ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf119m14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q1MCN6:UGPC1_RHIL3 sn-glycerol-3-phosphate import ATP-binding pr... 33 0.65
2Q6ZRP7:QSC6L_HUMAN Sulfhydryl oxidase 2 precursor - Homo sapiens... 33 0.65
3P35828:SLAP_CAUCR S-layer protein - Caulobacter crescentus (Caul... 33 1.1
4Q9Z5X5:NIFS_FRASE Cysteine desulfurase - Frankia sp. (strain EuIK1) 32 1.9
5Q43402:OLNB6_BRANA Oleosin-B6 - Brassica napus (Rape) 32 2.5
6Q2JPE4:GPDA_SYNJB Glycerol-3-phosphate dehydrogenase [NAD(P)+] -... 32 2.5
7O08841:QSCN6_CAVPO Sulfhydryl oxidase 1 precursor - Cavia porcel... 31 3.2
8Q3TMX7:QSC6L_MOUSE Sulfhydryl oxidase 2 precursor - Mus musculus... 30 5.5
9Q9RR81:PANB_DEIRA 3-methyl-2-oxobutanoate hydroxymethyltransfera... 30 5.5
10Q7V4W4:GLMM_PROMM Phosphoglucosamine mutase - Prochlorococcus ma... 30 7.2
11Q03842:FLAB1_RHIME Flagellin B - Rhizobium meliloti (Sinorhizobi... 30 7.2
12Q03841:FLAA1_RHIME Flagellin A - Rhizobium meliloti (Sinorhizobi... 30 7.2
13P20240:OTE_DROME Otefin - Drosophila melanogaster (Fruit fly) 30 9.4
14Q9K949:AROQ_BACHD 3-dehydroquinate dehydratase - Bacillus halodu... 30 9.4

>Q1MCN6:UGPC1_RHIL3 sn-glycerol-3-phosphate import ATP-binding protein ugpC 1 -|
           Rhizobium leguminosarum bv. viciae (strain 3841)
          Length = 369
 Score = 33.5 bits (75), Expect = 0.65
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = -1

Query: 270 EAVIDDGAVLLHRVGEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTAPVQ 91
           E  I+D  V ++    K+    + AAP  G  V   +   AARL AP  P   + TA   
Sbjct: 243 EGTINDEGVFVYDQSRKVALPRERAAPLKGKRVVLGMRAEAARLVAPDAPGALTATADF- 301

Query: 90  SEHVGLARLGH 58
            E +G +R+ H
Sbjct: 302 IEELGASRIVH 312



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>Q6ZRP7:QSC6L_HUMAN Sulfhydryl oxidase 2 precursor - Homo sapiens (Human)|
          Length = 698

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +1

Query: 331 LRVGDTKTTSGWIGDCLLAWCCACCVFCQEIRAVPKDAWDWVAEVQKNGLNIMED 495
           +R     +++ W+     +WC  C  +    RA+  D  DW + ++   L+ ME+
Sbjct: 71  VRGATANSSAAWLVQFYSSWCGHCIAYAPTWRALAGDVRDWASAIRVAALDCMEE 125



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>P35828:SLAP_CAUCR S-layer protein - Caulobacter crescentus (Caulobacter vibrioides)|
          Length = 1026

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 27/83 (32%), Positives = 35/83 (42%)
 Frame = -1

Query: 357 GGLGITNAELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAGA 178
           GG  +T A+   + V      AD T  G  +     AV +           QTAA  AGA
Sbjct: 423 GGTAVTVAQTAGNAVNTTLTQADVTVTGNSSTT---AVTV----------TQTAAATAGA 469

Query: 177 TVEGRVEVSAARLDAPALPACTS 109
           TV GRV  +    D+ A  A T+
Sbjct: 470 TVAGRVNGAVTITDSAAASATTA 492



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>Q9Z5X5:NIFS_FRASE Cysteine desulfurase - Frankia sp. (strain EuIK1)|
          Length = 419

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 35/107 (32%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
 Frame = -1

Query: 351 LGITNAELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPA---- 184
           LG  +A + A      DG   TTAA R AV  DG V +  +  +LG      A  A    
Sbjct: 102 LGAADAAVSAGSAVSADG---TTAAERIAVHPDGTVDVDDLRRRLGPDVALVAVMAANNE 158

Query: 183 -GATVEGRVEVSAARLDAPALPACTSVTAPVQSEHVGLARLGHELVV 46
            GA  + R  V AAR  +     C  VT  +    V   R G +L V
Sbjct: 159 TGAVNDPRPLVEAAR--SAGRCCCADVTQALGRVPVEFERTGVDLAV 203



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>Q43402:OLNB6_BRANA Oleosin-B6 - Brassica napus (Rape)|
          Length = 375

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 234 RVGEKLGGRAQTAAPPAGATVEGRVEVSAARLDAPALPACTSVTA 100
           R G ++G   +   PPAGA   G    + A  +APA PA  +  A
Sbjct: 182 RKGHRMGVNPENNPPPAGAPPTGSPPAAPAAPEAPAAPAAPAAPA 226



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>Q2JPE4:GPDA_SYNJB Glycerol-3-phosphate dehydrogenase [NAD(P)+] - Synechococcus sp.|
           (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
           Yellowstone B-Prime)
          Length = 315

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 23/58 (39%), Positives = 29/58 (50%)
 Frame = -1

Query: 372 ADPAGGGLGITNAELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQT 199
           +DP G  LG T   + A  V   DG     A  R A++  G   + RVG KLG RA+T
Sbjct: 163 SDPLGVELGGTLKNVIAIAVGVCDG-LQLGANARAALVTRGLAEMIRVGSKLGARAET 219



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>O08841:QSCN6_CAVPO Sulfhydryl oxidase 1 precursor - Cavia porcellus (Guinea pig)|
          Length = 613

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 358 SGWIGDCLLAWCCACCVFCQEIRAVPKDAWDWVAEVQKNGLNIMED 495
           S W  +   +WC  C  F    +A+ KD  DW   +    LN  ++
Sbjct: 60  SAWAVEFFASWCGHCIAFAPTWKALAKDIKDWRPALNLAALNCADE 105



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>Q3TMX7:QSC6L_MOUSE Sulfhydryl oxidase 2 precursor - Mus musculus (Mouse)|
          Length = 692

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +1

Query: 331 LRVGDTKTTSGWIGDCLLAWCCACCVFCQEIRAVPKDAWDWVAEVQKNGLNIMED 495
           +R     +++ W+     +WC  C  +    RA+  D  DW A ++   L+  E+
Sbjct: 65  VRSATGNSSAAWLVQFHSSWCGHCIGYAPTWRALAADVRDWAAAIRVAALDCAEE 119



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>Q9RR81:PANB_DEIRA 3-methyl-2-oxobutanoate hydroxymethyltransferase - Deinococcus|
           radiodurans
          Length = 293

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
 Frame = -1

Query: 348 GITNAELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRA----QTAAPPAG 181
           G+T+A   A  V  E G       G    + D   +L R G  + G      QTAA   G
Sbjct: 109 GVTDAMRHAVRVIQETGADAVKMEGSTPEVLDVVRVLSRNGVPVMGHVGLMPQTAAAQGG 168

Query: 180 ATVEGRVEVSAARL--DAPALPACTSVTAPVQSEHVGLARL-GHELVVIALGIG 28
             V+G+ + SA R    A AL    +    +++    LARL    L V  +GIG
Sbjct: 169 LRVQGKDDDSARRTLEGAVALQEAGAFAVVLEAIPARLARLISERLSVATIGIG 222



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>Q7V4W4:GLMM_PROMM Phosphoglucosamine mutase - Prochlorococcus marinus (strain MIT|
           9313)
          Length = 468

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
 Frame = -1

Query: 369 DPAGGGLGITNAELGADVVAGEDGHADTTAAGREA------VIDDGAVLLHRVGEKLGGR 208
           DP G  LG   A  G D + G  G   T A   +       V+ D   +L  +  +  G 
Sbjct: 7   DPLGVPLGTAQASFGTDGIRGRVGTLLTPAFILQVGYWCGQVLPDQGPVLIGMDSRSSGA 66

Query: 207 AQTAAPPAGATVEGRVEVSAARLDAPALP 121
              +A  AG T  GR   +      PA+P
Sbjct: 67  MVASALTAGLTAAGREVWTLGLCPTPAVP 95



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>Q03842:FLAB1_RHIME Flagellin B - Rhizobium meliloti (Sinorhizobium meliloti)|
          Length = 394

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
 Frame = -1

Query: 336 AELGADVVAGE----DGH----ADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAG 181
           A +GA  +AG+     G      D  A G+E V DDG           G  A   A PA 
Sbjct: 230 ANVGAGALAGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPAS 289

Query: 180 -ATVEGRVEVSAARLDA------PALPACTSVTAPVQS 88
            AT++  +   A  LDA       AL   TS  A + S
Sbjct: 290 IATIDITIAAQAGNLDALIAGVDEALTDMTSAAADLGS 327



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>Q03841:FLAA1_RHIME Flagellin A - Rhizobium meliloti (Sinorhizobium meliloti)|
          Length = 394

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
 Frame = -1

Query: 336 AELGADVVAGE----DGH----ADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAG 181
           A +GA  +AG+     G      D  A G+E V DDG           G  A   A PA 
Sbjct: 230 ANVGAGALAGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPAS 289

Query: 180 -ATVEGRVEVSAARLDA------PALPACTSVTAPVQS 88
            AT++  +   A  LDA       AL   TS  A + S
Sbjct: 290 IATIDITIAAQAGNLDALIAGVDEALTDMTSAAASLGS 327



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>P20240:OTE_DROME Otefin - Drosophila melanogaster (Fruit fly)|
          Length = 424

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 25/79 (31%), Positives = 37/79 (46%)
 Frame = -1

Query: 345 ITNAELGADVVAGEDGHADTTAAGREAVIDDGAVLLHRVGEKLGGRAQTAAPPAGATVEG 166
           ++NAEL A ++A    +   T + R+       VL+ R+   +GG+A  AA P       
Sbjct: 10  LSNAELRAKMLAQGLPNIPVTDSSRK-------VLVKRLRASIGGQASPAASPKKT---N 59

Query: 165 RVEVSAARLDAPALPACTS 109
           R E  A    AP+ PA  S
Sbjct: 60  RRETLAPAPGAPSAPAAAS 78



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>Q9K949:AROQ_BACHD 3-dehydroquinate dehydratase - Bacillus halodurans|
          Length = 145

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -1

Query: 162 VEVSAARLDAPALPACTSVTAPV-QSEHVGLARLGHELVVIALGIGHR 22
           +EV  + + A      TSVTAPV + + VGL  +G+EL ++AL  G +
Sbjct: 97  IEVHLSNVHARESFRHTSVTAPVTKGQIVGLGVIGYELAMLALLEGEK 144


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 92,135,106
Number of extensions: 1796213
Number of successful extensions: 6668
Number of sequences better than 10.0: 14
Number of HSP's gapped: 6611
Number of HSP's successfully gapped: 14
Length of query: 208
Length of database: 100,686,439
Length adjustment: 108
Effective length of query: 100
Effective length of database: 71,062,579
Effective search space: 7106257900
Effective search space used: 7106257900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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