| Clone Name | FLbaf127g11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106480.1| Zea mays PCO142465 mRNA sequence Length = 1041 Score = 339 bits (171), Expect = 1e-89 Identities = 324/375 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| |||||||||| |||||||||||||| ||||| | || ||||| | |||| Sbjct: 490 gagaaggtttcagattcttcgtcgaaaccacctgtgcatatggtgggtaggcctaatgtt 549 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaagcaatt 607 || |||||| | ||||||| ||||| || || ||||| ||||| ||||||||||| ||| Sbjct: 550 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaagccatt 609 Query: 608 ggaggtccaacaggagaactccttgaaactaatgcccaggttttaagtcaaatttcaaca 667 ||||||||||| || ||| | ||||||||||||||||| ||||| |||||||||| || Sbjct: 610 ggaggtccaacgggtgaaatacttgaaactaatgcccatgttttgggtcaaatttcgtca 669 Query: 668 aaccttggcaccatgcagatacaggataacatctctctgctgtgccaaactcgagataac 727 |||||| ||| ||||||||||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 670 aaccttagcaacatgcagatacaggacaatatctctctgctctgccaaactcgcgataat 729 Query: 728 atactcagggtgttgaaagagatgaatgatgccccagagatcatgaagcagatgccacca 787 ||||||||||| ||||||||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 730 atactcagggtcttgaaagagataaacgatgctccagatatcatgaagcagatgcccccg 789 Query: 788 ctacccgtgaagataaacgaggagcttgtgaactccatactccccaggccaactgtacct 847 ||||| |||||||||||||||||||| || ||||| | ||||| || |||||||||||| Sbjct: 790 ctacctgtgaagataaacgaggagctcgtcaactcgttgctccctagaccaactgtacct 849 Query: 848 atgcagtagtgatag 862 ||||||||||||||| Sbjct: 850 atgcagtagtgatag 864 Score = 174 bits (88), Expect = 4e-40 Identities = 175/204 (85%) Strand = Plus / Plus Query: 219 aaccctagccccggaggcacggcggcggcgctccggcacgacccgggcctgtcgcgggag 278 ||||||||| ||| ||||||| |||||| || ||||||||||| || ||| |||||||| Sbjct: 220 aaccctagcaacggcggcacgggggcggctcttcggcacgaccctggtctggcgcgggag 279 Query: 279 tggacgccggaggagcaggccatcctcgacgagctgctcgtcaagtatgcatctgatgcg 338 ||| || ||||||||||| ||||||||||||||||||| |||||||||||||| ||| Sbjct: 280 tggtcgacggaggagcagaccatcctcgacgagctgctggtcaagtatgcatccgattta 339 Query: 339 cctgttattcggtatgcaaaaatagccatgaagttaccagagaaaacagttcgagatgtg 398 || ||| |||| ||||||||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 340 cccgttgttcgttatgcaaaagttgcaatgaagttgccagagaaaacagttcgggatgta 399 Query: 399 gctttgcggtgtagatggatgaat 422 || ||||| || |||||||||||| Sbjct: 400 gccttgcgctgcagatggatgaat 423 Score = 46.1 bits (23), Expect = 0.27 Identities = 52/61 (85%), Gaps = 3/61 (4%) Strand = Plus / Plus Query: 107 catgggcgccaacgggcacccgccgcccgccagcgccgccgcccagaacgggtcccactc 166 ||||||||||||||| ||||||||| || ||| ||| ||| |||||||| |||||||| Sbjct: 132 catgggcgccaacggacacccgccg---gcgagcaccgtcgcgcagaacggatcccactc 188 Query: 167 t 167 | Sbjct: 189 t 189
>emb|CR855196.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159F11, complete sequence Length = 73831 Score = 151 bits (76), Expect = 6e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 752 aatgatgccccagagatcatgaagcagatgccaccactacccgtgaagataaacgaggag 811 |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 47309 aatgatgctccagatatcatgaagcagatgccaccgctaccagtgaagataaacgaggag 47250 Query: 812 cttgtgaactccatactccccaggccaactgtacctatgcagtagtga 859 || || ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 47249 ctagtcaactcaatgctccccaggccaactgtacctatgcagtagtga 47202 Score = 145 bits (73), Expect = 4e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 217 caaaccctagccccggaggcacggcggcggcgctccggcacgacccgggcctgtcgcggg 276 |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 50545 caaaccctagccccggcggcacggtggcggcgctccggcacgaccccggcctggcgcggg 50486 Query: 277 agtggacgccggaggagcaggccatcctcgacgagctgctcgtcaagta 325 ||||| ||||||| |||||| ||| |||||||||| ||||||||||||| Sbjct: 50485 agtggtcgccggaagagcagtccaccctcgacgagttgctcgtcaagta 50437 Score = 133 bits (67), Expect = 1e-27 Identities = 103/115 (89%) Strand = Plus / Minus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| |||||||||| | |||||||||||||||||||||||||||||| | |||| Sbjct: 48436 gagaaggtttcagattcttcgttgaaaccacctgttcatatagctggaaggcctaatgtt 48377 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || || ||| |||||||||| ||||||||||| ||||| |||||||| ||||||| Sbjct: 48376 cctccgtacccccttccagctcttcccattgacgatgatgaaatttcttccaaag 48322 Score = 127 bits (64), Expect = 9e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 323 gtatgcatctgatgcgcctgttattcggtatgcaaaaatagccatgaagttaccagagaa 382 ||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 49937 gtatgcatctgatgctcctgtaattcgttatgcaaagatagccatgaagttgccagacaa 49878 Query: 383 aacagttcgagatgtggctttgcggtgtagatggatgaat 422 |||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 49877 aacagttcgagacgtggccttgcgttgtagatggatgaat 49838 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 601 agcaattggaggtccaacaggagaactccttgaaactaatgcccaggttttaagtcaaat 660 ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| Sbjct: 48075 agcaattggaggtccaacaggagaaatccttgaaactaatgcccaagttttgagtcaaat 48016 Query: 661 ttcaacaaaccttggcaccatgcag 685 |||||| ||||| |||| |||||| Sbjct: 48015 ttcaaccaacctcagcactatgcag 47991 Score = 95.6 bits (48), Expect = 3e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 681 tgcagatacaggataacatctctctgctgtgccaaactcgagataacatactcagggtgt 740 ||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||| | Sbjct: 47847 tgcagatacaggataacatctctctactgtgccaaactagagacaatatactcagggtct 47788 Query: 741 tgaaagag 748 |||||||| Sbjct: 47787 tgaaagag 47780 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 105 ggcatgggcgccaacgggcacccgccgcccgccagcgccgccgcccagaacgggtccca 163 ||||||||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 50648 ggcatgggcgcgaacggccacccgccgccggcgagcgccgccgcgcagaacgggtccca 50590 Score = 46.1 bits (23), Expect = 0.27 Identities = 41/47 (87%) Strand = Plus / Minus Query: 995 tgttgatcttccaactgttactcaaatcaggcggttggaacatgtac 1041 |||||| |||||||| ||| |||||||| |||||||||||||||| Sbjct: 47037 tgttgaccttccaaccgttctccaaatcagccggttggaacatgtac 46991
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 151 bits (76), Expect = 6e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 752 aatgatgccccagagatcatgaagcagatgccaccactacccgtgaagataaacgaggag 811 |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 24751346 aatgatgctccagatatcatgaagcagatgccaccgctaccagtgaagataaacgaggag 24751287 Query: 812 cttgtgaactccatactccccaggccaactgtacctatgcagtagtga 859 || || ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 24751286 ctagtcaactcaatgctccccaggccaactgtacctatgcagtagtga 24751239 Score = 145 bits (73), Expect = 4e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 217 caaaccctagccccggaggcacggcggcggcgctccggcacgacccgggcctgtcgcggg 276 |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 24754582 caaaccctagccccggcggcacggtggcggcgctccggcacgaccccggcctggcgcggg 24754523 Query: 277 agtggacgccggaggagcaggccatcctcgacgagctgctcgtcaagta 325 ||||| ||||||| |||||| ||| |||||||||| ||||||||||||| Sbjct: 24754522 agtggtcgccggaagagcagtccaccctcgacgagttgctcgtcaagta 24754474 Score = 127 bits (64), Expect = 9e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 323 gtatgcatctgatgcgcctgttattcggtatgcaaaaatagccatgaagttaccagagaa 382 ||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 24753974 gtatgcatctgatgctcctgtaattcgttatgcaaagatagccatgaagttgccagacaa 24753915 Query: 383 aacagttcgagatgtggctttgcggtgtagatggatgaat 422 |||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 24753914 aacagttcgagacgtggccttgcgttgtagatggatgaat 24753875 Score = 125 bits (63), Expect = 4e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| |||||||||| | |||||||||||||||||||||||||||||| | |||| Sbjct: 24752473 gagaaggtttcagattcttcgttgaaaccacctgttcatatagctggaaggcctaatgtt 24752414 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || || ||| |||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 24752413 cctccgtacccccttccagctctgcccattgacgatgatgaaatttcttccaaag 24752359 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 601 agcaattggaggtccaacaggagaactccttgaaactaatgcccaggttttaagtcaaat 660 ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| Sbjct: 24752112 agcaattggaggtccaacaggagaaatccttgaaactaatgcccaagttttgagtcaaat 24752053 Query: 661 ttcaacaaaccttggcaccatgcag 685 |||||| ||||| |||| |||||| Sbjct: 24752052 ttcaaccaacctcagcactatgcag 24752028 Score = 95.6 bits (48), Expect = 3e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 681 tgcagatacaggataacatctctctgctgtgccaaactcgagataacatactcagggtgt 740 ||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||| | Sbjct: 24751884 tgcagatacaggataacatctctctactgtgccaaactagagacaatatactcagggtct 24751825 Query: 741 tgaaagag 748 |||||||| Sbjct: 24751824 tgaaagag 24751817 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 105 ggcatgggcgccaacgggcacccgccgcccgccagcgccgccgcccagaacgggtccca 163 ||||||||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 24754685 ggcatgggcgcgaacggccacccgccgccggcgagcgccgccgcgcagaacgggtccca 24754627 Score = 46.1 bits (23), Expect = 0.27 Identities = 41/47 (87%) Strand = Plus / Minus Query: 995 tgttgatcttccaactgttactcaaatcaggcggttggaacatgtac 1041 |||||| |||||||| ||| |||||||| |||||||||||||||| Sbjct: 24751074 tgttgaccttccaaccgttctccaaatcagccggttggaacatgtac 24751028
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 151 bits (76), Expect = 6e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 752 aatgatgccccagagatcatgaagcagatgccaccactacccgtgaagataaacgaggag 811 |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 13062 aatgatgctccagatatcatgaagcagatgccaccgctaccagtgaagataaacgaggag 13003 Query: 812 cttgtgaactccatactccccaggccaactgtacctatgcagtagtga 859 || || ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 13002 ctagtcaactcaatgctccccaggccaactgtacctatgcagtagtga 12955 Score = 145 bits (73), Expect = 4e-31 Identities = 100/109 (91%) Strand = Plus / Minus Query: 217 caaaccctagccccggaggcacggcggcggcgctccggcacgacccgggcctgtcgcggg 276 |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 16298 caaaccctagccccggcggcacggtggcggcgctccggcacgaccccggcctggcgcggg 16239 Query: 277 agtggacgccggaggagcaggccatcctcgacgagctgctcgtcaagta 325 ||||| ||||||| |||||| ||| |||||||||| ||||||||||||| Sbjct: 16238 agtggtcgccggaagagcagtccaccctcgacgagttgctcgtcaagta 16190 Score = 127 bits (64), Expect = 9e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 323 gtatgcatctgatgcgcctgttattcggtatgcaaaaatagccatgaagttaccagagaa 382 ||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 15690 gtatgcatctgatgctcctgtaattcgttatgcaaagatagccatgaagttgccagacaa 15631 Query: 383 aacagttcgagatgtggctttgcggtgtagatggatgaat 422 |||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 15630 aacagttcgagacgtggccttgcgttgtagatggatgaat 15591 Score = 125 bits (63), Expect = 4e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| |||||||||| | |||||||||||||||||||||||||||||| | |||| Sbjct: 14189 gagaaggtttcagattcttcgttgaaaccacctgttcatatagctggaaggcctaatgtt 14130 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || || ||| |||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 14129 cctccgtacccccttccagctctgcccattgacgatgatgaaatttcttccaaag 14075 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 601 agcaattggaggtccaacaggagaactccttgaaactaatgcccaggttttaagtcaaat 660 ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| Sbjct: 13828 agcaattggaggtccaacaggagaaatccttgaaactaatgcccaagttttgagtcaaat 13769 Query: 661 ttcaacaaaccttggcaccatgcag 685 |||||| ||||| |||| |||||| Sbjct: 13768 ttcaaccaacctcagcactatgcag 13744 Score = 95.6 bits (48), Expect = 3e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 681 tgcagatacaggataacatctctctgctgtgccaaactcgagataacatactcagggtgt 740 ||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||| | Sbjct: 13600 tgcagatacaggataacatctctctactgtgccaaactagagacaatatactcagggtct 13541 Query: 741 tgaaagag 748 |||||||| Sbjct: 13540 tgaaagag 13533 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 105 ggcatgggcgccaacgggcacccgccgcccgccagcgccgccgcccagaacgggtccca 163 ||||||||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 16401 ggcatgggcgcgaacggccacccgccgccggcgagcgccgccgcgcagaacgggtccca 16343 Score = 46.1 bits (23), Expect = 0.27 Identities = 41/47 (87%) Strand = Plus / Minus Query: 995 tgttgatcttccaactgttactcaaatcaggcggttggaacatgtac 1041 |||||| |||||||| ||| |||||||| |||||||||||||||| Sbjct: 12790 tgttgaccttccaaccgttctccaaatcagccggttggaacatgtac 12744
>ref|NM_001059730.1| Oryza sativa (japonica cultivar-group) Os04g0495700 (Os04g0495700) mRNA, partial cds Length = 511 Score = 145 bits (73), Expect = 4e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 217 caaaccctagccccggaggcacggcggcggcgctccggcacgacccgggcctgtcgcggg 276 |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 190 caaaccctagccccggcggcacggtggcggcgctccggcacgaccccggcctggcgcggg 249 Query: 277 agtggacgccggaggagcaggccatcctcgacgagctgctcgtcaagta 325 ||||| ||||||| |||||| ||| |||||||||| ||||||||||||| Sbjct: 250 agtggtcgccggaagagcagtccaccctcgacgagttgctcgtcaagta 298 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 105 ggcatgggcgccaacgggcacccgccgcccgccagcgccgccgcccagaacgggtccca 163 ||||||||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 87 ggcatgggcgcgaacggccacccgccgccggcgagcgccgccgcgcagaacgggtccca 145
>dbj|AK062826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-F09, full insert sequence Length = 511 Score = 145 bits (73), Expect = 4e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 217 caaaccctagccccggaggcacggcggcggcgctccggcacgacccgggcctgtcgcggg 276 |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 190 caaaccctagccccggcggcacggtggcggcgctccggcacgaccccggcctggcgcggg 249 Query: 277 agtggacgccggaggagcaggccatcctcgacgagctgctcgtcaagta 325 ||||| ||||||| |||||| ||| |||||||||| ||||||||||||| Sbjct: 250 agtggtcgccggaagagcagtccaccctcgacgagttgctcgtcaagta 298 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 105 ggcatgggcgccaacgggcacccgccgcccgccagcgccgccgcccagaacgggtccca 163 ||||||||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 87 ggcatgggcgcgaacggccacccgccgccggcgagcgccgccgcgcagaacgggtccca 145
>gb|AY503092.1| Sorghum bicolor clone 1104-SC0706 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503080.1| Sorghum bicolor clone 1104-514605 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503079.1| Sorghum bicolor clone 1104-51030 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503078.1| Sorghum bicolor clone 1104-50875 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503077.1| Sorghum bicolor clone 1104-267380 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503076.1| Sorghum bicolor clone 1104-257595 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503073.1| Sorghum arundinaceum clone 1104-225905 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503071.1| Sorghum bicolor clone 1104-152702 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503069.1| Sorghum bicolor clone 1104-RTx430 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503068.1| Sorghum bicolor clone 1104-BTx3197 RFLP probe pSB1104 Length = 267 Score = 101 bits (51), Expect = 5e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY111981.1| Zea mays CL20495_1 mRNA sequence Length = 665 Score = 97.6 bits (49), Expect = 8e-17 Identities = 92/108 (85%) Strand = Plus / Plus Query: 755 gatgccccagagatcatgaagcagatgccaccactacccgtgaagataaacgaggagctt 814 ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 287 gatgctccagatatcatgaagcagatgnnnnngctacctgtgaagataaacgaggagctc 346 Query: 815 gtgaactccatactccccaggccaactgtacctatgcagtagtgatag 862 || ||||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 347 gtcaactcgttgctccctagaccaactgtacctatgcagtagtgatag 394
>gb|AY503091.1| Sorghum bicolor clone 1104-SC0599 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503090.1| Sorghum bicolor clone 1104-SC0326 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503089.1| Sorghum bicolor clone 1104-SC0033 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503088.1| Sorghum bicolor clone 1104-BTx406 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503087.1| Sorghum arundinaceum clone 1104-LWA8 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503086.1| Sorghum arundinaceum clone 1104-LWA4 RFLP probe pSB1104 Length = 264 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 1 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 60 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 61 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 115
>gb|AY503085.1| Sorghum bicolor clone 1104-92381 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503084.1| Sorghum bicolor clone 1104-82459 RFLP probe pSB1104 Length = 260 Score = 93.7 bits (47), Expect = 1e-15 Identities = 95/111 (85%) Strand = Plus / Plus Query: 492 aggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgttccgc 551 ||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 1 aggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgttcctc 60 Query: 552 catactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 ||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 61 cataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 111
>gb|AY503083.1| Sorghum bicolor clone 1104-77034 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503081.1| Sorghum bicolor clone 1104-56003 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503075.1| Sorghum bicolor clone 1104-246712 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503074.1| Sorghum bicolor clone 1104-22913 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503072.1| Sorghum bicolor clone 1104-195684 RFLP probe pSB1104 Length = 267 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 488 gagaaggttgcagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgtt 547 ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||| | |||| Sbjct: 4 gagaaggtttcagattcttcatcaaaaccacctgtccatatggctggtaggcctaatgtt 63 Query: 548 ccgccatactcccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 || |||||| | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 64 cctccataccctcttccagttcttccaatggacgatgatgaaatctcatccaaag 118
>gb|AY503082.1| Sorghum bicolor clone 1104-56174 RFLP probe pSB1104 Length = 258 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 498 cagattcttcatcgaaaccacctgttcatatagctggaaggccgagtgttccgccatact 557 ||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| |||||| Sbjct: 5 cagattcttcatcaaaaccacctgtccatatggctggtaggcctagtgttcctccatacc 64 Query: 558 cccttccagcacttcccattgatgatgacgaaatttcatccaaag 602 | ||||||| ||||| || || ||||| ||||| |||||||||| Sbjct: 65 ctcttccagttcttccaatggacgatgatgaaatctcatccaaag 109
>emb|X53515.1|ZMZC1 Maize Zc1 gene for Zein Zc1 (14 kD zein-2) Length = 3864 Score = 87.7 bits (44), Expect = 8e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 685 gatacaggataacatctctctgctgtgccaaactcgagataacatactcagggtgttgaa 744 |||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||| Sbjct: 3087 gatacaggataacatctctctgttgtgccaaactcgagataatatactcagaattttgaa 3028 Query: 745 agag 748 |||| Sbjct: 3027 agag 3024
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Minus Query: 124 acccgccgcccgccagcgccgccgc 148 ||||||||||||||||||||||||| Sbjct: 1815231 acccgccgcccgccagcgccgccgc 1815207
>gb|AC189577.1| Brassica rapa subsp. pekinensis clone KBrH011G10, complete sequence Length = 121301 Score = 50.1 bits (25), Expect = 0.017 Identities = 46/53 (86%) Strand = Plus / Plus Query: 761 ccagagatcatgaagcagatgccaccactacccgtgaagataaacgaggagct 813 |||||| | |||||||||||||||||||| || |||||| | ||||| ||||| Sbjct: 110279 ccagaggttatgaagcagatgccaccacttcctgtgaaggtgaacgaagagct 110331
>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence Length = 181633 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 124 acccgccgcccgccagcgccgccgc 148 ||||||||||||||||||||||||| Sbjct: 181583 acccgccgcccgccagcgccgccgc 181607
>gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete sequence Length = 179374 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Minus Query: 124 acccgccgcccgccagcgccgccgc 148 ||||||||||||||||||||||||| Sbjct: 110065 acccgccgcccgccagcgccgccgc 110041
>ref|XM_421361.2| PREDICTED: Gallus gallus hypothetical LOC423451 (LOC423451), mRNA Length = 3138 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 cccgccgcccgccagcgccgcc 146 |||||||||||||||||||||| Sbjct: 1032 cccgccgcccgccagcgccgcc 1011
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 acccgccgcccgccagcgccgccgcc 149 |||||| ||||||||||||||||||| Sbjct: 168743 acccgcagcccgccagcgccgccgcc 168718
>gb|AC161513.5| Mus musculus chromosome 3, clone RP23-238A12, complete sequence Length = 160438 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 acactcgctcagaagcagcagctcca 64 |||| ||||||||||||||||||||| Sbjct: 158843 acacacgctcagaagcagcagctcca 158818
>dbj|AK147409.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1034L20 product:kinesin family member 1B, full insert sequence Length = 8783 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 3395 gcagcagctccagcttctccag 3374
>ref|NM_207682.2| Mus musculus kinesin family member 1B (Kif1b), transcript variant 2, mRNA Length = 10118 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 4708 gcagcagctccagcttctccag 4687
>gb|AF001171.2| Ralstonia solanacearum protein kinase homolog (pehS), PehR (pehR), and N-acetylmuramyl-L-alanine amidase (ampD) genes, complete cds Length = 4909 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ggcacccgccgcccgccagcgc 142 |||||||||||||||||||||| Sbjct: 174 ggcacccgccgcccgccagcgc 195
>dbj|AP006505.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-266A3, complete sequence Length = 199759 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 49493 gcagcagctccagcttctccag 49472
>dbj|AP006504.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-100M2, complete sequence Length = 209271 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 2800 gcagcagctccagcttctccag 2821
>gb|AF131865.1|AF131865 Mus musculus kif1b major isoform (Kif1b) mRNA, complete cds Length = 5743 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 4799 gcagcagctccagcttctccag 4778
>gb|AC073524.13|AC073524 Homo sapiens X BAC RP11-637N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 58198 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ctcccttccagcacttcccatt 577 |||||||||||||||||||||| Sbjct: 29884 ctcccttccagcacttcccatt 29863
>gb|BC036964.1| Mus musculus kinesin family member 1B, mRNA (cDNA clone IMAGE:4507930), with apparent retained intron Length = 3413 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 553 gcagcagctccagcttctccag 532
>gb|AF090190.1|AF090190 Mus musculus kinesin-like protein KIF1B (Kif1b) mRNA, complete cds Length = 9924 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 4507 gcagcagctccagcttctccag 4486
>gb|AY106335.1| Zea mays PCO141803 mRNA sequence Length = 881 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 121 ggcacccgccgcccgccagcgccgccgccc 150 |||||||||||||| || |||||||||||| Sbjct: 113 ggcacccgccgccctcccgcgccgccgccc 142
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 gcaggccatcctcgacgagctg 314 |||||||||||||||||||||| Sbjct: 1617527 gcaggccatcctcgacgagctg 1617548
>gb|AC115008.7| Mus musculus chromosome 3, clone RP24-189F12, complete sequence Length = 154667 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 acactcgctcagaagcagcagctcca 64 |||| ||||||||||||||||||||| Sbjct: 75651 acacacgctcagaagcagcagctcca 75676
>dbj|AB023656.1| Mus musculus mRNA for KIF1B-beta, complete cds Length = 5739 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 4592 gcagcagctccagcttctccag 4571
>emb|AL731655.8| Mouse DNA sequence from clone RP23-249G3 on chromosome 4, complete sequence Length = 126753 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 gcagcagctccagcttctccag 74 |||||||||||||||||||||| Sbjct: 67922 gcagcagctccagcttctccag 67943
>ref|XM_001234772.1| PREDICTED: Gallus gallus similar to LOC495245 protein (LOC771495), mRNA Length = 1555 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 gccgcccgccagcgccgccgcccag 152 ||||||||||||| ||||||||||| Sbjct: 225 gccgcccgccagcaccgccgcccag 201
>ref|XM_780399.2| PREDICTED: Strongylocentrotus purpuratus similar to SAPS287 (LOC580332), mRNA Length = 3959 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cccgccgcccgccagcgccgc 145 ||||||||||||||||||||| Sbjct: 2024 cccgccgcccgccagcgccgc 2044
>ref|XM_001187660.1| PREDICTED: Strongylocentrotus purpuratus similar to SAPS287 (LOC580332), mRNA Length = 3959 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cccgccgcccgccagcgccgc 145 ||||||||||||||||||||| Sbjct: 2024 cccgccgcccgccagcgccgc 2044
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 17824326 agaagcagcagctccagcttc 17824306
>gb|AC185339.4| Nasonia vitripennis BAC NV_Bb-67B15 (Clemson University Genomics Nasonia vitripennis BAC Library) complete sequence Length = 93092 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cccgccgcccgccagcgccgccgcc 149 |||||||||||||| |||||||||| Sbjct: 65995 cccgccgcccgccaccgccgccgcc 66019
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 gacgccggaggagcaggccat 301 ||||||||||||||||||||| Sbjct: 2430882 gacgccggaggagcaggccat 2430902
>gb|AC129582.10| Mus musculus chromosome 5, clone RP24-485O24, complete sequence Length = 184794 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 732 tcagggtgttgaaagagatga 752 ||||||||||||||||||||| Sbjct: 13862 tcagggtgttgaaagagatga 13842
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 atgatgacgaaatttcatcca 599 ||||||||||||||||||||| Sbjct: 240578 atgatgacgaaatttcatcca 240598
>gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, complete sequence Length = 195433 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 911 agcaaaaacaataagaaaaat 931 ||||||||||||||||||||| Sbjct: 9902 agcaaaaacaataagaaaaat 9882
>gb|AC139568.5| Mus musculus chromosome 12, clone RP23-208G5, complete sequence Length = 202882 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ctcagaagcagcagctccagc 66 ||||||||||||||||||||| Sbjct: 41725 ctcagaagcagcagctccagc 41745
>gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, complete sequence Length = 183819 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 732 tcagggtgttgaaagagatga 752 ||||||||||||||||||||| Sbjct: 13456 tcagggtgttgaaagagatga 13476
>gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, complete sequence Length = 136964 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 911 agcaaaaacaataagaaaaat 931 ||||||||||||||||||||| Sbjct: 19032 agcaaaaacaataagaaaaat 19012
>ref|NM_206775.1| Drosophila melanogaster Shaker CG12348-RG, transcript variant G (Sh), mRNA Length = 2913 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 2287 agaagcagcagctccagcttc 2307
>ref|XM_547094.2| PREDICTED: Canis familiaris similar to ubiquitin specific protease 31 (LOC489974), mRNA Length = 3811 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgcccgccagcgccgccg 147 ||||||||||||||||||||| Sbjct: 41 cgccgcccgccagcgccgccg 61
>ref|NM_167592.2| Drosophila melanogaster Shaker CG12348-RD, transcript variant D (Sh), mRNA Length = 2447 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 1821 agaagcagcagctccagcttc 1841
>gb|AC152061.6| Mus musculus BAC clone RP23-351K4 from chromosome 12, complete sequence Length = 206383 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ctcagaagcagcagctccagc 66 ||||||||||||||||||||| Sbjct: 87500 ctcagaagcagcagctccagc 87480
>ref|NM_078669.3| Drosophila melanogaster Shaker CG12348-RB, transcript variant B (Sh), mRNA Length = 3126 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 2287 agaagcagcagctccagcttc 2307
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 cagcagctccagcttctccag 74 ||||||||||||||||||||| Sbjct: 2194058 cagcagctccagcttctccag 2194078
>gb|AC132872.17| Homo sapiens chromosome 17, clone RP13-516M14, complete sequence Length = 171569 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 agcagctccagcttctccagg 75 ||||||||||||||||||||| Sbjct: 49808 agcagctccagcttctccagg 49788
>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence Length = 200979 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 aacatctctctgctgtgccaa 715 ||||||||||||||||||||| Sbjct: 38669 aacatctctctgctgtgccaa 38649
>gb|AC100775.3| Homo sapiens chromosome 18, clone CTD-2526M8, complete sequence Length = 175268 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 aacatctctctgctgtgccaa 715 ||||||||||||||||||||| Sbjct: 173713 aacatctctctgctgtgccaa 173693
>ref|XM_571827.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNG00890) partial mRNA Length = 5581 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 atgatgacgaaatttcatcca 599 ||||||||||||||||||||| Sbjct: 5110 atgatgacgaaatttcatcca 5090
>gb|AY118398.1| Drosophila melanogaster RE58855 full insert cDNA Length = 2458 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 1821 agaagcagcagctccagcttc 1841
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 796 gaagataaacgaggagcttgtgaac 820 |||||| |||||||||||||||||| Sbjct: 926136 gaagatcaacgaggagcttgtgaac 926160
>emb|AL513547.16| Human DNA sequence from clone RP11-160E12 on chromosome 6 Contains the 5' end of a novel gene, a novel gene, a PHD zinc finger protein XAP135 (XAP135) and three CpG islands, complete sequence Length = 91814 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cccgccgcccgccagcgccgccgcc 149 ||||| ||||||||||||||||||| Sbjct: 91113 cccgcggcccgccagcgccgccgcc 91137
>emb|AL354892.19| Human DNA sequence from clone RP1-266L20 on chromosome 6 Contains two novel genes, the TCTE3 gene for t-complex-associated-testis-expressed 3, the gene for hypothetical protein FLJ11152 (FLJ10507 FLJ11458), a novel gene (FLJ31451), the 5' end of the gene for hypothetical protein FLJ13162 and three CpG islands, complete sequence Length = 79502 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cccgccgcccgccagcgccgccgcc 149 ||||| ||||||||||||||||||| Sbjct: 1299 cccgcggcccgccagcgccgccgcc 1323
>gb|AC012097.8| Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone BACR29H04, complete sequence Length = 155670 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 90141 agaagcagcagctccagcttc 90161
>gb|BC097813.1| Xenopus laevis cDNA clone IMAGE:6871593, partial cds Length = 1681 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 652 aagtcaaatttcaacaaacct 672 ||||||||||||||||||||| Sbjct: 1375 aagtcaaatttcaacaaacct 1395
>emb|X07131.1|DMSHAKE1 D. melanogaster adult Shaker ShA mRNA for put. K(+)-channel Length = 2855 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 2222 agaagcagcagctccagcttc 2242
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 gcggcggcgctccggcacgac 260 ||||||||||||||||||||| Sbjct: 164054 gcggcggcgctccggcacgac 164034
>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone BACR17D02, complete sequence Length = 186748 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 22473 agaagcagcagctccagcttc 22453
>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence Length = 176316 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 910 cagcaaaaacaataagaaaaa 930 ||||||||||||||||||||| Sbjct: 144613 cagcaaaaacaataagaaaaa 144633
>gb|AC132146.3| Homo sapiens BAC clone RP11-1261A10 from 2, complete sequence Length = 106682 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 910 cagcaaaaacaataagaaaaa 930 ||||||||||||||||||||| Sbjct: 25214 cagcaaaaacaataagaaaaa 25234
>dbj|BS000197.1| Pan troglodytes chromosome 22 clone:PTB-108M20, map 22, complete sequences Length = 192863 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 agcagcagctccagcttctcc 72 ||||||||||||||||||||| Sbjct: 41247 agcagcagctccagcttctcc 41227
>gb|AC104261.4| Homo sapiens chromosome 15, clone CTD-2548C12, complete sequence Length = 49457 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 agcagctccagcttctccagg 75 ||||||||||||||||||||| Sbjct: 7794 agcagctccagcttctccagg 7774
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 42.1 bits (21), Expect = 4.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 681 tgcagatacaggataacatctctctgctgtgccaaactcgagataacat 729 ||||||||||||| |||||| ||| | ||||||||| |||||||||| Sbjct: 13291 tgcagatacaggagaacatcaatcttttctgccaaactagagataacat 13243
>gb|AC007628.3|AC007628 Genomic sequence of Homo sapiens clone N0576M10 from chromosome 18, complete sequence Length = 140356 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 aacatctctctgctgtgccaa 715 ||||||||||||||||||||| Sbjct: 33397 aacatctctctgctgtgccaa 33377
>emb|AJ300199.1|MMU300199 Mus musculus Puma-g gene for putative seven transmembrane spanning receptor Length = 7100 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 732 tcagggtgttgaaagagatga 752 ||||||||||||||||||||| Sbjct: 2353 tcagggtgttgaaagagatga 2333
>gb|M17211.1|DROCHAB D.melanogaster potassium channel (Shaker) mRNA, complete cds Length = 2928 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agaagcagcagctccagcttc 69 ||||||||||||||||||||| Sbjct: 2088 agaagcagcagctccagcttc 2108 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 176,757,938 Number of extensions: 10217893 Number of successful extensions: 221063 Number of sequences better than 10.0: 92 Number of HSP's gapped: 221062 Number of HSP's successfully gapped: 117 Length of query: 1103 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1080 Effective length of database: 18,503,978,556 Effective search space: 19984296840480 Effective search space used: 19984296840480 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)