ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf131h20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064128:Os11g0544600 386 e-107
2Os04g0543500:Os04g0543500 32 1.8
3AK099754:Os03g0350100 32 1.8
4AK072142:Os04g0467100 30 5.2
5AK110228: 30 5.3
6AY644645:Os08g0192900 29 8.9
7AK103422:Os08g0192900 29 8.9

>AK064128:Os11g0544600 |
          Length = 471
 Score =  386 bits (992), Expect = e-107
 Identities = 226/403 (56%), Positives = 264/403 (65%), Gaps = 9/403 (2%)
 Frame = +3

Query: 123  RARVPFFKKQADSLTLEGVRRTLEKDMDLKINSLDPHKKFIKQCVDKVFSGCDNESTDN- 299
            RAR+P F+KQADSLTLEGVRR LEKDM L+ +SLD HKKFIKQCVDKVFSG D+++T+N 
Sbjct: 23   RARLPDFRKQADSLTLEGVRRALEKDMGLEKHSLDAHKKFIKQCVDKVFSGSDDDNTNNN 82

Query: 300  ASERAEAKVDNLS----EDAQPMFGSNTISSSSDEQGARSTETNKDPEGAKNHSSGIDIT 467
            A E+ EAK D  S    EDAQP   SN ISS++DE  A+S+ET++D EG K+HSSG DI+
Sbjct: 83   APEKDEAKDDRSSKEESEDAQPTSDSNKISSNADEPVAKSSETDRDQEGDKDHSSGSDIS 142

Query: 468  EAMIMKAIDKRASYFRENSETLTLLGVRRTXXXXXXXXXXXXXXFKGYITKELDRVLQEP 647
            EA I  AI KRASYFRENSET+TL GVRRT              +K +I+ ELD +LQEP
Sbjct: 143  EATIKNAIVKRASYFRENSETITLQGVRRTLEEDLKLQKKALDAYKSFISTELDNILQEP 202

Query: 648  ENGMADHSKQEACKDAGQKTSKGSKRARQDSDTFELNNSHSEREDSDEDIXXXXXXXXXX 827
             NG    SK E+ KD+GQKTSK SKRARQDSDT E+N+SH ER DSDED           
Sbjct: 203  ANGTKKTSKTESHKDSGQKTSKNSKRARQDSDTSEINDSHCERGDSDEDARPKKKKAEKG 262

Query: 828  XXXXXXXXVTAGKKLSTLKVEKVAKRDLDKSDKDQGRNSAEDNPLSSA-VDNKK---AAP 995
                     T  K+LS  K +KVAK+DLDKS +  G  S EDN  SSA  DNKK    AP
Sbjct: 263  KAVKRQKKTTVEKQLSNSKAKKVAKKDLDKSKERSG--SEEDNSNSSAEEDNKKKRQVAP 320

Query: 996  AHGKRVERLKSVIKSCGMSVPPSVYRRAKQAPESKREACXXXXXXXXXXXXXXSSHPSXX 1175
            A+GKRVERLKS+IKSCGMS+ P+VYR+AK APESKREAC              S++PS  
Sbjct: 321  AYGKRVERLKSIIKSCGMSIAPTVYRKAKMAPESKREACLIKELEDILEKEGLSTNPSEK 380

Query: 1176 XXXXXXXXXXXXXDLEGIDMSNIITXXXXXXXXXFIPLAVPKI 1304
                         +LEGIDMSNIIT         FIPL  PKI
Sbjct: 381  EIKAVKKRKERAKELEGIDMSNIITSSRRRSTSNFIPLPTPKI 423



 Score = 38.1 bits (87), Expect = 0.019
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
 Frame = +3

Query: 423 DPEGAKNHSSGIDITEAMIMKAIDKRASYFRENSETLTLLGVRRTXXXXXXXXXXXXXXF 602
           +P+ A   ++G    EA I KA   R   FR+ +++LTL GVRR                
Sbjct: 2   EPDAAAAAAAGE--REAEIEKAFRARLPDFRKQADSLTLEGVRRALEKDMGLEKHSLDAH 59

Query: 603 KGYITKELDRVLQEPENGMADHS---KQEACKDAGQKTSKGSKRARQDSDTFELNNSHSE 773
           K +I + +D+V    ++   +++   K EA  D   K      +   DS+    N     
Sbjct: 60  KKFIKQCVDKVFSGSDDDNTNNNAPEKDEAKDDRSSKEESEDAQPTSDSNKISSNADEPV 119

Query: 774 REDSDED 794
            + S+ D
Sbjct: 120 AKSSETD 126



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>Os04g0543500:Os04g0543500 |
          Length = 260

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/61 (21%), Positives = 29/61 (47%)
 Frame = +3

Query: 150 QADSLTLEGVRRTLEKDMDLKINSLDPHKKFIKQCVDKVFSGCDNESTDNASERAEAKVD 329
           +A+   +E  R+T +  M++ +  LD  ++ ++  VD++    D  S D         +D
Sbjct: 162 RAEQRRMEAARKTQQMRMEMALRHLDSQRRLMEALVDRIIDSLDQFSADEGKCHLSRMLD 221

Query: 330 N 332
           +
Sbjct: 222 H 222



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>AK099754:Os03g0350100 |
          Length = 568

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
 Frame = +3

Query: 639  QEPENGMADHSKQEACKDAGQKTSKGSK-RARQDSDTFELNNSHSEREDSDEDIXXXXXX 815
            QE E   A+ + QE     GQK  K  K +  +DS   + +    +++ S E        
Sbjct: 465  QEAEPAGAEETIQEDGDQEGQKKKKKKKSKDSEDSPVADADGGKKKKKKSKE-------- 516

Query: 816  XXXXXXXXXXXXVTAGKKLSTLKVEKVAKRDLDKSDKDQGRNSAEDNPLSSAVDNKKAAP 995
                         +    ++T + EK  K+   KSD    ++ A +   S   D KK   
Sbjct: 517  -------------SEEPPVATAEGEKKEKKKKKKSDSQDAKDVAMETEASGKKDKKKKKK 563

Query: 996  AHG 1004
             HG
Sbjct: 564  KHG 566



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>AK072142:Os04g0467100 |
          Length = 663

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
 Frame = +3

Query: 255 VDKVFSGCDNESTDNASERAEAKVDNLSEDAQ--------PMFGSNTISSSSDEQGARST 410
           +D V           + E+ EA+ D++  D +        P+  S+++S   D +   ST
Sbjct: 357 LDSVVENSSMTDVQASEEKDEARSDDILSDERKIPVDQRSPVENSDSLSDPVD-RALSST 415

Query: 411 ETNKDPEGAKNHSSGIDITEA 473
           ET    +GA+N  S +D TEA
Sbjct: 416 ET----DGARNEDSRLDSTEA 432



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>AK110228: |
          Length = 1551

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 1   DHRKKSSLLPVTITTTVAWRRTAPPPLRLQGE 96
           D RKKS + PV +   VA    A PP R Q +
Sbjct: 545 DARKKSKVAPVVVPAAVAAEEDARPPTRAQSQ 576



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>AY644645:Os08g0192900 |
          Length = 572

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +3

Query: 294 DNASERAEAKVDNLSEDAQPMFGSNTISSSSDEQGARSTETNKD 425
           D++++ +E++ D+  EDA P  G+    SSSDE+   S E++ D
Sbjct: 206 DDSTDGSESESDSEDEDAAPK-GAAKKESSSDEEDDSSEESSDD 248



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>AK103422:Os08g0192900 |
          Length = 572

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +3

Query: 294 DNASERAEAKVDNLSEDAQPMFGSNTISSSSDEQGARSTETNKD 425
           D++++ +E++ D+  EDA P  G+    SSSDE+   S E++ D
Sbjct: 206 DDSTDGSESESDSEDEDAAPK-GAAKKESSSDEEDDSSEESSDD 248


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 39,183,981
Number of extensions: 773149
Number of successful extensions: 2387
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2380
Number of HSP's successfully gapped: 8
Length of query: 571
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 465
Effective length of database: 11,155,509
Effective search space: 5187311685
Effective search space used: 5187311685
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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