ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf1f01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121343:Os07g0619800 | 35 | 0.12 | 2 | AK106335:Os01g0687600 | 33 | 0.60 | 3 | AK066891:Os05g0429600 | 32 | 1.7 | 4 | AK103326:Os01g0111900 | 31 | 3.0 | 5 | Os12g0638400:Os12g0638400 | 30 | 3.9 | 6 | AK108076:Os08g0465300 | 30 | 3.9 | 7 | AK107263:Os04g0309500 | 30 | 3.9 | 8 | AK100584:Os02g0681100 | 30 | 3.9 | 9 | AK059946:Os07g0179200 | 30 | 3.9 | 10 | AK107125:Os12g0168100 | 30 | 5.0 | 11 | AK120628:Os10g0539700 | 30 | 5.1 | 12 | AK109030:Os11g0160400 | 30 | 6.6 | 13 | AK065657:Os01g0228800 | 30 | 6.6 | 14 | AB052944:Os06g0157700 | 30 | 6.6 | 15 | AB052943:Os06g0157700 | 30 | 6.6 | 16 | Os02g0641300:Os02g0641300 | 29 | 8.6 | 17 | AK101821: | 29 | 8.6 | 18 | AK100026:Os09g0534000 | 29 | 8.6 | 19 | AK071124:Os06g0212500 | 29 | 8.6 | 20 | AK070420:Os01g0959000 | 29 | 8.6 |
|---|
>AK121343:Os07g0619800 | Length = 546 Score = 35.4 bits (80), Expect = 0.12 Identities = 41/136 (30%), Positives = 50/136 (36%), Gaps = 12/136 (8%) Frame = +3 Query: 876 ATCRTRRPCGSRAPTRR--RTMTSRYSKASTFRARPGAKSRTPSSLTLSRGAPTRPWRSK 1049 A+ R+RRP P R R SR + S+ RP RT SS RG P R Sbjct: 13 ASGRSRRPRRRGGPARPPPRGRRSRGRRPSSGSPRPARALRTTSSRPPPRGGPPPRPRPP 72 Query: 1050 RH*SRS**TPSARIR-----SRMWRSA*RPCGTR-----IRWTRRSRPCRSSG*NSRRPF 1199 R S R R R R A P G R W R+ + G S R Sbjct: 73 RPRGGCCGCRSRRRRPPSTSGRRSRGATGPRGRRSPRRAATWKGRAAAGSTRGSGSTRGS 132 Query: 1200 RKKMVWRTTWASLTTS 1247 R+ W T W T++ Sbjct: 133 RRSTTWGTRWGEATSA 148
>AK106335:Os01g0687600 | Length = 349 Score = 33.1 bits (74), Expect = 0.60 Identities = 31/78 (39%), Positives = 35/78 (44%) Frame = +3 Query: 969 ARPGAKSRTPSSLTLSRGAPTRPWRSKRH*SRS**TPSARIRSRMWRSA*RPCGTRIRWT 1148 +R G SR+PS R + P RS+RH SRS R R R RS R R Sbjct: 81 SRTGRHSRSPSPSRRHRTRSSSPSRSRRHRSRS------RERRRRSRSREREREDRRASR 134 Query: 1149 RRSRPCRSSG*NSRRPFR 1202 RRSR S SRR R Sbjct: 135 RRSRSRSRSRSPSRRSGR 152
>AK066891:Os05g0429600 | Length = 129 Score = 31.6 bits (70), Expect = 1.7 Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Frame = +3 Query: 903 GSRAPTRRRTMTSRYSKASTFRARPGAKSRTPSSLTLSRGAPTRPWRSKRH*SRS**TPS 1082 G RA T T + GA++R P T RPWR R +P Sbjct: 6 GGRAATPASARTRPRRRRRPPATAAGARTRAPCRRT------RRPWRPSRVPPAPAPSPP 59 Query: 1083 A------RIRSRMWRSA*RPCGTRIRWTRRSRPCRSSG*NSRR 1193 R R+ R A P TR WTRRSRP R RR Sbjct: 60 RTAGRRRRTRTARARRAAAPA-TRPSWTRRSRPPRCRRRRRRR 101
>AK103326:Os01g0111900 | Length = 212 Score = 30.8 bits (68), Expect = 3.0 Identities = 30/85 (35%), Positives = 38/85 (44%) Frame = +3 Query: 891 RRPCGSRAPTRRRTMTSRYSKASTFRARPGAKSRTPSSLTLSRGAPTRPWRSKRH*SRS* 1070 RR + A TRRR T R A+T R R G++ RT + RG TR R+ Sbjct: 114 RRRTEAEATTRRRATTRR--PATTRRRRGGSRRRTCRPTSRRRGRSTR---------RTP 162 Query: 1071 *TPSARIRSRMWRSA*RPCGTRIRW 1145 + R R+ R A R C R RW Sbjct: 163 ASGPTRRRAAPRRGA-RWCSRRRRW 186
>Os12g0638400:Os12g0638400 | Length = 826 Score = 30.4 bits (67), Expect = 3.9 Identities = 22/79 (27%), Positives = 31/79 (39%) Frame = +3 Query: 9 ETQTPCRVSAVSLVKTKGVSPPPLLFHSDCSGAKYKKRRQERSASGIISPLFPNTSVPTI 188 ET T + S L+ P H D + K ++ER S +SP + N + Sbjct: 200 ETPTQKKRSVAELMDNDDDKATP--HHQDSATTISKSNKRERKKSKYLSPPYTNLGGIAL 257 Query: 189 CWPAPGSPNSFPVAPRKDD 245 A SP P A +DD Sbjct: 258 VQKASDSPKPSPPAAAEDD 276
>AK108076:Os08g0465300 | Length = 223 Score = 30.4 bits (67), Expect = 3.9 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%) Frame = -2 Query: 1121 SSGGTPH--PRAYSCAWCSSRPA 1059 +S TPH PR +SC+WC + PA Sbjct: 178 ASPSTPHSSPRRWSCSWCCASPA 200
>AK107263:Os04g0309500 | Length = 209 Score = 30.4 bits (67), Expect = 3.9 Identities = 32/113 (28%), Positives = 42/113 (37%) Frame = +3 Query: 897 PCGSRAPTRRRTMTSRYSKASTFRARPGAKSRTPSSLTLSRGAPTRPWRSKRH*SRS**T 1076 P G R P+ R S + RP SSL G RP + + Sbjct: 87 PGGGRPPSPDRARDSPAEPVARRWRRPS------SSLAAGAGRRRRPSLEEAGGT----P 136 Query: 1077 PSARIRSRMWRSA*RPCGTRIRWTRRSRPCRSSG*NSRRPFRKKMVWRTTWAS 1235 P A + ++ RP T RRS CR+ +S P RKK WR W + Sbjct: 137 PPAARHTEEAQAGDRPPPT---CNRRSTACRTRRPSSSLPIRKKWRWRGKWVN 186
>AK100584:Os02g0681100 | Length = 516 Score = 30.4 bits (67), Expect = 3.9 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 10/77 (12%) Frame = +3 Query: 72 PPLLFHSDCSGAKYKKRRQERSA---SGIISPLFPNTSVPTICWPAPGS------PNSFP 224 PP+ S+ SG YK RR RSA S I+S F + + W G P++ Sbjct: 144 PPIKISSNTSGFPYKNRRGHRSAIRISRIVSETF-RLGLSGVRWYVMGDDDTVFLPDNLV 202 Query: 225 VAPRKDDH-QPCVCGSP 272 +K DH QP G P Sbjct: 203 AVLQKLDHRQPYYIGYP 219
>AK059946:Os07g0179200 | Length = 201 Score = 30.4 bits (67), Expect = 3.9 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +3 Query: 897 PCGSRAPTRRRTMTSRYSKASTFRARPGAKSRTPSSLTL-SRGAPTRPWRSKRH*SRS 1067 P G+R+P RR + R S S + R ++SR+ S L RG RP S RH SRS Sbjct: 61 PYGARSPVRRYRGSPRASSPSRYPRRDRSRSRSRSPLRYRERGGYRRP--SPRH-SRS 115
>AK107125:Os12g0168100 | Length = 341 Score = 30.0 bits (66), Expect = 5.0 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 5/53 (9%) Frame = +3 Query: 1107 RSA*RPCGTRIRWTRR-----SRPCRSSG*NSRRPFRKKMVWRTTWASLTTSR 1250 RS P TR RW RR R C G RR R WR +W + R Sbjct: 21 RSTPTPAATRARWRRRRRRCWRRRCCRGGGRRRRWRRWCRRWRVSWPAAAARR 73
>AK120628:Os10g0539700 | Length = 832 Score = 30.0 bits (66), Expect = 5.1 Identities = 26/103 (25%), Positives = 41/103 (39%) Frame = -1 Query: 741 LAVVESARGCAPRIKNGRTIFLTPSPHTEHLGKSLKSFSTSSWRNPSSALTRRRTTRFER 562 +A+V S G PRI +G + +S + S SSWR P+ T + R+ Sbjct: 33 VAIVRSGGGDGPRIVDGG--------RDDRRARSSRRLSLSSWRRPAGGETSVESRRY-- 82 Query: 561 SHALRGNGYLRSASAKDAHAGQAAPPRRLSSVEIRSWRSVRNC 433 G+ +A+A+ +AA V + S R C Sbjct: 83 -------GFTAAAAAEVGGKTRAAAIWEWKPVRVLSRIGKRRC 118
>AK109030:Os11g0160400 | Length = 316 Score = 29.6 bits (65), Expect = 6.6 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +3 Query: 156 PLFPNTSVPTICWPAPGSPNSFPVAPRKDDHQP 254 P FP+ PT WP PG N +P P H P Sbjct: 226 PPFPSHPPPTPAWPQPG--NKWPPLPPFPSHPP 256
>AK065657:Os01g0228800 | Length = 696 Score = 29.6 bits (65), Expect = 6.6 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Frame = +3 Query: 876 ATCRTRRPCGSRAP--TRRRTMTSRYSKAST 962 +TCRTR+P +AP +R + ++SR K ST Sbjct: 405 STCRTRKPVARKAPSNSREKAVSSRSRKNST 435
>AB052944:Os06g0157700 | Length = 179 Score = 29.6 bits (65), Expect = 6.6 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 334 DPRGAQPSDPHALQYLHVCPADAPG 408 DP PSDP+ +YLH D PG Sbjct: 73 DPDAPSPSDPNLREYLHWLVTDIPG 97
>AB052943:Os06g0157700 | Length = 179 Score = 29.6 bits (65), Expect = 6.6 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 334 DPRGAQPSDPHALQYLHVCPADAPG 408 DP PSDP+ +YLH D PG Sbjct: 73 DPDAPSPSDPNLREYLHWLVTDIPG 97
>Os02g0641300:Os02g0641300 | Length = 317 Score = 29.3 bits (64), Expect = 8.6 Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 4/105 (3%) Frame = +2 Query: 686 VRPFLIRGA-QPRADSTTAKIHHSLSLQSYAIIKHHQRHVDMSNXXXXXKMMLTNHKKAP 862 +RP L G P + T +H +L + I +H D + KK Sbjct: 62 LRPGLKHGVFSPEEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYL----KKRV 117 Query: 863 TSTGSDVSYA--TTMRITGADPA-SDDDESLQQSVDFPSSTRSEE 988 S G S TT + PA SDD SLQQ P+++ S E Sbjct: 118 ESGGGKTSQGPPTTPASAASSPADSDDSHSLQQKPHEPANSDSSE 162
>AK101821: | Length = 310 Score = 29.3 bits (64), Expect = 8.6 Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 18/101 (17%) Frame = +3 Query: 891 RRPCGSRAPTRRRTMTSRYSKASTFRARPGAKSRT------------------PSSLTLS 1016 RRP + TRRR R SKA+ R + S PSSL+ S Sbjct: 189 RRPGNPKPATRRRRCPDRVSKAAVRPLRRSSSSSRCLCATSCSAPAAPTNASGPSSLSTS 248 Query: 1017 RGAPTRPWRSKRH*SRS**TPSARIRSRMWRSA*RPCGTRI 1139 AP R S P++R SR RSA C T + Sbjct: 249 HAAPPRTASS----------PTSRSTSRRPRSA---CSTGV 276
>AK100026:Os09g0534000 | Length = 457 Score = 29.3 bits (64), Expect = 8.6 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Frame = +3 Query: 915 PTRRRTMTSRYSKASTFRA-----RPGAKSRTPSSLTLSRGAPTRPWRSKRH 1055 P TS S S F A P + TPSS TL R P R W K+H Sbjct: 6 PAAAAASTSLDSDDSFFDALDSLPSPPSPPHTPSSSTLRRRRPRRGWSLKQH 57
>AK071124:Os06g0212500 | Length = 493 Score = 29.3 bits (64), Expect = 8.6 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = -3 Query: 1231 AHVVLHTIFFLKGL--REFQPELRHGRERLVQRIRVPHGRQAERHILERILALGVHHDLL 1058 AH +LH + GL R + LR ERL ++RV G +HIL++I A LL Sbjct: 260 AHYLLHPTNKVWGLITRFYDSYLRDSDERLGIQVRVFDGDTPFKHILDQITACTSQERLL 319 Query: 1057 QCLFER 1040 + E+ Sbjct: 320 PEVVEQ 325
>AK070420:Os01g0959000 | Length = 432 Score = 29.3 bits (64), Expect = 8.6 Identities = 24/61 (39%), Positives = 30/61 (49%) Frame = +3 Query: 885 RTRRPCGSRAPTRRRTMTSRYSKASTFRARPGAKSRTPSSLTLSRGAPTRPWRSKRH*SR 1064 R R P G R P RR +S++ R P ++SR+ S T RG P R RS SR Sbjct: 337 RPRSPPGRRLPPPRR-----HSRSPPPRRPPHSRSRSISPRT-RRGPPLRRGRSDSSYSR 390 Query: 1065 S 1067 S Sbjct: 391 S 391 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 44,868,812 Number of extensions: 1021156 Number of successful extensions: 3923 Number of sequences better than 10.0: 20 Number of HSP's gapped: 3915 Number of HSP's successfully gapped: 20 Length of query: 554 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 448 Effective length of database: 11,155,509 Effective search space: 4997668032 Effective search space used: 4997668032 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
