ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf163l08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK071633:Os03g0295800 332 3e-91
2AK106050:Os03g0295800 302 2e-82
3Os11g0695700:Os11g0695700 33 0.44
4AK110646:Os03g0231300 32 0.98
5AK101193:Os07g0592600 31 1.7
6Os06g0654300:Os06g0654300 30 2.2
7Os12g0204100:Os12g0204100 30 2.9
8Os11g0429900:Os11g0429900 30 2.9
9Os07g0576100:Os07g0576100 30 3.7
10AK069063:Os02g0173800 30 3.7
11Os04g0691800:Os04g0691800 29 6.4
12AK111408:Os11g0111000 29 6.4
13AK107006:Os01g0311800 29 6.4
14AK105749:Os03g0605300 28 8.3
15AK106012:Os01g0914600 26 9.8

>AK071633:Os03g0295800 |
          Length = 265
 Score =  332 bits (851), Expect = 3e-91
 Identities = 158/225 (70%), Positives = 178/225 (79%), Gaps = 8/225 (3%)
 Frame = +3

Query: 183 KVSLALYYESLCPYCSRFIVTRLAGIFDSGLIHAVDLLLVPYGNAHVRGANNTITCQHGP 362
           KV LALYYE+LCPYCSRFIV  LAGIF+ G++ AVDL LVPYGNAHV GANNTI+CQHG 
Sbjct: 38  KVPLALYYETLCPYCSRFIVNHLAGIFEDGIVDAVDLRLVPYGNAHVVGANNTISCQHGS 97

Query: 363 DECLLNNVEACAIEAWPDLNVHFGFINCVEDLVMNRKREEWQSCFQKQGLDPKPVMECYN 542
           +EC LN VEACAI+AWPDL VHF FI CVEDLV+N K+ EW+SCF K  LDPKPV +CY 
Sbjct: 98  EECFLNTVEACAIDAWPDLRVHFRFIYCVEDLVVNHKQREWESCFGKLNLDPKPVTDCYK 157

Query: 543 SEHGHKLSLKYGKQTDALVPPHKYVPWVVVDGEPLYEDYENFEAYVCKAYKGHPPKICQG 722
            E GH+LSLKYG+QTDAL PPHKYVPWVVVDG+PLYEDYENFEAY+CKAYKGHPPK+C+G
Sbjct: 158 GERGHQLSLKYGRQTDALQPPHKYVPWVVVDGQPLYEDYENFEAYICKAYKGHPPKVCEG 217

Query: 723 LGR-DYPIVQQVVEVGNGVT-YNSGDFELDD------KIKMVSAD 833
           L R   P V +V E  N V+ Y+SGD  L        KIK V  D
Sbjct: 218 LARPPTPTVLEVAEAVNRVSYYDSGDIRLKPDEDGHAKIKKVVPD 262



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>AK106050:Os03g0295800 |
          Length = 256

 Score =  302 bits (774), Expect = 2e-82
 Identities = 147/225 (65%), Positives = 170/225 (75%), Gaps = 8/225 (3%)
 Frame = +3

Query: 183 KVSLALYYESLCPYCSRFIVTRLAGIFDSGLIHAVDLLLVPYGNAHVRGANNTITCQHGP 362
           KV +ALYYESLCPY + F+V  LA +F  GL+ AVDL LVPYGNA V+  +  I+CQHG 
Sbjct: 31  KVDVALYYESLCPYSAMFVVGSLAKVFRDGLLDAVDLSLVPYGNARVK--DGKISCQHGS 88

Query: 363 DECLLNNVEACAIEAWPDLNVHFGFINCVEDLVMNRKREEWQSCFQKQGLDPKPVMECYN 542
           +EC LN VEACAI+AWPDL VHF FI CVEDLV+N K+ EW+SCF K  LDPKPV +CY 
Sbjct: 89  EECFLNTVEACAIDAWPDLRVHFRFIYCVEDLVVNHKQREWESCFGKLNLDPKPVTDCYK 148

Query: 543 SEHGHKLSLKYGKQTDALVPPHKYVPWVVVDGEPLYEDYENFEAYVCKAYKGHPPKICQG 722
            E GH+LSLKYG+QTDAL PPHKYVPWVVVDG+PLYEDYENFEAY+CKAYKGHPPK+C+G
Sbjct: 149 GERGHQLSLKYGRQTDALQPPHKYVPWVVVDGQPLYEDYENFEAYICKAYKGHPPKVCEG 208

Query: 723 LGR-DYPIVQQVVEVGNGVT-YNSGDFELDD------KIKMVSAD 833
           L R   P V +V E  N V+ Y+SGD  L        KIK V  D
Sbjct: 209 LARPPTPTVLEVAEAVNRVSYYDSGDIRLKPDEDGHAKIKKVVPD 253



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>Os11g0695700:Os11g0695700 |
          Length = 1370

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
 Frame = -3

Query: 804 RARNRQSCR*HRCLPPPPVVRLGSH-GPALGKSWEDG-PCTPCRRKL---QSSRNPRRAA 640
           R R R      RCL PPP    GSH G  L  +  D    TP  R L     +R PRRA 
Sbjct: 163 RNRRRPPSIRGRCLLPPPAGPRGSHIGTTLAPARPDRVKPTPVSRSLHPHSRARGPRRAE 222

Query: 639 RHQPPPMERTCAEAQVHQSVSHT*AKACGHAHCCSTP*QAWGQAPVSGS 493
           R +  P       ++ H            HA     P     + P SGS
Sbjct: 223 RLRVGPPRAASTASRAHAPRPTPNPSVASHA-----PRSRRAEPPTSGS 266



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>AK110646:Os03g0231300 |
          Length = 256

 Score = 31.6 bits (70), Expect = 0.98
 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
 Frame = -3

Query: 804 RARNRQSCR*HRCLPPPPVVRLGSHGP------ALGKSWEDGPCTPCRRKLQSSRNPR-- 649
           R R R+  R HRC  PP   R G           + +     P + CRR+  SSR  R  
Sbjct: 105 RGRRRRQIRRHRCSLPPSSPRRGEGSSRRAPRRQIRRHRYSPPPSSCRREEGSSRRARAR 164

Query: 648 --RAARHQPPPMERTCAEAQVHQSVSHT*A--KACGHAHCCSTP 529
             R A  +P P  R  A   +    + T A  +     H CS P
Sbjct: 165 EGRGAAGEPAPEGRGAAGELLAARSASTAAPRRRQTRRHRCSPP 208



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>AK101193:Os07g0592600 |
          Length = 605

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 195 ALYYESLCPYCSRFIVTRLAGIFDSGLIHAVDLL 296
           ++Y + +C  C R  V RL  +F SGL+ A+  L
Sbjct: 215 SMYAQMVCGLCQRNDVLRLGAVFASGLLRAIRFL 248



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>Os06g0654300:Os06g0654300 |
          Length = 1067

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -3

Query: 801 ARNRQSCR*HRCLPPPPVVRLGSH---GPALGKS--WEDGPCTPCRRKLQSSRNPRRAAR 637
           AR R S   H  LPPPP   LG H    P+ G++      P  P RRKL  SR  R A  
Sbjct: 2   ARGRDSL--HPFLPPPPPRALGGHFILFPSHGRAPPLRSLPLDP-RRKLALSRLLRVAFA 58

Query: 636 HQPPPMERTCA 604
              P +  TCA
Sbjct: 59  LTVPAVLATCA 69



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>Os12g0204100:Os12g0204100 |
          Length = 267

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 759 PPPVVRLGSHGPALGKSWEDGPCTPCRRK 673
           PPP  R   HGP   +SW   PC P  +K
Sbjct: 49  PPPASRSRGHGPR-RRSWRRRPCPPLAKK 76



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>Os11g0429900:Os11g0429900 |
          Length = 121

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
 Frame = -3

Query: 843 INCHQPTPS*SCHRARNRQSCR*HRCLPPPPVVRLGSHGPAL----GKSWEDGPCT---P 685
           I    PTP    H +  R+  R     PPPP+ RLG  G +L    G+     P +   P
Sbjct: 5   IRWRPPTP----HASTGRRPHRFEHRSPPPPL-RLGDTGSSLLEVRGRRIRSTPTSRRRP 59

Query: 684 CRRKLQSSRNPRRAARHQPPP 622
           C R+   S  P+R     PPP
Sbjct: 60  CPRRTAFSSVPKR-----PPP 75



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>Os07g0576100:Os07g0576100 |
          Length = 478

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
 Frame = +3

Query: 189 SLALYYESLCPYCSRFIVTRLAGIFDSGLIHAVDLLLVPYGNAHV---RGANNTITCQHG 359
           S ++Y + LC  C R  V R+  +F + L+ A+  L + +         G  N       
Sbjct: 211 SQSMYAQMLCGLCQRHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNPRVTDPS 270

Query: 360 PDECLLNNVEACAIEAWP 413
             EC   +        WP
Sbjct: 271 DRECSRGDWTGIVTRLWP 288



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>AK069063:Os02g0173800 |
          Length = 350

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 330 ANNTITCQHGPDECLLNN--VEACAIEAWPDLNVHFGFINCVEDLVMNRKREEWQS 491
           AN+T TC     E   N   +  C + AW   N  +GF+   ++L +++K   W+S
Sbjct: 153 ANDTSTCD---PEGTANGMAIVPCGLIAWSIFNDTYGFVRNSKNLPVDKKNISWKS 205



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>Os04g0691800:Os04g0691800 |
          Length = 1021

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 8/115 (6%)
 Frame = -3

Query: 762 PPPPVVRLGSHGPALGKSWEDGPCTPCRRKLQSSRNPRRAARHQPPPMERTCAEAQVHQS 583
           PP P V    H P    S E     P  R   +  +    A+ QPPP E        H  
Sbjct: 141 PPAPAVHHHQHQPPQSVSAEQ----PDSRPPPAFPHGEAQAQAQPPPPESESKGKTTHDH 196

Query: 582 VSHT*AKAC---GHAHCCSTP*QAWGQA-----PVSGSTTAIPRACGSSPGLPRS 442
                 ++      A   S P +A   A     P  G T  +PR  G +PG P S
Sbjct: 197 EPPRVFRSVPVQAPAPAASQPRRATLHAVAAPPPPPGQTVIMPRPPGPAPGPPPS 251



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>AK111408:Os11g0111000 |
          Length = 252

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
 Frame = -3

Query: 837 CHQPTPS*SCHRARNRQSCR*HRCLPPPPVVRLGSHG---PALGKSWEDGPCTPCRR 676
           C   T   S  RA  R+  R HR  PPPPV          P+ G      PCT  RR
Sbjct: 178 CAVGTSCPSSRRAARRRPRRTHRTPPPPPVGLFPGGAVPDPSPGAGEVVAPCTADRR 234



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>AK107006:Os01g0311800 |
          Length = 557

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 306 YGNAHVRGANNTITCQH--GPDECLLNNVEACAIEAWPDLNVHFGF 437
           Y    ++G +NT+T Q    P++     ++ CAI A PDL  +  F
Sbjct: 409 YNRLPMQGQSNTVTAQGRTDPNQNTGTTIQGCAIVAAPDLAANTAF 454



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>AK105749:Os03g0605300 |
          Length = 765

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 601 GTSASVCFPYLSESLWPCSLL*HSMTGLGSSPCFWKHDC 485
           GT+  V    L   +WP S   +   GLG  P +WK +C
Sbjct: 122 GTAGDVVVGVLDTGVWPESRS-YDDAGLGEVPSWWKGEC 159



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>AK106012:Os01g0914600 |
          Length = 589

 Score = 25.8 bits (55), Expect(2) = 9.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 683 ADVSFKVLVILVERLAINHHPWNVLVRRHKCIS 585
           AD +  V   L E  + +  PWN LVR H   S
Sbjct: 64  ADHADSVFAHLAEEASRHAFPWNTLVRLHAAAS 96



 Score = 20.8 bits (42), Expect(2) = 9.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 510 APVSGSTTAIPRACGSSPG 454
           AP + +  A+ +ACG +PG
Sbjct: 113 APDAYTFPAVLKACGCAPG 131


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,186,332
Number of extensions: 659209
Number of successful extensions: 2415
Number of sequences better than 10.0: 15
Number of HSP's gapped: 2407
Number of HSP's successfully gapped: 16
Length of query: 351
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 249
Effective length of database: 11,315,673
Effective search space: 2817602577
Effective search space used: 2817602577
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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