||||||||||||||||||||||| Sbjct: 8624 cggaccattccggaactcctcgtaacgtccgggatctcatccgggactc 8576
>emb|Y18782.2|HEUY18782 Hordeum euclaston BARE-1 long terminal repeat DNA (HEUCC) Length = 1132 Score = 107 bits (54), Expect = 6e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 609 ttccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacct 668 |||||||||||| | ||||| | |||||| ||||||||||||| ||||||||||||| Sbjct: 689 ttccctttgtccatcaatatgtcacttgcccaagattcgatcgtcagtatctccatacct 630 Query: 669 atttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatccc 722 | |||||| || |||||||||||| |||||||||||| ||||||||||||||| Sbjct: 629 agttcaatatcattaccaacaagtctctttactcgtttcgtaatacaagatccc 576
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 105 bits (53), Expect = 2e-19 Identities = 93/105 (88%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 168788 cgggttcgagaactatgtagacatgaccgagacacgtctccggtcaataaccaatagcgg 168847 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 168848 gacctggatgcccatattgactcctacatattctacgaagatctt 168892 Score = 105 bits (53), Expect = 2e-19 Identities = 93/105 (88%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 175626 cgggttcgagaactatgtagacatgaccgagacacgtctccggtcaataaccaatagcgg 175685 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 175686 gacctggatgcccatattgactcctacatattctacgaagatctt 175730 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||||||| Sbjct: 168939 gtatgttacttgcccgagatttgatcgtcggtatctcgatacctagttcaatctcgttac 168998 Query: 685 caacaagtatctttactcgttctgtaa 711 | ||||| ||||||||||||| |||| Sbjct: 168999 cggcaagtctctttactcgttccgtaa 169025 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||||||| Sbjct: 175777 gtatgttacttgcccgagatttgatcgtcggtatctcgatacctagttcaatctcgttac 175836 Query: 685 caacaagtatctttactcgttctgtaa 711 | ||||| ||||||||||||| |||| Sbjct: 175837 cggcaagtctctttactcgttccgtaa 175863 Score = 95.6 bits (48), Expect = 2e-16 Identities = 236/296 (79%), Gaps = 2/296 (0%) Strand = Plus / Minus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || Sbjct: 4495 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgaga 4436 Query: 492 cac-tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttatt 550 | | ||||||||||||| |||| || ||| |||||| ||||| |||| ||| || | || Sbjct: 4435 cgcctctccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgtt 4376 Query: 551 ctacgaagatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcat 609 | |||| ||||| |||| ||| || | ||||| |||||| | | |||| ||||| || Sbjct: 4375 ccacgatgatctcatcggatgaaccacggtgtcgaggattcaatcaatcccgtatgcaat 4316 Query: 610 tccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccataccta 669 |||||||||| | ||| |||| ||||||||||||||||||||| |||| | |||||| Sbjct: 4315 tccctttgtcaatcggtaagttacttgcccgagattcgatcgtcggtatcccaatacctt 4256 Query: 670 tttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 4255 gttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 4200 Score = 93.7 bits (47), Expect = 9e-16 Identities = 220/275 (80%), Gaps = 2/275 (0%) Strand = Plus / Minus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || Sbjct: 11382 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgaga 11323 Query: 492 cac-tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttatt 550 | | ||||||||||||| |||| || ||| |||||| ||||| |||| ||| || | || Sbjct: 11322 cgcctctccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgtt 11263 Query: 551 ctacgaagatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcat 609 | |||| ||||| |||| ||| || | ||||| |||||| | | |||| ||||| || Sbjct: 11262 ccacgatgatctcatcggatgaaccacggtgtcgaggattcaatcaatcccgtatgcaat 11203 Query: 610 tccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccataccta 669 |||||||||| | ||| |||| ||||||||||||||||||||| |||| | |||||| Sbjct: 11202 tccctttgtcaatcggtaagttacttgcccgagattcgatcgtcggtatcccaatacctt 11143 Query: 670 tttcaatctcgttaccaacaagtatctttactcgt 704 ||||||||||||||| ||||| ||||||||||| Sbjct: 11142 gttcaatctcgttaccggcaagtctctttactcgt 11108 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 87011 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 87070 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 87071 ttgttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 87128 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 94056 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 94115 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 94116 ttgttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 94173 Score = 87.7 bits (44), Expect = 5e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| ||||| || |||| |||||||||||||| Sbjct: 45635 gtatgttacttgcccgagattcgatcgtcggtatcttaattcctagttcaatctcgttac 45694 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| ||| ||||||||| ||||| Sbjct: 45695 cggcaagtctctgtactcgttccgtaat 45722 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| | |||||||||||||||| Sbjct: 4618 acttcctatatataattcttcacctccggaccattccggaacctctcgtgacgtccggga 4559 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 4558 tctcatccgggactc 4544 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| | |||||||||||||||| Sbjct: 11505 acttcctatatataattcttcacctccggaccattccggaacctctcgtgacgtccggga 11446 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 11445 tctcatccgggactc 11431 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 353 ctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||||||||||||||||||||| Sbjct: 86755 ctcgtgacgtccgggatctcatccgggactc 86785 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 353 ctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||||||||||||||||||||| Sbjct: 93800 ctcgtgacgtccgggatctcatccgggactc 93830 Score = 58.0 bits (29), Expect = 5e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 |||| |||||||| ||||||| | ||||||||| |||||||| ||| || |||||||| Sbjct: 45520 tctctggtcaataaccaatagcggaacctggatgttcatattggctcccacatattctac 45579 Query: 555 gaagatctt 563 ||||||||| Sbjct: 45580 gaagatctt 45588
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 103 bits (52), Expect = 9e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 213050 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 212991 Query: 685 caacaagtatctttactcgt 704 | ||||| ||||||||||| Sbjct: 212990 cggcaagtctctttactcgt 212971 Score = 93.7 bits (47), Expect = 9e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 194666 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttac 194607 Query: 685 caacaagtatcttta 699 | ||||| |||||| Sbjct: 194606 cggcaagtctcttta 194592 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| | |||||| ||||||||||||||| ||||| Sbjct: 64894 ttgcccgagattcgatcgtcggtatcccgataccttgttcaatctcgttaccggcaagtc 64953 Query: 694 tctttactcgtt 705 |||||||||||| Sbjct: 64954 tctttactcgtt 64965 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 638 ccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctt 697 ||||||||||||||||| |||| | |||||| ||||||||||||| | ||||| |||| Sbjct: 59433 ccgagattcgatcgtcggtatcccgataccttgttcaatctcgttatcggcaagtctctt 59492 Query: 698 tactcgttctgtaa 711 |||||||||||||| Sbjct: 59493 tactcgttctgtaa 59506 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| |||||| ||||||| || Sbjct: 194779 tccggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctatga 194720 Query: 557 agatctt 563 ||||||| Sbjct: 194719 agatctt 194713 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| |||||||| | || ||||||| |||||||| |||||| |||||||||| Sbjct: 213163 tccggtcaataaccaatagtggaacttggatgctcatattggctcctacatattctacga 213104 Query: 557 agatctt 563 | ||||| Sbjct: 213103 aaatctt 213097 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 197178 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 197226 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| |||||||||| |||||||||| |||| | ||||| Sbjct: 18756 attccctttgtcaatcggtacgttacttgcccgagactcgatcgtcggtatcccaatacc 18815 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | || | |||||||||| ||||| |||||||||| | ||||| || ||||||||| Sbjct: 18816 ttgtttagtctcgttaccggcaagtcactttactcgtaccgtaatgcatgatcccgtg 18873 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| |||||||||| || ||||||| |||| | ||||| Sbjct: 25791 attccctttgtcaatcggtacgttacttgcccgagactcaatcgtcggtatcccaatacc 25850 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | |||| |||||||||| ||||| |||||||||| | ||||| || ||||||||| Sbjct: 25851 ttgttcagtctcgttaccggcaagtcactttactcgtaccgtaatgcatgatcccgtg 25908 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 203945 cggaccattccggaactcctcgtgatgtccgggatctcatccgggactc 203993 Score = 58.0 bits (29), Expect = 5e-05 Identities = 84/101 (83%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||| ||| ||||||||||||||||||||| |||| |||||| ||||||||||||| Sbjct: 204236 gtattttacttgcccgagattcgatcgtcggtatc-aaataccttgttcaatctcgttat 204294 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| |||||||||||| |||| ||| |||||||| Sbjct: 204295 cggcaagtcactttactcgttccgtaacacatcatcccgtg 204335 Score = 50.1 bits (25), Expect = 0.012 Identities = 83/101 (82%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||| ||| ||||||||||||||||||||| |||| |||||| ||||||||||||| Sbjct: 197469 gtattttacttgcccgagattcgatcgtcggtatc-aaataccttgttcaatctcgttat 197527 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||| |||||||||||| |||| ||| |||||||| Sbjct: 197528 aggcaagtcactttactcgttccgtaacacatcatcccgtg 197568 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||| ||||| |||||||||||| Sbjct: 18498 cctcgtgacgtccaggatcccatccgggactc 18529 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||| ||||| |||||||||||| Sbjct: 25533 cctcgtgacgtccaggatcccatccgggactc 25564 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| |||| |||||||||||||||| ||||||| Sbjct: 194925 cctcgtcatgtccgtgatcacatccgggactctgaacaaccttc 194882 Score = 48.1 bits (24), Expect = 0.046 Identities = 96/120 (80%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| |||| ||||| |||||||||| |||| | ||||| Sbjct: 209479 attccctttgtcaatcggtacgttacttgctcgagactcgatcgtcggtatcccaatacc 209538 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtggc 727 | |||| ||||||||| ||||| |||||||||| | ||| | || ||||||||||| Sbjct: 209539 ttgttcagtctcgttactggcaagtcactttactcgtaccgtagtgcatgatcccgtggc 209598 Score = 46.1 bits (23), Expect = 0.18 Identities = 26/27 (96%) Strand = Plus / Plus Query: 356 gtgacgtccgggatctcatccgggact 382 ||||||| ||||||||||||||||||| Sbjct: 64615 gtgacgttcgggatctcatccgggact 64641
>gb|DQ666286.1| Triticum monococcum subsp. aegilopoides transposon Ty1/copia Angela_BAC5, complete sequence Length = 8558 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||| |||||| Sbjct: 675 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatcccgttac 617 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 616 cggcaagtctctttactcgttctgtaataca 586 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||| ||| |||| | ||||||| |||||||||||||| Sbjct: 7489 gtatgttacttgcccgagattcgatcatcggtatc-caatacctagttcaatctcgttac 7431 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 7430 cggcaagtttctttactcgttctgtaataca 7400 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 7639 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 7580 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 7579 cctggatgcccatattggctcctacatattctatgaagatctt 7537 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||| || Sbjct: 791 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattgtat 732 Query: 555 gaagatctt 563 ||||||||| Sbjct: 731 gaagatctt 723
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 175180 gtatgttacttgcccgagattcgatcgttagtatctcaatacctagttcaatctcgttac 175239 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 175240 cggcaagtctctttactcgttccgtaataca 175270 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||||| ||||||| |||||||||||||| Sbjct: 145832 gtatgttacttgcccgagattcgatcgttggtatctcaatacctagttcaatctcgttac 145773 Query: 685 caacaagtatctttactcgttctgtaat 712 ||||| ||||||||||||| ||||| Sbjct: 145772 tggcaagtctctttactcgttccgtaat 145745 Score = 93.7 bits (47), Expect = 9e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||| | |||||| ||||||||||||||| Sbjct: 103554 tatgttacttgcccgagattcgatcgtcggtatcccaataccttgttcaatctcgttacc 103613 Query: 686 aacaagtatctttactcgttctgtaatacaagatcccgtggct 728 ||||| ||||||||||| | | ||| || |||||||||||| Sbjct: 103614 ggcaagtctctttactcgtaccgcaatgcatgatcccgtggct 103656 Score = 93.7 bits (47), Expect = 9e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||| | |||||| ||||||||||||||| Sbjct: 110598 tatgttacttgcccgagattcgatcgtcggtatcccaataccttgttcaatctcgttacc 110657 Query: 686 aacaagtatctttactcgttctgtaatacaagatcccgtggct 728 ||||| ||||||||||| | | ||| || |||||||||||| Sbjct: 110658 ggcaagtctctttactcgtaccgcaatgcatgatcccgtggct 110700 Score = 93.7 bits (47), Expect = 9e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| || |||||||||||||||||| |||||| ||||||| ||||||||| |||| Sbjct: 182014 gtatgttactttcccgagattcgatcgtcggtatctcaatacctagttcaatctcattac 182073 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| ||| |||| Sbjct: 182074 cggcaagtctctttactcgttccgtagtaca 182104 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||||||||| | |||||||| || ||| | ||||||||||| ||||||| | Sbjct: 175029 cgggttcgagagctatgtagacatgaccgagacacgtttccggtcaataaccaatagcgg 175088 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||||||||||||| Sbjct: 175089 aacctggatgctcatattggctcccacatattctacgaagatctt 175133 Score = 83.8 bits (42), Expect = 8e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| ||||||||||||||||||||| |||| | ||||| Sbjct: 77102 attccctttgtcaatcggtaagttacttgcccgagattcgatcgtcggtatcccaatacc 77043 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 77042 ttgttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 76985 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 629 gttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaac 688 |||| ||||||||||||||| | || |||||| ||||||| ||||||||||||||| | Sbjct: 156358 gttacttgcccgagattcgaatgccggtatctcaatacctagttcaatctcgttaccggc 156299 Query: 689 aagtatctttactcgttctgtaat 712 |||| ||||||||||||| ||||| Sbjct: 156298 aagtctctttactcgttccgtaat 156275 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | ||||| | |||| ||||| |||| ||||||||||||||||| Sbjct: 77403 acttcctatatataattcttcatctccggaccattccggaactcctcgtgacgtccggga 77344 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 77343 tctcatccgggactc 77329 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| |||||||||| ||||||||||||||||| Sbjct: 84450 acttcctatatataattcttcacctccggaccattctggaactcctcgtgacgtccggga 84391 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 84390 tctcatccgggactc 84376 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| ||||||||||||||||| ||| |||| | ||||| Sbjct: 84149 attccctttgtcaatcggtaagttacttgcccgagattcgatcatcggtatcccaatacc 84090 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 84089 ttgttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 84032 Score = 73.8 bits (37), Expect = 8e-10 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| || || | |||||||| || ||| | ||||||||||| ||||||| | Sbjct: 181864 cgggttcgagaactttgtagacatgaccgagacacgtttccggtcaataaccaatagcgg 181923 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || ||||||||||||||||| Sbjct: 181924 aacctggatgctcatattggctcccacatattctacgaagatctt 181968 Score = 71.9 bits (36), Expect = 3e-09 Identities = 88/104 (84%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 461 gggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgg 519 |||| ||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 145982 gggtccgagaactatgtagacatgaccgagacacgtctccggtcaataaccaatagcaga 145923 Query: 520 acctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| ||| || |||||||| |||||||| Sbjct: 145922 acctggatgctcatattggctcccacatattctacaaagatctt 145879 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| ||||||||||||||||| Sbjct: 110279 acttcctatatataattcttcacctccggaccattccggaactcctcgtgacgtccggga 110338 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 110339 tctcatccgggactc 110353 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 103278 cctcgtgacgtccgggatctcatccgggactc 103309 Score = 54.0 bits (27), Expect = 7e-04 Identities = 107/131 (81%), Gaps = 2/131 (1%) Strand = Plus / Minus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| |||| |||| |||| |||| | ||||||||||| ||||| | ||||||| | Sbjct: 156542 catcaccgaacgttaagcgtgcggaccctacgggttcgagaactatgtaggcatgaccga 156483 Query: 490 ggcac-tctccggtcaatatccaatagttggacctggatgcccatattggatcctactta 548 | ||| ||||||||||||| ||||||| | |||| |||| |||||||| ||| || || Sbjct: 156482 gacacgtctccggtcaataaccaatagc-gaacctagatgttcatattggctcccacata 156424 Query: 549 ttctacgaaga 559 ||||||||||| Sbjct: 156423 ttctacgaaga 156413
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 1068 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 1127 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 1128 cctggatgcccatattggctcctacatattctacgaagatctt 1170 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||| | ||||||| |||||||||||||| Sbjct: 1216 gtatgttacttgcccgagattcgatcgttggtatc-caatacctagttcaatctcgttac 1274 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 1275 tagcaagtctctttactcgttctgtaataca 1305 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 7934 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 7993 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 7994 cctggatgcccatattggctcctacatattctacgaagatctt 8036 Score = 101 bits (51), Expect = 4e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||| | Sbjct: 23794 gtatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatctcgttgc 23735 Query: 685 caacaagtatctttactcgttctgtaataca 715 | | ||| ||||||||||||| |||||||| Sbjct: 23734 cggctagtctctttactcgttccgtaataca 23704 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 157652 ggttcgagaacaatgcagacatgaccgagacacgtctccggtcaataaccaatagcggga 157711 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 157712 cctggatgcccatattggctcctacatattctacgaagatctt 157754 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 157801 gtatgttacttgcccgagattcgatcgtcgatatc-caatacctagttcaatctcgttac 157859 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 157860 tggcaagtctctttactcgttccgtaataca 157890 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 165720 ggttcgagaacaatgcagacatgaccgagacacgtctccggtcaataaccaatagcggga 165779 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 165780 cctggatgcccatattggctcctacatattctacgaagatctt 165822 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 165869 gtatgttacttgcccgagattcgatcgtcgatatc-caatacctagttcaatctcgttac 165927 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 165928 tggcaagtctctttactcgttccgtaataca 165958 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||| ||||| |||| | ||||||| |||||||||||||| Sbjct: 8082 gtatgttacttgcccgagattcgaccgtcggtatc-caatacctagttcaatctcgttac 8140 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| |||||||||||||||||||||| Sbjct: 8141 tggcaagtctctttactcgttctgtaataca 8171 Score = 85.7 bits (43), Expect = 2e-13 Identities = 107/127 (84%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | ||||||||||| | | || Sbjct: 23968 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccaagacgcgtc 23909 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | |||||||||| |||||||| ||| || |||||||||| Sbjct: 23908 tccggtcaataaccaatagcggaacctggatgctcatattggctcccacatattctacga 23849 Query: 557 agatctt 563 ||||||| Sbjct: 23848 agatctt 23842 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||||| ||||||| |||||||| ||| || Sbjct: 33469 tatgttacttgcccgagattcgatcgtcggtatctcaatacctagttcaatcttgttgcc 33528 Query: 686 aacaagtatctttactcgtt 705 ||||| ||||||| |||| Sbjct: 33529 ggcaagtctctttacccgtt 33548 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| | |||||| ||||||||||||| | ||||| Sbjct: 123356 ttgcccgagattcgatcgtcggtatcccaatacctcgttcaatctcgttaacggcaagtc 123415 Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 |||||||||| | ||||| || ||||||||| Sbjct: 123416 actttactcgtaccgtaatgcatgatcccgtg 123447 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| | |||||| ||||||||||||| | ||||| Sbjct: 116345 ttgcccgagattcgatcgtcggtatcccaatacctcgttcaatctcgttaacggcaagtc 116404 Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 ||||| |||| | ||||| || ||||||||| Sbjct: 116405 actttaatcgtaccgtaatgcatgatcccgtg 116436 Score = 58.0 bits (29), Expect = 5e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 353 ctcgtgacgtccgggatctcatccgggac 381 ||||||||||||||||||||||||||||| Sbjct: 116062 ctcgtgacgtccgggatctcatccgggac 116090 Score = 50.1 bits (25), Expect = 0.012 Identities = 86/105 (81%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || || ||||||||||||| |||||| | Sbjct: 33317 cgggttcgagaactatgtagacatgaccgagacatgtctccggtcaataatcaatagcgg 33376 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 | |||||||| |||||||| |||||| |||| ||| | |||||| Sbjct: 33377 aatctggatgctcatattggttcctacatattatacaatgatctt 33421 Score = 50.1 bits (25), Expect = 0.012 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 ctcgtgacgtccgggatctcatccgggac 381 |||||||||||| |||||||||||||||| Sbjct: 123073 ctcgtgacgtccaggatctcatccgggac 123101 Score = 48.1 bits (24), Expect = 0.046 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| | | | |||||||| || Sbjct: 123152 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacaagcagacatgaccgaga 123211 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattgg 538 | ||||||||||||||| |||| ||| ||| |||||| ||||| |||| Sbjct: 123212 cgactctccggtcaataaccaacagtgggatctggatacccatgttgg 123259
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 101 bits (51), Expect = 4e-18 Identities = 88/99 (88%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 11630 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 11688 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccg 723 | ||||| ||||||||||||| |||||||| |||||| Sbjct: 11689 cggcaagtctctttactcgttccataatacaacatcccg 11727 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 16246 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 16304 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 16305 cggcaagtctctttactcgttccgtaataca 16335 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 88882 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 88823 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 88822 cctggatgcccatattggctcctacatattctacgaagatctt 88780 Score = 99.6 bits (50), Expect = 1e-17 Identities = 231/290 (79%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||| ||||| | |||||||| || | ||| | |||||||| || | || Sbjct: 158942 gaaccttaagtgtgtagaccctacgggttcgggaaccatgcagacatgaccgagacgttc 158883 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| ||||||| | | |||||| ||||| |||| ||| || | ||| |||| Sbjct: 158882 tccggtcaataaccaatagcggaatctggatacccatgttggctcccacatgttccacga 158823 Query: 557 agatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||| |||| ||| || | ||||||||| ||| | |||| |||||| |||||||| Sbjct: 158822 tgatctcatcggatgaaccacgatgtcaaggacttaatcaatcccgtatacaattccctt 158763 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 |||| | ||| | || ||||||||||||||||||||| |||| | |||||| ||||| Sbjct: 158762 tgtctatcggtacgatacttgcccgagattcgatcgtcggtatcccgataccttgttcaa 158703 Query: 676 tctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||| | ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 158702 tctcgttaacggcaagtctctttactcgttccgtaacacatcatcccgtg 158653 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 73162 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 73103 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 | |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 73102 cttggatgcccatattggctcctacatattctacgaagatctt 73060 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 88733 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 88675 Query: 685 caacaagtatctttactcgttctgtaataca 715 | | ||| ||||||||||||| |||||||| Sbjct: 88674 cggcgagtctctttactcgttccgtaataca 88644 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||| |||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 98666 gtatgttacttgctcgagattcgatcgtcggtatc-cgatacctagttcaatctcgttac 98608 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 98607 cggcaagtctctttactcgttccgtaataca 98577 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 238792 gtatgttacctgcccgagattcgatcgtcggtatcta-atacctagttcaatctcgttac 238734 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 238733 cggcaagtctctttactcgttccgtaataca 238703 Score = 91.7 bits (46), Expect = 3e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcact-ctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || |||| ||| |||||||| ||||||| ||| Sbjct: 16097 ggttcgagaacaatgtagacatgaccgagacacttctctggtcaataaccaatagcggga 16156 Query: 521 cctggatgcccatattggatcctacttattctacgaagatct 562 |||||||||||||||||| |||||| |||||||||||||||| Sbjct: 16157 cctggatgcccatattggctcctacatattctacgaagatct 16198 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||||||| Sbjct: 238907 tctccggtcaataaccaatagcgggacctggatgcccatattggctcccacatattctac 238848 Query: 555 gaagatctt 563 ||||||||| Sbjct: 238847 gaagatctt 238839 Score = 87.7 bits (44), Expect = 5e-14 Identities = 91/104 (87%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| |||| Sbjct: 98816 ggttcgagaacaatgtagacatgaccgagacacatctccggtcaataaccaatagctgga 98757 Query: 521 cctggatgccc-atattggatcctacttattctacgaagatctt 563 ||||||||||| ||||||| |||||| ||||||| ||||||||| Sbjct: 98756 cctggatgcccaatattggctcctacatattctatgaagatctt 98713 Score = 85.7 bits (43), Expect = 2e-13 Identities = 89/103 (86%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcact-ctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || |||| ||| |||||||| ||||||| ||| Sbjct: 11481 ggttcgagaacaatgtagacatgaccgagacacttctctggtcaataaccaatagcggga 11540 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 | |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 11541 catggatgcccatattggctcctacatattctacgaagatctt 11583 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||| || |||||||||||||| Sbjct: 73013 gtatgttacttgcccgagattcgatcgtcggtatc-caatacgtagttcaatctcgttac 72955 Query: 685 caacaagtatctttactcgttctgtaataca 715 | | ||| ||||||||||||| |||||||| Sbjct: 72954 cggcgagtctctttactcgttccgtaataca 72924 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||| | ||||||| ||||||||| |||| Sbjct: 91811 gtatgttacttgcctgagattcgatcgtcggtatc-caatacctagttcaatctcattac 91753 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 91752 cggcaagtctctttactcgttccgtaataca 91722 Score = 83.8 bits (42), Expect = 8e-13 Identities = 88/102 (86%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 463 gttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggac 521 |||||||| | ||| | |||||||| || ||| |||||| |||||| ||||||| |||| Sbjct: 91959 gttcgagaacaatgtagacatgaccgagacacgtctccgatcaataaccaatagcgggac 91900 Query: 522 ctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 91899 ctggatgcccatattgtctcctacatattctacgaagatctt 91858 Score = 79.8 bits (40), Expect = 1e-11 Identities = 80/91 (87%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||| ||||| Sbjct: 5190 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctggttac 5132 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||| ||||||||||||| |||||||| Sbjct: 5131 cggcaag--tctttactcgttccgtaataca 5103 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 501 gtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaagat 560 ||||||| |||||||| ||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 5299 gtcaataaccaatagtgggacctggatgcccatattggctcctacatgttctacgaagat 5240 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||| ||||||||| |||| | |||||| ||||||||||||||| ||||| Sbjct: 76842 ttgcccgagatccgatcgtcggtatcccaatacctcgttcaatctcgttaccggcaagtc 76783 Query: 694 tctttactcgttctgtaatacaagatccc 722 |||||||||| | ||||| || |||||| Sbjct: 76782 actttactcgtaccgtaatgcatgatccc 76754 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 159044 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 158996 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggac 381 |||| ||||| |||| |||||||||||||||||||||||||||||| Sbjct: 77143 cggaccattccggaactcctcgtgacgtccgggatctcatccgggac 77097 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggac 381 |||| ||||| |||| |||||||||||||||||||||||||||||| Sbjct: 84158 cggaccattccggaactcctcgtgacgtccgggatctcatccgggac 84112 Score = 58.0 bits (29), Expect = 5e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||| ||||| ||||||||| |||| | |||||| ||||||||||||||| ||||| Sbjct: 83857 ttgcctgagatccgatcgtcggtatcccaatacctcgttcaatctcgttaccggcaagtc 83798 Query: 694 tctttactcgttctgtaatacaagatccc 722 |||||||||| | ||||| || |||||| Sbjct: 83797 actttactcgtaccgtaatgcatgatccc 83769 Score = 48.1 bits (24), Expect = 0.046 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || Sbjct: 84061 tcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgtagacatgaccgaga 84002 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattgg 538 | ||||||||||||||| |||| || ||| |||||| ||||| |||| Sbjct: 84001 cgactctccggtcaataaccaacagcgggatctggatacccatgttgg 83954
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 101 bits (51), Expect = 4e-18 Identities = 109/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcac-tc 496 |||||||| |||| |||| | ||||||||||| | ||| | |||||||| || ||| || Sbjct: 5251 aaccttaagcgtgcggaccctacgggttcgagaacaatgtagacatgaccgagacacatc 5192 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 || |||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 5191 tctggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctacga 5132 Query: 557 agatctt 563 ||||||| Sbjct: 5131 agatctt 5125 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 12067 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 12009 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 12008 cggcaagtctctttactcgttccgtaataca 11978 Score = 95.6 bits (48), Expect = 2e-16 Identities = 82/92 (89%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 624 cgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgtta 683 ||||||||| ||||||||||||||||| ||| |||| | ||||||| ||||||||||||| Sbjct: 5079 cgtatgttacttgcccgagattcgatcatcggtatc-caatacctagttcaatctcgtta 5021 Query: 684 ccaacaagtatctttactcgttctgtaataca 715 || ||||| ||||||||||||| |||||||| Sbjct: 5020 ccggcaagtctctttactcgttccgtaataca 4989 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| |||||||| |||||||||||| |||| | ||||| Sbjct: 62308 attccctttgtcaatcggtatgttacttgcccgatattcgatcgtcggtatcccaatacc 62367 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| |||||| |||||||||| | ||||| || ||||||||| Sbjct: 62368 tcgttcaatctcgttaccgacaagtcactttactcgtaccgtaatgcatgatcccgtg 62425 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| | ||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 12182 tctccggtcaataacaaatagcgggacctggatgcccatattggctcctacatattctac 12123 Query: 555 gaagatctt 563 ||||||||| Sbjct: 12122 gaagatctt 12114 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||| Sbjct: 50912 ttgcccgagattcgatcgtcggtatcccgataccttgttcaatctcgttacaggcaagtc 50971 Query: 694 tctttactcgttctgtaa 711 ||||||||||||| |||| Sbjct: 50972 tctttactcgttccgtaa 50989 Score = 67.9 bits (34), Expect = 5e-08 Identities = 185/234 (79%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 493 actctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattct 552 |||||| |||||||| |||| || ||| |||||| ||||| |||||||| || | ||| Sbjct: 44140 actctctggtcaataaccaacagcgggatctggatacccatgttggatcccacatgttcc 44199 Query: 553 acgaagatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattc 611 |||| ||||| |||| ||| || | ||||||||| ||| | |||| |||||| |||| Sbjct: 44200 acgatgatctcatcggatgaaccacgatgtcaaggacttaatcaatcccgtatacaattc 44259 Query: 612 cctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatt 671 |||||||| ||| | || ||||||||||||||||||| | |||| |||||| | Sbjct: 44260 cctttgtctagcggtacgatacttgcccgagattcgatcgttggtatcctgataccttgt 44319 Query: 672 tcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 44320 tcaatctcgttacaggcaagtctctttactcgttccgtaacacatcatcccgtg 44373 Score = 63.9 bits (32), Expect = 8e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaac 391 ||||||||||||| |||||||||||||||||| ||||||| Sbjct: 56229 cctcgtgacgtccaggatctcatccgggactccgaaaaac 56268 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||| ||||||| Sbjct: 50628 cctcgtgacgtccgggatctcatcagggactc 50659 Score = 52.0 bits (26), Expect = 0.003 Identities = 92/114 (80%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| || ||||||| |||||||||| |||| | ||||| Sbjct: 41111 attccctttgtcaatcggtacgttactttcccgagactcgatcgtcggtatcccaatacc 41170 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcc 721 | |||| |||||||||| ||||| |||||||||| | ||||| || ||||| Sbjct: 41171 ttgttcagtctcgttaccggcaagttactttactcgtaccgtaatgcatgatcc 41224 Score = 52.0 bits (26), Expect = 0.003 Identities = 95/118 (80%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| |||||||||| |||||||||| |||| | ||||| Sbjct: 56484 attccctttgtcaatcggtacgttacttgcccgagactcgatcgtcggtatcccaatacc 56543 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | |||| ||| |||||| ||||| |||||||| | | ||||| || ||||||||| Sbjct: 56544 ttgttcagtcttgttaccggcaagtcactttactcataccgtaatgcatgatcccgtg 56601 Score = 50.1 bits (25), Expect = 0.012 Identities = 25/25 (100%) Strand = Plus / Plus Query: 359 acgtccgggatctcatccgggactc 383 ||||||||||||||||||||||||| Sbjct: 62057 acgtccgggatctcatccgggactc 62081 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||| |||||||| |||||||||||||||||| Sbjct: 40853 cctcatgacgtccaggatctcatccgggactc 40884 Score = 46.1 bits (23), Expect = 0.18 Identities = 84/103 (81%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||| ||||| | |||||||||||| ||| | |||||||| || Sbjct: 62130 tcaccgaaccttaagtgtgtagaccctacgggttcgagagacatgcagacatgaccgaga 62189 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccat 533 | |||||||||||||| |||| || ||| |||||| ||||| Sbjct: 62190 cggctctccggtcaataaccaacagcgggatctggatacccat 62232
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 49475 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 49533 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 49534 cggcaagtctctttactcgttccgtaataca 49564 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 53437 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 53496 Query: 555 gaagatctt 563 ||||||||| Sbjct: 53497 gaagatctt 53505 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||| ||| |||| | ||||||| |||||||||||||| Sbjct: 42487 gtatgttacttgcccgagattcgatcatcggtatc-caatacctagttcaatctcgttac 42545 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 42546 cggcaagtctctttactcgttccgtaataca 42576 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 53552 gtatgttacttgcctgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 53610 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 53611 cggcaagtctctttactcgttccgtaataca 53641 Score = 91.7 bits (46), Expect = 3e-15 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 463 gttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttggac 521 |||||||| | ||| | |||||||| || ||| ||||||| ||||| ||||||| |||| Sbjct: 84208 gttcgagaacaatgtagacatgaccgagacacgtctccggccaataaccaatagcgggac 84267 Query: 522 ctggatgcccatattggatcctacttattctacgaagatctt 563 ||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 84268 ctggatgcccatattggctcctacatattctacgaagatctt 84309 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| |||||| |||||||||||||| |||||| |||||||| Sbjct: 42372 tctccggtcaataaccaatagcgggacctagatgcccatattggctcctacatattctac 42431 Query: 555 gaagatctt 563 ||||||||| Sbjct: 42432 gaagatctt 42440 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 49360 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 49419 Query: 555 gaagatctt 563 |||||||| Sbjct: 49420 aaagatctt 49428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 50583 cgggttcgagaactatgtagacatgaccgagacacatctccggtcaataaccaatagcag 50524 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| |||||||| |||||||| Sbjct: 50523 aacctggatgctcatattggctcctacatattctacaaagatctt 50479 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||| ||| Sbjct: 60140 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattttac 60199 Query: 555 gaagatctt 563 ||||||||| Sbjct: 60200 gaagatctt 60208 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 60255 gtatgttacttgcctgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 60313 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||| ||||| |||||||| Sbjct: 60314 cggcaagtctctttacccgttccgtaataca 60344 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 84356 gtatgttacttgcccgagattcgatcgccggtatc-caatacctagttcaatctcgttac 84414 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 84415 tggcaagtctctttactcgttccgtaataca 84445 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||| ||||||||||||||| |||| |||||| | |||||||||||||| Sbjct: 50432 gtatgttacttgcctgagattcgatcgtcggtatcatcataccaagttcaatctcgttac 50373 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| | |||||||||| ||||| Sbjct: 50372 cggcaagtctaattactcgttccgtaat 50345
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 42431 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 42490 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 42491 cctggatgcccatattggctcctacatattctacgaagatctt 42533 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 73919 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 73977 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 73978 cggcaagtctctttactcgttccgtaataca 74008 Score = 101 bits (51), Expect = 4e-18 Identities = 91/103 (88%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 80760 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 80819 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 80820 cctggatgcccatattggctcctacatattctacgaagatctt 80862 Score = 101 bits (51), Expect = 4e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||||||| Sbjct: 80909 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttat 80967 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||||||||||||| Sbjct: 80968 cggcaagtctctttactcgttctgtaataca 80998 Score = 99.6 bits (50), Expect = 1e-17 Identities = 81/90 (90%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 48761 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 48703 Query: 685 caacaagtatctttactcgttctgtaatac 714 | ||||| ||||||||||||| ||||||| Sbjct: 48702 cggcaagtctctttactcgttccgtaatac 48673 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 72390 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 72331 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| |||||| |||||||||| | ||||| || ||||||||| Sbjct: 72330 ttgttcaatctcgttaccgacaagtcactttactcgtaccgtaatgcatgatcccgtg 72273 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 48876 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 48817 Query: 555 gaagatctt 563 ||||||||| Sbjct: 48816 gaagatctt 48808 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 73804 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 73863 Query: 555 gaagatctt 563 ||||||||| Sbjct: 73864 gaagatctt 73872 Score = 93.7 bits (47), Expect = 9e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| || |||||||||||||||||| |||| ||||||||| ||||||||| |||| Sbjct: 1167 gtatgttattttcccgagattcgatcgtcggtatcaccatacctagttcaatctccttac 1108 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| || |||||| |||||||||||| Sbjct: 1107 cggcaagtctccttactcattctgtaataca 1077 Score = 93.7 bits (47), Expect = 9e-16 Identities = 90/103 (87%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 462 ggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttgga 520 ||||||||| | ||| | |||||||| || ||| ||||||||||||| ||||||| ||| Sbjct: 59043 ggttcgagaacaatgtagacatgaccgagacacgtctccggtcaataaccaatagcggga 59102 Query: 521 cctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 59103 cctggatgcccatattggctcccacatattctacgaagatctt 59145 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||| ||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 59192 gtatgttacttgtccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 59250 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| |||||||| Sbjct: 59251 cggcaagtctctttactcgttccgtaataca 59281 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| |||||||| | Sbjct: 1318 cgggttcgagaactatgtagacatgaccgagacacatctccggtcaataaccaatagtgg 1259 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||| |||||||||| Sbjct: 1258 aacctggatgctcatattggttcctacatattcatcgaagatctt 1214 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| |||| | |||||| ||||||||||||||| ||||| Sbjct: 2788 ttgcccgagattcgatcgtcggtatcccgataccttgttcaatctcgttaccggcaagtc 2847 Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 ||||||||||||| |||| ||| |||||||| Sbjct: 2848 tctttactcgttccgtaacacatcatcccgtg 2879 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| ||||||||| |||| Sbjct: 42580 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcattac 42638 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 42639 tggcaagtctctttactcgttccgtaataca 42669 Score = 50.1 bits (25), Expect = 0.012 Identities = 43/49 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||||||||| ||||||| |||||||||||| Sbjct: 72665 cggaccattccggaactcctcgtgacgttcgggatcacatccgggactc 72617 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 49017 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 48974 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 73663 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 73706 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||||| ||||||||||||||||| ||| ||||||| Sbjct: 80653 cctcgtcatgtccgtgatctcatccgggactccgaacaaccttc 80696 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggt 180 |||||||||||||||||||||| Sbjct: 72841 caccagcccactaagggctggt 72820
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 97.6 bits (49), Expect = 6e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctac 554 ||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct: 125651 tctccggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctac 125710 Query: 555 gaagatctt 563 ||||||||| Sbjct: 125711 gaagatctt 125719 Score = 95.6 bits (48), Expect = 2e-16 Identities = 79/88 (89%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 125766 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 125824 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| ||||||||||||| ||||| Sbjct: 125825 cggcaagtctctttactcgttccgtaat 125852 Score = 93.7 bits (47), Expect = 9e-16 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 132609 gtatgttacttgcccgagattcgatcgtcggtatc-caatacctagttcaatctcgttac 132667 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| ||||||||||||| ||||||| Sbjct: 132668 cggcaagtctctttactcgttccataataca 132698 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 499 cggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaag 558 ||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||| Sbjct: 132498 cggtcaataaccaatagcgggacctggatgcccatattggctcctacatattctacgaag 132557 Query: 559 atctt 563 ||||| Sbjct: 132558 atctt 132562
>gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and glutathione S-transferase 1 genes, complete cds Length = 13710 Score = 95.6 bits (48), Expect = 2e-16 Identities = 79/88 (89%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||| ||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 375 gtatgttacttgtccgagattcgatcgtcggtatctc-atacctagttcaatctcgttac 433 Query: 685 caacaagtatctttactcgttctgtaat 712 | ||||| ||||||||||||| ||||| Sbjct: 434 ctgcaagtctctttactcgttccgtaat 461 Score = 81.8 bits (41), Expect = 3e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| |||||| | Sbjct: 224 cgggttcgagaactatgtagacatgaccgagacacgtctccggtcaataaacaatagcgg 283 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 | |||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 284 aatctggatgctcatattggttcctacatattctacgaagatctt 328 Score = 79.8 bits (40), Expect = 1e-11 Identities = 89/104 (85%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 461 gggttcgagagctatgaatacatgaccaaggcactct-ccggtcaatatccaatagttgg 519 |||||||||| ||||| | |||||||| || | | || |||||||||| ||||||| | Sbjct: 8219 gggttcgagaactatgtagacatgaccgagactcacttccggtcaataaccaatagcgga 8160 Query: 520 acctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| |||||||| |||||| ||||||||||||||||| Sbjct: 8159 acctggatgctcatattggttcctacatattctacgaagatctt 8116 Score = 46.1 bits (23), Expect = 0.18 Identities = 32/35 (91%) Strand = Plus / Minus Query: 671 ttcaatctcgttaccaacaagtatctttactcgtt 705 ||||||||||||||| ||||| |||||||||||| Sbjct: 5886 ttcaatctcgttaccgacaagcctctttactcgtt 5852
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||| || ||||| |||||||| |||||||||||||| Sbjct: 22121 gtatgatacttgcccgagattcgatcttcagtatcttcatacctagttcaatctcgttac 22062 Query: 685 caacaagtatctttactcgttctgtaat 712 | |||||| ||||||||||||| ||||| Sbjct: 22061 cgacaagtctctttactcgttccgtaat 22034 Score = 93.7 bits (47), Expect = 9e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||| |||||||||||| |||| | ||||||| |||||||||||||| Sbjct: 116279 gtatgttacttgcccgatattcgatcgtcggtatcccaatacctagttcaatctcgttac 116338 Query: 685 caacaagtatctttactcgttctgtaataca 715 ||||| ||||||||||||| |||||||| Sbjct: 116339 tggcaagtctctttactcgttccgtaataca 116369 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 ||||||||||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 116128 cgggttcgagaactatgcagacatgaccgagacacgtctccggtcaatagccaatagcgg 116187 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 ||||| |||| |||||||| |||||| ||||||||||||||||| Sbjct: 116188 aacctgaatgctcatattggttcctacatattctacgaagatctt 116232 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||| | |||| | ||| |||||||||||||||||| Sbjct: 158029 gtatgttacttgcccgagattcgatcgttggtatcccaatatctatttcaatctcgttac 158088 Query: 685 caacaagtatctttactcgttctgtaataca 715 | |||| ||||||||||||| ||||||| Sbjct: 158089 cggaaagtctctttactcgttccataataca 158119 Score = 69.9 bits (35), Expect = 1e-08 Identities = 112/135 (82%), Gaps = 2/135 (1%) Strand = Plus / Plus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| |||| |||| |||| |||| | ||||||||||| ||||| | | |||||| | Sbjct: 157849 catcacagaactttaagcgtgcggaccctacgggttcgagaactatgtagaaatgaccga 157908 Query: 490 ggcac-tctccggtcaatatccaatagttggacctggatgcccatattggatcctactta 548 | ||| ||||| ||||||| | |||||| | |||||||||| |||||||| |||||| || Sbjct: 157909 gacacgtctcc-gtcaataactaatagtggaacctggatgctcatattggttcctacata 157967 Query: 549 ttctacgaagatctt 563 ||||| ||||||||| Sbjct: 157968 ttctatgaagatctt 157982 Score = 69.9 bits (35), Expect = 1e-08 Identities = 107/131 (81%) Strand = Plus / Minus Query: 595 aatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcg 654 |||| |||||| |||||||||||| | ||| |||| |||||||||| |||||| ||| Sbjct: 160941 aatcccgtatacaattccctttgtcaatcggtacgttacttgcccgagactcgatcatcg 160882 Query: 655 atatctccatacctatttcaatctcgttaccaacaagtatctttactcgttctgtaatac 714 |||| | |||||| ||||||||||||||| ||||| |||||||||| | ||||| | Sbjct: 160881 gtatcccaatacctcgttcaatctcgttaccggcaagtcactttactcgtaccgtaatgc 160822 Query: 715 aagatcccgtg 725 | ||||||||| Sbjct: 160821 atgatcccgtg 160811 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 42840 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 42792 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 49783 cctcgtgacgtccgggatctcatccgggactc 49752 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 494 ctctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattcta 553 |||||||||||||| |||| | | |||||||||| |||||||| ||| || ||||||| Sbjct: 22238 ctctccggtcaataaccaacaacagaacctggatgctcatattggttcccacatattcta 22179 Query: 554 cgaagatctt 563 |||||||||| Sbjct: 22178 cgaagatctt 22169 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| |||||||||| |||||||||| |||| | ||||| Sbjct: 49526 attccctttgtcaatcggtacgttacttgcccgagactcgatcgtcggtatcccaatacc 49467 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | |||| | |||||||| ||||| |||||||||| | ||||| || ||||||||| Sbjct: 49466 ttgttcagtatcgttaccggcaagtcactttactcgtaccgtaatgcatgatcccgtg 49409 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| ||||||||||| ||||| Sbjct: 161229 acttcctatatataaatcttcacctccggaccattccggaactcctcgtgacgttcggga 161170 Query: 369 tctcatccgggactc 383 ||||| ||||||||| Sbjct: 161169 tctcacccgggactc 161155 Score = 48.1 bits (24), Expect = 0.046 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 432 tcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaagg 491 |||| ||||||||| |||||||||| | |||||||| ||| | | | |||||||| || Sbjct: 161106 tcaccgaaccttaagtgtgcagaccctacgggttcgggagacacgtagacatgaccgaga 161047 Query: 492 c-actctccggtcaatatccaatagttggacctggatgcccatattgg 538 | ||||||||||||||| |||| || ||| |||||| ||||| |||| Sbjct: 161046 cgactctccggtcaataaccaacagcgggatctggatacccatgttgg 160999 Score = 46.1 bits (23), Expect = 0.18 Identities = 92/115 (80%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| ||||| |||| |||||||||| |||| | ||||| Sbjct: 42566 attccctttgtcaatcggtacgttacttgcctgagactcgatcgtcggtatcccaatacc 42507 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatccc 722 | |||| |||||||||| ||||| ||||||||| | ||||| || |||||| Sbjct: 42506 ttgttcagtctcgttaccggcaagtcattttactcgtaccgtaatgcatgatccc 42452 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 367 gatctcatccgggactctgaaaaac 391 ||||||||||||||||| ||||||| Sbjct: 22367 gatctcatccgggactccgaaaaac 22343
>emb|CT009588.1| Triticum turgidum Length = 136372 Score = 93.7 bits (47), Expect = 9e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 579 tgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcc 638 ||||||||| ||| | |||| ||||| |||||||||||| | |||||||| ||||| Sbjct: 55923 tgtcaaggacttaatcaatcccgtattcaattccctttgtctatcggtatgttacttgcc 55982 Query: 639 cgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatcttt 698 |||||||||||||||| |||| | |||||| ||||||||||||||| ||||| ||||| Sbjct: 55983 cgagattcgatcgtcggtatc-caataccttgttcaatctcgttaccggcaagtctcttt 56041 Query: 699 actcgttctgtaatacaagatcccgtg 725 |||||||| |||| ||| |||||||| Sbjct: 56042 actcgttccgtaacacatcatcccgtg 56068 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| | Sbjct: 73666 gtatgttacttgcccgagattcgatcgtcggtatccgaatacctcgttcaatctcgttgc 73725 Query: 685 caacaagtatctttactcgttctgtaatacaagatccc 722 | ||||| |||||||||| ||||||| || |||||| Sbjct: 73726 cggcaagtcactttactcgtactgtaatgcatgatccc 73763 Score = 73.8 bits (37), Expect = 8e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||| |||||| ||||| | |||||| ||||||| || ||||||||||| Sbjct: 94148 gtatgttacttgcccaagattcaatcgttggtatctcaatacctagtttaatctcgttac 94089 Query: 685 caacaagtatctttactcgtt 705 | ||||| |||||||||||| Sbjct: 94088 cggcaagtctctttactcgtt 94068 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 55678 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 55726 Score = 65.9 bits (33), Expect = 2e-07 Identities = 88/105 (83%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 |||||| |||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 94299 cgggtttgagaactatgtagacatgaccgagacacgtctccggtcaataaccaatagcgg 94240 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| || |||| ||| || ||||||||||||||||| Sbjct: 94239 aacctggatgctcacattgactcccacatattctacgaagatctt 94195 Score = 63.9 bits (32), Expect = 8e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 |||||||||| |||||||||||||||||||||||||| |||| ||| ||| ||||||| Sbjct: 66351 cattctggaattcctcgtgacgtccgggatctcatccgtgacttcgaacaacattctgtt 66410 Score = 63.9 bits (32), Expect = 8e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||||| |||| ||||||| | Sbjct: 66638 gtatgttacttgcccgagattcgatcgtcggtatcccaatacctcgttcattctcgttgc 66697 Query: 685 caacaagtatctttactcgt 704 | ||||| |||||||||| Sbjct: 66698 cggcaagtcactttactcgt 66717 Score = 52.0 bits (26), Expect = 0.003 Identities = 90/110 (81%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| | Sbjct: 73469 catcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccga 73528 Query: 490 ggca-ctctccggtcaatatccaatagttggacctggatgcccatattgg 538 | || |||||||||||||| |||| || ||| |||||| ||||| |||| Sbjct: 73529 gacagctctccggtcaataaccaacagcgggatctggatacccatgttgg 73578
>emb|CT009585.1| Triticum aestivum Length = 103189 Score = 93.7 bits (47), Expect = 9e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 579 tgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcc 638 ||||||||| ||| | |||| ||||| |||||||||||| | |||||||| ||||| Sbjct: 22227 tgtcaaggacttaatcaatcccgtattcaattccctttgtctatcggtatgttacttgcc 22286 Query: 639 cgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatcttt 698 |||||||||||||||| |||| | |||||| ||||||||||||||| ||||| ||||| Sbjct: 22287 cgagattcgatcgtcggtatc-caataccttgttcaatctcgttaccggcaagtctcttt 22345 Query: 699 actcgttctgtaatacaagatcccgtg 725 |||||||| |||| ||| |||||||| Sbjct: 22346 actcgttccgtaacacatcatcccgtg 22372 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| | Sbjct: 39969 gtatgttacttgcccgagattcgatcgtcggtatccgaatacctcgttcaatctcgttgc 40028 Query: 685 caacaagtatctttactcgttctgtaatacaagatccc 722 | ||||| |||||||||| ||||||| || |||||| Sbjct: 40029 cggcaagtcactttactcgtactgtaatgcatgatccc 40066 Score = 73.8 bits (37), Expect = 8e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||| |||||| ||||| | |||||| ||||||| || ||||||||||| Sbjct: 60456 gtatgttacttgcccaagattcaatcgttggtatctcaatacctagtttaatctcgttac 60397 Query: 685 caacaagtatctttactcgtt 705 | ||||| |||||||||||| Sbjct: 60396 cggcaagtctctttactcgtt 60376 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 21982 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 22030 Score = 65.9 bits (33), Expect = 2e-07 Identities = 88/105 (83%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 460 cgggttcgagagctatgaatacatgaccaaggcac-tctccggtcaatatccaatagttg 518 |||||| |||| ||||| | |||||||| || ||| ||||||||||||| ||||||| | Sbjct: 60607 cgggtttgagaactatgtagacatgaccgagacacgtctccggtcaataaccaatagcgg 60548 Query: 519 gacctggatgcccatattggatcctacttattctacgaagatctt 563 |||||||||| || |||| ||| || ||||||||||||||||| Sbjct: 60547 aacctggatgctcacattgactcccacatattctacgaagatctt 60503 Score = 63.9 bits (32), Expect = 8e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 |||||||||| |||||||||||||||||||||||||| |||| ||| ||| ||||||| Sbjct: 32653 cattctggaattcctcgtgacgtccgggatctcatccgtgacttcgaacaacattctgtt 32712 Score = 63.9 bits (32), Expect = 8e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||||||||||| |||| | |||||| |||| ||||||| | Sbjct: 32940 gtatgttacttgcccgagattcgatcgtcggtatcccaatacctcgttcattctcgttgc 32999 Query: 685 caacaagtatctttactcgt 704 | ||||| |||||||||| Sbjct: 33000 cggcaagtcactttactcgt 33019 Score = 52.0 bits (26), Expect = 0.003 Identities = 90/110 (81%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| | Sbjct: 39772 catcaccgaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccga 39831 Query: 490 ggca-ctctccggtcaatatccaatagttggacctggatgcccatattgg 538 | || |||||||||||||| |||| || ||| |||||| ||||| |||| Sbjct: 39832 gacagctctccggtcaataaccaacagcgggatctggatacccatgttgg 39881
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 93.7 bits (47), Expect = 9e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||| | |||||| ||||||||||||||| Sbjct: 77237 tatgttacttgcccgagattcgatcgtcggtatcccaataccttgttcaatctcgttacc 77296 Query: 686 aacaagtatctttactcgttctgtaatacaagatcccgtggct 728 ||||| ||||||||||| | | ||| || |||||||||||| Sbjct: 77297 ggcaagtctctttactcgtaccgcaatgcatgatcccgtggct 77339 Score = 93.7 bits (47), Expect = 9e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 626 tatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttacc 685 ||||||| ||||||||||||||||||||| |||| | |||||| ||||||||||||||| Sbjct: 84281 tatgttacttgcccgagattcgatcgtcggtatcccaataccttgttcaatctcgttacc 84340 Query: 686 aacaagtatctttactcgttctgtaatacaagatcccgtggct 728 ||||| ||||||||||| | | ||| || |||||||||||| Sbjct: 84341 ggcaagtctctttactcgtaccgcaatgcatgatcccgtggct 84383 Score = 83.8 bits (42), Expect = 8e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| ||||||||||||||||||||| |||| | ||||| Sbjct: 50785 attccctttgtcaatcggtaagttacttgcccgagattcgatcgtcggtatcccaatacc 50726 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 50725 ttgttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 50668 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | ||||| | |||| ||||| |||| ||||||||||||||||| Sbjct: 51086 acttcctatatataattcttcatctccggaccattccggaactcctcgtgacgtccggga 51027 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 51026 tctcatccgggactc 51012 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| |||||||||| ||||||||||||||||| Sbjct: 58133 acttcctatatataattcttcacctccggaccattctggaactcctcgtgacgtccggga 58074 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 58073 tctcatccgggactc 58059 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| ||||||||||||||||| ||| |||| | ||||| Sbjct: 57832 attccctttgtcaatcggtaagttacttgcccgagattcgatcatcggtatcccaatacc 57773 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| ||||||||||| | | ||| || ||||||||| Sbjct: 57772 ttgttcaatctcgttaccggcaagtctctttactcgtaccgcaatgcatgatcccgtg 57715 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 309 acttcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccggga 368 ||||||||||||| | | |||| | |||| ||||| |||| ||||||||||||||||| Sbjct: 83962 acttcctatatataattcttcacctccggaccattccggaactcctcgtgacgtccggga 84021 Query: 369 tctcatccgggactc 383 ||||||||||||||| Sbjct: 84022 tctcatccgggactc 84036 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 76961 cctcgtgacgtccgggatctcatccgggactc 76992
>emb|AJ582533.1|HVU582533 Hordeum vulgare BARE-1 long terminal repeat HvLea-20 mRNA Length = 727 Score = 93.7 bits (47), Expect = 9e-16 Identities = 111/131 (84%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 356 gtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaacatcaataatt 415 |||||||| |||||||||| ||||||| ||| ||| ||| |||||||||| | |||| | Sbjct: 130 gtgacgtcgtggatctcatctgggactccgaacaactttcggttaccaacacctataact 71 Query: 416 caactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttcgagagctat 475 ||||||||| ||||| |||| ||||||||| |||||| ||| |||||||||||| |||| Sbjct: 70 caactatactgaaacgtcaccgaaccttaagtgtgcaagcct-gcgggttcgagaactat 12 Query: 476 gaatacatgac 486 | | ||||||| Sbjct: 11 gtagacatgac 1
>gb|DQ537336.1| Triticum aestivum clones BAC 1289J04; BAC 1001P20, complete sequence Length = 206063 Score = 91.7 bits (46), Expect = 3e-15 Identities = 230/290 (79%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || || Sbjct: 177314 gaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgagatgttc 177255 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| |||| || ||| |||||| ||||| |||| ||| || | ||| |||| Sbjct: 177254 tccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgttccacga 177195 Query: 557 agatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||| ||||| ||| || | ||||||||| | | | |||| |||||| |||||||| Sbjct: 177194 tgatctcatcgtatgaaccacgatgtcaaggactcaatcaatcccgtatacaattccctt 177135 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 |||| ||||| || ||||||||||||||||||||| ||| | |||||| ||||| Sbjct: 177134 tgtctagcggtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaa 177075 Query: 676 tctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 177074 tctcgttaccggcaagtctctttactcgttccgtaacacatcatcccgtg 177025 Score = 85.7 bits (43), Expect = 2e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| ||||||||||||| ||||||| |||| | ||||||| |||||||||||||| Sbjct: 10968 gtatgttacttgcccgagattcaatcgtcggtatc-caatacctagttcaatctcgttac 11026 Query: 685 caacaagtatctttactcgttctgtaataca 715 | ||||| |||||||||||| |||||||| Sbjct: 11027 cggcaagtctctttactcgttacgtaataca 11057 Score = 83.8 bits (42), Expect = 8e-13 Identities = 229/290 (78%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || || Sbjct: 184240 gaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgagatgttc 184181 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| |||| || ||| |||||| ||||| |||| ||| || | ||| |||| Sbjct: 184180 tccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgttccacga 184121 Query: 557 agatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||| |||| ||| || | ||||||||| | | | |||| |||||| |||||||| Sbjct: 184120 tgatctcatcggatgaaccacgatgtcaaggactcaatcaatcccgtatacaattccctt 184061 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 |||| ||||| || ||||||||||||||||||||| ||| | |||||| ||||| Sbjct: 184060 tgtctagcggtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaa 184001 Query: 676 tctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 184000 tctcgttaccggcaagtctctttactcgttccgtaacacatcatcccgtg 183951 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 |||||||| |||||||||||||||| ||| |||| | |||||| |||||||||||||| Sbjct: 67112 gtatgttacttgcccgagattcgattgtccgtatcccaatacctcgttcaatctcgttac 67053 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| |||||||||||| ||||| || ||||||||| Sbjct: 67052 cggcaagtcactttactcgttccgtaatgcatgatcccgtg 67012 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 147182 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 147123 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgt 704 | ||||||||||||||| ||||| |||||||||| Sbjct: 147122 tcgttcaatctcgttaccggcaagtcactttactcgt 147086 Score = 77.8 bits (39), Expect = 5e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||| ||||||||||||| |||| | ||||| Sbjct: 154255 attccctttgtcaatcggtatgttacttgcccgcgattcgatcgtcggtatcccaatacc 154196 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatccc 722 || ||||||||||||||| ||||| ||||||| || | ||||| || |||||| Sbjct: 154195 tagttcaatctcgttaccggcaagtcactttacttgtaccgtaatgcatgatccc 154141 Score = 77.8 bits (39), Expect = 5e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 579 tgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcc 638 ||||||||||| | |||| |||||| |||||||||||| | |||||||| ||||| Sbjct: 162626 tgtcaaggattcaagcaatcccgtatacaattccctttgtcaatcggtatgttacttgcc 162685 Query: 639 cgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatcttt 698 ||||||||||| |||| |||| | |||||| ||||||||||||||| ||||| |||| Sbjct: 162686 cgagattcgattgtcggtatcccaatacctcgttcaatctcgttaccggcaagtcacttt 162745 Query: 699 actcgttctgtaatacaagatcccgtg 725 ||| |||| ||||| || |||| |||| Sbjct: 162746 acttgttccgtaatgcatgatctcgtg 162772 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | ||| |||| ||||||||||||| ||| ||| |||| | ||||| Sbjct: 60269 attccctttgtcaatctgtacgttacttgcccgagattcaatcatcggtatcccaatacc 60210 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||||||||| ||||| || ||||||||| Sbjct: 60209 tcgttcaatctcgttaccggcaagtcactttactcgttccgtaatgcatgatcccgtg 60152 Score = 73.8 bits (37), Expect = 8e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 629 gttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaac 688 |||| ||||||||||||||||||||| |||| |||||| ||||||||||||||| | Sbjct: 155890 gttacttgcccgagattcgatcgtcggtatcctaatacctcattcaatctcgttaccggc 155949 Query: 689 aagtatctttactcgttctgtaatacaagatcccgtg 725 |||| ||||||||||| ||||| || ||||||||| Sbjct: 155950 aagtcaatttactcgttccgtaatgcatgatcccgtg 155986 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 500 ggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacgaaga 559 |||||||| ||||||| | |||||||||| |||||||| |||||| ||||||||||||| Sbjct: 10858 ggtcaataaccaatagcggaacctggatgctcatattggctcctacatattctacgaaga 10917 Query: 560 tctt 563 |||| Sbjct: 10918 tctt 10921 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 177416 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 177368 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 184342 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 184294 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 162397 cctcgtgacgtccgggatctcatccgggactc 162428 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 154530 cggaccattccggaactcctcgtgacgttcgggatctcatccgggactc 154482 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatc 659 |||||||||||| | |||||||| ||||||||||||||||||||| |||| Sbjct: 147258 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatc 147207 Score = 46.1 bits (23), Expect = 0.18 Identities = 38/43 (88%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||||| | ||| ||||||||||||||||||| ||| |||||| Sbjct: 67386 cctcgtcatgtctgggatctcatccgggactccgaacaacctt 67344
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 225953 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 226012 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||| ||||| ||||| || ||||||||| Sbjct: 226013 tcgttcaatctcgttaccggcaagtcactttacacgttccgtaatgcatgatcccgtg 226070 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 629 gttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaac 688 |||| |||||||||||||||||||||||||| |||||| ||||||||||||||| | Sbjct: 137337 gttacttgcccgagattcgatcgtcgatatcctaatacctcattcaatctcgttaccggc 137396 Query: 689 aagtatctttactcgttctgtaatacaagatcccgtg 725 |||| |||||||||||| ||||| || ||||||||| Sbjct: 137397 aagtcactttactcgttccgtaatgcatgatcccgtg 137433 Score = 83.8 bits (42), Expect = 8e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||| ||||||| |||| | ||||| Sbjct: 43291 attccctttgtcaatctgtatgttacttgcccgagattcaatcgtcggtatcccaatacc 43232 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||||||||| ||||| || ||| ||||| Sbjct: 43231 tcgttcaatctcgttaccggcaagtcactttactcgttccgtaatgcatgattccgtg 43174 Score = 83.8 bits (42), Expect = 8e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| |||||||||||||||| ||| |||| | ||||| Sbjct: 50151 attccctttgtcaatctgtatgttacttgcccgagattcgattgtccgtatcccaatacc 50092 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||||||||| ||||| || ||||||||| Sbjct: 50091 tcgttcaatctcgttaccggcaagtcactttactcgttccgtaatgcatgatcccgtg 50034 Score = 83.8 bits (42), Expect = 8e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||| ||||||||||||| |||| | ||||| Sbjct: 135701 attccctttgtcaatcggtatgttacttgcccgcgattcgatcgtcggtatcccaatacc 135642 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 || ||||||||||||||| ||||| ||||||| || | ||||| || ||||||||| Sbjct: 135641 tagttcaatctcgttaccggcaagtcactttacttgtaccgtaatgcatgatcccgtg 135584 Score = 83.8 bits (42), Expect = 8e-13 Identities = 229/290 (78%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaaggcactc 496 ||||||||| |||| ||||| | |||||||| ||| ||| | |||||||| || || Sbjct: 165680 gaaccttaagtgtgtagaccctacgggttcgggagacatgcagacatgaccgagatgttc 165621 Query: 497 tccggtcaatatccaatagttggacctggatgcccatattggatcctacttattctacga 556 ||||||||||| |||| || ||| |||||| ||||| |||| ||| || | ||| |||| Sbjct: 165620 tccggtcaataaccaacagcgggatctggatacccatgttggctcccacatgttccacga 165561 Query: 557 agatcttatcgt-tgagcctctgtgtcaaggatttagttaatctcgtatatcattccctt 615 ||||| |||| ||| || | ||||||||| | | | |||| |||||| |||||||| Sbjct: 165560 tgatctcatcggatgaaccacgatgtcaaggactcaatcaatcccgtatacaattccctt 165501 Query: 616 tgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaa 675 |||| ||||| || ||||||||||||||||||||| ||| | |||||| ||||| Sbjct: 165500 tgtctagcggtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaa 165441 Query: 676 tctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 |||||||||| ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 165440 tctcgttaccggcaagtctctttactcgttccgtaacacatcatcccgtg 165391 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| | |||||||| ||||||||||||||||||||| |||| | ||||| Sbjct: 128705 attccctttgtcaatcggtatgttacttgcccgagattcgatcgtcggtatcccaatacc 128646 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgt 704 | ||||||||||||||| ||||| |||||||||| Sbjct: 128645 tcgttcaatctcgttaccggcaagtcactttactcgt 128609 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||||||| ||| | |||||| |||||||||||||| Sbjct: 158583 gtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaatctcgttac 158524 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 158523 cggcaagtctctttactcgttccgtaacacatcatcccgtg 158483 Score = 77.8 bits (39), Expect = 5e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 579 tgtcaaggatttagttaatctcgtatatcattccctttgtcctttcgtatgttagttgcc 638 ||||||||||| | |||| |||||| |||||||||||| | |||||||| ||||| Sbjct: 144075 tgtcaaggattcaagcaatcccgtatacaattccctttgtcaatcggtatgttacttgcc 144134 Query: 639 cgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatcttt 698 ||||||||||| |||| |||| | |||||| ||||||||||||||| ||||| |||| Sbjct: 144135 cgagattcgattgtcggtatcccaatacctcgttcaatctcgttaccggcaagtcacttt 144194 Query: 699 actcgttctgtaatacaagatcccgtg 725 ||| |||| ||||| || |||| |||| Sbjct: 144195 acttgttccgtaatgcatgatctcgtg 144221 Score = 75.8 bits (38), Expect = 2e-10 Identities = 99/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 608 attccctttgtcctttcgtatgttagttgcccgagattcgatcgtcgatatctccatacc 667 |||||||||||| || |||||||| ||||||||||||||||||| | |||| | ||||| Sbjct: 219115 attccctttgtcaattggtatgttacttgcccgagattcgatcgt-ggtatcccaatacc 219173 Query: 668 tatttcaatctcgttaccaacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||||||||||||| ||||| |||||| ||||| |||| || ||||||||| Sbjct: 219174 tcgttcaatctcgttaccggcaagtcactttacacgttccataatgcatgatcccgtg 219231 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 595 aatctcgtatatcattccctttgtcctttcgtatgttagttgcccgagattcgatcgtcg 654 |||| |||||| |||||||||||| | |||||||| ||||||||||||||||| ||| Sbjct: 232790 aatcacgtatacaattccctttgtcaatcggtatgttacttgcccgagattcgatcatcg 232849 Query: 655 atatctccatacctatttcaatctcgttaccaacaagtatctttactcgttc 706 |||| | |||||| ||||||||||||||| ||||| |||||| ||||| Sbjct: 232850 gtatcccaataccttgttcaatctcgttaccggcaagtcactttacacgttc 232901 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 158875 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 158827 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 165782 cggaccattccggaactcctcgtgacgtccgggatctcatccgggactc 165734 Score = 63.9 bits (32), Expect = 8e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 |||||||||||||||||||||||||||||||| Sbjct: 143846 cctcgtgacgtccgggatctcatccgggactc 143877 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 135976 cggaccattccggaactcctcgtgacgttcgggatctcatccgggactc 135928 Score = 50.1 bits (25), Expect = 0.012 Identities = 43/49 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| |||||||| ||| ||||||||||||||||||| Sbjct: 128980 cggaccattccggaactcctcgtgatgtctgggatctcatccgggactc 128932 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 359 acgtccgggatctcatccgggactctgaaaaaccttc 395 ||||||| ||||||||||||||||| ||| ||||||| Sbjct: 218865 acgtccgagatctcatccgggactccgaacaaccttc 218901 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| | ||| ||||||||||||||||||| ||| ||||||| Sbjct: 50408 cctcgtcatgtctgggatctcatccgggactccgaacaaccttc 50365 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||| ||||||| |||||||||||| |||| ||| ||||||| Sbjct: 232546 cctcgtcacgtccgagatctcatccggaactccgaacaaccttc 232589 Score = 46.1 bits (23), Expect = 0.18 Identities = 68/83 (81%) Strand = Plus / Minus Query: 430 catcacggaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgaccaa 489 |||||| ||||||||| |||| ||||| | |||||||| || | ||| | |||||||| | Sbjct: 43470 catcaccgaaccttaagtgtgtagaccctacgggttcgggaaccatgcagacatgaccga 43411 Query: 490 ggcactctccggtcaatatccaa 512 | || | ||||||||||| |||| Sbjct: 43410 gacattatccggtcaataaccaa 43388
>emb|X57845.1|HVGNIRE H.vulgare gene for nitrate reductase Length = 7299 Score = 87.7 bits (44), Expect = 5e-14 Identities = 94/108 (87%), Gaps = 2/108 (1%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgc-gggttcgagagctatgaatacatgacca-aggcac 494 ||||||||| |||||||||| ||| |||||||||| ||||| | |||||||| || || Sbjct: 108 gaaccttaagtgtgcagaccctgccgggttcgagaactatgtagacatgaccggagtgac 49 Query: 495 tctccggtcaatatccaatagttggacctggatgcccatattggatcc 542 || ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 48 tcctcggtcaatatccaatagcgggacctggatgcccatattggatcc 1 Score = 61.9 bits (31), Expect = 3e-06 Identities = 80/95 (84%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccc-tcgtgacgtccgggatc 370 |||||||||||| | ||| | | |||| ||||||||| |||| |||||||||| | |||| Sbjct: 234 tcctatatatcaatcttcgtttccggaccattctggatacccctcgtgacgtctgtgatc 175 Query: 371 tcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||| ||| ||| ||| || |||||| Sbjct: 174 tcatccgggactccgaacaacattcggtaaccaac 140 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 398 caccagcccaccaagggctggtgcgccaccc 368
>emb|AJ582559.1|HVU582559 Hordeum vulgare BARE-1 long terminal repeat HvCal-17 mRNA Length = 748 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82 Score = 44.1 bits (22), Expect = 0.72 Identities = 43/50 (86%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||||||| ||||||| | ||||||||||||| ||||| | ||||||| Sbjct: 50 gaaccttaagtgtgcaggacctgcgggttcgagaactatgtagacatgac 1
>emb|AJ582557.1|HVU582557 Hordeum vulgare BARE-1 long terminal repeat HvCal-15 mRNA Length = 754 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 326 caccagcccactaagggctggtg 304
>emb|AJ582553.1|HVU582553 Hordeum vulgare BARE-1 long terminal repeat HvCal-11 mRNA Length = 760 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||||||||||||||||||||||| |||||| Sbjct: 331 caccagcccactaagggctggtgcgccaccc 301
>emb|AJ582550.1|HVU582550 Hordeum vulgare BARE-1 long terminal repeat HvCal-7 mRNA Length = 745 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82
>emb|AJ582548.1|HVU582548 Hordeum vulgare BARE-1 long terminal repeat HvCal-5 mRNA Length = 740 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 173 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 114 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 113 catccgggactccgaacaacattcggtaaccaac 80
>emb|AJ582545.1|HVU582545 Hordeum vulgare BARE-1 long terminal repeat HvCal-2 mRNA Length = 751 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| |||||||||||||||||| | ||||| Sbjct: 172 tcctatatatcaatcttcattttcggaccattccggaaaccctcgtgacgtctgtgatct 113 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 112 catccgggactccgaacaacattcggtaaccaac 79
>emb|AJ582544.1|HVU582544 Hordeum vulgare BARE-1 long terminal repeat HvCal-1 mRNA Length = 750 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 323 caccagcccactaagggctggtg 301
>emb|AJ582543.1|HVU582543 Hordeum vulgare BARE-1 long terminal repeat HvLea-32 mRNA Length = 748 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82 Score = 44.1 bits (22), Expect = 0.72 Identities = 43/50 (86%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||||||| ||||||| | ||||||||||||| ||||| | ||||||| Sbjct: 50 gaaccttaagtgtgcaggacctgcgggttcgagaactatgtagacatgac 1
>emb|AJ582542.1|HVU582542 Hordeum vulgare BARE-1 long terminal repeat HvLea-31 mRNA Length = 746 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81 Score = 42.1 bits (21), Expect = 2.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgag 469 ||||||||| |||||||||| |||||||||||| Sbjct: 49 gaaccttaagtgtgcagacc-tgcgggttcgag 18
>emb|AJ582541.1|HVU582541 Hordeum vulgare BARE-1 long terminal repeat HvLea-30 mRNA Length = 746 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| |||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatatttgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81
>emb|AJ582540.1|HVU582540 Hordeum vulgare BARE-1 long terminal repeat HvLea-29 mRNA Length = 757 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 326 caccagcccactaagggctggtg 304 Score = 44.1 bits (22), Expect = 0.72 Identities = 43/50 (86%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||||||| ||||||| | ||||||||||||| ||||| | ||||||| Sbjct: 50 gaaccttaagtgtgcaggacctgcgggttcgagaactatgtagacatgac 1
>emb|AJ582535.1|HVU582535 Hordeum vulgare BARE-1 long terminal repeat HvLea-22 mRNA Length = 748 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaataacattcagtaaccaac 81
>emb|AJ582534.1|HVU582534 Hordeum vulgare BARE-1 long terminal repeat HvLea-21 mRNA Length = 731 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 328 caccagcccaccaagggctggtgcgccaccc 298
>emb|AJ582531.1|HVU582531 Hordeum vulgare BARE-1 long terminal repeat HvLea-15 mRNA Length = 732 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 325 caccagcccaccaagggctggtgcgccaccc 295
>emb|AJ582529.1|HVU582529 Hordeum vulgare BARE-1 long terminal repeat HvLea-9 mRNA Length = 746 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81
>emb|AJ582527.1|HVU582527 Hordeum vulgare BARE-1 long terminal repeat HvLea-1 mRNA Length = 748 Score = 83.8 bits (42), Expect = 8e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaataacattcagtaaccaac 81
>gb|DQ175789.1| Hordeum vulgare clone DsA7 Ds insertion site flanking region genomic sequence Length = 810 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 493 actctccggtcaatatccaatagttggacctggatgcccatattggatcctacttattct 552 ||||||||||||||| |||||||| ||||||||||||||||| ||| |||||| |||||| Sbjct: 801 actctccggtcaataaccaatagtgggacctggatgcccatactggctcctacatattct 742 Query: 553 a 553 | Sbjct: 741 a 741
>emb|AJ582539.1|HVU582539 Hordeum vulgare BARE-1 long terminal repeat HvLea-28 mRNA Length = 747 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||||||||| |||||||||||||||||||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggagcattccggaaaccctcgtgacgtccgtgatct 116 Query: 372 catccggga 380 ||||||||| Sbjct: 115 catccggga 107 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||||||||||||||||||||||| |||||| Sbjct: 319 caccagcccactaagggctggtgcgccaccc 289 Score = 42.1 bits (21), Expect = 2.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 438 aaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 |||||||| ||||||| | ||||||||||||| ||||| | ||||||| Sbjct: 49 aaccttaagtgtgcaggacctgcgggttcgagaactatgtagacatgac 1
>emb|X57168.1|TAWIS21AI T.aestivum Wis-2-1A retrotransposon-like element Length = 1755 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 625 gtatgttagttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttac 684 ||||| || ||||||||||||||||||||| ||| | |||||| |||||||||||||| Sbjct: 669 gtatggtacttgcccgagattcgatcgtcggtataccgataccttgttcaatctcgttac 610 Query: 685 caacaagtatctttactcgttctgtaatacaagatcccgtg 725 | ||||| ||||||||||||| |||| ||| |||||||| Sbjct: 609 cggcaagtctctttactcgttccgtaacacatcatcccgtg 569 Score = 50.1 bits (25), Expect = 0.012 Identities = 43/49 (87%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||| ||||| ||||||| |||||||||||||||||| Sbjct: 960 cggaccattccggaactcctcgggacgtccaggatctcatccgggactc 912
>emb|AJ582532.1|HVU582532 Hordeum vulgare BARE-1 long terminal repeat HvLea-19 mRNA Length = 746 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| |||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatatttgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 114 catccgggactc 103
>emb|AJ582406.1|HVU582406 Hordeum vulgare BARE-1 long terminal repeat Hv-a5 DNA Length = 578 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 114 catccgggactc 103 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| Sbjct: 49 gaaccttaagtgtgcagaccgtgcgggttcgagaactatgtagacatga 1 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 328 caccagcccactaagggctggtg 306
>emb|AJ582551.1|HVU582551 Hordeum vulgare BARE-1 long terminal repeat HvCal-9 mRNA Length = 758 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| ||||| | | |||| ||||| ||||||||||||| ||||| ||||| Sbjct: 175 tcctatatatcaatattcgtttccggaccattccggaaaccctcgtgttgtccgtgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 331 caccagcccactaagggctggtg 309
>emb|AJ582547.1|HVU582547 Hordeum vulgare BARE-1 long terminal repeat HvCal-4 mRNA Length = 746 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 173 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 114 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||||||||| || ||| ||| ||| || |||||| Sbjct: 113 catccgggattccgaacaacattcggtaaccaac 80
>emb|AJ582528.1|HVU582528 Hordeum vulgare BARE-1 long terminal repeat HvLea-4 mRNA Length = 730 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||||| |||||| ||| ||| ||| || |||||| Sbjct: 114 catcctggactccgaacaacattcagtaaccaac 81 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 325 caccagcccaccaagggctggtgcgccaccc 295
>gb|DQ995513.1| Hordeum vulgare clone 604d05_c-69 genomic sequence Length = 20922 Score = 73.8 bits (37), Expect = 8e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| ||| | |||||| ||||||||||||||| | |||| Sbjct: 2540 ttgcccgagattcgatcgtcggtataccaataccttgttcaatctcgttaccgataagtc 2481 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 2480 tctttactcgttc 2468 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaac 391 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2823 cctcgtgatgtccgggatctcatccgggactctgaaaaac 2784
>emb|AJ582549.1|HVU582549 Hordeum vulgare BARE-1 long terminal repeat HvCal-6 mRNA Length = 751 Score = 73.8 bits (37), Expect = 8e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 |||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 151 cggaccattccggaaaccctcgtgacgtccgtgatctcatccgggactc 103 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 ccagcccactaagggctggtgc 182 |||||||||||||||||||||| Sbjct: 323 ccagcccactaagggctggtgc 302
>emb|AJ223973.1|ASAJ3973 Avena strigosa repetitive DNA, segment of LTR sequence Length = 646 Score = 73.8 bits (37), Expect = 8e-10 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| || | |||||||| |||||||||||| ||||||||| Sbjct: 285 ttgcccgagattcgatcgtcggtaccgtcatacctagttcaatctcgttgacaacaagta 226 Query: 694 tctttactcgttc 706 |||||||||||| Sbjct: 225 -ctttactcgttc 214
>emb|AJ582538.1|HVU582538 Hordeum vulgare BARE-1 long terminal repeat HvLea-26 mRNA Length = 721 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||||||||| ||||| Sbjct: 173 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgacgtccgtgatct 114 Query: 372 catccgggactc 383 ||| |||||||| Sbjct: 113 cattcgggactc 102
>emb|AJ582530.1|HVU582530 Hordeum vulgare BARE-1 long terminal repeat HvLea-12 mRNA Length = 707 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| ||||| |||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaatcctcgtgacgtccgtgatct 115 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 114 catccgggactc 103 Score = 52.0 bits (26), Expect = 0.003 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||||||| ||||||||||| |||||||||||| ||||| | ||||||| Sbjct: 49 gaaccttaagtgtgcagacct-gcgggttcgagaactatgtagacatgac 1
>emb|AJ582408.1|HVU582408 Hordeum vulgare BARE-1 long terminal repeat Hv-b2 DNA Length = 578 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| |||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcatttccggacaattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactc 383 |||||| ||||| Sbjct: 114 catccgagactc 103 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| Sbjct: 49 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatga 1 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 330 caccagcccactaagggctggtgcgccaccct 299
>emb|AJ582407.1|HVU582407 Hordeum vulgare BARE-1 long terminal repeat Hv-b1 DNA Length = 578 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| |||| |||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcatttccggacaattccggaaaccctcgtgacgtccgtgatct 115 Query: 372 catccgggactc 383 |||||| ||||| Sbjct: 114 catccgagactc 103 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| Sbjct: 49 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatga 1 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccct 190 |||||||||||||||||||||||| ||||||| Sbjct: 330 caccagcccactaagggctggtgcgccaccct 299
>emb|AJ582556.1|HVU582556 Hordeum vulgare BARE-1 long terminal repeat HvCal-14 mRNA Length = 751 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 313 cctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatctc 372 ||||||||||| | ||| ||| |||| ||||| ||||| |||||||||||||| |||| | Sbjct: 172 cctatatatcaatcttcgtatccggaccattccggaaatcctcgtgacgtccgtgatccc 113 Query: 373 atccgggactc 383 ||||||||||| Sbjct: 112 atccgggactc 102
>dbj|AB061327.1| Avena sativa LTR-retrotransposon OARE-1 gag-pol pseudogene for polyprotein Length = 8665 Score = 69.9 bits (35), Expect = 1e-08 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| || | |||||||| |||||||||||| || |||||| Sbjct: 660 ttgcccgagattcgatcgtcggtaccgtcatacctagttcaatctcgttcacagcaagta 601 Query: 694 tctttactcgttctgtaat 712 |||||||||||| ||||| Sbjct: 600 -ctttactcgttccgtaat 583 Score = 69.9 bits (35), Expect = 1e-08 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| || | |||||||| |||||||||||| || |||||| Sbjct: 7609 ttgcccgagattcgatcgtcggtaccgtcatacctagttcaatctcgttcacagcaagta 7550 Query: 694 tctttactcgttctgtaat 712 |||||||||||| ||||| Sbjct: 7549 -ctttactcgttccgtaat 7532
>emb|AJ582554.1|HVU582554 Hordeum vulgare BARE-1 long terminal repeat HvCal-12 mRNA Length = 754 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgtt 399 ||||| ||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || Sbjct: 146 cattccggaaaccctcgtgacgtccttgatctcatccgggactccgaacaacattcggta 87 Query: 400 accaac 405 |||||| Sbjct: 86 accaac 81 Score = 52.0 bits (26), Expect = 0.003 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||||||| ||||||||||| |||||||||||| ||||| | ||||||| Sbjct: 49 gaaccttaagtgtgcagacct-gcgggttcgagaactatgtagacatgac 1 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 323 caccagcccactaagggctggtg 301
>emb|AJ582546.1|HVU582546 Hordeum vulgare BARE-1 long terminal repeat HvCal-3 mRNA Length = 756 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||| ||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggaccattccggaaaccctcttgacgtccgtgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 ||| |||||||| ||| ||| ||| || |||||| Sbjct: 114 catgcgggactccgaacaacattcggtaaccaac 81 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||||||||||||||||||||||| |||||| Sbjct: 327 caccagcccactaagggctggtgcgccaccc 297
>emb|AJ582536.1|HVU582536 Hordeum vulgare BARE-1 long terminal repeat HvLea-24 mRNA Length = 748 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| ||||| |||||||||||||| |||| ||||| Sbjct: 175 tcctatatatcaatcttcgtttccggaccattccggaaaccctcgtgatgtccttgatct 116 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 115 catccgggactccgaacaacattcggtaaccaac 82
>emb|AJ582404.1|HVU582404 Hordeum vulgare BARE-1 long terminal repeat Hv-a3 DNA Length = 471 Score = 67.9 bits (34), Expect = 5e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||| | | |||| |||| ||||||||||||||||||| ||||| Sbjct: 174 tcctatatatcaatcttcgtttccggactattccggaaaccctcgtgacgtccatgatct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||| ||| ||| ||| || |||||| Sbjct: 114 catccgggactccgaacaacattcggtaaccaac 81 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 49 gaaccttaagtgtgcagaccctgcgggttcgagagctatgtagacatga 1 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtg 181 ||||||||||||||||||||||| Sbjct: 324 caccagcccactaagggctggtg 302
>gb|DQ175948.1| Hordeum vulgare subsp. vulgare clone 33-56A flanking T-DNA insertion sequence Length = 690 Score = 63.9 bits (32), Expect = 8e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttc 395 |||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 516 cctcgtgatgtccgggatctcatccgggactccgaacaaccttc 559
>emb|AJ582537.1|HVU582537 Hordeum vulgare BARE-1 long terminal repeat HvLea-25 mRNA Length = 745 Score = 63.9 bits (32), Expect = 8e-07 Identities = 63/72 (87%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| |||| | | |||| ||||| ||||||| |||||||||||| ||||| Sbjct: 173 tcctatatatcaatatttgtttccggaccattccggaaacc-tcgtgacgtccgtgatct 115 Query: 372 catccgggactc 383 |||||||||||| Sbjct: 114 catccgggactc 103
>emb|AJ582558.1|HVU582558 Hordeum vulgare BARE-1 long terminal repeat HvCal-16 mRNA Length = 744 Score = 61.9 bits (31), Expect = 3e-06 Identities = 107/130 (82%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 348 aaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttacca-aca 406 |||||||||||||||| | |||| ||||| ||||||||| || ||| || |||| ||| Sbjct: 138 aaaccctcgtgacgtctgtcatcttatccgagactctgaacaaaattcggtaaccacaca 79 Query: 407 tcaataattcaactataccgaaacatcacggaaccttaactgtgcagaccttgcgggttc 466 | |||| |||||||||| ||||||| | ||||||||| ||||||| | ||||||||| Sbjct: 78 t--ataactcaactatactaaaacatcgccgaaccttaagtgtgcaggacctgcgggttc 21 Query: 467 gagagctatg 476 |||| ||||| Sbjct: 20 gagaactatg 11 Score = 48.1 bits (24), Expect = 0.046 Identities = 39/44 (88%) Strand = Plus / Minus Query: 222 cccctcccggtggaactctggatcccattcgtcactcccggtac 265 |||||||||||| | || ||| ||||||||||||||||||||| Sbjct: 263 cccctcccggtgaacttccggaacccattcgtcactcccggtac 220 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 |||| ||||||||||||||||||| |||||| Sbjct: 327 caccggcccactaagggctggtgcgccaccc 297
>emb|AJ582552.1|HVU582552 Hordeum vulgare BARE-1 long terminal repeat HvCal-10 mRNA Length = 741 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 312 tcctatatatcagtattcatatacggagcattctggaaaccctcgtgacgtccgggatct 371 |||||||||||| | ||||| | |||| ||||| |||||||||| |||| || | ||| Sbjct: 174 tcctatatatcaatcttcatttccggaccattccggaaaccctcatgaccaccatggtct 115 Query: 372 catccgggactctgaaaaaccttctgttaccaac 405 |||||||||||||||| ||| ||| || |||||| Sbjct: 114 catccgggactctgaacaacattcggtaaccaac 81
>emb|AJ582405.1|HVU582405 Hordeum vulgare BARE-1 long terminal repeat Hv-a4 DNA Length = 581 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 348 aaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 |||||||||||||||||| |||||||||||||| || ||| ||| ||| || |||||| Sbjct: 136 aaaccctcgtgacgtccgtgatctcatccgggattccgaacaacattcggtaaccaac 79 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cccattcgtcactcccggtac 265 ||||||||||||||||||||| Sbjct: 237 cccattcgtcactcccggtac 217
>emb|AJ582402.1|HVU582402 Hordeum vulgare BARE-1 long terminal repeat Hv-a1 DNA Length = 467 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 348 aaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||||| || ||||||||||||||||| ||| ||| ||| || |||||| Sbjct: 137 aaaccctcgtgacgttcgtgatctcatccgggactccgaacaacattcggtaaccaac 80 Score = 50.1 bits (25), Expect = 0.012 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| Sbjct: 48 gaaccttaagtgtgcagacc-tgcgggttcgagaactatgtagacatga 1
>gb|AF450249.1| Spartina anglica WIS-2-1A Ty1-copia-like retrotransposon 5' LTR sequence Length = 986 Score = 58.0 bits (29), Expect = 5e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 644 ttcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagtatctttactcg 703 ||||||||||| |||| | |||||| | ||||||||||||| ||||| |||||||| | Sbjct: 744 ttcgatcgtcggtatccctataccttgtccaatctcgttaccggcaagtctctttacttg 803 Query: 704 ttctgtaatacaagatcccgtggct 728 ||| |||| ||| ||||||||||| Sbjct: 804 ttccgtaacacatcatcccgtggct 828 Score = 50.1 bits (25), Expect = 0.012 Identities = 52/61 (85%) Strand = Plus / Plus Query: 335 cggagcattctggaaaccctcgtgacgtccgggatctcatccgggactctgaaaaacctt 394 |||| |||||||||| |||||||| ||| | | ||||||||||||||| ||| |||||| Sbjct: 429 cggaccattctggaactcctcgtgatgtctgagttctcatccgggactccgaacaacctt 488 Query: 395 c 395 | Sbjct: 489 c 489
>emb|AJ582411.1|HVU582411 Hordeum vulgare BARE-1 long terminal repeat Hv-b5 DNA Length = 571 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| Sbjct: 49 gaaccttaagtgtgcagaccctgcgggttcgagaactatgtagacatga 1 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 340 cattctggaaaccctcgtgacgtccgggatctcatccgggactc 383 ||||| |||||||||||||||||||| |||||||| | |||||| Sbjct: 146 cattccggaaaccctcgtgacgtccgtgatctcatgcaggactc 103
>emb|AJ582410.1|HVU582410 Hordeum vulgare BARE-1 long terminal repeat Hv-b4 DNA Length = 571 Score = 58.0 bits (29), Expect = 5e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 222 cccctcccggtggaactctggatcccattcgtcactcccggtactttacctgcaatgtcc 281 |||||||||||| | || ||| ||||||||||| ||||||||| ||||| | |||| || Sbjct: 262 cccctcccggtgaagatccggaacccattcgtcattcccggtacattaccggtaatgccc 203 Query: 282 gaaaacctt 290 ||||||||| Sbjct: 202 gaaaacctt 194 Score = 50.1 bits (25), Expect = 0.012 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatga 485 ||||||||| |||||||||| ||||||||||||| ||||| | |||||| Sbjct: 48 gaaccttaagtgtgcagacc-tgcgggttcgagaactatgtagacatga 1
>gb|AY641410.1| Hordeum vulgare subsp. vulgare retrotransposons Sandra3 and Sandra4, complete sequence Length = 7056 Score = 58.0 bits (29), Expect = 5e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 634 ttgcccgagattcgatcgtcgatatctccatacctatttcaatctcgttaccaacaagta 693 ||||||||||||||||||||| ||| | |||||| |||||||||||||| |||| Sbjct: 4823 ttgcccgagattcgatcgtcggtatacctataccttgttcaatctcgttactggtaagtc 4882 Query: 694 tctttactcgttc 706 ||||||||||||| Sbjct: 4883 tctttactcgttc 4895 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggactc 383 ||||||||||||| |||||||||||||||||| Sbjct: 4537 cctcgtgacgtcctggatctcatccgggactc 4568
>gb|DQ175937.1| Hordeum vulgare subsp. vulgare clone 33-34A-LB flanking T-DNA insertion sequence Length = 269 Score = 54.0 bits (27), Expect = 7e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 670 tttcaatctcgtt-accaacaagtatctttactcgttctgtaatacaagatcccg 723 ||||||||||||| ||| ||||| |||||||||||| |||||||||||||||| Sbjct: 69 tttcaatctcgtttaccggcaagtttctttactcgtttcgtaatacaagatcccg 123
>emb|AJ582555.1|HVU582555 Hordeum vulgare BARE-1 long terminal repeat HvCal-13 mRNA Length = 725 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||| |||| ||||||||||||| ||| ||| ||| || |||||| Sbjct: 133 cctcgtgacgtcctggatgtcatccgggactccgaacaacattcggtaaccaac 80 Score = 46.1 bits (23), Expect = 0.18 Identities = 44/50 (88%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 437 gaaccttaactgtgcagaccttgcgggttcgagagctatgaatacatgac 486 ||||||||| ||||||| | ||||||||||||||||||| | ||||||| Sbjct: 48 gaaccttaagtgtgcagcc--tgcgggttcgagagctatgcagacatgac 1
>gb|DQ175812.1| Hordeum vulgare clone DsB2 Ds insertion site flanking region genomic sequence Length = 842 Score = 48.1 bits (24), Expect = 0.046 Identities = 33/36 (91%) Strand = Plus / Minus Query: 518 ggacctggatgcccatattggatcctacttattcta 553 ||||||||||||||||| ||| |||||| ||||||| Sbjct: 836 ggacctggatgcccatactggctcctacatattcta 801
>emb|X65875.1|HVITR1 H.vulgare Itr1 gene Length = 5463 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 694 tctttactcgttctgtaatacaagatcccgtg 725 ||||| ||||||| |||||||||||||||||| Sbjct: 649 tcttttctcgttcggtaatacaagatcccgtg 618
>gb|DQ175993.1| Hordeum vulgare subsp. vulgare clone 65-23A-RB flanking T-DNA insertion sequence Length = 634 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Minus Query: 159 caccagcccactaagggctggtgcaccaccc 189 ||||||||||| |||||||||||| |||||| Sbjct: 87 caccagcccaccaagggctggtgcgccaccc 57
>gb|M58754.1|BLYACL3 Hordeum vulgare acyl carrier protein III (Acl3) gene, complete cds Length = 4830 Score = 46.1 bits (23), Expect = 0.18 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 cctcgtgacgtccgggatctcatccgggact 382 |||||||| |||| ||||||||||||||||| Sbjct: 451 cctcgtgatgtccaggatctcatccgggact 481
>emb|AJ582560.1|HVU582560 Hordeum vulgare BARE-1 long terminal repeat HvCal-19 mRNA Length = 729 Score = 44.1 bits (22), Expect = 0.72 Identities = 28/30 (93%) Strand = Plus / Minus Query: 352 cctcgtgacgtccgggatctcatccgggac 381 ||||||||||||| ||||||||||| |||| Sbjct: 134 cctcgtgacgtcctggatctcatccaggac 105
>emb|AJ582409.1|HVU582409 Hordeum vulgare BARE-1 long terminal repeat Hv-b3 DNA Length = 570 Score = 44.1 bits (22), Expect = 0.72 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 348 aaaccctcgtgacgtccgggatctcatccgggactctgaaaaaccttctgttaccaac 405 ||||||||||||||| || ||||||||| ||||||| ||| ||| ||| || |||||| Sbjct: 137 aaaccctcgtgacgt-cgtgatctcatctgggactccgaacaacattcggtaaccaac 81
>gb|AY818394.1| Ailuropoda melanoleuca immunoglobulin delta heavy chain gene, partial cds Length = 10428 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 caccagcccactaagggctgg 179 ||||||||||||||||||||| Sbjct: 9153 caccagcccactaagggctgg 9173
>gb|AC105062.13| Mus musculus chromosome 7, clone RP24-528E17, complete sequence Length = 162502 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 tcctttccttttatccttctt 130 ||||||||||||||||||||| Sbjct: 84200 tcctttccttttatccttctt 84220
>gb|AF348330.1|AF348330 Wolbachia sp. wRi 4-hydroxybenzoate octaprenyltransferase (ubiA), ribosomal binding factor A (rbfA), translation initiation factor IF-2 (infB), N utilization substance protein A (nusA), and multidrug resistance protein D (acrD) genes, complete cds Length = 9235 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tgaaaaaccttctgttaccaa 404 ||||||||||||||||||||| Sbjct: 4099 tgaaaaaccttctgttaccaa 4119
>gb|AC158314.5| Mus musculus chromosome 7, clone RP23-145E21, complete sequence Length = 185668 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 tcctttccttttatccttctt 130 ||||||||||||||||||||| Sbjct: 33026 tcctttccttttatccttctt 33046
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tgaaaaaccttctgttaccaa 404 ||||||||||||||||||||| Sbjct: 1261604 tgaaaaaccttctgttaccaa 1261624 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 117,796,466 Number of extensions: 6030037 Number of successful extensions: 111855 Number of sequences better than 10.0: 145 Number of HSP's gapped: 111378 Number of HSP's successfully gapped: 933 Length of query: 760 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 738 Effective length of database: 18,508,616,841 Effective search space: 13659359228658 Effective search space used: 13659359228658 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
