ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf163k19 |
|---|---|
| Clone Library Name | barley_pub |
>Q9LVJ7:NFYA6_ARATH Nuclear transcription factor Y subunit A-6 - Arabidopsis thaliana| (Mouse-ear cress) Length = 308 Score = 88.6 bits (218), Expect = 7e-17 Identities = 41/70 (58%), Positives = 52/70 (74%) Frame = +3 Query: 663 RLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAMRRA 842 R+ LP N + PI+VNAKQY+ IL K+E +N+L+K RKPYLHESRH HA++R Sbjct: 160 RMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRV 219 Query: 843 RGTGGRFLNT 872 RG+GGRFLNT Sbjct: 220 RGSGGRFLNT 229
>Q93ZH2:NFYA3_ARATH Nuclear transcription factor Y subunit A-3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 340 Score = 87.8 bits (216), Expect = 1e-16 Identities = 41/77 (53%), Positives = 53/77 (68%) Frame = +3 Query: 642 MKSTPGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRH 821 M S GR+ LP T P++VNAKQY I+ K+E +N+L++ RKPYLHESRH Sbjct: 161 MVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRH 220 Query: 822 RHAMRRARGTGGRFLNT 872 HA++R RG+GGRFLNT Sbjct: 221 VHALKRPRGSGGRFLNT 237
>Q9SYH4:NFYA5_ARATH Nuclear transcription factor Y subunit A-5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 308 Score = 87.4 bits (215), Expect = 2e-16 Identities = 42/77 (54%), Positives = 53/77 (68%) Frame = +3 Query: 642 MKSTPGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRH 821 M R+ LP + + PI+VNAKQY IL K+E +N+L+K RKPYLHESRH Sbjct: 160 MMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRH 219 Query: 822 RHAMRRARGTGGRFLNT 872 HA++RARG+GGRFLNT Sbjct: 220 LHALKRARGSGGRFLNT 236
>Q8LFU0:NFYAA_ARATH Nuclear transcription factor Y subunit A-10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 269 Score = 86.7 bits (213), Expect = 3e-16 Identities = 68/207 (32%), Positives = 90/207 (43%), Gaps = 4/207 (1%) Frame = +3 Query: 264 PWWAVSQMLYGDPAAAMSPTPEAEARRDGQFQVVPRA-QGILDPAPQQPAPATRSGAPEV 440 PWW P S + EA G V A QG++D Sbjct: 13 PWW---NAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDK---------------- 53 Query: 441 LKFSVFLGNLESGGNKGEKAL-EHSATIALQSPLPEYNSRFEFXXXXXXXXXXXXXAEQC 617 + S L GG K + + + A+QS FEF EQ Sbjct: 54 -QTSTTLFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQY 106 Query: 618 YGLLTTYAMKSTPGGRLLLPLNATA--DAPIYVNAKQYEGILXXXXXXXKVERENQLVKG 791 YG+++ Y + + GR+++PL D IYVN+KQY GI+ K E+ L + Sbjct: 107 YGVVSAYGSQRS-SGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAEK---LSRC 162 Query: 792 RKPYLHESRHRHAMRRARGTGGRFLNT 872 RKPY+H SRH HAMRR RG+GGRFLNT Sbjct: 163 RKPYMHHSRHLHAMRRPRGSGGRFLNT 189
>Q9LXV5:NFYA1_ARATH Nuclear transcription factor Y subunit A-1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 272 Score = 85.9 bits (211), Expect = 5e-16 Identities = 42/70 (60%), Positives = 50/70 (71%) Frame = +3 Query: 654 PGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAM 833 P R LPL+ A P+YVNAKQYEGIL K E E ++++ RKPYLHESRH+HAM Sbjct: 159 PRERTALPLDM-AQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAM 217 Query: 834 RRARGTGGRF 863 RRAR +GGRF Sbjct: 218 RRARASGGRF 227
>Q9LNP6:NFYA8_ARATH Nuclear transcription factor Y subunit A-8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 328 Score = 84.3 bits (207), Expect = 1e-15 Identities = 37/70 (52%), Positives = 51/70 (72%) Frame = +3 Query: 663 RLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAMRRA 842 R+ LP + + P++VNAKQ+ I+ K+E +N+L+K RKPYLHESRH HA++R Sbjct: 161 RVPLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRP 220 Query: 843 RGTGGRFLNT 872 RG+GGRFLNT Sbjct: 221 RGSGGRFLNT 230
>Q945M9:NFYA9_ARATH Nuclear transcription factor Y subunit A-9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 303 Score = 83.2 bits (204), Expect = 3e-15 Identities = 41/70 (58%), Positives = 48/70 (68%) Frame = +3 Query: 654 PGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAM 833 P R+ LP A P++VNAKQY+ IL K E E +L+K RKPYLHESRH+HAM Sbjct: 153 PHSRMPLPPEM-AQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAM 211 Query: 834 RRARGTGGRF 863 RR RGTGGRF Sbjct: 212 RRPRGTGGRF 221
>Q9M9X4:NFYA2_ARATH Nuclear transcription factor Y subunit A-2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 295 Score = 82.8 bits (203), Expect = 4e-15 Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 5/127 (3%) Frame = +3 Query: 507 HSATIALQSPLPEYNSRFEFXXXXXXXXXXXXXAEQCYGLLTTYAMKSTPGGRLLLPLNA 686 H AT ++QSP E +Q YG+++ Y +S R++LPLN Sbjct: 81 HGATFSMQSPCLELG-----FSQPPIYTKYPYGEQQYYGVVSAYGSQS----RVMLPLNM 131 Query: 687 -TADAPIYVNAKQYEGILXXXXXXXK----VERENQLVKGRKPYLHESRHRHAMRRARGT 851 T D+ IYVN+KQY GI+ K ++++ + RKPY+H SRH HA+RR RG+ Sbjct: 132 ETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGS 191 Query: 852 GGRFLNT 872 GGRFLNT Sbjct: 192 GGRFLNT 198
>Q84JP1:NFYA7_ARATH Nuclear transcription factor Y subunit A-7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 190 Score = 81.6 bits (200), Expect = 9e-15 Identities = 38/66 (57%), Positives = 49/66 (74%) Frame = +3 Query: 672 LPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAMRRARGT 851 LP +A + P++VNAKQY GIL ++E +N+++K RKPYLHESRH HA+RR RG Sbjct: 93 LPSDAVEE-PVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGC 151 Query: 852 GGRFLN 869 GGRFLN Sbjct: 152 GGRFLN 157
>Q8VY64:NFYA4_ARATH Nuclear transcription factor Y subunit A-4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 198 Score = 79.7 bits (195), Expect = 3e-14 Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Frame = +3 Query: 672 LPLNATA-DAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAMRRARG 848 +PL A + P++VNAKQY GIL K+E N+ +K +KPY+HESRH HA+RR RG Sbjct: 89 VPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRG 148 Query: 849 TGGRFLN 869 GGRFLN Sbjct: 149 CGGRFLN 155
>P06774:HAP2_YEAST Transcriptional activator HAP2 - Saccharomyces cerevisiae (Baker's| yeast) Length = 265 Score = 75.1 bits (183), Expect = 8e-13 Identities = 36/61 (59%), Positives = 43/61 (70%) Frame = +3 Query: 684 ATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAMRRARGTGGRF 863 A A+ P YVNAKQY IL K+E + ++ + RKPYLHESRH+HAMRR RG GGRF Sbjct: 155 AIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRF 214 Query: 864 L 866 L Sbjct: 215 L 215
>P18576:NFYA_RAT Nuclear transcription factor Y subunit alpha - Rattus norvegicus| (Rat) Length = 341 Score = 71.2 bits (173), Expect = 1e-11 Identities = 36/72 (50%), Positives = 44/72 (61%) Frame = +3 Query: 654 PGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAM 833 PG +L + P+YVNAKQY IL K+E E ++ K R+ YLHESRHRHAM Sbjct: 249 PGAEML------EEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 302 Query: 834 RRARGTGGRFLN 869 R RG GGRF + Sbjct: 303 ARKRGEGGRFFS 314
>P23708:NFYA_MOUSE Nuclear transcription factor Y subunit alpha - Mus musculus (Mouse)| Length = 346 Score = 71.2 bits (173), Expect = 1e-11 Identities = 36/72 (50%), Positives = 44/72 (61%) Frame = +3 Query: 654 PGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAM 833 PG +L + P+YVNAKQY IL K+E E ++ K R+ YLHESRHRHAM Sbjct: 254 PGAEML------EEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 307 Query: 834 RRARGTGGRFLN 869 R RG GGRF + Sbjct: 308 ARKRGEGGRFFS 319
>P23511:NFYA_HUMAN Nuclear transcription factor Y subunit alpha - Homo sapiens (Human)| Length = 347 Score = 71.2 bits (173), Expect = 1e-11 Identities = 36/72 (50%), Positives = 44/72 (61%) Frame = +3 Query: 654 PGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAM 833 PG +L + P+YVNAKQY IL K+E E ++ K R+ YLHESRHRHAM Sbjct: 255 PGAEML------EEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 308 Query: 834 RRARGTGGRFLN 869 R RG GGRF + Sbjct: 309 ARKRGEGGRFFS 320
>Q5E9S2:NFYA_BOVIN Nuclear transcription factor Y subunit alpha - Bos taurus (Bovine)| Length = 341 Score = 71.2 bits (173), Expect = 1e-11 Identities = 36/72 (50%), Positives = 44/72 (61%) Frame = +3 Query: 654 PGGRLLLPLNATADAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAM 833 PG +L + P+YVNAKQY IL K+E E ++ K R+ YLHESRHRHAM Sbjct: 249 PGAEML------EEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 302 Query: 834 RRARGTGGRFLN 869 R RG GGRF + Sbjct: 303 ARKRGEGGRFFS 314
>P53768:HAP2_KLULA Transcriptional activator HAP2 - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 300 Score = 70.9 bits (172), Expect = 2e-11 Identities = 33/58 (56%), Positives = 40/58 (68%) Frame = +3 Query: 693 DAPIYVNAKQYEGILXXXXXXXKVERENQLVKGRKPYLHESRHRHAMRRARGTGGRFL 866 + P YVNAKQY IL K+E ++ + R+PYLHESRH+HAMRR RG GGRFL Sbjct: 184 EQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFL 241
>P24488:HAP2_SCHPO Transcriptional activator hap2 - Schizosaccharomyces pombe (Fission| yeast) Length = 334 Score = 64.3 bits (155), Expect = 1e-09 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%) Frame = +3 Query: 702 IYVNAKQYEGILXXXXXXXKVERENQLVKG-RKPYLHESRHRHAMRRARGTGGRFL 866 +YVNAKQY IL K+E + V+ +KPYLHESRH+HAMRR RG GGRFL Sbjct: 10 LYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFL 65 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 276,517,033 Number of extensions: 6336253 Number of successful extensions: 18715 Number of sequences better than 10.0: 17 Number of HSP's gapped: 18670 Number of HSP's successfully gapped: 17 Length of query: 574 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 455 Effective length of database: 68,045,334 Effective search space: 30960626970 Effective search space used: 30960626970 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
