ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf126b14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK067482:Os09g0109500 494 e-140
2AK119856: 32 1.2
3Os10g0427800:Os10g0427800 31 2.0
4AK066202:Os03g0665200 28 9.8

>AK067482:Os09g0109500 |
          Length = 247
 Score =  494 bits (1272), Expect = e-140
 Identities = 236/247 (95%), Positives = 242/247 (97%)
 Frame = +3

Query: 132 MLPTTASKGRGAARSAPPLFGPYLRRIVKWQQMDIEYTFWQMVHLCTSPKVVYQHTKYHK 311
           MLPTTASKGRGAARSAPPLFGPYLRRIVKWQQMDIEYTFWQMVHLCTSPKVVYQHTKYHK
Sbjct: 1   MLPTTASKGRGAARSAPPLFGPYLRRIVKWQQMDIEYTFWQMVHLCTSPKVVYQHTKYHK 60

Query: 312 QTKNQWARDDPAFIVILILFLVFATSAYCAAFGESAPHAALTIISVVFVHFLFAGLVLAT 491
           QTKNQWARDDPAF+VILILFLVFATSAYCAA+GES  HAALTI SVV VHFLFAG+VLAT
Sbjct: 61  QTKNQWARDDPAFVVILILFLVFATSAYCAAYGESPSHAALTITSVVLVHFLFAGIVLAT 120

Query: 492 LCWFLTNSYLREEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVLQYFLSPLLIAHGFL 671
           LCWFLTNSYLREEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVLQYFLSPLL+AHGF 
Sbjct: 121 LCWFLTNSYLREEPNSHVVEQRVEWLYAFDVHCNSFFPAFVILYVLQYFLSPLLVAHGFF 180

Query: 672 PALLSNLLFMVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILVGFNPTRY 851
           PALLSNLLF+VAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMIL+GFNPTRY
Sbjct: 181 PALLSNLLFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRY 240

Query: 852 FLSLYFR 872
           FLSLYFR
Sbjct: 241 FLSLYFR 247



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>AK119856: |
          Length = 782

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/103 (22%), Positives = 34/103 (33%)
 Frame = -1

Query: 777 KMLFGPKMEEHHILGSSDSDNKKLPP*TGGLIIGQARIHVRSTEATKSIEAHIG*RMQGR 598
           K LF P +  H +            P             V   E  ++++AH+  RM   
Sbjct: 514 KRLFKPTIHRHRVAAQQSVQQPSQQP----------SQPVTEAEYLEALQAHVDGRMDAA 563

Query: 597 TSCSEHQMHTATRHAVRPHGY*VPPSDKNW*ETSKVWPKLAQQ 469
              +  Q+H   R A   H   V   D      +K W  L+ Q
Sbjct: 564 DRAAHGQLHAEYRAAAAEHAAAVRDGDARAAAQAKAWAALSAQ 606



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>Os10g0427800:Os10g0427800 |
          Length = 369

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 568 CMHLMFTATRSSLHSSSYMCFNTFCR 645
           C HL+ TA R  LH    MC N  C+
Sbjct: 274 CQHLLVTADRYDLHRLKLMCENRLCK 299



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>AK066202:Os03g0665200 |
          Length = 302

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 193 PKSGGAERAAPRPLDAVVGSIVLPSPSFCCSSAL 92
           P++G  + AA  P  ++  + +L +  FCCSSA+
Sbjct: 56  PQAGFLDGAAEGPSSSMSPTSILETKQFCCSSAM 89


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 33,441,576
Number of extensions: 780495
Number of successful extensions: 1964
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1964
Number of HSP's successfully gapped: 4
Length of query: 398
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 295
Effective length of database: 11,275,632
Effective search space: 3326311440
Effective search space used: 3326311440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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