| Clone Name | FLbaf125p11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 89.7 bits (45), Expect = 3e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 1296 agagtagcatattgtagcatatatgggttgtaaagattataatagaattatttagtggta 1355 ||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| || Sbjct: 230335 agagtagcatattgtagcacatctgtgttgtaaagattgtaatagatttatttagtcata 230276 Query: 1356 tatttgatgaattttacgtgttctt 1380 |||||||| ||||||| ||||||| Sbjct: 230275 tatttgatcaattttatttgttctt 230251 Score = 89.7 bits (45), Expect = 3e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 1296 agagtagcatattgtagcatatatgggttgtaaagattataatagaattatttagtggta 1355 ||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| || Sbjct: 340188 agagtagcatattgtagcacatctgtgttgtaaagattgtaatagatttatttagtcata 340129 Query: 1356 tatttgatgaattttacgtgttctt 1380 |||||||| ||||||| ||||||| Sbjct: 340128 tatttgatcaattttatttgttctt 340104 Score = 46.1 bits (23), Expect = 0.36 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1235 agaagctcaaatgtaaagtctgaagacgtgaagtgtgaa 1273 |||||||||| ||| |||| ||||| ||||||||||||| Sbjct: 230408 agaagctcaagtgtgaagtgtgaagccgtgaagtgtgaa 230370
>gb|AY104344.1| Zea mays PCO082748 mRNA sequence Length = 1812 Score = 63.9 bits (32), Expect = 2e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 1146 ctccatcccaaaatctattgtgcactaccaagtacatgaggcgaagcactcactcctcga 1205 ||||||||||||||||||||| | | |||||| | ||||| |||| ||| || ||||| Sbjct: 1339 ctccatcccaaaatctattgtttattgccaagtgcgagaggccaagcgctcgctgctcga 1398 Query: 1206 ccatttctttactgaactgggagcaacagaga 1237 || ||||| |||||||||||||||| ||||| Sbjct: 1399 tcacttcttcactgaactgggagcaagagaga 1430
>emb|CT832861.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA015E24, full insert sequence Length = 678 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1183 gaggcgaagcactcactcctcgaccatttctttactgaactgggagcaacagaga 1237 ||||| |||| |||||| ||||| || |||||||||||| ||||||||| ||||| Sbjct: 258 gaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagaga 312
>ref|NM_001062813.1| Oryza sativa (japonica cultivar-group) Os05g0556100 (Os05g0556100) mRNA, complete cds Length = 2302 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1183 gaggcgaagcactcactcctcgaccatttctttactgaactgggagcaacagaga 1237 ||||| |||| |||||| ||||| || |||||||||||| ||||||||| ||||| Sbjct: 1832 gaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagaga 1886
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1183 gaggcgaagcactcactcctcgaccatttctttactgaactgggagcaacagaga 1237 ||||| |||| |||||| ||||| || |||||||||||| ||||||||| ||||| Sbjct: 1833 gaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagaga 1887
>ref|NM_001055189.1| Oryza sativa (japonica cultivar-group) Os03g0101500 (Os03g0101500) mRNA, complete cds Length = 1070 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 682 tccaccccatcctcgtctccaccttccaccgctgcctccagaccgatgcccagg 735 |||||| | ||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct: 225 tccaccgcgtcctcgtctcccccttcatccgctgcctccagaccgccgcccagg 278 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 591 tgggaaccgccgctcaccgacgcgggcgtcctc 623 ||||| ||||||||||||||||| ||| ||||| Sbjct: 146 tgggatccgccgctcaccgacgccggcctcctc 178
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1183 gaggcgaagcactcactcctcgaccatttctttactgaactgggagcaacagag 1236 ||||| |||| |||||| ||||| || |||||||||||| ||||||||| |||| Sbjct: 24504 gaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagag 24451
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Minus Query: 682 tccaccccatcctcgtctccaccttccaccgctgcctccagaccgatgcccagg 735 |||||| | ||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct: 34961 tccaccgcgtcctcgtctcccccttcatccgctgcctccagaccgccgcccagg 34908 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 591 tgggaaccgccgctcaccgacgcgggcgtcctc 623 ||||| ||||||||||||||||| ||| ||||| Sbjct: 35040 tgggatccgccgctcaccgacgccggcctcctc 35008
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1183 gaggcgaagcactcactcctcgaccatttctttactgaactgggagcaacagag 1236 ||||| |||| |||||| ||||| || |||||||||||| ||||||||| |||| Sbjct: 27428374 gaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagag 27428321 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctcc 969 |||||||||||||||||||||| Sbjct: 7709999 tcttcttcttctccatctctcc 7709978
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Minus Query: 682 tccaccccatcctcgtctccaccttccaccgctgcctccagaccgatgcccagg 735 |||||| | ||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct: 100961 tccaccgcgtcctcgtctcccccttcatccgctgcctccagaccgccgcccagg 100908 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 591 tgggaaccgccgctcaccgacgcgggcgtcctc 623 ||||| ||||||||||||||||| ||| ||||| Sbjct: 101040 tgggatccgccgctcaccgacgccggcctcctc 101008
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 682 tccaccccatcctcgtctccaccttccaccgctgcctccagaccgatgcccagg 735 |||||| | ||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct: 24257 tccaccgcgtcctcgtctcccccttcatccgctgcctccagaccgccgcccagg 24310 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 591 tgggaaccgccgctcaccgacgcgggcgtcctc 623 ||||| ||||||||||||||||| ||| ||||| Sbjct: 24178 tgggatccgccgctcaccgacgccggcctcctc 24210
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 682 tccaccccatcctcgtctccaccttccaccgctgcctccagaccgatgcccagg 735 |||||| | ||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct: 161607 tccaccgcgtcctcgtctcccccttcatccgctgcctccagaccgccgcccagg 161660 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 591 tgggaaccgccgctcaccgacgcgggcgtcctc 623 ||||| ||||||||||||||||| ||| ||||| Sbjct: 161528 tgggatccgccgctcaccgacgccggcctcctc 161560
>dbj|AK109299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-D09, full insert sequence Length = 1070 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 682 tccaccccatcctcgtctccaccttccaccgctgcctccagaccgatgcccagg 735 |||||| | ||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct: 225 tccaccgcgtcctcgtctcccccttcatccgctgcctccagaccgccgcccagg 278 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 591 tgggaaccgccgctcaccgacgcgggcgtcctc 623 ||||| ||||||||||||||||| ||| ||||| Sbjct: 146 tgggatccgccgctcaccgacgccggcctcctc 178
>ref|NM_001051776.1| Oryza sativa (japonica cultivar-group) Os01g0923700 (Os01g0923700) mRNA, partial cds Length = 4046 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 753 ccatcctcgtctccaccttccacc 776
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Minus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 40401218 ccatcctcgtctccaccttccacc 40401195
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Minus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 110182 ccatcctcgtctccaccttccacc 110159
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Minus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 52459 ccatcctcgtctccaccttccacc 52436
>dbj|AB102956.1| Zea mays ZmHK2 mRNA for histidine kinase 2, complete cds Length = 3609 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 405 ccatcctcgtctccaccttccacc 428
>dbj|AK121135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077D19, full insert sequence Length = 4044 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 755 ccatcctcgtctccaccttccacc 778
>gb|DQ248962.1| Oryza sativa (indica cultivar-group) hybrid type histidine kinase mRNA, complete cds Length = 3072 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 688 ccatcctcgtctccaccttccacc 711 |||||||||||||||||||||||| Sbjct: 419 ccatcctcgtctccaccttccacc 442
>ref|XM_001184057.1| PREDICTED: Strongylocentrotus purpuratus similar to CTD-binding SR-like protein rA9 (LOC582590), mRNA Length = 6003 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 gaggaggaggtggctgttgaaga 400 ||||||||||||||||||||||| Sbjct: 2464 gaggaggaggtggctgttgaaga 2486
>ref|XM_782534.2| PREDICTED: Strongylocentrotus purpuratus similar to CTD-binding SR-like protein rA9 (LOC582590), mRNA Length = 6003 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 gaggaggaggtggctgttgaaga 400 ||||||||||||||||||||||| Sbjct: 2464 gaggaggaggtggctgttgaaga 2486
>gb|AF325528.1| Lumpy skin disease virus NI-2490 isolate Neethling 2490, complete genome Length = 150773 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 41141 attataatagtattattttttggtatatttgatga 41107
>gb|AF409137.1| Lumpy skin disease virus NW-LW isolate Neethling Warmbaths LW, complete genome Length = 150793 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 41142 attataatagtattattttttggtatatttgatga 41108
>gb|AY077836.1| Goatpox virus G20-LKV, complete genome Length = 149723 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 40603 attataatagtattattttttggtatatttgatga 40569
>gb|AY077835.1| Goatpox virus Pellor, complete genome Length = 149599 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 40540 attataatagtattattttttggtatatttgatga 40506
>gb|AY077834.1| Sheeppox virus NISKHI, complete genome Length = 149662 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 40573 attataatagtattattttttggtatatttgatga 40539
>gb|AY077833.1| Sheeppox virus A, complete genome Length = 150057 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 40768 attataatagtattattttttggtatatttgatga 40734
>gb|AY077832.1| Sheeppox virus 10700-99 strain TU-V02127, complete genome Length = 149955 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 40660 attataatagtattattttttggtatatttgatga 40626
>gb|AF409138.1| Lumpy skin disease virus isolate Neethling vaccine LW 1959, complete genome Length = 150509 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1331 attataatagaattatttagtggtatatttgatga 1365 |||||||||| ||||||| ||||||||||||||| Sbjct: 41018 attataatagtattattttttggtatatttgatga 40984
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 725 cgatgcccaggacgccaccacgc 747 ||||||||||||||||||||||| Sbjct: 3265323 cgatgcccaggacgccaccacgc 3265345
>ref|NM_001061506.1| Oryza sativa (japonica cultivar-group) Os05g0228400 (Os05g0228400) mRNA, complete cds Length = 2109 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 948 tcttcttcttctccatctctcc 969 |||||||||||||||||||||| Sbjct: 25 tcttcttcttctccatctctcc 46
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 945 ttctcttcttcttctccatctc 966 |||||||||||||||||||||| Sbjct: 169694 ttctcttcttcttctccatctc 169715
>gb|AC105094.6| Homo sapiens chromosome 18, clone RP11-1096D5, complete sequence Length = 210317 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 952 cttcttctccatctctccatct 973 |||||||||||||||||||||| Sbjct: 109521 cttcttctccatctctccatct 109500
>gb|AC110997.4| Homo sapiens chromosome 18, clone RP11-56J20, complete sequence Length = 160456 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 952 cttcttctccatctctccatct 973 |||||||||||||||||||||| Sbjct: 123018 cttcttctccatctctccatct 122997
>gb|AC022861.4| Homo sapiens chromosome 8, clone RP11-343B22, complete sequence Length = 148064 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1381 tgttttatttcaaaaattgatt 1402 |||||||||||||||||||||| Sbjct: 65857 tgttttatttcaaaaattgatt 65878
>emb|AL590325.10| Human DNA sequence from clone RP11-85L21 on chromosome Xq25-26.3 Contains a nucleolin (NCL) pseudogene, a zinc finger family pseudogene, three novel genes, the 3' end of a novel gene and a CpG island, complete sequence Length = 84879 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 947 ctcttcttcttctccatctctc 968 |||||||||||||||||||||| Sbjct: 68960 ctcttcttcttctccatctctc 68981
>gb|AC009626.9| Homo sapiens, clone RP11-319N16, complete sequence Length = 182133 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1381 tgttttatttcaaaaattgatt 1402 |||||||||||||||||||||| Sbjct: 26601 tgttttatttcaaaaattgatt 26580
>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 227508 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 945 ttctcttcttcttctccatctc 966 |||||||||||||||||||||| Sbjct: 223104 ttctcttcttcttctccatctc 223083
>dbj|AK100786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O21, full insert sequence Length = 2109 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 948 tcttcttcttctccatctctcc 969 |||||||||||||||||||||| Sbjct: 26 tcttcttcttctccatctctcc 47
>emb|AL772335.5| Mouse DNA sequence from clone RP23-415F19 on chromosome 4, complete sequence Length = 201702 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1406 tgaaaacttgtgaaatggaaac 1427 |||||||||||||||||||||| Sbjct: 137715 tgaaaacttgtgaaatggaaac 137694
>emb|AL591381.17| Human DNA sequence from clone RP11-690C2 on chromosome Xq26.1-26.3, complete sequence Length = 114815 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 947 ctcttcttcttctccatctctc 968 |||||||||||||||||||||| Sbjct: 86775 ctcttcttcttctccatctctc 86754
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctcc 969 |||||||||||||||||||||| Sbjct: 20507 tcttcttcttctccatctctcc 20486
>emb|AL590282.6| Human DNA sequence from clone RP13-210D15 on chromosome Xq26.1-26.3, complete sequence Length = 139296 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 947 ctcttcttcttctccatctctc 968 |||||||||||||||||||||| Sbjct: 33389 ctcttcttcttctccatctctc 33368
>emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0132E09-OSIGBa0108L24, complete sequence Length = 130140 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 125530 tcttcttcttctccatctctc 125510
>emb|CR855168.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0112G12, complete sequence Length = 103646 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 4668 tcttcttcttctccatctctc 4648
>ref|XM_001221009.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_01789) mRNA, complete cds Length = 1476 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 ggaggaggtggctgttgaagaggtc 404 ||||||||||| ||||||||||||| Sbjct: 739 ggaggaggtgggtgttgaagaggtc 715
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 767 tgcagcgctctgcgccgtcct 787 ||||||||||||||||||||| Sbjct: 5358130 tgcagcgctctgcgccgtcct 5358110
>ref|NM_001060676.1| Oryza sativa (japonica cultivar-group) Os04g0660100 (Os04g0660100) mRNA, complete cds Length = 1312 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 103 tcttcttcttctccatctctc 123
>gb|DQ660994.1| Puma concolor clone B303 microsatellite sequence Length = 286 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1098 tcctcctcccctactatctctctct 1122 ||||||||||||||| ||||||||| Sbjct: 155 tcctcctcccctactctctctctct 131
>ref|XR_023846.1| PREDICTED: Pan troglodytes similar to stress-induced phosphoprotein STI1; XSTI1 (LOC465738), mRNA Length = 1902 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 caagccagagccagtggaaga 379 ||||||||||||||||||||| Sbjct: 682 caagccagagccagtggaaga 702
>ref|XR_018332.1| PREDICTED: Homo sapiens similar to stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) (LOC441505), mRNA Length = 1632 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 caagccagagccagtggaaga 379 ||||||||||||||||||||| Sbjct: 628 caagccagagccagtggaaga 648
>ref|XR_016229.1| PREDICTED: Homo sapiens similar to stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) (LOC441505), mRNA Length = 1632 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 caagccagagccagtggaaga 379 ||||||||||||||||||||| Sbjct: 628 caagccagagccagtggaaga 648
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 cgtctccaccttccaccgctg 715 ||||||||||||||||||||| Sbjct: 53547 cgtctccaccttccaccgctg 53527
>gb|BT017132.1| Zea mays clone EL01N0365G02.c mRNA sequence Length = 1266 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1146 ctccatcccaaaatctattgt 1166 ||||||||||||||||||||| Sbjct: 811 ctccatcccaaaatctattgt 831
>gb|AC137077.26| Medicago truncatula clone mth2-8g15, complete sequence Length = 138303 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 695 cgtctccaccttccaccgctg 715 ||||||||||||||||||||| Sbjct: 129621 cgtctccaccttccaccgctg 129641
>gb|AC121495.11| Mus musculus chromosome 18, clone RP24-181M14, complete sequence Length = 195507 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1412 cttgtgaaatggaaacctgac 1432 ||||||||||||||||||||| Sbjct: 165212 cttgtgaaatggaaacctgac 165192
>gb|AC161829.5| Mus musculus 10 BAC RP23-304K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196522 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1327 aaagattataatagaattatt 1347 ||||||||||||||||||||| Sbjct: 21429 aaagattataatagaattatt 21409
>gb|AC163668.5| Mus musculus BAC clone RP23-32P22 from chromosome 1, complete sequence Length = 222156 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 953 ttcttctccatctctccatct 973 ||||||||||||||||||||| Sbjct: 177726 ttcttctccatctctccatct 177706
>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete sequence Length = 111332 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 767 tgcagcgctctgcgccgtcct 787 ||||||||||||||||||||| Sbjct: 2062 tgcagcgctctgcgccgtcct 2082
>gb|AC162381.7| Mus musculus 10 BAC RP24-528B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150712 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1327 aaagattataatagaattatt 1347 ||||||||||||||||||||| Sbjct: 108378 aaagattataatagaattatt 108398
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 148409 tcttcttcttctccatctctc 148389
>gb|AC112206.3| Homo sapiens chromosome 5 clone RP11-83M16, complete sequence Length = 185290 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 agaggaggaggtggctgttgaagag 401 ||||||||||||||||| ||||||| Sbjct: 80680 agaggaggaggtggctggtgaagag 80704
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 33717231 tcttcttcttctccatctctc 33717211
>emb|BX942828.16| Zebrafish DNA sequence from clone CH211-237F16 in linkage group 17, complete sequence Length = 125793 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1403 atgtgaaaacttgtgaaatggaaac 1427 |||||||||||||||||||| |||| Sbjct: 81447 atgtgaaaacttgtgaaatgtaaac 81471
>dbj|AB210458.1| Ciona intestinalis Ci-FUSE mRNA, complete cds, clone: citb016j18 Length = 1268 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ccgccgcctccatctctctcc 83 ||||||||||||||||||||| Sbjct: 1202 ccgccgcctccatctctctcc 1182
>dbj|AB210457.1| Ciona intestinalis Ci-FUSE mRNA, complete cds, clone: cieg002j03 Length = 1463 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ccgccgcctccatctctctcc 83 ||||||||||||||||||||| Sbjct: 797 ccgccgcctccatctctctcc 777
>gb|AC087174.4| Homo sapiens chromosome 11, clone RP11-640J11, complete sequence Length = 187218 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1384 tttatttcaaaaattgattat 1404 ||||||||||||||||||||| Sbjct: 34435 tttatttcaaaaattgattat 34415
>emb|AL157704.10| Human DNA sequence from clone RP11-120C13 on chromosome 10 Contains part of the CUGBP2 gene for CUG triplet repeat RNA binding protein 2, complete sequence Length = 53435 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 862 aggaaggggctgaccatggagaaga 886 ||||||||||||| ||||||||||| Sbjct: 1418 aggaaggggctgaacatggagaaga 1394
>emb|AL136320.7| Human DNA sequence from clone RP3-323N1 on chromosome 10 Contains the 5' end of the CUGBP2 gene for CUG triplet repeat RNA binding protein 2, a novel gene and a CpG island, complete sequence Length = 55550 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 862 aggaaggggctgaccatggagaaga 886 ||||||||||||| ||||||||||| Sbjct: 54968 aggaaggggctgaacatggagaaga 54944
>emb|AL035451.6|HS145B8 Human DNA sequence from clone RP6-145B8 on chromosome Xq21.2-22.3 Contains a thiopurine S-methyltransferase (TPMT) pseudogene, a stress-induced-phosphoprotein 1 (STIP1) pseudogene, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex (NDUFA5) pseudogene and the 5' end of the CHM gene for choroideremia (Rab escort protein 1), complete sequence Length = 115039 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 caagccagagccagtggaaga 379 ||||||||||||||||||||| Sbjct: 56180 caagccagagccagtggaaga 56200
>gb|AF295063.1|AF314199S2 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein (CUGBP2) gene, exons 1c and 2 Length = 55550 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 862 aggaaggggctgaccatggagaaga 886 ||||||||||||| ||||||||||| Sbjct: 54968 aggaaggggctgaacatggagaaga 54944
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 148291 tcttcttcttctccatctctc 148271
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 67674 tcttcttcttctccatctctc 67654
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence Length = 204294 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1373 gtgttctttgttttatttcaaaaat 1397 |||| |||||||||||||||||||| Sbjct: 144883 gtgtgctttgttttatttcaaaaat 144859
>gb|AC022079.16|AC022079 Homo sapiens 12 BAC RP11-425D17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181193 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1046 tgctgatgtgctccccttgaa 1066 ||||||||||||||||||||| Sbjct: 23963 tgctgatgtgctccccttgaa 23943
>dbj|AK109923.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C02, full insert sequence Length = 1312 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 103 tcttcttcttctccatctctc 123
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 948 tcttcttcttctccatctctc 968 ||||||||||||||||||||| Sbjct: 52649 tcttcttcttctccatctctc 52669
>dbj|AK116225.1| Ciona intestinalis cDNA, clone:citb016j18, full insert sequence Length = 1267 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ccgccgcctccatctctctcc 83 ||||||||||||||||||||| Sbjct: 1201 ccgccgcctccatctctctcc 1181
>emb|AL355102.5|CNS05TCL Human chromosome 14 DNA sequence BAC R-404P21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201844 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1303 catattgtagcatatatgggt 1323 ||||||||||||||||||||| Sbjct: 169030 catattgtagcatatatgggt 169050
>emb|AL845320.10| Zebrafish DNA sequence from clone DKEY-30J19, complete sequence Length = 183417 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 949 cttcttcttctccatctctccatct 973 ||||||||||||| ||||||||||| Sbjct: 46359 cttcttcttctccttctctccatct 46335
>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence Length = 225687 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 953 ttcttctccatctctccatct 973 ||||||||||||||||||||| Sbjct: 19830 ttcttctccatctctccatct 19810
>gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, complete sequence Length = 163474 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 953 ttcttctccatctctccatct 973 ||||||||||||||||||||| Sbjct: 32240 ttcttctccatctctccatct 32220
>emb|AL137190.5|CNS01DWG Human chromosome 14 DNA sequence BAC R-241N4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155742 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1303 catattgtagcatatatgggt 1323 ||||||||||||||||||||| Sbjct: 11824 catattgtagcatatatgggt 11844 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 255,916,991 Number of extensions: 15494673 Number of successful extensions: 410638 Number of sequences better than 10.0: 84 Number of HSP's gapped: 410637 Number of HSP's successfully gapped: 93 Length of query: 1463 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1440 Effective length of database: 18,503,978,556 Effective search space: 26645729120640 Effective search space used: 26645729120640 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)