ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf4h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7TQP2:GP135_MOUSE Probable G-protein coupled receptor 135 - Mus... 33 1.8
2P31382:PMT2_YEAST Dolichyl-phosphate-mannose--protein mannosyltr... 32 4.1
3Q810L3:CHFR_MOUSE E3 ubiquitin-protein ligase CHFR - Mus musculu... 32 4.1
4Q7TQN7:GP135_RAT Probable G-protein coupled receptor 135 - Rattu... 31 7.0
5Q8R2H5:PHLD_RAT Phosphatidylinositol-glycan-specific phospholipa... 31 9.1

>Q7TQP2:GP135_MOUSE Probable G-protein coupled receptor 135 - Mus musculus (Mouse)|
          Length = 457
 Score = 33.1 bits (74), Expect = 1.8
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 54  SQPENRPSAMSDGQGNAPPGGTYPSAVPIAFSLCSV*NESLVNSS 188
           ++P  RP+A +  QG+A PGG   +A   A S  SV   +L N S
Sbjct: 5   ARPPGRPAASATLQGSAHPGGAASTATAAALSFSSVATVTLGNQS 49



to top

>P31382:PMT2_YEAST Dolichyl-phosphate-mannose--protein mannosyltransferase 2 -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 759

 Score = 32.0 bits (71), Expect = 4.1
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = -1

Query: 828 IETYGPDSASNPPAVTCTAHHGWACRSNW*LHRRRGMDSWRSETETKAEALDTARAF 658
           I+TY PD  SN   VTC  +      + W  +R RG+ SW SE ET  E L    ++
Sbjct: 365 IQTY-PDG-SNQQQVTCYGYKD--ANNEWFFNRERGLPSW-SENETDIEYLKPGTSY 416



to top

>Q810L3:CHFR_MOUSE E3 ubiquitin-protein ligase CHFR - Mus musculus (Mouse)|
          Length = 664

 Score = 32.0 bits (71), Expect = 4.1
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = -1

Query: 441 EDCSQPEQAQGGPAAVLSPWARRCLPDGR*SSLQ*PHTSTGFIL---AKQPAKVDGTEGG 271
           +DCS P Q       +LSP A+ CL + +      P TST  +L   +    + + T  G
Sbjct: 146 KDCSGPGQGDDPQVPLLSPMAQTCLEEPQ------PSTSTSDLLPTASTSSTEPELTSAG 199

Query: 270 DRNLGSGIRFNTWLC*LIHRSVSPRGGST 184
            ++  S    NT        S+SP+G S+
Sbjct: 200 QKHSSSSGPGNT--------SISPKGRSS 220



to top

>Q7TQN7:GP135_RAT Probable G-protein coupled receptor 135 - Rattus norvegicus (Rat)|
          Length = 457

 Score = 31.2 bits (69), Expect = 7.0
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 54  SQPENRPSAMSDGQGNAPPGGTYPSAVPIAFSLCSV*NESLVNSS 188
           ++P +RP+A +   G+A PGG   +A   A S  SV   +L N S
Sbjct: 5   ARPPSRPAASATLPGSAHPGGAASTATAAALSFSSVATVTLGNQS 49



to top

>Q8R2H5:PHLD_RAT Phosphatidylinositol-glycan-specific phospholipase D precursor -|
           Rattus norvegicus (Rat)
          Length = 843

 Score = 30.8 bits (68), Expect = 9.1
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = -3

Query: 277 GRRPKSWFRHQI*HMVVLINPPLRL--SQRW--IDELTKLSFHTEQSEKAMGTADGYVPP 110
           G    SWF + + H V + N  L L  S  W  I  + + S    Q +K++G   GY PP
Sbjct: 574 GEEDFSWFGYSL-HGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPP 632


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 177,104,276
Number of extensions: 3938080
Number of successful extensions: 11071
Number of sequences better than 10.0: 5
Number of HSP's gapped: 11053
Number of HSP's successfully gapped: 5
Length of query: 337
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 223
Effective length of database: 69,416,809
Effective search space: 15479948407
Effective search space used: 15479948407
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top