| Clone Name | FLbaf163l08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB085212.1| Triticum aestivum Tria27 mRNA for 27K protein, partial cds Length = 798 Score = 297 bits (150), Expect = 4e-77 Identities = 312/366 (85%) Strand = Plus / Plus Query: 338 caccatcacctgccagcatggccccgatgaatgccttctgaacaacgtggaggcttgcgc 397 ||||||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 183 caccatctcctgtcagcatggccccgaggaatgccttctcaacaccgtggaggcttgcgc 242 Query: 398 catcgaggcctggccggatttgaatgtgcatttcggtttcatcaactgcgtggaagacct 457 |||||| ||||||||||| |||| |||||| |||| ||||| |||||||| ||||| Sbjct: 243 catcgacgcctggccggacgtgaaggtgcatctcggcttcatttactgcgtgtcggacct 302 Query: 458 ggtgatgaaccgcaagcgcgaggaatggcagtcgtgcttccagaaacaggggcttgaccc 517 |||| |||| ||||| | ||| ||| ||||||||||||||||||||||||||||||| Sbjct: 303 ggtgttgaagaacaagcaccgggagtgggagtcgtgcttccagaaacaggggcttgaccc 362 Query: 518 caagcctgtcatggagtgctacaacagtgagcatggccacaagctttcgctcaagtatgg 577 ||||| |||| |||||||||||| | |||| ||||||||| || |||||| ||||||| Sbjct: 363 aaagccagtcacggagtgctacaagggcgagcgtggccacaatctatcgctcgagtatgg 422 Query: 578 gaaacagactgatgcacttgtgcctccgcacaagtacgttccatgggtggtggttgatgg 637 || |||||| | || || |||||||| ||| ||| |||||||||||||||||| || || Sbjct: 423 gagacagacagctgagctcgtgcctcctcaccagttcgttccatgggtggtggtcgacgg 482 Query: 638 cgagccgctctacgaggattacgagaactttgaagcttacgtctgcaaggcgtacaaggg 697 | ||||||||||| | ||||||| |||||| |||||||| ||||||||||||||||||| Sbjct: 483 caagccgctctacaacgattacgggaacttcaaagcttacatctgcaaggcgtacaaggg 542 Query: 698 ccatcc 703 | |||| Sbjct: 543 ctatcc 548 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 199 tctactacgagtcgctctgcccctact 225 |||||||||||||||| |||||||||| Sbjct: 47 tctactacgagtcgctgtgcccctact 73
>emb|CT832278.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121J01, full insert sequence Length = 1033 Score = 270 bits (136), Expect = 9e-69 Identities = 244/280 (87%) Strand = Plus / Plus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 215 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 274 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||||||||||||| Sbjct: 275 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccctacggcaac 334 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccagcatggccccgatgaatgcctt 374 ||||||||| ||||||||||||||||||| | ||||||||||| ||| || ||| | Sbjct: 335 gcccacgtcgtcggcgccaacaacaccatctcttgccagcatggaagcgaggagtgcttc 394 Query: 375 ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttgaatgtgcatttcggt 434 ||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||| | Sbjct: 395 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttgagagtgcatttccgc 454 Query: 435 ttcatcaactgcgtggaagacctggtgatgaaccgcaagc 474 |||||| |||||||||| ||||||||| |||||| ||||| Sbjct: 455 ttcatctactgcgtggaggacctggtggtgaaccacaagc 494 Score = 151 bits (76), Expect = 6e-33 Identities = 154/180 (85%) Strand = Plus / Plus Query: 552 ggccacaagctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaag 611 |||||| |||| |||||||||||||| | ||||||||| || | |||||| |||||| Sbjct: 572 ggccaccagctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaag 631 Query: 612 tacgttccatgggtggtggttgatggcgagccgctctacgaggattacgagaactttgaa 671 |||||||| |||||||| || || || |||||||||||||||||||||||||||| || Sbjct: 632 tacgttccctgggtggtcgtcgacggtcagccgctctacgaggattacgagaacttcgag 691 Query: 672 gcttacgtctgcaaggcgtacaagggccatcctcccaagatttgccaagggctgggccgt 731 |||||| |||||||||| ||||||||||||||||||||| | ||| | ||||||| |||| Sbjct: 692 gcttacatctgcaaggcctacaagggccatcctcccaaggtgtgcgaggggctggcccgt 751
>ref|NM_001056362.1| Oryza sativa (japonica cultivar-group) Os03g0295800 (Os03g0295800) mRNA, complete cds Length = 1074 Score = 270 bits (136), Expect = 9e-69 Identities = 244/280 (87%) Strand = Plus / Plus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 225 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 284 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||| ||||||||| Sbjct: 285 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 344 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccagcatggccccgatgaatgcctt 374 ||||||||| ||||||||||||||||||| | ||||||||||| ||| || ||| | Sbjct: 345 gcccacgtcgtcggcgccaacaacaccatctcttgccagcatggaagcgaggagtgcttc 404 Query: 375 ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttgaatgtgcatttcggt 434 ||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||| || Sbjct: 405 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttgagagtgcatttccgt 464 Query: 435 ttcatcaactgcgtggaagacctggtgatgaaccgcaagc 474 |||||| |||||||||| ||||||||| |||||| ||||| Sbjct: 465 ttcatctactgcgtggaggacctggtggtgaaccacaagc 504 Score = 151 bits (76), Expect = 6e-33 Identities = 154/180 (85%) Strand = Plus / Plus Query: 552 ggccacaagctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaag 611 |||||| |||| |||||||||||||| | ||||||||| || | |||||| |||||| Sbjct: 582 ggccaccagctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaag 641 Query: 612 tacgttccatgggtggtggttgatggcgagccgctctacgaggattacgagaactttgaa 671 |||||||| |||||||| || || || |||||||||||||||||||||||||||| || Sbjct: 642 tacgttccctgggtggtcgtcgacggtcagccgctctacgaggattacgagaacttcgag 701 Query: 672 gcttacgtctgcaaggcgtacaagggccatcctcccaagatttgccaagggctgggccgt 731 |||||| |||||||||| ||||||||||||||||||||| | ||| | ||||||| |||| Sbjct: 702 gcttacatctgcaaggcctacaagggccatcctcccaaggtgtgcgaggggctggcccgt 761
>dbj|AK071633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102J23, full insert sequence Length = 1076 Score = 270 bits (136), Expect = 9e-69 Identities = 244/280 (87%) Strand = Plus / Plus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 226 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 285 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||| ||||||||| Sbjct: 286 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 345 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccagcatggccccgatgaatgcctt 374 ||||||||| ||||||||||||||||||| | ||||||||||| ||| || ||| | Sbjct: 346 gcccacgtcgtcggcgccaacaacaccatctcttgccagcatggaagcgaggagtgcttc 405 Query: 375 ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttgaatgtgcatttcggt 434 ||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||| || Sbjct: 406 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttgagagtgcatttccgt 465 Query: 435 ttcatcaactgcgtggaagacctggtgatgaaccgcaagc 474 |||||| |||||||||| ||||||||| |||||| ||||| Sbjct: 466 ttcatctactgcgtggaggacctggtggtgaaccacaagc 505 Score = 151 bits (76), Expect = 6e-33 Identities = 154/180 (85%) Strand = Plus / Plus Query: 552 ggccacaagctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaag 611 |||||| |||| |||||||||||||| | ||||||||| || | |||||| |||||| Sbjct: 583 ggccaccagctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaag 642 Query: 612 tacgttccatgggtggtggttgatggcgagccgctctacgaggattacgagaactttgaa 671 |||||||| |||||||| || || || |||||||||||||||||||||||||||| || Sbjct: 643 tacgttccctgggtggtcgtcgacggtcagccgctctacgaggattacgagaacttcgag 702 Query: 672 gcttacgtctgcaaggcgtacaagggccatcctcccaagatttgccaagggctgggccgt 731 |||||| |||||||||| ||||||||||||||||||||| | ||| | ||||||| |||| Sbjct: 703 gcttacatctgcaaggcctacaagggccatcctcccaaggtgtgcgaggggctggcccgt 762
>dbj|AK068091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A15, full insert sequence Length = 1161 Score = 196 bits (99), Expect = 1e-46 Identities = 189/219 (86%) Strand = Plus / Plus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 231 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 290 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||| ||||||||| Sbjct: 291 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 350 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccagcatggccccgatgaatgcctt 374 ||||||||| ||| ||||||||||||||| | ||||||||||| ||| || ||| | Sbjct: 351 gcccacgtcgtcggtgccaacaacaccatctcttgccagcatggaagcgaggagtgcttc 410 Query: 375 ctgaacaacgtggaggcttgcgccatcgaggcctggccg 413 ||||||| ||||||||||||||||||||| || |||||| Sbjct: 411 ctgaacaccgtggaggcttgcgccatcgatgcatggccg 449 Score = 129 bits (65), Expect = 2e-26 Identities = 116/133 (87%) Strand = Plus / Plus Query: 599 gcctccgcacaagtacgttccatgggtggtggttgatggcgagccgctctacgaggatta 658 |||||| |||||||||||||| |||||||| || || || | ||||||||||||||||| Sbjct: 742 gcctccccacaagtacgttccttgggtggtcgtcgacggtcatccgctctacgaggatta 801 Query: 659 cgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaagatttgcca 718 ||||||||| || |||||| |||||||||| ||||||||||||||||||||| | ||| | Sbjct: 802 cgagaacttcgaggcttacttctgcaaggcctacaagggccatcctcccaaggtgtgcga 861 Query: 719 agggctgggccgt 731 ||||||| |||| Sbjct: 862 ggggctggcccgt 874
>emb|CT832277.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA002D02, full insert sequence Length = 820 Score = 172 bits (87), Expect = 2e-39 Identities = 141/159 (88%) Strand = Plus / Plus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 215 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 274 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||||||||||||| Sbjct: 275 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccctacggcaac 334 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccag 353 ||||||||| ||||||||||||||||||| | |||||| Sbjct: 335 gcccacgtcgtcggcgccaacaacaccatctcttgccag 373
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 165 bits (83), Expect = 4e-37 Identities = 140/159 (88%) Strand = Plus / Minus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 44523 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 44464 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||| ||||||||| Sbjct: 44463 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 44404 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccag 353 ||||||||| ||||||||||||||||||| | |||||| Sbjct: 44403 gcccacgtcgtcggcgccaacaacaccatctcttgccag 44365 Score = 87.7 bits (44), Expect = 8e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 652 aggattacgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaaga 711 |||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| Sbjct: 41517 aggattacgagaacttcgaggcttacatctgcaaggcctacaagggccatcctcccaagg 41458 Query: 712 tttgccaagggctgggccgt 731 | ||| | ||||||| |||| Sbjct: 41457 tgtgcgaggggctggcccgt 41438 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 375 ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttg 419 ||||||| ||||||||||||||||||||| || |||||||||||| Sbjct: 42237 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttg 42193 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Minus Query: 559 agctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaagtacgttc 618 |||| |||||||||||||| | ||||||||| || | |||||| ||||||||||||| Sbjct: 41767 agctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaagtacgttc 41708 Query: 619 catgggtggtggttgatggcgagccgctctacgagg 654 | |||||||| || || || ||||||||||||||| Sbjct: 41707 cctgggtggtcgtcgacggtcagccgctctacgagg 41672 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 193 tggcgctctactacgagtcgctctgcccctact 225 |||||||||||||||||||||| |||||||||| Sbjct: 42624 tggcgctctactacgagtcgctgtgcccctact 42592 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 280 acgccgtcgacctcctgctcgtcccctacggcaacgccc 318 |||||||||||||| |||||||||||||||||||||| Sbjct: 42537 acgccgtcgacctctccctcgtcccctacggcaacgccc 42499
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 165 bits (83), Expect = 4e-37 Identities = 140/159 (88%) Strand = Plus / Minus Query: 195 gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 254 ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 10329158 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 10329099 Query: 255 gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 314 ||||||||||| |||| || || ||||||||||||||| |||||||| ||||||||| Sbjct: 10329098 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 10329039 Query: 315 gcccacgtccgcggcgccaacaacaccatcacctgccag 353 ||||||||| ||||||||||||||||||| | |||||| Sbjct: 10329038 gcccacgtcgtcggcgccaacaacaccatctcttgccag 10329000 Score = 87.7 bits (44), Expect = 8e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 652 aggattacgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaaga 711 |||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| Sbjct: 10326152 aggattacgagaacttcgaggcttacatctgcaaggcctacaagggccatcctcccaagg 10326093 Query: 712 tttgccaagggctgggccgt 731 | ||| | ||||||| |||| Sbjct: 10326092 tgtgcgaggggctggcccgt 10326073 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 375 ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttg 419 ||||||| ||||||||||||||||||||| || |||||||||||| Sbjct: 10326872 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttg 10326828 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Minus Query: 559 agctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaagtacgttc 618 |||| |||||||||||||| | ||||||||| || | |||||| ||||||||||||| Sbjct: 10326402 agctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaagtacgttc 10326343 Query: 619 catgggtggtggttgatggcgagccgctctacgagg 654 | |||||||| || || || ||||||||||||||| Sbjct: 10326342 cctgggtggtcgtcgacggtcagccgctctacgagg 10326307 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 193 tggcgctctactacgagtcgctctgcccctact 225 |||||||||||||||||||||| |||||||||| Sbjct: 10327259 tggcgctctactacgagtcgctgtgcccctact 10327227 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 280 acgccgtcgacctcctgctcgtcccctacggcaacgccc 318 |||||||||||||| |||||||||||||||||||||| Sbjct: 10327172 acgccgtcgacctctccctcgtcccctacggcaacgccc 10327134 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cgcgccctccgcctccgcctc 119 ||||||||||||||||||||| Sbjct: 3085857 cgcgccctccgcctccgcctc 3085877
>gb|DQ244863.1| Zea mays clone 11235 mRNA sequence Length = 931 Score = 155 bits (78), Expect = 4e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 183 aaggtctccctggcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtc 242 ||||||||||||| |||||||||||||||| | ||||| ||||||||||| ||||||||| Sbjct: 122 aaggtctccctggagctctactacgagtcgttgtgcccgtactgctcgcggttcatcgtc 181 Query: 243 acccgcctcgccgggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtc 302 | ||||||||| ||||||||||| |||||| ||| |||||||| |||||| ||||||| Sbjct: 182 aaccgcctcgcggggatcttcgaggacgggctgatcgacgccgtccacctccggctcgtc 241 Query: 303 ccctacggcaacgc 316 |||||||||||||| Sbjct: 242 ccctacggcaacgc 255 Score = 145 bits (73), Expect = 4e-31 Identities = 259/321 (80%) Strand = Plus / Plus Query: 378 aacaacgtggaggcttgcgccatcgaggcctggccggatttgaatgtgcatttcggtttc 437 |||| |||||| |||||||||||||| |||||||||||| || ||||||||||| | ||| Sbjct: 314 aacaccgtggaagcttgcgccatcgacgcctggccggatctggatgtgcatttcagcttc 373 Query: 438 atcaactgcgtggaagacctggtgatgaaccgcaagcgcgaggaatggcagtcgtgcttc 497 ||| |||||||||| ||||||||| |||| || || | |||| ||| |||| |||||| Sbjct: 374 atctactgcgtggaggacctggtggtgaaacggcagtacaaggactgggagtcctgcttc 433 Query: 498 cagaaacaggggcttgaccccaagcctgtcatggagtgctacaacagtgagcatggccac 557 |||| | ||| || ||||||||||| || | || |||||||| || |||||||||||| Sbjct: 434 gagaagctgggcctcgaccccaagcccgtaacagaatgctacaaaagcgagcatggccac 493 Query: 558 aagctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaagtacgtt 617 ||||| ||||||||| | ||| ||||| || || || | ||| |||||| |||||| Sbjct: 494 aagctcgagctcaagtacgcgaaccagaccgacgctctcgagccgccgcaccggtacgtg 553 Query: 618 ccatgggtggtggttgatggcgagccgctctacgaggattacgagaactttgaagcttac 677 || |||||||| || || || |||| || |||||||||||||| || || |||||| Sbjct: 554 ccctgggtggtcgtcgacgggcagcccctgcttgaggattacgagaatttcgaggcttac 613 Query: 678 gtctgcaaggcgtacaagggc 698 |||||||||| ||||||||| Sbjct: 614 atctgcaaggcttacaagggc 634
>emb|CT831595.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA059P08, full insert sequence Length = 1000 Score = 151 bits (76), Expect = 6e-33 Identities = 154/180 (85%) Strand = Plus / Plus Query: 552 ggccacaagctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaag 611 |||||| |||| |||||||||||||| | ||||||||| || | |||||| |||||| Sbjct: 535 ggccaccagctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaag 594 Query: 612 tacgttccatgggtggtggttgatggcgagccgctctacgaggattacgagaactttgaa 671 |||||||| |||||||| || || || |||||||||||||||||||||||||||| || Sbjct: 595 tacgttccctgggtggtcgtcgacggtcagccgctctacgaggattacgagaacttcgag 654 Query: 672 gcttacgtctgcaaggcgtacaagggccatcctcccaagatttgccaagggctgggccgt 731 |||||| |||||||||| ||||||||||||||||||||| | ||| | ||||||| |||| Sbjct: 655 gcttacatctgcaaggcctacaagggccatcctcccaaggtgtgcgaggggctggcccgt 714 Score = 113 bits (57), Expect = 1e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 346 cctgccagcatggccccgatgaatgccttctgaacaacgtggaggcttgcgccatcgagg 405 ||||||||||||| ||| || ||| | ||||||| ||||||||||||||||||||| | Sbjct: 329 cctgccagcatggaagcgaggagtgcttcctgaacaccgtggaggcttgcgccatcgatg 388 Query: 406 cctggccggatttgaatgtgcatttcggtttcatcaactgcgtggaagacctggtgatga 465 | ||||||||||||| ||||||||| | |||||| |||||||||| ||||||||| ||| Sbjct: 389 catggccggatttgagagtgcatttccgcttcatctactgcgtggaggacctggtggtga 448 Query: 466 accgcaagc 474 ||| ||||| Sbjct: 449 accacaagc 457 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 193 tggcgctctactacgagtcgctctgcccctact 225 |||||||||||||||||||||| |||||||||| Sbjct: 182 tggcgctctactacgagtcgctgtgcccctact 214 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 280 acgccgtcgacctcctgctcgtcccctacggcaacgccc 318 |||||||||||||| |||||||||||||||||||||| Sbjct: 269 acgccgtcgacctctccctcgtcccctacggcaacgccc 307
>dbj|AK106050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F01, full insert sequence Length = 942 Score = 151 bits (76), Expect = 6e-33 Identities = 154/180 (85%) Strand = Plus / Plus Query: 552 ggccacaagctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaag 611 |||||| |||| |||||||||||||| | ||||||||| || | |||||| |||||| Sbjct: 502 ggccaccagctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaag 561 Query: 612 tacgttccatgggtggtggttgatggcgagccgctctacgaggattacgagaactttgaa 671 |||||||| |||||||| || || || |||||||||||||||||||||||||||| || Sbjct: 562 tacgttccctgggtggtcgtcgacggtcagccgctctacgaggattacgagaacttcgag 621 Query: 672 gcttacgtctgcaaggcgtacaagggccatcctcccaagatttgccaagggctgggccgt 731 |||||| |||||||||| ||||||||||||||||||||| | ||| | ||||||| |||| Sbjct: 622 gcttacatctgcaaggcctacaagggccatcctcccaaggtgtgcgaggggctggcccgt 681 Score = 121 bits (61), Expect = 5e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 346 cctgccagcatggccccgatgaatgccttctgaacaacgtggaggcttgcgccatcgagg 405 ||||||||||||| ||| || ||| | ||||||| ||||||||||||||||||||| | Sbjct: 296 cctgccagcatggaagcgaggagtgcttcctgaacaccgtggaggcttgcgccatcgatg 355 Query: 406 cctggccggatttgaatgtgcatttcggtttcatcaactgcgtggaagacctggtgatga 465 | ||||||||||||| ||||||||| |||||||| |||||||||| ||||||||| ||| Sbjct: 356 catggccggatttgagagtgcatttccgtttcatctactgcgtggaggacctggtggtga 415 Query: 466 accgcaagc 474 ||| ||||| Sbjct: 416 accacaagc 424 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 193 tggcgctctactacgagtcgctctgcccctact 225 |||||||||||||||||||||| |||||||||| Sbjct: 149 tggcgctctactacgagtcgctgtgcccctact 181 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 280 acgccgtcgacctcctgctcgtcccctacggcaacgccc 318 |||||||||||||| |||||||||||||||||||||| Sbjct: 236 acgccgtcgacctctccctcgtcccctacggcaacgccc 274
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 cctccgcctccgcctcgtcctgc 126 ||||||||||||||||||||||| Sbjct: 2544015 cctccgcctccgcctcgtcctgc 2544037 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 2226881 gcgccatccgcctccgcctcgtcct 2226905
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 cctccgcctccgcctcgtcctgc 126 ||||||||||||||||||||||| Sbjct: 123994 cctccgcctccgcctcgtcctgc 123972
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgtcgcgccctccgcctccgcc 117 |||||||||||||||||||||| Sbjct: 735210 cgtcgcgccctccgcctccgcc 735189
>emb|CR855228.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0403H10-OSIGBa0105A11, complete sequence Length = 142564 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 6260 gcgccgtccgcctccgcctcgtcct 6236
>dbj|AK238088.1| Sus scrofa mRNA, clone:TCH010041F08, expressed in trachea Length = 1404 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 cctccgcctcgtcctgctcct 130 ||||||||||||||||||||| Sbjct: 507 cctccgcctcgtcctgctcct 527
>ref|NM_001072676.1| Oryza sativa (japonica cultivar-group) Os12g0145200 (Os12g0145200) mRNA, complete cds Length = 1514 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 452 gcgccatccgcctccgcctcgtcct 476
>ref|NM_001055552.1| Oryza sativa (japonica cultivar-group) Os03g0157800 (Os03g0157800) mRNA, complete cds Length = 2583 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cgcgccctccgcctccgcctc 119 ||||||||||||||||||||| Sbjct: 176 cgcgccctccgcctccgcctc 196
>ref|XM_001130704.1| PREDICTED: Homo sapiens hypothetical protein LOC731762 (LOC731762), mRNA Length = 696 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 tcccgtcgcgccctccgcctccgcc 117 ||||| ||||||||||||||||||| Sbjct: 359 tcccgccgcgccctccgcctccgcc 335
>ref|XM_001128992.1| PREDICTED: Homo sapiens hypothetical protein LOC728984 (LOC728984), mRNA Length = 696 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 tcccgtcgcgccctccgcctccgcc 117 ||||| ||||||||||||||||||| Sbjct: 359 tcccgccgcgccctccgcctccgcc 335
>ref|XM_001090735.1| PREDICTED: Macaca mulatta similar to calcium channel, voltage-dependent, alpha 2/delta subunit 2 isoform b (LOC702429), mRNA Length = 6453 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 1161 cacgccgtcgacctcctgctc 1141
>ref|NM_100582.2| Arabidopsis thaliana catalytic (AT1G07080) mRNA, complete cds Length = 1190 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 tactacgagtcgctctgcccctactgctc 229 ||||||||||| ||||| ||||||||||| Sbjct: 189 tactacgagtctctctgtccctactgctc 217
>ref|NM_006030.2| Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 2 (CACNA2D2), transcript variant 2, mRNA Length = 5337 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 290 cacgccgtcgacctcctgctc 270
>ref|NM_001005505.1| Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 2 (CACNA2D2), transcript variant 1, mRNA Length = 5343 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 290 cacgccgtcgacctcctgctc 270
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 tccgcctccgcctcgtcctgctcct 130 |||||||||||||||||||| |||| Sbjct: 229582 tccgcctccgcctcgtcctggtcct 229558
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 cggcgccctcctgccgccggc 163 ||||||||||||||||||||| Sbjct: 117144 cggcgccctcctgccgccggc 117124
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 14377 gcgccatccgcctccgcctcgtcct 14401
>gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosome 14, complete sequence Length = 196744 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 967 atttctgttcaagttaatatg 987 ||||||||||||||||||||| Sbjct: 158020 atttctgttcaagttaatatg 158000
>dbj|AK096232.1| Homo sapiens cDNA FLJ38913 fis, clone NT2NE2008017 Length = 2555 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 tcccgtcgcgccctccgcctccgcc 117 ||||| ||||||||||||||||||| Sbjct: 6 tcccgccgcgccctccgcctccgcc 30
>gb|BC047578.1| Homo sapiens SEC14 and spectrin domains 1, mRNA (cDNA clone MGC:48388 IMAGE:4815542), complete cds Length = 3001 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 tcccgtcgcgccctccgcctccgcc 117 ||||| ||||||||||||||||||| Sbjct: 177 tcccgccgcgccctccgcctccgcc 201
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cgcgccctccgcctccgcctc 119 ||||||||||||||||||||| Sbjct: 8759 cgcgccctccgcctccgcctc 8779
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cgcgccctccgcctccgcctc 119 ||||||||||||||||||||| Sbjct: 10515 cgcgccctccgcctccgcctc 10495
>gb|AE011932.1| Xanthomonas axonopodis pv. citri str. 306, section 310 of 469 of the complete genome Length = 12264 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 747 caacaggtggtggaggtaggc 767 ||||||||||||||||||||| Sbjct: 4435 caacaggtggtggaggtaggc 4455
>emb|CR933003.18| Zebrafish DNA sequence from clone DKEY-149P6 in linkage group 5, complete sequence Length = 99011 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 967 atttctgttcaagttaatatg 987 ||||||||||||||||||||| Sbjct: 25238 atttctgttcaagttaatatg 25218
>gb|AF443077.1| HIV-1 isolate 98BWMC13.4 from Botswana, complete genome Length = 9079 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 tccagaaacaggggcttgacc 516 ||||||||||||||||||||| Sbjct: 2881 tccagaaacaggggcttgacc 2901
>ref|XM_811232.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507083.10) partial mRNA Length = 2001 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cctccgcctccgcctcgtcct 124 ||||||||||||||||||||| Sbjct: 1885 cctccgcctccgcctcgtcct 1865
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cctccgcctccgcctcgtcct 124 ||||||||||||||||||||| Sbjct: 26224725 cctccgcctccgcctcgtcct 26224745
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 14476372 gcgccatccgcctccgcctcgtcct 14476396
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cgcgccctccgcctccgcctcgtcc 123 |||| |||||||||||||||||||| Sbjct: 24472963 cgcggcctccgcctccgcctcgtcc 24472939 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 30311666 gcgccgtccgcctccgcctcgtcct 30311642
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 4807383 gcgccgtccgcctccgcctcgtcct 4807407
>gb|AY054145.1| Arabidopsis thaliana At1g07080/F10K1_15 mRNA, complete cds Length = 798 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 tactacgagtcgctctgcccctactgctc 229 ||||||||||| ||||| ||||||||||| Sbjct: 130 tactacgagtctctctgtccctactgctc 158
>gb|AY049308.1| Arabidopsis thaliana At1g07080/F10K1_15 mRNA, complete cds Length = 1100 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 tactacgagtcgctctgcccctactgctc 229 ||||||||||| ||||| ||||||||||| Sbjct: 159 tactacgagtctctctgtccctactgctc 187
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cgcgccctccgcctccgcctcgtcc 123 |||| |||||||||||||||||||| Sbjct: 32594 cgcggcctccgcctccgcctcgtcc 32570
>gb|AC093911.2| Homo sapiens BAC clone RP11-765B12 from 2, complete sequence Length = 186199 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 tcccgtcgcgccctccgcctccgcc 117 ||||| ||||||||||||||||||| Sbjct: 128494 tcccgccgcgccctccgcctccgcc 128470
>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111464 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 201 tactacgagtcgctctgcccctactgctc 229 ||||||||||| ||||| ||||||||||| Sbjct: 71362 tactacgagtctctctgtccctactgctc 71334
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 52032 gcgccgtccgcctccgcctcgtcct 52056
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cctccgcctccgcctcgtcct 124 ||||||||||||||||||||| Sbjct: 57650 cctccgcctccgcctcgtcct 57670
>emb|AJ251368.1|HSA251368 Homo sapiens mRNA for for calcium channel, alpha 2/delta subunit 2 (CACNA2D2 gene), splice variant alpha2delta-2b Length = 3453 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 252 cacgccgtcgacctcctgctc 232
>emb|AJ251367.1|HSA251367 Homo sapiens mRNA for for calcium channel, alpha 2/delta subunit 2 (CACNA2D2 gene), splice variant alpha2delta-2a Length = 3432 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 252 cacgccgtcgacctcctgctc 232
>dbj|AK111428.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-H05, full insert sequence Length = 1515 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 452 gcgccatccgcctccgcctcgtcct 476
>emb|BX816741.1|CNS0ABK9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 tactacgagtcgctctgcccctactgctc 229 ||||||||||| ||||| ||||||||||| Sbjct: 134 tactacgagtctctctgtccctactgctc 162
>dbj|AK070248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O06, full insert sequence Length = 2761 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cgcgccctccgcctccgcctc 119 ||||||||||||||||||||| Sbjct: 238 cgcgccctccgcctccgcctc 258
>dbj|AK067375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L22, full insert sequence Length = 2584 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cgcgccctccgcctccgcctc 119 ||||||||||||||||||||| Sbjct: 177 cgcgccctccgcctccgcctc 197
>emb|BX276090.6| Zebrafish DNA sequence from clone RP71-39F17 in linkage group 5, complete sequence Length = 156425 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 967 atttctgttcaagttaatatg 987 ||||||||||||||||||||| Sbjct: 110727 atttctgttcaagttaatatg 110707
>emb|AJ334805.1|HSA334805 Homo sapiens genomic sequence surrounding NotI site, clone NL1-EG14C Length = 607 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 tcccgtcgcgccctccgcctccgcc 117 ||||| ||||||||||||||||||| Sbjct: 393 tcccgccgcgccctccgcctccgcc 369
>gb|AF040709.1|AF040709 Homo sapiens putative tumor suppressor gene 26 protein alpha 2 delta calcium channel subunit mRNA, complete cds Length = 5482 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 432 cacgccgtcgacctcctgctc 412
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 109105 gcgccatccgcctccgcctcgtcct 109129
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cgcgccctccgcctccgcctcgtcc 123 |||| |||||||||||||||||||| Sbjct: 66285 cgcggcctccgcctccgcctcgtcc 66261
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgccctccgcctccgcctcgtcct 124 ||||| ||||||||||||||||||| Sbjct: 61562 gcgccgtccgcctccgcctcgtcct 61538
>emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on chromosome 3, complete sequence Length = 16950 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 15113 cacgccgtcgacctcctgctc 15093
>gb|AF042793.1|AF042793 Homo sapiens alpha 2 delta calcium channel subunit isoform II mRNA, complete cds Length = 5279 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 229 cacgccgtcgacctcctgctc 209
>gb|AF042792.1|AF042792 Homo sapiens alpha 2 delta calcium channel subunit isoform I mRNA, complete cds Length = 5463 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 413 cacgccgtcgacctcctgctc 393
>emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chromosome 4, complete sequence Length = 199130 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 547 agcatggccacaagctttcgctcaa 571 |||||||||||||||||| |||||| Sbjct: 26315 agcatggccacaagctttagctcaa 26339
>dbj|AB011130.1| Homo sapiens mRNA for KIAA0558 protein, partial cds Length = 5303 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cacgccgtcgacctcctgctc 299 ||||||||||||||||||||| Sbjct: 253 cacgccgtcgacctcctgctc 233 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 146,554,743 Number of extensions: 7741955 Number of successful extensions: 149862 Number of sequences better than 10.0: 64 Number of HSP's gapped: 149849 Number of HSP's successfully gapped: 90 Length of query: 1055 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1032 Effective length of database: 18,503,978,556 Effective search space: 19096105869792 Effective search space used: 19096105869792 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)