ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf115a19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U80041.1|AFU80041 Avena fatua Af10-protein mRNA, complete cds Length = 2103 Score = 1273 bits (642), Expect = 0.0 Identities = 1047/1184 (88%), Gaps = 3/1184 (0%) Strand = Plus / Plus Query: 288 ccggccatggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtc 347 |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| Sbjct: 79 ccggccatggatttcatgaaggtcttcgatcagaccgtgcgagagatcaagagggaggtc 138 Query: 348 aatctcaaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgat 407 || || |||||||||||||| |||||||||||||||||||| ||||| || ||||||||| Sbjct: 139 aacctgaaggtgctcaaggttcccgagctcgaacagaaggtgcttgatgcaacaagtgat 198 Query: 408 gaaccttggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtac 467 |||||||||||||| ||||| |||||||||||| |||| |||||||||||||| ||| Sbjct: 199 gaaccttggggtccacatggaagtgctctttcagacgtagcgcaggccaccaagaaatac 258 Query: 468 tctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaac 527 ||||||||||||||||| ||||||||||| ||||| ||| | | |||||||| | ||| Sbjct: 259 tctgagtgtcagatggtaatgggtgtcctttgggctaggcttgctgagcgagactcgaac 318 Query: 528 tggcgtcatgtgtataaggcactgacgattattgagtacttgatagcgaatggttctgag 587 ||||| |||||||||||||| ||||| ||||| |||||||||||||| || ||||||||| Sbjct: 319 tggcgccatgtgtataaggcgctgacaattatcgagtacttgatagccaacggttctgag 378 Query: 588 cgggcagttgatgacattctcgatcattattcaaagatctcggttctttcgagttttgag 647 ||||| |||||| |||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 379 cgggcggttgataacatccttgatcatttttcaaagatctcggttctttcgagttttgag 438 Query: 648 tttgtggaacctaatggaaaagactctggaataaatgtgaggaagaaagtggaaactctg 707 ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 439 tttgtggaaccgaatggaaaagatgctggaataaatgtgaggaagaaagtcgaaactcta 498 Query: 708 gtgggaatcatcaatgataaggagagaataaaggctgtgagagagaaagctgccagtaac 767 ||||| ||||| ||||| ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 499 gtgggcatcataaatgacaaggatagaataaaggctgtgagagataaagcagccagtaac 558 Query: 768 cgtgacaagtacgttgggttatcatcaacagggtcaacatatagatcaagctcagcctct 827 ||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||| || Sbjct: 559 cgtgacaagtacgttgggttatcctcaaccggatcatcatatagatcaagctcagccact 618 Query: 828 gtaggtagcaactacagttcaggtgaacgttatggcagttttggtggaacaagggaggct 887 ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 619 gtagggagcaattacagttcaggtgaacgttatgggagttttggtggcacaagggagggt 678 Query: 888 gattcgttcagtaacagttacagggacaaagaacctgttaaaacctcttcaagtaatact 947 ||||||||||| |||||||||| |||||||||| ||| |||||||||| || ||| || | Sbjct: 679 gattcgttcagcaacagttacaaggacaaagaatctgctaaaacctctgcaggtagtaat 738 Query: 948 ggcaggcgcaaatctggcagcaagataagaaaggatgcggatcatgatagaagctcatcg 1007 ||||| |||||||||||||||| |||||| |||||| | |||||||||||||| ||| Sbjct: 739 ggcagcaagaaatctggcagcaagacaagaaaagatgcgaagcatgatagaagctcctcg 798 Query: 1008 aagtccccatctaacacaaaaggcaatgaggatgaattcgatgactttgatcctcgtgga 1067 ||| | ||||||| ||||| ||||||| ||||| ||||||||||||||||| |||||| Sbjct: 799 aagccaccatctactgcaaaaagcaatgaagatgacttcgatgactttgatccccgtgga 858 Query: 1068 tcttcttcaaatggtgcagct---aatacaaagactgccgaggtggatcttcttggccca 1124 ||||||||||||| ||||||| ||| | |||||| |||||| |||||| |||||||| Sbjct: 859 tcttcttcaaatgatgcagctaacaatgcgaagactagcgaggtcgatctttttggccca 918 Query: 1125 aacttgatggatgatttccttgacgagcctgcagccaccccagcnnnnnnnngtgcttta 1184 |||||||||||||||||| | || |||||||||||||| ||||| ||| | || Sbjct: 919 aacttgatggatgatttcatggatgagcctgcagccactccagcaacaaaaggtgttgta 978 Query: 1185 gaacctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaa 1244 ||||||||||||||||| |||| |||||||||||||||||| |||| |||| |||| ||| Sbjct: 979 gaacctcaggttgatctatttggtgatgcagatttccaatcagcaaccccaagtgcagaa 1038 Query: 1245 acagctgcgcatcaggatgtccaggaaactgttgaccttttttcgggaaatgcaaccttt 1304 || ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct: 1039 actgctgcgcatcaggatgtccaggacaatgttgacctttttgcgggaaatgcaaccttt 1098 Query: 1305 gcttcagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttct 1364 |||||||| |||||| ||||||| |||||||| |||||||||| ||| |||||| ||||| Sbjct: 1099 gcttcagcatttccatcacagacggggtttattccaccaccaagttccgggacatcttct 1158 Query: 1365 aatgctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgat 1424 ||| |||| || ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1159 tctgccaatagttttgtgtccaagaagacagtacctgaaccatttgatcctttcggtgat 1218 Query: 1425 attcctttaagcagtttcgggggatctgacccatttggtgactt 1468 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1219 attcctttaagcagttttggaggatctgacccatttggtgactt 1262 Score = 440 bits (222), Expect = e-119 Identities = 496/586 (84%), Gaps = 11/586 (1%) Strand = Plus / Plus Query: 1486 caccaccacctgtacacagctccactggaaatatcagcacgtcaagtcagaaccttgagg 1545 |||| ||| ||||||||| ||||||||||||||||||||| | ||||||||| | ||| Sbjct: 1289 caccgccagctgtacacaattccactggaaatatcagcacgccgagtcagaactctcagg 1348 Query: 1546 cagcatcggactttggtgcctttgaatcaaacaccgcggatacagctaaagaccccttcg 1605 ||||||| |||||||| ||||||||||| ||||||| | |||||||||| ||||| | Sbjct: 1349 cagcatcagactttggcgcctttgaatctaacaccggaggcgcagctaaagatccctttg 1408 Query: 1606 acttttcttccactggcaattttggcaaagcagatgtagcacctttggcagctcccaaaa 1665 | ||||||||| |||||||||||||||| || | ||| ||||||||||||||||||||| Sbjct: 1409 atttttcttccggtggcaattttggcaaaacaaacgtaacacctttggcagctcccaaaa 1468 Query: 1666 ctgatgcgtctgattttggtgccttcgttacaaacactgaagaagcagctaaagacccct 1725 | || |||||||||| ||||| ||||| ||||||||| ||| ||||| ||||||| Sbjct: 1469 ccgacacgtctgatttcggtgcattcgtagcaaacactgcggaacgtgctaaggacccct 1528 Query: 1726 tcaatctttcttcaagtat---taatggaagggcagaccaaacacctttggcagctccca 1782 | |||||||||| || || ||||||||| ||| |||||||||| |||||||||||| Sbjct: 1529 ttgatctttcttctagcatcaacaatggaaggacaggccaaacacctctggcagctccca 1588 Query: 1783 agtccaacaccaagaaagaaaattttcaggtcaaatctggcatatgggctgactctttga 1842 |||| |||||||||||||||||| | |||||||||||| |||||||||| |||||||||| Sbjct: 1589 agtctaacaccaagaaagaaaatctccaggtcaaatctagcatatgggccgactctttga 1648 Query: 1843 gccgtggattgattgatctgaacataactggaccaaagaaggtgaacttagcagatgttg 1902 |||||||||||||||||||||||||||| |||||||||||||||||||| || || |||| Sbjct: 1649 gccgtggattgattgatctgaacataaccggaccaaagaaggtgaacttggccgacgttg 1708 Query: 1903 gggtcgtcggcggccttagtgatgggttcgacgataaggc---acagccctcatggaaca 1959 || |||| |||||||| ||||||||| || || ||||| |||||||| ||||||| Sbjct: 1709 ggatcgtgggcggcctcggtgatgggtcagatgacaaggctcatcagccctcctggaaca 1768 Query: 1960 tgggtatgggtgcaggggtatctggcctaggaatgtctggagttcctccttctacgcaag 2019 || || || |||| |||||| ||||| ||||||||| | ||||| ||||| |||| Sbjct: 1769 tg-----ggcggcggggggatctggtctagggatgtctggaatccctccatctacacaag 1823 Query: 2020 gcggtggcatcgagagcttggcaaactacaacaagtatcagtttgg 2065 |||| ||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1824 gcggcggcatcgagagcttggcgaactacaacaagtaccagtttgg 1869
>ref|NM_001060290.1| Oryza sativa (japonica cultivar-group) Os04g0599900 (Os04g0599900) mRNA, complete cds Length = 2358 Score = 620 bits (313), Expect = e-174 Identities = 601/697 (86%) Strand = Plus / Plus Query: 288 ccggccatggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtc 347 ||||| ||||||||| |||||| ||||||||| |||| ||||||| |||||||||||| Sbjct: 289 ccggcgatggatttcgtgaaggttttcgatcaggccgtgcgggagataaagagggaggtc 348 Query: 348 aatctcaaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgat 407 ||| | |||||||||||||| || ||||||||||||||||||||||| || ||||| ||| Sbjct: 349 aatttgaaggtgctcaaggttccagagctcgaacagaaggtacttgatgcaacaagcgat 408 Query: 408 gaaccttggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtac 467 ||||||||||| || ||||| || |||||||||||||| | || ||||||||||||| | Sbjct: 409 gaaccttggggccctcatggtactactctttcagagctatcacatgccaccaagaagttc 468 Query: 468 tctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaac 527 |||| ||||||||||| ||| ||||||||||| | ||| || ||||||||| | || Sbjct: 469 gctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaa 528 Query: 528 tggcgtcatgtgtataaggcactgacgattattgagtacttgatagcgaatggttctgag 587 |||||||| ||||||||||| |||| |||||||||||||| ||||| |||||||||||| Sbjct: 529 tggcgtcacgtgtataaggctttgacaattattgagtacttaatagccaatggttctgag 588 Query: 588 cgggcagttgatgacattctcgatcattattcaaagatctcggttctttcgagttttgag 647 |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 589 cgggcagttgatgacattcttgatcactattcaaagatctcggttctttcaagttttgaa 648 Query: 648 tttgtggaacctaatggaaaagactctggaataaatgtgaggaagaaagtggaaactctg 707 | ||||||||||||||||||||| |||||||||||||||| |||||||| |||||| | Sbjct: 649 tatgtggaacctaatggaaaagatgctggaataaatgtgagaaagaaagtcgaaactata 708 Query: 708 gtgggaatcatcaatgataaggagagaataaaggctgtgagagagaaagctgccagtaac 767 ||||| |||| ||||| ||||||| ||||||| |||| ||||||||||| |||||||| Sbjct: 709 ttgggactcataaatgacaaggagaaaataaagtctgtaagagagaaagccgccagtaat 768 Query: 768 cgtgacaagtacgttgggttatcatcaacagggtcaacatatagatcaagctcagcctct 827 ||||||||||| |||||| ||||||| |||||| |||||||| |||||||| || || Sbjct: 769 cgtgacaagtatgttgggctatcatcgacagggataacatataagtcaagctctgcttca 828 Query: 828 gtaggtagcaactacagttcaggtgaacgttatggcagttttggtggaacaagggaggct 887 | ||||||||||| ||||| |||||||||||||| |||||| |||| |||||||| | | Sbjct: 829 tttggtagcaactatagttctggtgaacgttatgggagttttagtggtacaagggaaggt 888 Query: 888 gattcgttcagtaacagttacagggacaaagaacctgttaaaacctcttcaagtaatact 947 ||||| | | || ||||||| ||||| ||||||||||||||| ||||| ||||| ||||| Sbjct: 889 gattcatacggtgacagttatagggataaagaacctgttaaatcctctccaagttatact 948 Query: 948 ggcaggcgcaaatctggcagcaagataagaaaggatg 984 ||||| | ||||||||||||| ||||| |||||||| Sbjct: 949 ggcagccagaaatctggcagcaggataaaaaaggatg 985 Score = 244 bits (123), Expect = 1e-60 Identities = 269/318 (84%), Gaps = 6/318 (1%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 1758 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 1817 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1818 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 1877 Query: 1868 aactggaccaaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgg 1927 ||||||||||||||||||||||||||| || |||||| | ||||| ||||| ||| || Sbjct: 1878 aactggaccaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgg 1937 Query: 1928 gttcgacgataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcct 1987 || || ||||| || | ||||||||||| | ||||||||||| | || |||| Sbjct: 1938 gtctgatgataaagctctgccctcatggacc------atgggtgcaggaggttccagcct 1991 Query: 1988 aggaatgtctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaacta 2047 ||||||||| ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||| Sbjct: 1992 aggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaacta 2051 Query: 2048 caacaagtatcagtttgg 2065 ||||||||| |||||||| Sbjct: 2052 caacaagtaccagtttgg 2069 Score = 139 bits (70), Expect = 5e-29 Identities = 225/276 (81%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 1199 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 1258 Query: 1249 ctgcgcatcaggatgtccaggaaactgttgaccttttttcgggaaatgcaacctttgctt 1308 ||||| | |||||||||| | ||| ||||||||| ||| | | || |||| | Sbjct: 1259 ctgcgggttcagatgtccagggcaatgtagacctttttgcggaacagccagccttcacag 1318 Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 1319 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 1375 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 1376 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 1435 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 1436 ctataaacagctttgatggatctgatccatttggtg 1471 Score = 119 bits (60), Expect = 5e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggtg 1083 |||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 1031 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggtg 1090 Query: 1084 cagctaatacaaagactgccgaggtggatcttcttggcccaaacttgatggatgatttcc 1143 ||||||||||||| || | ||||||||| ||| ||||||||| ||||||||||| Sbjct: 1091 cagctaatacaaacaccagtggcgtggatctttttgccccaaacttattggatgatttca 1150 Query: 1144 ttgacgagcctgcagc 1159 | || | ||||||||| Sbjct: 1151 tcgatgtgcctgcagc 1166 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | |||||||| |||||||||| ||||| Sbjct: 1527 tggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttg 1585 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 1652 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 1697
>dbj|AK121748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087C14, full insert sequence Length = 2359 Score = 613 bits (309), Expect = e-171 Identities = 600/697 (86%) Strand = Plus / Plus Query: 288 ccggccatggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtc 347 ||||| ||||||||| |||||| ||||||||| |||| ||||||| |||||||||||| Sbjct: 290 ccggcgatggatttcgtgaaggttttcgatcaggccgtgcgggagataaagagggaggtc 349 Query: 348 aatctcaaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgat 407 ||| | ||||| |||||||| || ||||||||||||||||||||||| || ||||| ||| Sbjct: 350 aatttgaaggtactcaaggttccagagctcgaacagaaggtacttgatgcaacaagcgat 409 Query: 408 gaaccttggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtac 467 ||||||||||| || ||||| || |||||||||||||| | || ||||||||||||| | Sbjct: 410 gaaccttggggccctcatggtactactctttcagagctatcacatgccaccaagaagttc 469 Query: 468 tctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaac 527 |||| ||||||||||| ||| ||||||||||| | ||| || ||||||||| | || Sbjct: 470 gctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaa 529 Query: 528 tggcgtcatgtgtataaggcactgacgattattgagtacttgatagcgaatggttctgag 587 |||||||| ||||||||||| |||| |||||||||||||| ||||| |||||||||||| Sbjct: 530 tggcgtcacgtgtataaggctttgacaattattgagtacttaatagccaatggttctgag 589 Query: 588 cgggcagttgatgacattctcgatcattattcaaagatctcggttctttcgagttttgag 647 |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 590 cgggcagttgatgacattcttgatcactattcaaagatctcggttctttcaagttttgaa 649 Query: 648 tttgtggaacctaatggaaaagactctggaataaatgtgaggaagaaagtggaaactctg 707 | ||||||||||||||||||||| |||||||||||||||| |||||||| |||||| | Sbjct: 650 tatgtggaacctaatggaaaagatgctggaataaatgtgagaaagaaagtcgaaactata 709 Query: 708 gtgggaatcatcaatgataaggagagaataaaggctgtgagagagaaagctgccagtaac 767 ||||| |||| ||||| ||||||| ||||||| |||| ||||||||||| |||||||| Sbjct: 710 ttgggactcataaatgacaaggagaaaataaagtctgtaagagagaaagccgccagtaat 769 Query: 768 cgtgacaagtacgttgggttatcatcaacagggtcaacatatagatcaagctcagcctct 827 ||||||||||| |||||| ||||||| |||||| |||||||| |||||||| || || Sbjct: 770 cgtgacaagtatgttgggctatcatcgacagggataacatataagtcaagctctgcttca 829 Query: 828 gtaggtagcaactacagttcaggtgaacgttatggcagttttggtggaacaagggaggct 887 | ||||||||||| ||||| |||||||||||||| |||||| |||| |||||||| | | Sbjct: 830 tttggtagcaactatagttctggtgaacgttatgggagttttagtggtacaagggaaggt 889 Query: 888 gattcgttcagtaacagttacagggacaaagaacctgttaaaacctcttcaagtaatact 947 ||||| | | || ||||||| ||||| ||||||||||||||| ||||| ||||| ||||| Sbjct: 890 gattcatacggtgacagttatagggataaagaacctgttaaatcctctccaagttatact 949 Query: 948 ggcaggcgcaaatctggcagcaagataagaaaggatg 984 ||||| | ||||||||||||| ||||| |||||||| Sbjct: 950 ggcagccagaaatctggcagcaggataaaaaaggatg 986 Score = 244 bits (123), Expect = 1e-60 Identities = 269/318 (84%), Gaps = 6/318 (1%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 1759 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 1818 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1819 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 1878 Query: 1868 aactggaccaaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgg 1927 ||||||||||||||||||||||||||| || |||||| | ||||| ||||| ||| || Sbjct: 1879 aactggaccaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgg 1938 Query: 1928 gttcgacgataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcct 1987 || || ||||| || | ||||||||||| | ||||||||||| | || |||| Sbjct: 1939 gtctgatgataaagctctgccctcatggacc------atgggtgcaggaggttccagcct 1992 Query: 1988 aggaatgtctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaacta 2047 ||||||||| ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||| Sbjct: 1993 aggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaacta 2052 Query: 2048 caacaagtatcagtttgg 2065 ||||||||| |||||||| Sbjct: 2053 caacaagtaccagtttgg 2070 Score = 139 bits (70), Expect = 5e-29 Identities = 225/276 (81%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 1200 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 1259 Query: 1249 ctgcgcatcaggatgtccaggaaactgttgaccttttttcgggaaatgcaacctttgctt 1308 ||||| | |||||||||| | ||| ||||||||| ||| | | || |||| | Sbjct: 1260 ctgcgggttcagatgtccagggcaatgtagacctttttgcggaacagccagccttcacag 1319 Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 1320 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 1376 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 1377 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 1436 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 1437 ctataaacagctttgatggatctgatccatttggtg 1472 Score = 119 bits (60), Expect = 5e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggtg 1083 |||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 1032 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggtg 1091 Query: 1084 cagctaatacaaagactgccgaggtggatcttcttggcccaaacttgatggatgatttcc 1143 ||||||||||||| || | ||||||||| ||| ||||||||| ||||||||||| Sbjct: 1092 cagctaatacaaacaccagtggcgtggatctttttgccccaaacttattggatgatttca 1151 Query: 1144 ttgacgagcctgcagc 1159 | || | ||||||||| Sbjct: 1152 tcgatgtgcctgcagc 1167 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | |||||||| |||||||||| ||||| Sbjct: 1528 tggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttg 1586 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 1653 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 1698
>dbj|AK067675.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118P18, full insert sequence Length = 2346 Score = 613 bits (309), Expect = e-171 Identities = 600/697 (86%) Strand = Plus / Plus Query: 288 ccggccatggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtc 347 ||||| ||||||||| |||||| ||||||||| |||| ||||||| |||||||||||| Sbjct: 318 ccggcgatggatttcgtgaaggttttcgatcaggccgtgcgggagataaagagggaggtc 377 Query: 348 aatctcaaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgat 407 ||| | |||||||||||||| || ||||||||||||||||||||||| || ||||| ||| Sbjct: 378 aatttgaaggtgctcaaggttccagagctcgaacagaaggtacttgatgcaacaagcgat 437 Query: 408 gaaccttggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtac 467 ||||||||||| || ||||| || |||||||||||||| | || ||||||||||||| | Sbjct: 438 gaaccttggggccctcatggtactactctttcagagctatcacatgccaccaagaagttc 497 Query: 468 tctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaac 527 |||| ||||||||||| ||| ||||||||||| | ||| || ||||||||| | || Sbjct: 498 gctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaa 557 Query: 528 tggcgtcatgtgtataaggcactgacgattattgagtacttgatagcgaatggttctgag 587 |||||||| ||||||||||| |||| |||||||||||||| ||||| |||||||||||| Sbjct: 558 tggcgtcacgtgtataaggctttgacaattattgagtacttaatagccaatggttctgag 617 Query: 588 cgggcagttgatgacattctcgatcattattcaaagatctcggttctttcgagttttgag 647 |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 618 cgggcagttgatgacattcttgatcactattcaaagatctcggttctttcaagttttgaa 677 Query: 648 tttgtggaacctaatggaaaagactctggaataaatgtgaggaagaaagtggaaactctg 707 | ||||||||||||||||||||| ||||| |||||||||| |||||||| |||||| | Sbjct: 678 tatgtggaacctaatggaaaagatgctggattaaatgtgagaaagaaagtcgaaactata 737 Query: 708 gtgggaatcatcaatgataaggagagaataaaggctgtgagagagaaagctgccagtaac 767 ||||| |||| ||||| ||||||| ||||||| |||| ||||||||||| |||||||| Sbjct: 738 ttgggactcataaatgacaaggagaaaataaagtctgtaagagagaaagccgccagtaat 797 Query: 768 cgtgacaagtacgttgggttatcatcaacagggtcaacatatagatcaagctcagcctct 827 ||||||||||| |||||| ||||||| |||||| |||||||| |||||||| || || Sbjct: 798 cgtgacaagtatgttgggctatcatcgacagggataacatataagtcaagctctgcttca 857 Query: 828 gtaggtagcaactacagttcaggtgaacgttatggcagttttggtggaacaagggaggct 887 | ||||||||||| ||||| |||||||||||||| |||||| |||| |||||||| | | Sbjct: 858 tttggtagcaactatagttctggtgaacgttatgggagttttagtggtacaagggaaggt 917 Query: 888 gattcgttcagtaacagttacagggacaaagaacctgttaaaacctcttcaagtaatact 947 ||||| | | || ||||||| ||||| ||||||||||||||| ||||| ||||| ||||| Sbjct: 918 gattcatacggtgacagttatagggataaagaacctgttaaatcctctccaagttatact 977 Query: 948 ggcaggcgcaaatctggcagcaagataagaaaggatg 984 ||||| | ||||||||||||| ||||| |||||||| Sbjct: 978 ggcagccagaaatctggcagcaggataaaaaaggatg 1014 Score = 244 bits (123), Expect = 1e-60 Identities = 269/318 (84%), Gaps = 6/318 (1%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 1787 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 1846 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1847 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 1906 Query: 1868 aactggaccaaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgg 1927 ||||||||||||||||||||||||||| || |||||| | ||||| ||||| ||| || Sbjct: 1907 aactggaccaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgg 1966 Query: 1928 gttcgacgataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcct 1987 || || ||||| || | ||||||||||| | ||||||||||| | || |||| Sbjct: 1967 gtctgatgataaagctctgccctcatggacc------atgggtgcaggaggttccagcct 2020 Query: 1988 aggaatgtctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaacta 2047 ||||||||| ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||| Sbjct: 2021 aggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaacta 2080 Query: 2048 caacaagtatcagtttgg 2065 ||||||||| |||||||| Sbjct: 2081 caacaagtaccagtttgg 2098 Score = 139 bits (70), Expect = 5e-29 Identities = 225/276 (81%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 1228 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 1287 Query: 1249 ctgcgcatcaggatgtccaggaaactgttgaccttttttcgggaaatgcaacctttgctt 1308 ||||| | |||||||||| | ||| ||||||||| ||| | | || |||| | Sbjct: 1288 ctgcgggttcagatgtccagggcaatgtagacctttttgcggaacagccagccttcacag 1347 Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 1348 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 1404 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 1405 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 1464 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 1465 ctataaacagctttgatggatctgatccatttggtg 1500 Score = 119 bits (60), Expect = 5e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggtg 1083 |||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 1060 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggtg 1119 Query: 1084 cagctaatacaaagactgccgaggtggatcttcttggcccaaacttgatggatgatttcc 1143 ||||||||||||| || | ||||||||| ||| ||||||||| ||||||||||| Sbjct: 1120 cagctaatacaaacaccagtggcgtggatctttttgccccaaacttattggatgatttca 1179 Query: 1144 ttgacgagcctgcagc 1159 | || | ||||||||| Sbjct: 1180 tcgatgtgcctgcagc 1195 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | |||||||| |||||||||| ||||| Sbjct: 1556 tggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttg 1614 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 1681 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 1726
>dbj|AK059135.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H05, full insert sequence Length = 1592 Score = 244 bits (123), Expect = 1e-60 Identities = 269/318 (84%), Gaps = 6/318 (1%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 1033 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 1092 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1093 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 1152 Query: 1868 aactggaccaaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgg 1927 ||||||||||||||||||||||||||| || |||||| | ||||| ||||| ||| || Sbjct: 1153 aactggaccaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgg 1212 Query: 1928 gttcgacgataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcct 1987 || || ||||| || | ||||||||||| | ||||||||||| | || |||| Sbjct: 1213 gtctgatgataaagctctgccctcatggacc------atgggtgcaggaggttccagcct 1266 Query: 1988 aggaatgtctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaacta 2047 ||||||||| ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||| Sbjct: 1267 aggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaacta 1326 Query: 2048 caacaagtatcagtttgg 2065 ||||||||| |||||||| Sbjct: 1327 caacaagtaccagtttgg 1344 Score = 212 bits (107), Expect = 4e-51 Identities = 221/259 (85%) Strand = Plus / Plus Query: 726 aaggagagaataaaggctgtgagagagaaagctgccagtaaccgtgacaagtacgttggg 785 ||||||| ||||||| |||| ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 2 aaggagaaaataaagtctgtaagagagaaagccgccagtaatcgtgacaagtatgttggg 61 Query: 786 ttatcatcaacagggtcaacatatagatcaagctcagcctctgtaggtagcaactacagt 845 ||||||| |||||| |||||||| |||||||| || || | ||||||||||| ||| Sbjct: 62 ctatcatcgacagggataacatataagtcaagctctgcttcatttggtagcaactatagt 121 Query: 846 tcaggtgaacgttatggcagttttggtggaacaagggaggctgattcgttcagtaacagt 905 || |||||||||||||| |||||| |||| |||||||| | |||||| | | || ||||| Sbjct: 122 tctggtgaacgttatgggagttttagtggtacaagggaaggtgattcatacggtgacagt 181 Query: 906 tacagggacaaagaacctgttaaaacctcttcaagtaatactggcaggcgcaaatctggc 965 || ||||| ||||||||||||||| ||||| ||||| |||||||||| | ||||||||| Sbjct: 182 tatagggataaagaacctgttaaatcctctccaagttatactggcagccagaaatctggc 241 Query: 966 agcaagataagaaaggatg 984 |||| ||||| |||||||| Sbjct: 242 agcaggataaaaaaggatg 260 Score = 139 bits (70), Expect = 5e-29 Identities = 225/276 (81%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 474 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 533 Query: 1249 ctgcgcatcaggatgtccaggaaactgttgaccttttttcgggaaatgcaacctttgctt 1308 ||||| | |||||||||| | ||| ||||||||| ||| | | || |||| | Sbjct: 534 ctgcgggttcagatgtccagggcaatgtagacctttttgcggaacagccagccttcacag 593 Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 594 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 650 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 651 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 710 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 711 ctataaacagctttgatggatctgatccatttggtg 746 Score = 119 bits (60), Expect = 5e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggtg 1083 |||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||| Sbjct: 306 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggtg 365 Query: 1084 cagctaatacaaagactgccgaggtggatcttcttggcccaaacttgatggatgatttcc 1143 ||||||||||||| || | ||||||||| ||| ||||||||| ||||||||||| Sbjct: 366 cagctaatacaaacaccagtggcgtggatctttttgccccaaacttattggatgatttca 425 Query: 1144 ttgacgagcctgcagc 1159 | || | ||||||||| Sbjct: 426 tcgatgtgcctgcagc 441 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | ||||| || |||||||||| ||||| Sbjct: 802 tggaaatatcagcacaccaagtcagaaccctcaagcagcgtctgactttggtggctttg 860 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 927 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 972
>emb|AJ575225.1|OSA575225 Oryza sativa (japonica cultivar-group) partial mRNA for ENTH1 protein Length = 431 Score = 228 bits (115), Expect = 8e-56 Identities = 258/306 (84%), Gaps = 6/306 (1%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 132 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 191 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 192 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 251 Query: 1868 aactggaccaaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgg 1927 ||||||||||||||||||||||||||| || |||||| | ||||| ||||| ||| || Sbjct: 252 aactggaccaaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgg 311 Query: 1928 gttcgacgataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcct 1987 || || ||||| || | ||||||||||| | ||||||||||| | || |||| Sbjct: 312 gtctgatgataaagctctgccctcatggacc------atgggtgcaggaggttccagcct 365 Query: 1988 aggaatgtctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaacta 2047 ||||||||| ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||| Sbjct: 366 aggaatgtccggaattccttcatctacacaaagtggtggcattgagagcttagctaacta 425 Query: 2048 caacaa 2053 |||||| Sbjct: 426 caacaa 431 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 26 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 71
>emb|CR855228.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0403H10-OSIGBa0105A11, complete sequence Length = 142564 Score = 167 bits (84), Expect = 2e-37 Identities = 117/128 (91%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 4178 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 4237 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 4238 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 4297 Query: 1868 aactggac 1875 |||||||| Sbjct: 4298 aactggac 4305 Score = 153 bits (77), Expect = 4e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 629 ggttctttcgagttttgagtttgtggaacctaatggaaaagactctggaataaatgtgag 688 ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||| Sbjct: 1954 ggttctttcaagttttgaatatgtggaacctaatggaaaagatgctggaataaatgtgag 2013 Query: 689 gaagaaagtggaaactctggtgggaatcatcaatgataaggagagaataaaggctgtgag 748 |||||||| |||||| | ||||| |||| ||||| ||||||| ||||||| |||| || Sbjct: 2014 aaagaaagtcgaaactatattgggactcataaatgacaaggagaaaataaagtctgtaag 2073 Query: 749 agagaaagctgccagtaaccgtgacaagt 777 ||||||||| |||||||| |||||||||| Sbjct: 2074 agagaaagccgccagtaatcgtgacaagt 2102 Score = 153 bits (77), Expect = 4e-33 Identities = 173/205 (84%) Strand = Plus / Plus Query: 780 gttgggttatcatcaacagggtcaacatatagatcaagctcagcctctgtaggtagcaac 839 |||||| ||||||| |||||| |||||||| |||||||| || || | ||||||||| Sbjct: 2211 gttgggctatcatcgacagggataacatataagtcaagctctgcttcatttggtagcaac 2270 Query: 840 tacagttcaggtgaacgttatggcagttttggtggaacaagggaggctgattcgttcagt 899 || ||||| |||||||||||||| |||||| |||| |||||||| | |||||| | | || Sbjct: 2271 tatagttctggtgaacgttatgggagttttagtggtacaagggaaggtgattcatacggt 2330 Query: 900 aacagttacagggacaaagaacctgttaaaacctcttcaagtaatactggcaggcgcaaa 959 ||||||| ||||| ||||||||||||||| ||||| ||||| |||||||||| | ||| Sbjct: 2331 gacagttatagggataaagaacctgttaaatcctctccaagttatactggcagccagaaa 2390 Query: 960 tctggcagcaagataagaaaggatg 984 |||||||||| ||||| |||||||| Sbjct: 2391 tctggcagcaggataaaaaaggatg 2415 Score = 123 bits (62), Expect = 3e-24 Identities = 77/82 (93%) Strand = Plus / Plus Query: 550 tgacgattattgagtacttgatagcgaatggttctgagcgggcagttgatgacattctcg 609 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 1772 tgacaattattgagtacttaatagccaatggttctgagcgggcagttgatgacattcttg 1831 Query: 610 atcattattcaaagatctcggt 631 |||| ||||||||||||||||| Sbjct: 1832 atcactattcaaagatctcggt 1853 Score = 99.6 bits (50), Expect = 5e-17 Identities = 130/156 (83%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 3739 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 3795 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 3796 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 3855 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 3856 ctataaacagctttgatggatctgatccatttggtg 3891 Score = 85.7 bits (43), Expect = 7e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggt 1082 |||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| Sbjct: 2814 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggt 2872 Score = 81.8 bits (41), Expect = 1e-11 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 3387 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 3446 Query: 1249 ctgcg 1253 ||||| Sbjct: 3447 ctgcg 3451 Score = 77.8 bits (39), Expect = 2e-10 Identities = 152/190 (80%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 1876 caaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgggttcgacg 1935 ||||||||||||||||||| || |||||| | ||||| ||||| ||| |||| || | Sbjct: 4410 caaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgggtctgatg 4469 Query: 1936 ataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcctaggaatgt 1995 |||| || | ||||||||||| ||||||| ||||| | || |||||||||||| Sbjct: 4470 ataaagctctgccctcatggaccatgggt------gcaggaggttccagcctaggaatgt 4523 Query: 1996 ctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaactacaacaagt 2055 | ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||||||||||| Sbjct: 4524 ccggaattccttcatctacacaaagtggtggcattgagagcttagctaactacaacaagt 4583 Query: 2056 atcagtttgg 2065 | |||||||| Sbjct: 4584 accagtttgg 4593 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 336 aagagggaggtcaatctcaaggtgctcaaggtccccgagctcgaacagaaggt 388 ||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 310 aagagggaggtcaatttgaaggtgctcaaggttccagagctcgaacagaaggt 362 Score = 73.8 bits (37), Expect = 3e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 385 aggtacttgacgcgacaagtgatgaaccttggggtccccatggctctgctctttcagagc 444 |||||||||| || ||||| |||||||||||||| || ||||| || |||||||||||| Sbjct: 1005 aggtacttgatgcaacaagcgatgaaccttggggccctcatggtactactctttcagagc 1064 Query: 445 tagctcaggccaccaagaagt 465 || | || ||||||||||||| Sbjct: 1065 tatcacatgccaccaagaagt 1085 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | |||||||| |||||||||| ||||| Sbjct: 3947 tggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttg 4005 Score = 52.0 bits (26), Expect = 0.010 Identities = 65/78 (83%) Strand = Plus / Plus Query: 469 ctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaact 528 |||| ||||||||||| ||| ||||||||||| | ||| || ||||||||| | || | Sbjct: 1520 ctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaat 1579 Query: 529 ggcgtcatgtgtataagg 546 ||||||| |||||||||| Sbjct: 1580 ggcgtcacgtgtataagg 1597 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 4072 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 4117 Score = 42.1 bits (21), Expect = 9.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1107 gtggatcttcttggcccaaacttgatggatgatttccttgacgagcctgcagc 1159 ||||||||| ||| ||||||||| ||||||||||| | || | ||||||||| Sbjct: 3302 gtggatctttttgccccaaacttattggatgatttcatcgatgtgcctgcagc 3354
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 167 bits (84), Expect = 2e-37 Identities = 117/128 (91%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 30309579 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 30309638 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 30309639 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 30309698 Query: 1868 aactggac 1875 |||||||| Sbjct: 30309699 aactggac 30309706 Score = 153 bits (77), Expect = 4e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 629 ggttctttcgagttttgagtttgtggaacctaatggaaaagactctggaataaatgtgag 688 ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||| Sbjct: 30307355 ggttctttcaagttttgaatatgtggaacctaatggaaaagatgctggaataaatgtgag 30307414 Query: 689 gaagaaagtggaaactctggtgggaatcatcaatgataaggagagaataaaggctgtgag 748 |||||||| |||||| | ||||| |||| ||||| ||||||| ||||||| |||| || Sbjct: 30307415 aaagaaagtcgaaactatattgggactcataaatgacaaggagaaaataaagtctgtaag 30307474 Query: 749 agagaaagctgccagtaaccgtgacaagt 777 ||||||||| |||||||| |||||||||| Sbjct: 30307475 agagaaagccgccagtaatcgtgacaagt 30307503 Score = 153 bits (77), Expect = 4e-33 Identities = 173/205 (84%) Strand = Plus / Plus Query: 780 gttgggttatcatcaacagggtcaacatatagatcaagctcagcctctgtaggtagcaac 839 |||||| ||||||| |||||| |||||||| |||||||| || || | ||||||||| Sbjct: 30307612 gttgggctatcatcgacagggataacatataagtcaagctctgcttcatttggtagcaac 30307671 Query: 840 tacagttcaggtgaacgttatggcagttttggtggaacaagggaggctgattcgttcagt 899 || ||||| |||||||||||||| |||||| |||| |||||||| | |||||| | | || Sbjct: 30307672 tatagttctggtgaacgttatgggagttttagtggtacaagggaaggtgattcatacggt 30307731 Query: 900 aacagttacagggacaaagaacctgttaaaacctcttcaagtaatactggcaggcgcaaa 959 ||||||| ||||| ||||||||||||||| ||||| ||||| |||||||||| | ||| Sbjct: 30307732 gacagttatagggataaagaacctgttaaatcctctccaagttatactggcagccagaaa 30307791 Query: 960 tctggcagcaagataagaaaggatg 984 |||||||||| ||||| |||||||| Sbjct: 30307792 tctggcagcaggataaaaaaggatg 30307816 Score = 123 bits (62), Expect = 3e-24 Identities = 77/82 (93%) Strand = Plus / Plus Query: 550 tgacgattattgagtacttgatagcgaatggttctgagcgggcagttgatgacattctcg 609 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 30307173 tgacaattattgagtacttaatagccaatggttctgagcgggcagttgatgacattcttg 30307232 Query: 610 atcattattcaaagatctcggt 631 |||| ||||||||||||||||| Sbjct: 30307233 atcactattcaaagatctcggt 30307254 Score = 99.6 bits (50), Expect = 5e-17 Identities = 130/156 (83%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 30309140 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 30309196 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 30309197 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 30309256 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 30309257 ctataaacagctttgatggatctgatccatttggtg 30309292 Score = 85.7 bits (43), Expect = 7e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggt 1082 |||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| Sbjct: 30308215 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggt 30308273 Score = 81.8 bits (41), Expect = 1e-11 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 30308788 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 30308847 Query: 1249 ctgcg 1253 ||||| Sbjct: 30308848 ctgcg 30308852 Score = 77.8 bits (39), Expect = 2e-10 Identities = 152/190 (80%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 1876 caaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgggttcgacg 1935 ||||||||||||||||||| || |||||| | ||||| ||||| ||| |||| || | Sbjct: 30309811 caaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgggtctgatg 30309870 Query: 1936 ataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcctaggaatgt 1995 |||| || | ||||||||||| ||||||| ||||| | || |||||||||||| Sbjct: 30309871 ataaagctctgccctcatggaccatgggt------gcaggaggttccagcctaggaatgt 30309924 Query: 1996 ctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaactacaacaagt 2055 | ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||||||||||| Sbjct: 30309925 ccggaattccttcatctacacaaagtggtggcattgagagcttagctaactacaacaagt 30309984 Query: 2056 atcagtttgg 2065 | |||||||| Sbjct: 30309985 accagtttgg 30309994 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 336 aagagggaggtcaatctcaaggtgctcaaggtccccgagctcgaacagaaggt 388 ||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 30305711 aagagggaggtcaatttgaaggtgctcaaggttccagagctcgaacagaaggt 30305763 Score = 73.8 bits (37), Expect = 3e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 385 aggtacttgacgcgacaagtgatgaaccttggggtccccatggctctgctctttcagagc 444 |||||||||| || ||||| |||||||||||||| || ||||| || |||||||||||| Sbjct: 30306406 aggtacttgatgcaacaagcgatgaaccttggggccctcatggtactactctttcagagc 30306465 Query: 445 tagctcaggccaccaagaagt 465 || | || ||||||||||||| Sbjct: 30306466 tatcacatgccaccaagaagt 30306486 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | |||||||| |||||||||| ||||| Sbjct: 30309348 tggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttg 30309406 Score = 52.0 bits (26), Expect = 0.010 Identities = 65/78 (83%) Strand = Plus / Plus Query: 469 ctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaact 528 |||| ||||||||||| ||| ||||||||||| | ||| || ||||||||| | || | Sbjct: 30306921 ctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaat 30306980 Query: 529 ggcgtcatgtgtataagg 546 ||||||| |||||||||| Sbjct: 30306981 ggcgtcacgtgtataagg 30306998 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 30309473 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 30309518 Score = 42.1 bits (21), Expect = 9.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1107 gtggatcttcttggcccaaacttgatggatgatttccttgacgagcctgcagc 1159 ||||||||| ||| ||||||||| ||||||||||| | || | ||||||||| Sbjct: 30308703 gtggatctttttgccccaaacttattggatgatttcatcgatgtgcctgcagc 30308755
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 167 bits (84), Expect = 2e-37 Identities = 117/128 (91%) Strand = Plus / Plus Query: 1748 tggaagggcagaccaaacacctttggcagctcccaagtccaacaccaagaaagaaaattt 1807 ||||||| || ||||| ||||| |||| ||||||||||| | ||||||||||||||||| Sbjct: 59475 tggaaggacaaaccaagcacctctggcggctcccaagtcagataccaagaaagaaaattt 59534 Query: 1808 tcaggtcaaatctggcatatgggctgactctttgagccgtggattgattgatctgaacat 1867 ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 59535 tcaggtcaagtctggcatatgggctgactcattgagccgtggactgattgatctgaacat 59594 Query: 1868 aactggac 1875 |||||||| Sbjct: 59595 aactggac 59602 Score = 153 bits (77), Expect = 4e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 629 ggttctttcgagttttgagtttgtggaacctaatggaaaagactctggaataaatgtgag 688 ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||| Sbjct: 57251 ggttctttcaagttttgaatatgtggaacctaatggaaaagatgctggaataaatgtgag 57310 Query: 689 gaagaaagtggaaactctggtgggaatcatcaatgataaggagagaataaaggctgtgag 748 |||||||| |||||| | ||||| |||| ||||| ||||||| ||||||| |||| || Sbjct: 57311 aaagaaagtcgaaactatattgggactcataaatgacaaggagaaaataaagtctgtaag 57370 Query: 749 agagaaagctgccagtaaccgtgacaagt 777 ||||||||| |||||||| |||||||||| Sbjct: 57371 agagaaagccgccagtaatcgtgacaagt 57399 Score = 153 bits (77), Expect = 4e-33 Identities = 173/205 (84%) Strand = Plus / Plus Query: 780 gttgggttatcatcaacagggtcaacatatagatcaagctcagcctctgtaggtagcaac 839 |||||| ||||||| |||||| |||||||| |||||||| || || | ||||||||| Sbjct: 57508 gttgggctatcatcgacagggataacatataagtcaagctctgcttcatttggtagcaac 57567 Query: 840 tacagttcaggtgaacgttatggcagttttggtggaacaagggaggctgattcgttcagt 899 || ||||| |||||||||||||| |||||| |||| |||||||| | |||||| | | || Sbjct: 57568 tatagttctggtgaacgttatgggagttttagtggtacaagggaaggtgattcatacggt 57627 Query: 900 aacagttacagggacaaagaacctgttaaaacctcttcaagtaatactggcaggcgcaaa 959 ||||||| ||||| ||||||||||||||| ||||| ||||| |||||||||| | ||| Sbjct: 57628 gacagttatagggataaagaacctgttaaatcctctccaagttatactggcagccagaaa 57687 Query: 960 tctggcagcaagataagaaaggatg 984 |||||||||| ||||| |||||||| Sbjct: 57688 tctggcagcaggataaaaaaggatg 57712 Score = 123 bits (62), Expect = 3e-24 Identities = 77/82 (93%) Strand = Plus / Plus Query: 550 tgacgattattgagtacttgatagcgaatggttctgagcgggcagttgatgacattctcg 609 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 57069 tgacaattattgagtacttaatagccaatggttctgagcgggcagttgatgacattcttg 57128 Query: 610 atcattattcaaagatctcggt 631 |||| ||||||||||||||||| Sbjct: 57129 atcactattcaaagatctcggt 57150 Score = 99.6 bits (50), Expect = 5e-17 Identities = 130/156 (83%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1309 cagcctttccaccacagactgggtttatcccaccaccaacttctgggacaccttctaatg 1368 ||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| | | Sbjct: 59036 cagcctttccaccacagacagggtttattccaccaccaagttctgggaca---tctgaag 59092 Query: 1369 ctaatacttccgtgtccaagaacacagtacccgaaccatttgatcctttcggtgatattc 1428 | ||||||||| ||| ||||||||| || ||||| ||||||||||| |||| ||||| Sbjct: 59093 caaatacttccacgtctaagaacacaactcctgaaccttttgatccttttggtgctattc 59152 Query: 1429 ctttaagcagtttcgggggatctgacccatttggtg 1464 || ||| ||| || | |||||||| |||||||||| Sbjct: 59153 ctataaacagctttgatggatctgatccatttggtg 59188 Score = 85.7 bits (43), Expect = 7e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 1024 caaaaggcaatgaggatgaattcgatgactttgatcctcgtggatcttcttcaaatggt 1082 |||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| Sbjct: 58111 caaaaggcaatgaggacgattttgatgattttgatcctcgtggatcttcttcaaatggt 58169 Score = 81.8 bits (41), Expect = 1e-11 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1189 ctcaggttgatctgtttgctgatgcagatttccaatcggcaaacccaggtgccgaaacag 1248 ||||||||||||||||||||||||||||||||||||| |||| ||| || | ||||||| Sbjct: 58684 ctcaggttgatctgtttgctgatgcagatttccaatcagcaataccaagtacagaaacag 58743 Query: 1249 ctgcg 1253 ||||| Sbjct: 58744 ctgcg 58748 Score = 77.8 bits (39), Expect = 2e-10 Identities = 152/190 (80%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 1876 caaagaaggtgaacttagcagatgttggggtcgtcggcggccttagtgatgggttcgacg 1935 ||||||||||||||||||| || |||||| | ||||| ||||| ||| |||| || | Sbjct: 59707 caaagaaggtgaacttagccgacgttgggattgtcggtggcctcgatgacgggtctgatg 59766 Query: 1936 ataaggcacagccctcatggaacatgggtatgggtgcaggggtatctggcctaggaatgt 1995 |||| || | ||||||||||| ||||||| ||||| | || |||||||||||| Sbjct: 59767 ataaagctctgccctcatggaccatgggt------gcaggaggttccagcctaggaatgt 59820 Query: 1996 ctggagttcctccttctacgcaaggcggtggcatcgagagcttggcaaactacaacaagt 2055 | ||| ||||| | ||||| ||| | |||||||| |||||||| || ||||||||||||| Sbjct: 59821 ccggaattccttcatctacacaaagtggtggcattgagagcttagctaactacaacaagt 59880 Query: 2056 atcagtttgg 2065 | |||||||| Sbjct: 59881 accagtttgg 59890 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 336 aagagggaggtcaatctcaaggtgctcaaggtccccgagctcgaacagaaggt 388 ||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 55607 aagagggaggtcaatttgaaggtgctcaaggttccagagctcgaacagaaggt 55659 Score = 73.8 bits (37), Expect = 3e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 385 aggtacttgacgcgacaagtgatgaaccttggggtccccatggctctgctctttcagagc 444 |||||||||| || ||||| |||||||||||||| || ||||| || |||||||||||| Sbjct: 56302 aggtacttgatgcaacaagcgatgaaccttggggccctcatggtactactctttcagagc 56361 Query: 445 tagctcaggccaccaagaagt 465 || | || ||||||||||||| Sbjct: 56362 tatcacatgccaccaagaagt 56382 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1511 tggaaatatcagcacgtcaagtcagaaccttgaggcagcatcggactttggtgcctttg 1569 ||||||||||||||| |||||||||||| | | |||||||| |||||||||| ||||| Sbjct: 59244 tggaaatatcagcacaccaagtcagaaccctcaagcagcatctgactttggtggctttg 59302 Score = 52.0 bits (26), Expect = 0.010 Identities = 65/78 (83%) Strand = Plus / Plus Query: 469 ctgagtgtcagatggtgatgggtgtcctctgggccaggttgggtgagcgaggtgcaaact 528 |||| ||||||||||| ||| ||||||||||| | ||| || ||||||||| | || | Sbjct: 56817 ctgaatgtcagatggtaatgagtgtcctctggactaggctgtctgagcgaggctcgaaat 56876 Query: 529 ggcgtcatgtgtataagg 546 ||||||| |||||||||| Sbjct: 56877 ggcgtcacgtgtataagg 56894 Score = 44.1 bits (22), Expect = 2.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1645 cacctttggcagctcccaaaactgatgcgtctgattttggtgcctt 1690 |||||||||||| ||| || ||||||| || |||||||||||||| Sbjct: 59369 cacctttggcagatccaaaggctgatgcatccgattttggtgcctt 59414 Score = 42.1 bits (21), Expect = 9.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1107 gtggatcttcttggcccaaacttgatggatgatttccttgacgagcctgcagc 1159 ||||||||| ||| ||||||||| ||||||||||| | || | ||||||||| Sbjct: 58599 gtggatctttttgccccaaacttattggatgatttcatcgatgtgcctgcagc 58651
>gb|AY104433.1| Zea mays PCO091058 mRNA sequence Length = 652 Score = 147 bits (74), Expect = 2e-31 Identities = 146/170 (85%) Strand = Plus / Plus Query: 1794 aagaaagaaaattttcaggtcaaatctggcatatgggctgactctttgagccgtggattg 1853 |||||||| |||||||||||||| || ||||||||||| ||||| ||||||| |||||| Sbjct: 199 aagaaagacaattttcaggtcaagtccggcatatgggcagactcgctgagccggggattg 258 Query: 1854 attgatctgaacataactggaccaaagaaggtgaacttagcagatgttggggtcgtcggc 1913 ||||||||||||||||||| ||| |||||||||||| |||| ||| |||| ||||||| Sbjct: 259 attgatctgaacataactgcaccgaagaaggtgaacctagctgatattggcatcgtcggt 318 Query: 1914 ggccttagtgatgggttcgacgataaggcacagccctcatggaacatggg 1963 |||||| | ||||||| ||| || ||||| | |||||| |||| |||||| Sbjct: 319 ggccttggcgatgggtccgatgagaaggccctgccctcttggaccatggg 368 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 2022 ggtggcatcgagagcttggcaaactacaacaagtatca 2059 |||||||||||||||||||| |||||||||||| |||| Sbjct: 421 ggtggcatcgagagcttggccaactacaacaagcatca 458
>ref|NM_001050725.1| Oryza sativa (japonica cultivar-group) Os01g0738600 (Os01g0738600) mRNA, complete cds Length = 2432 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 1794 aagaaagaaaattttcaggtcaaatctggcatatgggctgactctttgagccgtggattg 1853 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1831 aagaaagaaacttttcaggtcaaatctggcatatgggctgactctttgagccgaggattg 1890 Query: 1854 attgatctgaacataact 1871 |||||| |||| |||||| Sbjct: 1891 attgatttgaatataact 1908 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 293 catggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatct 352 ||||||||||| ||||| |||| |||||||| ||||||| | ||||||||| ||||| Sbjct: 213 catggatttcaggaaggtgctcgaccagaccgtccgggagataaggagggaggtaaatct 272 Query: 353 caaggtgctcaaggtccccgagctcgaacagaaggtacttga 394 |||||||||||||| || || |||| |||||||| ||||| Sbjct: 273 taaggtgctcaaggtgccggaaatcgagcagaaggttcttga 314
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 1794 aagaaagaaaattttcaggtcaaatctggcatatgggctgactctttgagccgtggattg 1853 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 30829078 aagaaagaaacttttcaggtcaaatctggcatatgggctgactctttgagccgaggattg 30829137 Query: 1854 attgatctgaacataact 1871 |||||| |||| |||||| Sbjct: 30829138 attgatttgaatataact 30829155 Score = 46.1 bits (23), Expect = 0.60 Identities = 44/51 (86%) Strand = Plus / Plus Query: 338 gagggaggtcaatctcaaggtgctcaaggtccccgagctcgaacagaaggt 388 ||||||||| ||||| |||||||||||||| || || |||| |||||||| Sbjct: 30826406 gagggaggtaaatcttaaggtgctcaaggtgccggaaatcgagcagaaggt 30826456
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0021A09 Length = 127973 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 1794 aagaaagaaaattttcaggtcaaatctggcatatgggctgactctttgagccgtggattg 1853 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 118353 aagaaagaaacttttcaggtcaaatctggcatatgggctgactctttgagccgaggattg 118412 Query: 1854 attgatctgaacataact 1871 |||||| |||| |||||| Sbjct: 118413 attgatttgaatataact 118430 Score = 46.1 bits (23), Expect = 0.60 Identities = 44/51 (86%) Strand = Plus / Plus Query: 338 gagggaggtcaatctcaaggtgctcaaggtccccgagctcgaacagaaggt 388 ||||||||| ||||| |||||||||||||| || || |||| |||||||| Sbjct: 115681 gagggaggtaaatcttaaggtgctcaaggtgccggaaatcgagcagaaggt 115731
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 1794 aagaaagaaaattttcaggtcaaatctggcatatgggctgactctttgagccgtggattg 1853 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 29445 aagaaagaaacttttcaggtcaaatctggcatatgggctgactctttgagccgaggattg 29504 Query: 1854 attgatctgaacataact 1871 |||||| |||| |||||| Sbjct: 29505 attgatttgaatataact 29522 Score = 46.1 bits (23), Expect = 0.60 Identities = 44/51 (86%) Strand = Plus / Plus Query: 338 gagggaggtcaatctcaaggtgctcaaggtccccgagctcgaacagaaggt 388 ||||||||| ||||| |||||||||||||| || || |||| |||||||| Sbjct: 26773 gagggaggtaaatcttaaggtgctcaaggtgccggaaatcgagcagaaggt 26823
>dbj|AK073479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044K11, full insert sequence Length = 2434 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 1794 aagaaagaaaattttcaggtcaaatctggcatatgggctgactctttgagccgtggattg 1853 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1831 aagaaagaaacttttcaggtcaaatctggcatatgggctgactctttgagccgaggattg 1890 Query: 1854 attgatctgaacataact 1871 |||||| |||| |||||| Sbjct: 1891 attgatttgaatataact 1908 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 293 catggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatct 352 ||||||||||| ||||| |||| |||||||| ||||||| | ||||||||| ||||| Sbjct: 213 catggatttcaggaaggtgctcgaccagaccgtccgggagataaggagggaggtaaatct 272 Query: 353 caaggtgctcaaggtccccgagctcgaacagaaggtacttga 394 |||||||||||||| || || |||| |||||||| ||||| Sbjct: 273 taaggtgctcaaggtgccggaaatcgagcagaaggttcttga 314
>dbj|AK227905.1| Arabidopsis thaliana mRNA for clathrin binding protein - like, complete cds, clone: RAFL14-47-E05 Length = 2086 Score = 71.9 bits (36), Expect = 1e-08 Identities = 159/200 (79%) Strand = Plus / Plus Query: 294 atggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatctc 353 |||||||||||||||| ||||||||| || || | ||||| || |||||||| ||||| Sbjct: 140 atggatttcatgaaggtcttcgatcaaactgttcgagagataaaaagggaggtgaatctg 199 Query: 354 aaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgatgaacct 413 || || | |||||||| ||| | || || |||||| | || || ||| | |||| ||| Sbjct: 200 aaagttttgaaggtccctgagatggagcaaaaggtattggatgctacagataatgagcct 259 Query: 414 tggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtactctgag 473 |||||||||||||| |||| | ||||| ||||||||||||| ||||| | ||| ||| Sbjct: 260 tggggtccccatggtactgcattggcagagatagctcaggccacgaagaaattctcggag 319 Query: 474 tgtcagatggtgatgggtgt 493 || |||||||| ||| |||| Sbjct: 320 tgccagatggttatgagtgt 339 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 1536 tgagccgtggactgattgatctcaatataactg 1568
>ref|NM_121209.4| Arabidopsis thaliana binding (AT5G11710) mRNA, complete cds Length = 2146 Score = 71.9 bits (36), Expect = 1e-08 Identities = 159/200 (79%) Strand = Plus / Plus Query: 294 atggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatctc 353 |||||||||||||||| ||||||||| || || | ||||| || |||||||| ||||| Sbjct: 118 atggatttcatgaaggtcttcgatcaaactgttcgagagataaaaagggaggtgaatctg 177 Query: 354 aaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgatgaacct 413 || || | |||||||| ||| | || || |||||| | || || ||| | |||| ||| Sbjct: 178 aaagttttgaaggtccctgagatggagcaaaaggtattggatgctacagataatgagcct 237 Query: 414 tggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtactctgag 473 |||||||||||||| |||| | ||||| ||||||||||||| ||||| | ||| ||| Sbjct: 238 tggggtccccatggtactgcattggcagagatagctcaggccacgaagaaattctcggag 297 Query: 474 tgtcagatggtgatgggtgt 493 || |||||||| ||| |||| Sbjct: 298 tgccagatggttatgagtgt 317 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 1514 tgagccgtggactgattgatctcaatataactg 1546
>gb|AY096605.1| Arabidopsis thaliana putative clathrin binding protein (At5g11710) mRNA, complete cds Length = 1714 Score = 71.9 bits (36), Expect = 1e-08 Identities = 159/200 (79%) Strand = Plus / Plus Query: 294 atggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatctc 353 |||||||||||||||| ||||||||| || || | ||||| || |||||||| ||||| Sbjct: 1 atggatttcatgaaggtcttcgatcaaactgttcgagagataaaaagggaggtgaatctg 60 Query: 354 aaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgatgaacct 413 || || | |||||||| ||| | || || |||||| | || || ||| | |||| ||| Sbjct: 61 aaagttttgaaggtccctgagatggagcaaaaggtattggatgctacagataatgagcct 120 Query: 414 tggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtactctgag 473 |||||||||||||| |||| | ||||| ||||||||||||| ||||| | ||| ||| Sbjct: 121 tggggtccccatggtactgcattggcagagatagctcaggccacgaagaaattctcggag 180 Query: 474 tgtcagatggtgatgggtgt 493 || |||||||| ||| |||| Sbjct: 181 tgccagatggttatgagtgt 200 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 1397 tgagccgtggactgattgatctcaatataactg 1429
>gb|AY074304.1| Arabidopsis thaliana putative clathrin binding protein (At5g11710) mRNA, complete cds Length = 2110 Score = 71.9 bits (36), Expect = 1e-08 Identities = 159/200 (79%) Strand = Plus / Plus Query: 294 atggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatctc 353 |||||||||||||||| ||||||||| || || | ||||| || |||||||| ||||| Sbjct: 110 atggatttcatgaaggtcttcgatcaaactgttcgagagataaaaagggaggtgaatctg 169 Query: 354 aaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgatgaacct 413 || || | |||||||| ||| | || || |||||| | || || ||| | |||| ||| Sbjct: 170 aaagttttgaaggtccctgagatggagcaaaaggtattggatgctacagataatgagcct 229 Query: 414 tggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtactctgag 473 |||||||||||||| |||| | ||||| ||||||||||||| ||||| | ||| ||| Sbjct: 230 tggggtccccatggtactgcattggcagagatagctcaggccacgaagaaattctcggag 289 Query: 474 tgtcagatggtgatgggtgt 493 || |||||||| ||| |||| Sbjct: 290 tgccagatggttatgagtgt 309 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 1506 tgagccgtggactgattgatctcaatataactg 1538
>emb|BX832018.1|CNS0A1QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2102 Score = 71.9 bits (36), Expect = 1e-08 Identities = 159/200 (79%) Strand = Plus / Plus Query: 294 atggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatctc 353 |||||||||||||||| ||||||||| || || | ||||| || |||||||| ||||| Sbjct: 118 atggatttcatgaaggtcttcgatcaaactgttcgagagataaaaagggaggtgaatctg 177 Query: 354 aaggtgctcaaggtccccgagctcgaacagaaggtacttgacgcgacaagtgatgaacct 413 || || | |||||||| ||| | || || |||||| | || || ||| | |||| ||| Sbjct: 178 aaagttttgaaggtccctgagatggagcaaaaggtattggatgctacagataatgagcct 237 Query: 414 tggggtccccatggctctgctctttcagagctagctcaggccaccaagaagtactctgag 473 |||||||||||||| |||| | ||||| ||||||||||||| ||||| | ||| ||| Sbjct: 238 tggggtccccatggtactgcattggcagagatagctcaggccacgaagaaattctcggag 297 Query: 474 tgtcagatggtgatgggtgt 493 || |||||||| ||| |||| Sbjct: 298 tgccagatggttatgagtgt 317 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 1508 tgagccgtggactgattgatctcaatataactg 1540
>dbj|AK120616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152B11, full insert sequence Length = 835 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 293 catggatttcatgaaggccttcgatcagaccgtaagggagatcaagagggaggtcaatct 352 ||||||||||| ||||| |||| |||||||| ||||||| | ||||||||| ||||| Sbjct: 211 catggatttcaggaaggtgctcgaccagaccgtccgggagataaggagggaggtaaatct 270 Query: 353 caaggtgctcaaggtccccgagctcgaacagaaggtacttga 394 |||||||||||||| || || |||| |||||||| ||||| Sbjct: 271 taaggtgctcaaggtgccggaaatcgagcagaaggttcttga 312
>gb|AC141882.3| Mus musculus BAC clone RP24-177O3 from chromosome 17, complete sequence Length = 173120 Score = 50.1 bits (25), Expect = 0.038 Identities = 28/29 (96%) Strand = Plus / Plus Query: 2302 attcagtcttatggttaatatgtgcacct 2330 ||||||||||||||||||| ||||||||| Sbjct: 78316 attcagtcttatggttaatctgtgcacct 78344
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 50.1 bits (25), Expect = 0.038 Identities = 28/29 (96%) Strand = Plus / Minus Query: 2302 attcagtcttatggttaatatgtgcacct 2330 ||||||||||||||||||| ||||||||| Sbjct: 4284 attcagtcttatggttaatctgtgcacct 4256
>gb|AC093817.3| Homo sapiens BAC clone RP11-364P22 from 4, complete sequence Length = 183186 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2062 ttggtggcttcaagtgagctca 2083 |||||||||||||||||||||| Sbjct: 72789 ttggtggcttcaagtgagctca 72810
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2381 tttagttccatattaaaattag 2402 |||||||||||||||||||||| Sbjct: 18617522 tttagttccatattaaaattag 18617543
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1639 atgtagcacctttggcagctcc 1660 |||||||||||||||||||||| Sbjct: 2819827 atgtagcacctttggcagctcc 2819848
>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project) Length = 93205 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 atggatttcatgaaggccttcgatca 319 |||||||||||||||| ||||||||| Sbjct: 51963 atggatttcatgaaggtcttcgatca 51988 Score = 44.1 bits (22), Expect = 2.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 406 atgaaccttggggtccccatggctctgctctttcagagctagctcaggccaccaagaa 463 |||| ||||||||||||||||| |||| | ||||| ||||||||||||| ||||| Sbjct: 52553 atgagccttggggtccccatggtactgcattggcagagatagctcaggccacgaagaa 52610 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 54728 tgagccgtggactgattgatctcaatataactg 54760
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2381 tttagttccatattaaaattag 2402 |||||||||||||||||||||| Sbjct: 69625 tttagttccatattaaaattag 69646
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 aggccgacgacctcgccgtcga 97 |||||||||||||||||||||| Sbjct: 2330132 aggccgacgacctcgccgtcga 2330153
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1476 tctagtgcaccaccaccacctg 1497 |||||||||||||||||||||| Sbjct: 117425 tctagtgcaccaccaccacctg 117404
>gb|AC110298.5| Homo sapiens BAC clone RP11-367N1 from 4, complete sequence Length = 23992 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1076 aaatggtgcagctaatacaaag 1097 |||||||||||||||||||||| Sbjct: 7686 aaatggtgcagctaatacaaag 7665
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 agccttcgacgccgcgccggc 292 ||||||||||||||||||||| Sbjct: 1863807 agccttcgacgccgcgccggc 1863787
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccatcccgtccagacgcagcc 191 ||||||||||||||||||||| Sbjct: 20185146 ccatcccgtccagacgcagcc 20185126
>dbj|AK230200.1| Arabidopsis thaliana mRNA for clathrin binding protein - like, partial cds, clone: RAFL22-96-H11 Length = 1596 Score = 42.1 bits (21), Expect = 9.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1840 tgagccgtggattgattgatctgaacataactg 1872 ||||||||||| |||||||||| || ||||||| Sbjct: 983 tgagccgtggactgattgatctcaatataactg 1015
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccatcccgtccagacgcagcc 191 ||||||||||||||||||||| Sbjct: 117646 ccatcccgtccagacgcagcc 117626
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 561 gagtacttgatagcgaatggttctg 585 |||||||||||||||||| |||||| Sbjct: 3829172 gagtacttgatagcgaattgttctg 3829148
>gb|AC155721.7| Mus musculus 6 BAC RP24-186O21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180652 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1431 ttaagcagtttcgggggatctgacc 1455 |||||||||||| |||||||||||| Sbjct: 5236 ttaagcagtttctggggatctgacc 5260
>gb|AC110015.5| Homo sapiens chromosome 18, clone RP11-104H13, complete sequence Length = 168389 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1605 gacttttcttccactggcaattttg 1629 ||||||||| ||||||||||||||| Sbjct: 14703 gacttttctgccactggcaattttg 14727
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1896 gatgttggggtcgtcggcggc 1916 ||||||||||||||||||||| Sbjct: 35029709 gatgttggggtcgtcggcggc 35029689
>emb|AL451124.13| Human DNA sequence from clone RP11-20P5 on chromosome 9 Contains the 3' end of a variant of a novel gene (FLJ31810) and a novel pseudogene (FLJ37424), complete sequence Length = 164291 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1780 ccaagtccaacaccaagaaagaaaa 1804 |||||||||||| |||||||||||| Sbjct: 71333 ccaagtccaacaacaagaaagaaaa 71309
>gb|AC012400.11| Homo sapiens chromosome 8, clone RP11-120I21, complete sequence Length = 182378 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1492 cacctgtacacagctccactg 1512 ||||||||||||||||||||| Sbjct: 156785 cacctgtacacagctccactg 156805
>emb|AL050327.6|HSJ907D15 Human DNA sequence from clone RP5-907D15 on chromosome 20q13.2-13.33 Contains the 5' end of the STX16 gene for syntaxin 16, the 3' end of a novel gene (LOC149773) and a CpG island, complete sequence Length = 123368 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1253 gcatcaggatgtccaggaaac 1273 ||||||||||||||||||||| Sbjct: 63892 gcatcaggatgtccaggaaac 63872
>dbj|AB115703.1| Oryzias curvinotus OcGCS-alpha1 mRMA for soluble guanylyl cyclase alpha1 subunit, complete cds Length = 2465 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2103 cctggtgtttgttactttttg 2123 ||||||||||||||||||||| Sbjct: 2106 cctggtgtttgttactttttg 2126
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 gcaggccgacgacctcgccgtcgag 98 ||||||||||||||||| ||||||| Sbjct: 142948 gcaggccgacgacctcgtcgtcgag 142972
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gccttcgacgccgcgccggcc 293 ||||||||||||||||||||| Sbjct: 161299 gccttcgacgccgcgccggcc 161279
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gccttcgacgccgcgccggcc 293 ||||||||||||||||||||| Sbjct: 84370 gccttcgacgccgcgccggcc 84350
>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR30J04, complete sequence Length = 177277 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccatcccgtccagacgcagcc 191 ||||||||||||||||||||| Sbjct: 29580 ccatcccgtccagacgcagcc 29560
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccccggccagccttcgacgcc 284 ||||||||||||||||||||| Sbjct: 905059 ccccggccagccttcgacgcc 905079
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1896 gatgttggggtcgtcggcggc 1916 ||||||||||||||||||||| Sbjct: 75843 gatgttggggtcgtcggcggc 75863
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 676 gaataaatgtgaggaagaaagtgga 700 |||||||||||||||||| |||||| Sbjct: 103595 gaataaatgtgaggaagagagtgga 103571
>dbj|AB000849.1| Oryzias latipes mRNA for soluble guanylyl cyclase alpha subunit, complete cds Length = 2570 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2103 cctggtgtttgttactttttg 2123 ||||||||||||||||||||| Sbjct: 2146 cctggtgtttgttactttttg 2166
>dbj|AB022280.1| Oryzias latipes gene for soluble guanylyl cyclase alpha subunit, complete cds Length = 16504 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2103 cctggtgtttgttactttttg 2123 ||||||||||||||||||||| Sbjct: 15325 cctggtgtttgttactttttg 15345
>ref|NM_001032683.1| Takifugu rubripes soluble guanylyl cyclase alpha1 subunit (FrGCS-alpha1), mRNA dbj|AB062171.1| Takifugu rubripes FrGCS-alpha1 mRNA for soluble guanylyl cyclase alpha1 subunit, complete cds Length = 3022 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2103 cctggtgtttgttactttttg 2123 ||||||||||||||||||||| Sbjct: 2194 cctggtgtttgttactttttg 2214
>dbj|AB062169.1| Takifugu rubripes FrGCS-alpha1 gene for soluble guanylyl cyclase alpha1 subunit, complete cds Length = 10941 Score = 42.1 bits (21), Expect = 9.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2103 cctggtgtttgttactttttg 2123 ||||||||||||||||||||| Sbjct: 10113 cctggtgtttgttactttttg 10133
>gb|AC153908.2| Mus musculus 6 BAC RP23-190K19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201588 Score = 42.1 bits (21), Expect = 9.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1431 ttaagcagtttcgggggatctgacc 1455 |||||||||||| |||||||||||| Sbjct: 61200 ttaagcagtttctggggatctgacc 61224 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 415,843,898 Number of extensions: 22891194 Number of successful extensions: 110758 Number of sequences better than 10.0: 55 Number of HSP's gapped: 110727 Number of HSP's successfully gapped: 147 Length of query: 2437 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2414 Effective length of database: 18,503,978,556 Effective search space: 44668604234184 Effective search space used: 44668604234184 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
