ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4h05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059194:Os11g0227000 | 38 | 0.013 | 2 | AK109622:Os04g0556100 | 30 | 3.5 | 3 | AK108575:Os02g0621600 | 30 | 3.5 | 4 | AK071074:Os02g0621600 | 30 | 3.5 | 5 | AK121084:Os01g0824700 | 29 | 4.6 | 6 | Os11g0108800:Os11g0108800 | 29 | 4.6 | 7 | AK103973:Os08g0159000 | 29 | 6.0 | 8 | AK073617:Os08g0159000 | 29 | 6.0 | 9 | Os12g0226300:Os12g0226300 | 28 | 7.9 | 10 | AK104549:Os02g0816300 | 28 | 7.9 | 11 | AK071879:Os02g0816300 | 28 | 7.9 | 12 | AK067890:Os03g0754200 | 28 | 7.9 | 13 | AK065954:Os03g0754200 | 28 | 7.9 | 14 | AK059078:Os02g0816300 | 28 | 7.9 |
|---|
>AK059194:Os11g0227000 | Length = 83 Score = 37.7 bits (86), Expect = 0.013 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 3/35 (8%) Frame = +3 Query: 534 DYFVGRPSNHEQNTTPPP---PKPSFLAKLYDSLY 629 DYFVGRP+N +Q + PP + SFLAK Y +L+ Sbjct: 41 DYFVGRPANPQQPPSQPPRAQERSSFLAKWYSNLF 75
>AK109622:Os04g0556100 | Length = 173 Score = 29.6 bits (65), Expect = 3.5 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 12/80 (15%) Frame = -3 Query: 220 NPPLRLSQ-RWIDE------LTKLSFHTEQSEKAMGTADGYVPPGGALPCPSLMAD---- 74 +PP +S RW + ++ H +A G+ PPGG P PS + Sbjct: 24 SPPASVSAWRWRQHKNGRHMVVPMTVHCAACGRAAGSPS---PPGGGTPPPSTASSPPPS 80 Query: 73 -GRFSGCDQLCFLSPPCPVP 17 RFS L L PPC +P Sbjct: 81 SARFSPTRMLRRLRPPCRMP 100
>AK108575:Os02g0621600 | Length = 156 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +3 Query: 549 RPSNHEQNTTPPPPKPSFLA 608 RPS+ EQ PPPP P F A Sbjct: 24 RPSSEEQRAPPPPPPPLFPA 43
>AK071074:Os02g0621600 | Length = 156 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +3 Query: 549 RPSNHEQNTTPPPPKPSFLA 608 RPS+ EQ PPPP P F A Sbjct: 24 RPSSEEQRAPPPPPPPLFPA 43
>AK121084:Os01g0824700 | Length = 348 Score = 29.3 bits (64), Expect = 4.6 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +3 Query: 531 QDYFVGRPSNHEQNTTPPPPKPSFLAKLYDSLYIYFSKLL 650 + ++V P+ + PPPP+P D+LY+ F L Sbjct: 116 KQFYVVNPATRQWVQLPPPPRPDIGIMHLDNLYLAFDPTL 155
>Os11g0108800:Os11g0108800 | Length = 778 Score = 29.3 bits (64), Expect = 4.6 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -1 Query: 909 SESNARGGKKNRAELPKMKRLARFQYRIETYGPDSASNPPAVTCTAHH 766 S S G KK R K ++ F TY PD++S P A T HH Sbjct: 265 SASLILGRKKKR----KRNKVGFFSITPITYPPDNSSPPAAAAATLHH 308
>AK103973:Os08g0159000 | Length = 325 Score = 28.9 bits (63), Expect = 6.0 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +3 Query: 546 GRPSNHEQNTTPPPPKPS 599 GR + N TPPPPKPS Sbjct: 121 GRRQSSSSNPTPPPPKPS 138
>AK073617:Os08g0159000 | Length = 325 Score = 28.9 bits (63), Expect = 6.0 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +3 Query: 546 GRPSNHEQNTTPPPPKPS 599 GR + N TPPPPKPS Sbjct: 121 GRRQSSSSNPTPPPPKPS 138
>Os12g0226300:Os12g0226300 | Length = 337 Score = 28.5 bits (62), Expect = 7.9 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +2 Query: 335 GYCRLLHRPSGKHRRAQGERTAAGPP 412 G CRLL P+G R A R A PP Sbjct: 171 GCCRLLSAPAGHRRAAARRRAALRPP 196
>AK104549:Os02g0816300 | Length = 289 Score = 28.5 bits (62), Expect = 7.9 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 474 HNQSVARTYHQEDCSQPEQ 418 H S++RTYHQ++ SQ E+ Sbjct: 70 HGPSISRTYHQDEMSQMEE 88
>AK071879:Os02g0816300 | Length = 1172 Score = 28.5 bits (62), Expect = 7.9 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 474 HNQSVARTYHQEDCSQPEQ 418 H S++RTYHQ++ SQ E+ Sbjct: 953 HGPSISRTYHQDEMSQMEE 971
>AK067890:Os03g0754200 | Length = 226 Score = 28.5 bits (62), Expect = 7.9 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 55 RSRRTAHPP*ATDRAMLLLEVRIHPLSP 138 RS A PP RA+L+ E R HPL+P Sbjct: 6 RSPSVAPPPPPPPRAVLVAECRHHPLAP 33
>AK065954:Os03g0754200 | Length = 226 Score = 28.5 bits (62), Expect = 7.9 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 55 RSRRTAHPP*ATDRAMLLLEVRIHPLSP 138 RS A PP RA+L+ E R HPL+P Sbjct: 6 RSPSVAPPPPPPPRAVLVAECRHHPLAP 33
>AK059078:Os02g0816300 | Length = 299 Score = 28.5 bits (62), Expect = 7.9 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 474 HNQSVARTYHQEDCSQPEQ 418 H S++RTYHQ++ SQ E+ Sbjct: 80 HGPSISRTYHQDEMSQMEE 98 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,253,536 Number of extensions: 782482 Number of successful extensions: 2949 Number of sequences better than 10.0: 14 Number of HSP's gapped: 2932 Number of HSP's successfully gapped: 14 Length of query: 337 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 236 Effective length of database: 11,355,714 Effective search space: 2679948504 Effective search space used: 2679948504 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
