ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf119m14 |
|---|---|
| Clone Library Name | barley_pub |
>AK072586:Os04g0461600 | Length = 179 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +1 Query: 370 GDCLLAWCCACCVFCQEIRAVPKDAWD----WVAEVQKNGLNIMEDP 498 GDC + WCC C CQE R + +D W +++ G + P Sbjct: 124 GDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMERMGKGVATAP 170
>AK111738:Os02g0580000 | Length = 145 Score = 36.2 bits (82), Expect = 0.018 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = +1 Query: 283 CGICVAVLTRHNIRTQLRVGDTKTTSGWIGDCLLAWCCACCVFCQEIRAVPKDAWD---- 450 C + + R +R+Q + +T DCL+ C C CQE R + K +D Sbjct: 65 CSCIYSCIYRSKLRSQYGLQETPCP-----DCLVHLWCEPCALCQEYRELKKRGFDMSLG 119 Query: 451 WVAEVQKNGLN 483 W A ++K G N Sbjct: 120 WHANMEKQGQN 130
>AK109792:Os08g0409500 | Length = 426 Score = 34.7 bits (78), Expect = 0.053 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 12/111 (10%) Frame = -1 Query: 375 IADPAGGGLGITNAELGADVVAGEDGHADTTAAGREAVIDD------GAVLLHRVGEKLG 214 + DPA G LG+T+ +GAD G H + G D+ GA + VG G Sbjct: 313 LQDPAAGFLGLTHGIMGAD---GSHMHQQQRSRGHGHGGDELSGVVGGASMTRSVGG--G 367 Query: 213 GRAQTAAPPAGAT------VEGRVEVSAARLDAPALPACTSVTAPVQSEHV 79 G+ T + AGA +E E ++ + A P+ + TA ++++ V Sbjct: 368 GKKTTFSSGAGAAAHAAPQLEHNAESTSVTVAAAPTPSSAAATAAMRTQSV 418
>Os02g0202700:Os02g0202700 | Length = 298 Score = 33.9 bits (76), Expect = 0.091 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 16/85 (18%) Frame = -1 Query: 297 HADTTAAGREAVIDDGAVLLHRV-----GEKLGGRAQTAAP----PAGATVEGRVEVSA- 148 HA G AV+ DG +LH V GE +G R AGAT+ G V + A Sbjct: 183 HATGVVIGETAVVGDGVSILHHVTLGGTGEAVGDRHPKVGDGVLIGAGATILGNVRIGAG 242 Query: 147 ARLDAPAL------PACTSVTAPVQ 91 A++ A +L P T+V P + Sbjct: 243 AKIGAGSLVLADVPPGATAVGNPAR 267
>AK110972: | Length = 304 Score = 31.6 bits (70), Expect = 0.45 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Frame = -1 Query: 339 NAELGADVVA--GEDGH---ADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAGAT 175 N++LGA+ A G H D G A DGAV H + + A A P AGAT Sbjct: 74 NSDLGAEAAAELGPRAHFVRCDVADEGSVAAAVDGAVASHGRLDVMFNNAGVAGPLAGAT 133 Query: 174 VEGRVEVSAARLDAPALPACTSV 106 A LD AL A +V Sbjct: 134 -------EVASLDLAALDAVIAV 149
>Os02g0763000:Os02g0763000 | Length = 181 Score = 31.2 bits (69), Expect = 0.59 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 12/55 (21%) Frame = +1 Query: 370 GDC---LLAWCCACCVFCQEIRAVPKDAWD----WVAEVQK-----NGLNIMEDP 498 GDC L+ +CC C CQE R + +D W A V + G ++M P Sbjct: 119 GDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDRQRRGVTGASVMGAP 173
>AK070185:Os07g0553900 | Length = 120 Score = 30.8 bits (68), Expect = 0.77 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 355 TSGWIGDCLLAWCCACCVFCQEIRAV 432 T + DC+L C CC CQE R + Sbjct: 26 TDSSLDDCVLHLICPCCTLCQEARTL 51
>AK071173:Os03g0830500 | Length = 141 Score = 30.4 bits (67), Expect = 1.0 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +1 Query: 283 CGICVAVLTRHNIRTQLRVGDTKTTSGWIGDCLLAWCCACCVFCQEIRAV------PKDA 444 C + + R +R Q +GD + DC + + C C CQE R + PK Sbjct: 64 CQFVYSCVYRGKMRAQYGLGDDAACA----DCCVHFWCNKCALCQEYRELVARGYDPKLG 119 Query: 445 WD 450 WD Sbjct: 120 WD 121
>Os04g0101800:Os04g0101800 | Length = 643 Score = 30.0 bits (66), Expect = 1.3 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 15/86 (17%) Frame = -1 Query: 213 GRAQTAAPPAGATVEGRVE---VSAARLDAPALPACTSVTAPV------------QSEHV 79 G A T AP A GR V A R+ APAL + S AP+ + + Sbjct: 190 GLAVTLAPDAALVSAGRRHGKYVVAVRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKL 249 Query: 78 GLARLGHELVVIALGIGHR*EAIGFT 1 + + G LV+ +LG R + F+ Sbjct: 250 HMLKRGMRLVIASLGPADRLAIVAFS 275
>AK068171:Os01g0655400 | Length = 1350 Score = 30.0 bits (66), Expect = 1.3 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 9/89 (10%) Frame = -1 Query: 306 EDGHADTTA--AGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAGATVEGR-------VEV 154 +DG D A AG A + DG + V +L AQ P G +G E Sbjct: 1209 KDGMDDVAAPSAGPAAGLGDG---VPEVTVELADSAQEKPPAMGELGDGMEVMPPPVTET 1265 Query: 153 SAARLDAPALPACTSVTAPVQSEHVGLAR 67 S + D+PA+P+ V V H G+ + Sbjct: 1266 SLGKEDSPAVPSSPEVQEIVSGMHAGIEK 1294
>AK110176: | Length = 1237 Score = 29.6 bits (65), Expect = 1.7 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 11/58 (18%) Frame = -1 Query: 219 LGGRAQTAAPPAGATVEGRVE-----------VSAARLDAPALPACTSVTAPVQSEHV 79 L R Q+ AP +G T + E AA + APALPA T+ P Q HV Sbjct: 626 LASRPQSLAPASGTTSAIQSESTHTTRLSSDQAQAANVAAPALPA-TAAVVPAQDHHV 682
>AK109959: | Length = 1030 Score = 29.6 bits (65), Expect = 1.7 Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 20/137 (14%) Frame = -1 Query: 372 ADPAGGGLGITNAELGADVVAGEDGHADTTAA-----GREAVIDDGAVLLHRVGEKLGGR 208 AD GG E G V E +D AA G + D GA LL +VG +GG+ Sbjct: 788 ADVTGGEDYAYAEEAGMPEVKAEGSTSDAGAASGSGGGVPSQADIGA-LLSKVGPLMGGK 846 Query: 207 AQTA---------AP---PAGATVEGRVEVSAARLDAPALPACTSVTAPVQSEHV---GL 73 A A AP PAG + V S + PA ++V A + S+ V G+ Sbjct: 847 ASKAPSSEASASSAPAPAPAGLNFDINVLKSIVDRAKSSGPAASAVNAAMASQQVTTDGI 906 Query: 72 ARLGHELVVIALGIGHR 22 + L L G+ R Sbjct: 907 SSLLSSLSAKGHGVAAR 923
>Os01g0720700:Os01g0720700 | Length = 303 Score = 29.3 bits (64), Expect = 2.2 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 16/85 (18%) Frame = -1 Query: 297 HADTTAAGREAVIDDGAVLLHRV-----GEKLGGR----AQTAAPPAGATVEGRVEVSA- 148 HA G AVI D +LH V G+ +G R AGAT+ G V + A Sbjct: 190 HATGVVIGETAVIGDNVSILHHVTLGGTGKAVGDRHPKIGDGVLIGAGATILGNVRIGAG 249 Query: 147 ARLDAPAL------PACTSVTAPVQ 91 A++ A +L P T+V P + Sbjct: 250 AKIGAGSLVLIDVPPRTTAVGNPAR 274
>AK102935: | Length = 148 Score = 29.3 bits (64), Expect = 2.2 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 16/85 (18%) Frame = -1 Query: 297 HADTTAAGREAVIDDGAVLLHRV-----GEKLGGR----AQTAAPPAGATVEGRVEVSA- 148 HA G AVI D +LH V G+ +G R AGAT+ G V + A Sbjct: 35 HATGVVIGETAVIGDNVSILHHVTLGGTGKAVGDRHPKIGDGVLIGAGATILGNVRIGAG 94 Query: 147 ARLDAPAL------PACTSVTAPVQ 91 A++ A +L P T+V P + Sbjct: 95 AKIGAGSLVLIDVPPRTTAVGNPAR 119
>AK102699: | Length = 150 Score = 29.3 bits (64), Expect = 2.2 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 16/85 (18%) Frame = -1 Query: 297 HADTTAAGREAVIDDGAVLLHRV-----GEKLGGR----AQTAAPPAGATVEGRVEVSA- 148 HA G AVI D +LH V G+ +G R AGAT+ G V + A Sbjct: 37 HATGVVIGETAVIGDNVSILHHVTLGGTGKAVGDRHPKIGDGVLIGAGATILGNVRIGAG 96 Query: 147 ARLDAPAL------PACTSVTAPVQ 91 A++ A +L P T+V P + Sbjct: 97 AKIGAGSLVLIDVPPRTTAVGNPAR 121
>AK119856: | Length = 782 Score = 24.6 bits (52), Expect(2) = 2.8 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 Query: 558 EGEGEGEGHKSLLLGVDELPGVLHDVEA 475 EGEGEGEG + G +D+ A Sbjct: 387 EGEGEGEGEGAAAAQAGSASGSAYDITA 414 Score = 22.7 bits (47), Expect(2) = 2.8 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -1 Query: 576 NTRSADEGEGEGEG 535 N + EGEGEGEG Sbjct: 379 NGQGEGEGEGEGEG 392
>Os03g0830200:Os03g0830200 | Length = 150 Score = 28.9 bits (63), Expect = 2.9 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +1 Query: 373 DCLLAWCCACCVFCQEIRAVPKDAWD 450 DC + +CC C CQE R + +D Sbjct: 99 DCCVHFCCEPCALCQEYRELVARGYD 124
>AK104323:Os05g0592800 | Length = 445 Score = 28.9 bits (63), Expect = 2.9 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = -1 Query: 234 RVGEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQSEHVGLARLGHE 55 RV ++GG A + APP AP T+V A V S HV +A G Sbjct: 234 RVDAEVGGNAASGAPPV----------------APDTVGSTAVVAVVCSSHVIVANCGDS 277 Query: 54 LVVIALG 34 V+ G Sbjct: 278 RAVLCRG 284
>AK072259:Os10g0467800 | Length = 1063 Score = 28.9 bits (63), Expect = 2.9 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 373 DCLLAWCCACCVF 411 DC +WCC CC F Sbjct: 596 DCWPSWCCCCCCF 608
>AK070388:Os05g0592800 | Length = 301 Score = 28.9 bits (63), Expect = 2.9 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = -1 Query: 234 RVGEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQSEHVGLARLGHE 55 RV ++GG A + APP AP T+V A V S HV +A G Sbjct: 90 RVDAEVGGNAASGAPPV----------------APDTVGSTAVVAVVCSSHVIVANCGDS 133 Query: 54 LVVIALG 34 V+ G Sbjct: 134 RAVLCRG 140
>AK067627:Os05g0592800 | Length = 445 Score = 28.9 bits (63), Expect = 2.9 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = -1 Query: 234 RVGEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQSEHVGLARLGHE 55 RV ++GG A + APP AP T+V A V S HV +A G Sbjct: 234 RVDAEVGGNAASGAPPV----------------APDTVGSTAVVAVVCSSHVIVANCGDS 277 Query: 54 LVVIALG 34 V+ G Sbjct: 278 RAVLCRG 284
>AB071300:Os01g0236300 | Length = 695 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 216 GGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVT 103 G R + AP A VEG+ E + RL L CTS++ Sbjct: 497 GYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMKCTSIS 534
>AY224544:Os11g0455500 | Length = 468 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 228 GEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQ 91 GE L G T GR+E+ A ++ P L AC + P Q Sbjct: 5 GEDLVGERSTKLKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQ 50
>AK122115:Os11g0455500 | Length = 470 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 228 GEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQ 91 GE L G T GR+E+ A ++ P L AC + P Q Sbjct: 7 GEDLVGERSTKLKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQ 52
>AK122006:Os04g0548700 | Length = 247 Score = 28.5 bits (62), Expect = 3.8 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -1 Query: 342 TNAELGADVVAGEDGHADTTAAGREAVID---DGAVLLHR 232 TN A A G TTAAG +V+D DG +L HR Sbjct: 199 TNNNSSAAAAADRRGIRTTTAAGGGSVVDTAADGGILCHR 238
>AK119539:Os11g0455500 | Length = 470 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 228 GEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQ 91 GE L G T GR+E+ A ++ P L AC + P Q Sbjct: 7 GEDLVGERSTKLKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQ 52
>AK102521:Os01g0236300 | Length = 699 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 216 GGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVT 103 G R + AP A VEG+ E + RL L CTS++ Sbjct: 501 GYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMKCTSIS 538
>AK098924:Os11g0455500 | Length = 470 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 228 GEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQ 91 GE L G T GR+E+ A ++ P L AC + P Q Sbjct: 7 GEDLVGERSTKLKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQ 52
>AK064007:Os01g0236300 | Length = 699 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 216 GGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVT 103 G R + AP A VEG+ E + RL L CTS++ Sbjct: 501 GYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMKCTSIS 538
>AK059712:Os11g0455500 | Length = 470 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 228 GEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQ 91 GE L G T GR+E+ A ++ P L AC + P Q Sbjct: 7 GEDLVGERSTKLKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQ 52
>Os05g0533500:Os05g0533500 | Length = 314 Score = 28.1 bits (61), Expect = 5.0 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%) Frame = -1 Query: 297 HADTTAAGREAVIDDGAVLLHRV-----GEKLGGR----AQTAAPPAGATVEGRVEVSA- 148 HA G AV+ D +LH V G+ +G R AGAT+ G V++ A Sbjct: 196 HATGVVIGETAVVGDNVSILHHVTLGGTGKAVGDRHPKIGDGVLIGAGATILGNVKIGAG 255 Query: 147 ARLDAPALPACTSVTAPVQSEHVG 76 A++ A ++ + P ++ VG Sbjct: 256 AKIGAGSV---VLIDVPARNTAVG 276
>AK119940:Os07g0672500 | Length = 146 Score = 27.7 bits (60), Expect = 6.5 Identities = 21/55 (38%), Positives = 23/55 (41%) Frame = -1 Query: 336 AELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAGATV 172 AE A + G AD TAA VID LH V T A PA +TV Sbjct: 49 AEATVGTPAAKAGGADATAAAAIDVIDSSVENLHGVAR------PTGAVPASSTV 97
>AK067432:Os07g0672500 | Length = 1081 Score = 27.7 bits (60), Expect = 6.5 Identities = 21/55 (38%), Positives = 23/55 (41%) Frame = -1 Query: 336 AELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAGATV 172 AE A + G AD TAA VID LH V T A PA +TV Sbjct: 49 AEATVGTPAAKAGGADATAAAAIDVIDSSVENLHGVAR------PTGAVPASSTV 97
>AK108876: | Length = 187 Score = 27.3 bits (59), Expect = 8.5 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +1 Query: 289 ICVAVLTRHNIRTQLRV-GDTKTTSGWIGDCLLAWCCACCVFCQEIR 426 + ++ +TR IR + + GD T D L A CC CC R Sbjct: 115 LALSFITRQRIRQRYNIMGDDLT------DLLAAGCCTCCSIAHSYR 155
>AK106678:Os11g0702000 | Length = 272 Score = 27.3 bits (59), Expect = 8.5 Identities = 29/101 (28%), Positives = 36/101 (35%) Frame = -1 Query: 375 IADPAGGGLGITNAELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTA 196 + + G LG G V DG G AV+D GA V ++G A A Sbjct: 157 VPEVVGDVLGRPGRREGVLVAVAADGEEHGDVLGVLAVLDVGADAGDGVAGEVGPVAAVA 216 Query: 195 APPAGATVEGRVEVSAARLDAPALPACTSVTAPVQSEHVGL 73 +G V+ A L AL V AP E GL Sbjct: 217 EDGEEGDDDGVVDAGVAGLPERAL---VLVPAPEDGELAGL 254 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,043,569 Number of extensions: 337773 Number of successful extensions: 1658 Number of sequences better than 10.0: 35 Number of HSP's gapped: 1645 Number of HSP's successfully gapped: 36 Length of query: 208 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 112 Effective length of database: 11,555,919 Effective search space: 1294262928 Effective search space used: 1294262928 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
