| Clone Name | FLbaf4h05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR381573.14| Zebrafish DNA sequence from clone DKEY-23M15 in linkage group 24, complete sequence Length = 120376 Score = 44.1 bits (22), Expect = 0.97 Identities = 22/22 (100%) Strand = Plus / Plus Query: 967 tgtgaaatgatgttgatttgtt 988 |||||||||||||||||||||| Sbjct: 31239 tgtgaaatgatgttgatttgtt 31260
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 709 ccagctgtccatgcctcgccggcggtggag 738 ||||||||||||||||||| |||| ||||| Sbjct: 7959873 ccagctgtccatgcctcgcgggcgttggag 7959902
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 709 ccagctgtccatgcctcgccggcggtggag 738 ||||||||||||||||||| |||| ||||| Sbjct: 21997 ccagctgtccatgcctcgcgggcgttggag 22026
>emb|BX005057.8| Zebrafish DNA sequence from clone DKEY-12L12 in linkage group 24, complete sequence Length = 238625 Score = 44.1 bits (22), Expect = 0.97 Identities = 22/22 (100%) Strand = Plus / Minus Query: 967 tgtgaaatgatgttgatttgtt 988 |||||||||||||||||||||| Sbjct: 85659 tgtgaaatgatgttgatttgtt 85638
>ref|NM_001072317.1| Oryza sativa (japonica cultivar-group) Os11g0154500 (Os11g0154500) mRNA, complete cds Length = 2329 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 gaacacgacgccgccgccgcc 589 ||||||||||||||||||||| Sbjct: 841 gaacacgacgccgccgccgcc 821
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 gtgcttgtgtgtggctactgt 343 ||||||||||||||||||||| Sbjct: 15637212 gtgcttgtgtgtggctactgt 15637232
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 gaacacgacgccgccgccgcc 589 ||||||||||||||||||||| Sbjct: 88119 gaacacgacgccgccgccgcc 88139
>gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosome 12, complete sequence Length = 202970 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 873 ctctgtttttctttcctcctc 893 ||||||||||||||||||||| Sbjct: 80027 ctctgtttttctttcctcctc 80007
>gb|AC008953.7| Homo sapiens chromosome 5 clone CTD-2339M3, complete sequence Length = 95401 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cccaaggagaaagaaccgccg 401 ||||||||||||||||||||| Sbjct: 86990 cccaaggagaaagaaccgccg 87010
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 gaacacgacgccgccgccgcc 589 ||||||||||||||||||||| Sbjct: 2534285 gaacacgacgccgccgccgcc 2534265
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 870 ctgctctgtttttctttcctc 890 ||||||||||||||||||||| Sbjct: 4060622 ctgctctgtttttctttcctc 4060642
>emb|AL121826.11|HS1010E17 Human DNA sequence from clone RP5-1010E17 on chromosome 20 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 126045 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 865 aagctctgctctgtttttctttcct 889 |||||||||||||||||| |||||| Sbjct: 93003 aagctctgctctgtttttttttcct 93027
>gb|AC035140.7| Homo sapiens chromosome 5 clone CTD-2631K10, complete sequence Length = 61965 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cccaaggagaaagaaccgccg 401 ||||||||||||||||||||| Sbjct: 12823 cccaaggagaaagaaccgccg 12843
>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR48D03, complete sequence Length = 175917 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 gtgcttgtgtgtggctactgt 343 ||||||||||||||||||||| Sbjct: 120443 gtgcttgtgtgtggctactgt 120463
>gb|AC007711.9|AC007711 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR02O09, complete sequence Length = 155751 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 gtgcttgtgtgtggctactgt 343 ||||||||||||||||||||| Sbjct: 26752 gtgcttgtgtgtggctactgt 26772
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 870 ctgctctgtttttctttcctc 890 ||||||||||||||||||||| Sbjct: 53480 ctgctctgtttttctttcctc 53500
>dbj|AK109939.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A12, full insert sequence Length = 1174 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 gaacacgacgccgccgccgcc 589 ||||||||||||||||||||| Sbjct: 720 gaacacgacgccgccgccgcc 700
>dbj|AK106277.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-H06, full insert sequence Length = 2330 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 gaacacgacgccgccgccgcc 589 ||||||||||||||||||||| Sbjct: 841 gaacacgacgccgccgccgcc 821
>emb|BX649611.8| Mouse DNA sequence from clone RP23-445E3 on chromosome 4, complete sequence Length = 41425 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 cggctgttttgctaaaataaa 318 ||||||||||||||||||||| Sbjct: 39723 cggctgttttgctaaaataaa 39743
>emb|AL844161.18| Mouse DNA sequence from clone RP23-343K11 on chromosome 4, complete sequence Length = 224031 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 cggctgttttgctaaaataaa 318 ||||||||||||||||||||| Sbjct: 298 cggctgttttgctaaaataaa 318
>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence Length = 218283 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 876 tgtttttctttcctcctctag 896 ||||||||||||||||||||| Sbjct: 46476 tgtttttctttcctcctctag 46496
>emb|CT025584.18| Mouse DNA sequence from clone RP23-78N7 on chromosome 16, complete sequence Length = 209542 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 874 tctgtttttctttcctcctct 894 ||||||||||||||||||||| Sbjct: 135441 tctgtttttctttcctcctct 135421
>emb|AL163613.2|CNS01RIJ Human chromosome 14 DNA sequence BAC R-25I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150312 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 859 ctttggaagctctgctctgtttttc 883 ||||||||||||||||||| ||||| Sbjct: 14406 ctttggaagctctgctctggttttc 14430
>gb|AC165257.2| Mus musculus BAC clone RP23-162D3 from chromosome 9, complete sequence Length = 181162 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 873 ctctgtttttctttcctcctc 893 ||||||||||||||||||||| Sbjct: 139376 ctctgtttttctttcctcctc 139356 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 171,995,115 Number of extensions: 9280955 Number of successful extensions: 213213 Number of sequences better than 10.0: 24 Number of HSP's gapped: 213213 Number of HSP's successfully gapped: 24 Length of query: 1011 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 988 Effective length of database: 18,503,978,556 Effective search space: 18281930813328 Effective search space used: 18281930813328 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)