ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf108a03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein Length = 974 Score = 896 bits (452), Expect = 0.0 Identities = 467/472 (98%) Strand = Plus / Plus Query: 169 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagtt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagtt 135 Query: 229 ggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcagg 288 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136 ggcggtgaagagcaagggggcggagaagccggccgccaaggggaagaagggaaaggcagg 195 Query: 289 caaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagtt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 caaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagtt 255 Query: 349 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 315 Query: 409 ggccggtgagaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 ggccggtgagaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggc 375 Query: 469 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcac 528 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 376 caacaagctcaagggcgagtacaacaaggccattgcttcctacaacaagggcgagagcac 435 Query: 529 tgctgctgccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatc 588 | |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 436 tactgctgccccaaagaaggcctcttccaaggaggtagaggaggaagatgaggaggaatc 495 Query: 589 cgacaagtccaagtcggagatcaatgacgacgatgacgatgagggtagcgat 640 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 cgacaagtccaagtcggagatcaatgacgacgatgacgatgagggtagcgat 547 Score = 504 bits (254), Expect = e-139 Identities = 269/274 (98%) Strand = Plus / Plus Query: 639 ataaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgtt 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 ataaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgtt 707 Query: 699 gttttacctttttcatgtcgtccgtccatccgtcctgctataacggatagcgctccctgt 758 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 708 gttttacctttttcatgtcgtccgtccatccgtcctgcaataacggatagcgctccctgt 767 Query: 759 tggcgcccccgccggcggggtgctccttgcggtgttagggtgtatgtcctccgccgcggg 818 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 768 tggcccccccgccggcggggtgctccttgcggtgttagggcgtatgtcctccgccgcggg 827 Query: 819 tgtgcccctgcctgtacctacctagatggtcactctttccgtccattgtcatcggctaac 878 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 828 tgtgcccctgcctgtacctacctagatggtcactctttccgtccattgttatcggctaac 887 Query: 879 attgtgataatatcagtttgggtaatgttagatt 912 |||||||||| ||||||||||||||||||||||| Sbjct: 888 attgtgataaaatcagtttgggtaatgttagatt 921 Score = 121 bits (61), Expect = 5e-24 Identities = 61/61 (100%) Strand = Plus / Plus Query: 27 ctccttccttccttcctttccccaaaccagaccaggagcgccctccccaccccaacccag 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 ctccttccttccttcctttccccaaaccagaccaggagcgccctccccaccccaacccag 78 Query: 87 g 87 | Sbjct: 79 g 79
>gb|L28094.1|BLYCDNA Barley mRNA sequence Length = 942 Score = 860 bits (434), Expect = 0.0 Identities = 467/477 (97%), Gaps = 2/477 (0%) Strand = Plus / Plus Query: 169 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagtt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagtt 144 Query: 229 ggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcagg 288 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 145 ggcggtgaagagcaagggggcggagaagccggccgccaaggggaagaagggaaaggcagg 204 Query: 289 caaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagtt 348 ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| Sbjct: 205 caaggaccccaacaagcccaagaggaaccccagc--cttcttcgtctccatgggcgagtt 262 Query: 349 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 408 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 263 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgcccccgtcggcaaagc 322 Query: 409 ggccggtgagaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggc 468 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 323 ggccggtgagaggtggaagagcttgagcgaacccgaaaaggccccctttgttgccaaggc 382 Query: 469 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcac 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcac 442 Query: 529 tgctgctgccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatc 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tgctgctgccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatc 502 Query: 589 cgacaagtccaagtcggagatcaatgacgacgatgacgatgagggtagcgataagga 645 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 503 cgacaagtccaagtcggagatcaatgacgacgatgacgatgagggtagcgatgagga 559 Score = 511 bits (258), Expect = e-141 Identities = 268/270 (99%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 639 ataaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgtt 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 ataaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgtt 714 Query: 699 gttttacctttttcatgtcgtccgtccatccgtcctgctataacggatagcgctccctgt 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gttttacctttttcatgtcgtccgtccatccgtcctgctataacggatagcgctccctgt 774 Query: 759 tggcgcccccgccggcggggtgctccttgcggtgttagggtgtatgtcctccgccgcggg 818 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 775 tggcgcccc-gccggcggggtgctccttgcggtgttagggtgtatgtcctccgccgctgg 833 Query: 819 tgtgcccctgcctgtacctacctagatggtcactctttccgtccattgtcatcggctaac 878 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 tgtgcccctgcctgtacctacctagatggtcactctttccgtccattgtcatcggctaac 893 Query: 879 attgtgataatatcagtttgggtaatgtta 908 |||||||||||||||||||||||||||||| Sbjct: 894 attgtgataatatcagtttgggtaatgtta 923 Score = 111 bits (56), Expect = 5e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 29 ccttccttccttcctttccccaaaccagaccaggagcgccctccccaccccaaccc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29 ccttccttccttcctttccccaaaccagaccaggagcgccctccccaccccaaccc 84
>dbj|AB272226.1| Triticum aestivum HMGB1 mRNA for high mobility globular protein, complete cds Length = 765 Score = 797 bits (402), Expect = 0.0 Identities = 461/480 (96%), Gaps = 3/480 (0%) Strand = Plus / Plus Query: 169 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagtt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 41 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacgccaagtt 100 Query: 229 ggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcagg 288 ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 101 ggcggtgaagagcaagggggcggagaagccggccgccaaggggaagaagggcaaggccgg 160 Query: 289 caaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagtt 348 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 161 caaggaccccaacaagcccaagagggcgccatccgccttcttcgtcttcatgggcgagtt 220 Query: 349 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 280 Query: 409 ggccggtgagaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggc 468 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| Sbjct: 281 ggccggtgagaggtggaagagcttgagcgaatcggaaaaggccccctatgtggccaaggc 340 Query: 469 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagc-- 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcgc 400 Query: 527 -actgctgctgccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggagga 585 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 401 tgctgctgctgccccaaagaaggctgcggccaaggaggtagaggaggaagatgaggagga 460 Query: 586 atccgacaagtccaagtcggagatcaatgacgacgatgacgatgagggtagcgataagga 645 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 461 atctgacaagtccaagtcggagatcaatgacgacgatgacgatgagggcagcgatgagga 520 Score = 133 bits (67), Expect = 1e-27 Identities = 76/79 (96%) Strand = Plus / Plus Query: 639 ataaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgtt 698 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 626 ataaggagcctatccatctccactagaattatcccaagtttcacttcacatcgtgatgtt 685 Query: 699 gttttacctttttcatgtc 717 |||||||||||||| |||| Sbjct: 686 gttttacctttttcctgtc 704 Score = 81.8 bits (41), Expect = 4e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 730 gtcctgctataacggatagcgctccctgttggcgcccccgccggc 774 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 708 gtcctgctataacggatagcgctccctgttggcgccgccgccggc 752
>emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group protein (HMGW) Length = 923 Score = 797 bits (402), Expect = 0.0 Identities = 461/480 (96%), Gaps = 3/480 (0%) Strand = Plus / Plus Query: 169 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagtt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 64 caggaaaccagccatgaagggggccaaatccaagggcgccgccaaggccgacgccaagtt 123 Query: 229 ggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcagg 288 ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 124 ggcggtgaagagcaagggggcggagaagccggccgccaaggggaagaagggcaaggccgg 183 Query: 289 caaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagtt 348 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184 caaggaccccaacaagcccaagagggcgccatccgccttcttcgtcttcatgggcgagtt 243 Query: 349 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ccgcgaggagttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagc 303 Query: 409 ggccggtgagaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggc 468 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| Sbjct: 304 ggccggtgagaggtggaagagcttgagcgaatcggaaaaggccccctatgtggccaaggc 363 Query: 469 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagc-- 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 caacaagctcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcgc 423 Query: 527 -actgctgctgccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggagga 585 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 424 tgctgctgctgccccaaagaaggctgcggccaaggaggtagaggaggaagatgaggagga 483 Query: 586 atccgacaagtccaagtcggagatcaatgacgacgatgacgatgagggtagcgataagga 645 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 484 atctgacaagtccaagtcggagatcaatgacgacgatgacgatgagggcagcgatgagga 543 Score = 180 bits (91), Expect = 6e-42 Identities = 165/184 (89%), Gaps = 8/184 (4%) Strand = Plus / Plus Query: 730 gtcctgctataacggatagcgctccctgttggcgcccccgccggcgggg-tgctccttgc 788 |||||||||||||||||||||||||||||||||||| |||||||| ||| ||| ||| | Sbjct: 731 gtcctgctataacggatagcgctccctgttggcgccgccgccggccgggatgc-cctagt 789 Query: 789 ggtgttagggtgtatgtcctccgccgcgggtgtgcccctgcctgtacctacctagatggt 848 |||| ||||||||||||||| ||||||| |||||||||| |||||| |||||||| Sbjct: 790 ggtgg-agggtgtatgtcctcttccgcggg-gtgcccctgcttgtacc----tagatggt 843 Query: 849 cactctttccgtccattgtcatcggctaacattgtgataatatcagtttgggtaatgtta 908 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 844 tactctttccgtccattgtcaccggctaacattgtgataatatcagtctgggtaatgtta 903 Query: 909 gatt 912 |||| Sbjct: 904 gatt 907 Score = 133 bits (67), Expect = 1e-27 Identities = 76/79 (96%) Strand = Plus / Plus Query: 639 ataaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgtt 698 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 649 ataaggagcctatccatctccactagaattatcccaagtttcacttcacatcgtgatgtt 708 Query: 699 gttttacctttttcatgtc 717 |||||||||||||| |||| Sbjct: 709 gttttacctttttcctgtc 727 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 40 tcctttccccaaaccagaccaggagcgccctc 71 |||||||||||| ||||||||||||||||||| Sbjct: 12 tcctttccccaacccagaccaggagcgccctc 43
>gb|AF531431.1| Zea mays nucleosome/chromatin assembly factor group D protein (nfd103) mRNA, complete cds Length = 887 Score = 406 bits (205), Expect = e-110 Identities = 395/458 (86%), Gaps = 9/458 (1%) Strand = Plus / Plus Query: 179 gccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtgaag 238 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 104 gccatgaagggggccaaatccaagggcgccgccaaggccgatgccaagctggcggtgaag 163 Query: 239 agcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacccc 298 ||||||||||||||||| || ||||||||| | ||| || ||||| |||||||||||| Sbjct: 164 agcaagggggcggagaagcc---cgccaagggcaggaaagggaaggccggcaaggacccc 220 Query: 299 aacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggag 358 |||||||| |||||||| |||||||| |||||||| ||||||| || || ||| ||||| Sbjct: 221 aacaagcctaagagggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggag 280 Query: 359 ttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgag 418 |||||| |||||||||| ||||||||||| ||||| || || || ||||| || || || Sbjct: 281 ttcaaggagaagaaccctaagaacaagtctgtcgctgcggtggggaaagctgctggcgac 340 Query: 419 aggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctc 478 |||||||| | ||||||| || || ||||| |||| ||| |||||||| ||||||||| Sbjct: 341 aggtggaaatccctgagcgagtcggacaaggctccctatgtagccaaggctaacaagctc 400 Query: 479 aagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctgcc 538 ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 401 aagctcgagtacaacaaggccatcgctgcctacaacaagggcgagagcactgcagct--- 457 Query: 539 ccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtcc 598 |||||||| |||||||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 458 ---aagaaggctcctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtcc 514 Query: 599 aagtcggagatcaatgacgacgatgacgatgagggtag 636 ||||||||| |||||||||| ||||| || |||||||| Sbjct: 515 aagtcggaggtcaatgacgaggatgatgaagagggtag 552 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 734 tgctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||||| ||||||||| Sbjct: 732 tgctataacggatagcgctcctcgttggcgcc 763
>emb|X66077.1|ZMMNB1B Z.mays MNB1b mRNA for DNA-binding protein Length = 918 Score = 406 bits (205), Expect = e-110 Identities = 395/458 (86%), Gaps = 9/458 (1%) Strand = Plus / Plus Query: 179 gccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtgaag 238 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 33 gccatgaagggggccaaatccaagggcgccgccaaggccgatgccaagctggcggtgaag 92 Query: 239 agcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacccc 298 ||||||||||||||||| || ||||||||| | ||| || ||||| |||||||||||| Sbjct: 93 agcaagggggcggagaagcc---cgccaagggcaggaaagggaaggccggcaaggacccc 149 Query: 299 aacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggag 358 |||||||| |||||||| |||||||| |||||||| ||||||| || || ||| ||||| Sbjct: 150 aacaagcctaagagggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggag 209 Query: 359 ttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgag 418 |||||| |||||||||| ||||||||||| ||||| || || || ||||| || || || Sbjct: 210 ttcaaggagaagaaccctaagaacaagtctgtcgctgcggtggggaaagctgctggcgac 269 Query: 419 aggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctc 478 |||||||| | ||||||| || || ||||| |||| ||| |||||||| ||||||||| Sbjct: 270 aggtggaaatccctgagcgagtcggacaaggctccctatgtagccaaggctaacaagctc 329 Query: 479 aagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctgcc 538 ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 330 aagctcgagtacaacaaggccatcgctgcctacaacaagggcgagagcactgcagct--- 386 Query: 539 ccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtcc 598 |||||||| |||||||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 387 ---aagaaggctcctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtcc 443 Query: 599 aagtcggagatcaatgacgacgatgacgatgagggtag 636 ||||||||| |||||||||| ||||| || |||||||| Sbjct: 444 aagtcggaggtcaatgacgaggatgatgaagagggtag 481 Score = 75.8 bits (38), Expect = 3e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 867 tcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 799 tcatcggctaacattgtcataatgtcagtttgggtaatgttagatt 844 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 734 tgctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||||| ||||||||| Sbjct: 661 tgctataacggatagcgctcctcgttggcgcc 692
>emb|X58282.1|ZMHMGPMR Maize mRNA for a high mobility group protein Length = 885 Score = 406 bits (205), Expect = e-110 Identities = 395/458 (86%), Gaps = 9/458 (1%) Strand = Plus / Plus Query: 179 gccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtgaag 238 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 37 gccatgaagggggccaaatccaagggcgccgccaaggccgatgccaagctggcggtgaag 96 Query: 239 agcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacccc 298 ||||||||||||||||| || ||||||||| | ||| || ||||| |||||||||||| Sbjct: 97 agcaagggggcggagaagcc---cgccaagggcaggaaagggaaggccggcaaggacccc 153 Query: 299 aacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggag 358 |||||||| |||||||| |||||||| |||||||| ||||||| || || ||| ||||| Sbjct: 154 aacaagcctaagagggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggag 213 Query: 359 ttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgag 418 |||||| |||||||||| ||||||||||| ||||| || || || ||||| || || || Sbjct: 214 ttcaaggagaagaaccctaagaacaagtctgtcgctgcggtggggaaagctgctggcgac 273 Query: 419 aggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctc 478 |||||||| | ||||||| || || ||||| |||| ||| |||||||| ||||||||| Sbjct: 274 aggtggaaatccctgagcgagtcggacaaggctccctatgtagccaaggctaacaagctc 333 Query: 479 aagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctgcc 538 ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 334 aagctcgagtacaacaaggccatcgctgcctacaacaagggcgagagcactgcagct--- 390 Query: 539 ccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtcc 598 |||||||| |||||||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 391 ---aagaaggctcctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtcc 447 Query: 599 aagtcggagatcaatgacgacgatgacgatgagggtag 636 ||||||||| |||||||||| ||||| || |||||||| Sbjct: 448 aagtcggaggtcaatgacgaggatgatgaagagggtag 485 Score = 75.8 bits (38), Expect = 3e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 867 tcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 804 tcatcggctaacattgtcataatgtcagtttgggtaatgttagatt 849 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 734 tgctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||||| ||||||||| Sbjct: 665 tgctataacggatagcgctcctcgttggcgcc 696
>gb|AY103575.1| Zea mays PCO080122 mRNA sequence Length = 1153 Score = 406 bits (205), Expect = e-110 Identities = 395/458 (86%), Gaps = 9/458 (1%) Strand = Plus / Plus Query: 179 gccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtgaag 238 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 225 gccatgaagggggccaaatccaagggcgccgccaaggccgatgccaagctggcggtgaag 284 Query: 239 agcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacccc 298 ||||||||||||||||| || ||||||||| | ||| || ||||| |||||||||||| Sbjct: 285 agcaagggggcggagaagcc---cgccaagggcaggaaagggaaggccggcaaggacccc 341 Query: 299 aacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggag 358 |||||||| |||||||| |||||||| |||||||| ||||||| || || ||| ||||| Sbjct: 342 aacaagcctaagagggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggag 401 Query: 359 ttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgag 418 |||||| |||||||||| ||||||||||| ||||| || || || ||||| || || || Sbjct: 402 ttcaaggagaagaaccctaagaacaagtctgtcgctgcggtggggaaagctgctggcgac 461 Query: 419 aggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctc 478 |||||||| | ||||||| || || ||||| |||| ||| |||||||| ||||||||| Sbjct: 462 aggtggaaatccctgagcgagtcggacaaggctccctatgtagccaaggctaacaagctc 521 Query: 479 aagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctgcc 538 ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 522 aagctcgagtacaacaaggccatcgctgcctacaacaagggcgagagcactgcagct--- 578 Query: 539 ccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtcc 598 |||||||| |||||||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 579 ---aagaaggctcctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtcc 635 Query: 599 aagtcggagatcaatgacgacgatgacgatgagggtag 636 ||||||||| |||||||||| ||||| || |||||||| Sbjct: 636 aagtcggaggtcaatgacgaggatgatgaagagggtag 673 Score = 75.8 bits (38), Expect = 3e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 867 tcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 991 tcatcggctaacattgtcataatgtcagtttgggtaatgttagatt 1036 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 734 tgctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||||| ||||||||| Sbjct: 853 tgctataacggatagcgctcctcgttggcgcc 884
>emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120M18, full insert sequence Length = 994 Score = 402 bits (203), Expect = e-109 Identities = 397/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 220 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 279 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| |||||||| || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 280 agagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 339 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| ||| Sbjct: 340 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaagg 399 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 400 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 459 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 460 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 519 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 573 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 574 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 630 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 631 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 673 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 942 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 993 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 839 ctataacggatagcgctccttgttggcgcc 868
>ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g0728000 (Os06g0728000) mRNA, complete cds Length = 913 Score = 402 bits (203), Expect = e-109 Identities = 397/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 143 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 202 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| |||||||| || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 203 agagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 262 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| ||| Sbjct: 263 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaagg 322 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 323 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 382 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 383 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 442 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 496 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 497 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 553 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 554 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 596 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 862 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 913 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 759 ctataacggatagcgctccttgttggcgcc 788
>gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 402 bits (203), Expect = e-109 Identities = 397/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 119 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 178 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| |||||||| || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 179 agagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 238 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| ||| Sbjct: 239 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaagg 298 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 299 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 358 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 359 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 418 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 472 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 473 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 529 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 530 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 572 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 838 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 889 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 735 ctataacggatagcgctccttgttggcgcc 764
>dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 402 bits (203), Expect = e-109 Identities = 397/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 143 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 202 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| |||||||| || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 203 agagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 262 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| ||| Sbjct: 263 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaagg 322 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 323 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 382 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 383 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 442 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 496 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 497 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 553 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 554 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 596 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 862 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 913 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 759 ctataacggatagcgctccttgttggcgcc 788
>gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 402 bits (203), Expect = e-109 Identities = 397/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 70 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 129 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| |||||||| || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 130 agagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 189 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| ||| Sbjct: 190 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaagg 249 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 250 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 309 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 310 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 369 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 423 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 424 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 480 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 481 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 523 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 789 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 840 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 686 ctataacggatagcgctccttgttggcgcc 715
>emb|CT833401.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119H03, full insert sequence Length = 1323 Score = 394 bits (199), Expect = e-106 Identities = 396/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 540 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 599 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| ||||| || || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 600 agagtaagggcgcggaaaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 659 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| ||| Sbjct: 660 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaagg 719 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 720 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 779 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 780 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 839 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 893 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 894 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 950 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 951 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 993 Score = 65.9 bits (33), Expect = 2e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||| | ||||||| || |||||||||| Sbjct: 1262 tccattgtcatcggctaacattgtgataaaaacagtttgcgt-atgttagatt 1313 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 1159 ctataacggatagcgctccttgttggcgcc 1188
>dbj|AK068898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E23, full insert sequence Length = 998 Score = 394 bits (199), Expect = e-106 Identities = 396/463 (85%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtga 236 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 228 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtga 287 Query: 237 agagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacc 296 |||| ||||| |||||||| || ||||||||||| | |||||| ||||| |||||||||| Sbjct: 288 agagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggacc 347 Query: 297 ccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgagg 356 ||||||||||||||||||| ||| ||| |||||||| || |||| |||||||| || Sbjct: 348 ccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaggg 407 Query: 357 agttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtg 416 |||||||| |||||||||||||||| || || ||||| || || || ||||| ||||||| Sbjct: 408 agttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtg 467 Query: 417 agaggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagc 476 | |||||||| | ||| |||| | || ||||| |||| ||| |||||||||||||||| Sbjct: 468 ataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagc 527 Query: 477 tcaagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctg 536 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 tcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg------ 581 Query: 537 ccccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagt 596 | |||||||| | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct: 582 ---ccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 638 Query: 597 ccaagtcggagatcaatgacgacgatgacgatgagggtagcga 639 ||||||| ||| ||||||| || |||||||| ||||| ||||| Sbjct: 639 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcga 681 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 947 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 998 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 844 ctataacggatagcgctccttgttggcgcc 873
>gb|BT016280.1| Zea mays clone Contig113 mRNA sequence Length = 817 Score = 391 bits (197), Expect = e-105 Identities = 393/458 (85%), Gaps = 9/458 (1%) Strand = Plus / Plus Query: 179 gccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagttggcggtgaag 238 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 334 gccatgaagggggccaaatccaagggcgccgccaaggccgatgccaagctggcggtgaag 393 Query: 239 agcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcaggcaaggacccc 298 ||||||||||||||||| || ||||||||| | ||| || ||||| |||||||||||| Sbjct: 394 agcaagggggcggagaagcc---cgccaagggcaggaaagggaaggccggcaaggacccc 450 Query: 299 aacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggag 358 |||||||| |||||||| |||||||| |||||||| ||||||| || || ||| ||||| Sbjct: 451 aacaagcctaagagggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggag 510 Query: 359 ttcaagcagaagaaccccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgag 418 |||||| |||||||||| ||||||||||| ||||| || || || ||||| || || || Sbjct: 511 ttcaaggagaagaaccctaagaacaagtctgtcgctgcggtggggaaagctgctggcgac 570 Query: 419 aggtggaagagcttgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctc 478 |||||||| | ||||||| || || ||||| |||| ||| |||||||| ||||||||| Sbjct: 571 aggtggaaatccctgagcgagtcggacaaggctccctatgtagccaaggctaacaagctc 630 Query: 479 aagggcgagtacaacaaggccattgctgcctacaacaagggcgagagcactgctgctgcc 538 ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 631 aagctcgactacaacaaggccatcgctgcctacaacaagggcgagagcactgcagct--- 687 Query: 539 ccaaagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtcc 598 |||||||| |||||||||||| |||||||||| |||| ||||| || ||||||||| Sbjct: 688 ---aagaaggctcctgccaaggaggaagaggaggaacatgaagaggagtctgacaagtcc 744 Query: 599 aagtcggagatcaatgacgacgatgacgatgagggtag 636 ||||||||| |||||||||| ||||| || |||||||| Sbjct: 745 aagtcggaggtcaatgacgaggatgatgaagagggtag 782
>gb|AY262827.1| Oryza sativa (indica cultivar-group) HMGB1 gene, complete cds Length = 3659 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 446 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 505 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2472 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 2531 Query: 506 gcctacaacaagggcgag 523 |||||||||||||||||| Sbjct: 2532 gcctacaacaagggcgag 2549 Score = 111 bits (56), Expect = 5e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 226 gttggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggc 285 |||||| |||||||| ||||| |||||||| || ||||||||||| | |||||| ||||| Sbjct: 1919 gttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggc 1978 Query: 286 aggcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgt 333 ||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 1979 cggcaaggaccccaacaagcccaagagggctccctccgctttcttcgt 2026 Score = 91.7 bits (46), Expect = 4e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 554 gccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaat 613 |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| ||||| Sbjct: 2658 gccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaat 2717 Query: 614 gacgacgatgacgatgagggtagcga 639 || || |||||||| ||||| ||||| Sbjct: 2718 gatgaggatgacgacgagggcagcga 2743 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagt 227 |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1751 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagt 1801 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 3294 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 3345 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 gagttccgcgaggagttcaagcagaagaaccccaagaa 381 |||||||| ||||||||||| |||||||||||||||| Sbjct: 2114 gagttccgtaaggagttcaaggagaagaaccccaagaa 2151 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 3191 ctataacggatagcgctccttgttggcgcc 3220
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 446 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 505 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 30478333 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 30478392 Query: 506 gcctacaacaagggcgag 523 |||||||||||||||||| Sbjct: 30478393 gcctacaacaagggcgag 30478410 Score = 111 bits (56), Expect = 5e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 226 gttggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggc 285 |||||| |||||||| ||||| |||||||| || ||||||||||| | |||||| ||||| Sbjct: 30477778 gttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggc 30477837 Query: 286 aggcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgt 333 ||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 30477838 cggcaaggaccccaacaagcccaagagggctccctccgctttcttcgt 30477885 Score = 91.7 bits (46), Expect = 4e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 554 gccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaat 613 |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| ||||| Sbjct: 30478519 gccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaat 30478578 Query: 614 gacgacgatgacgatgagggtagcga 639 || || |||||||| ||||| ||||| Sbjct: 30478579 gatgaggatgacgacgagggcagcga 30478604 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagt 227 |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 30477610 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagt 30477660 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 30479168 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 30479219 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 gagttccgcgaggagttcaagcagaagaaccccaagaa 381 |||||||| ||||||||||| |||||||||||||||| Sbjct: 30477975 gagttccgtaaggagttcaaggagaagaaccccaagaa 30478012 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 30479065 ctataacggatagcgctccttgttggcgcc 30479094 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 caagtccgtcgccgccgtcggc 403 |||||||||||||||||||||| Sbjct: 22176818 caagtccgtcgccgccgtcggc 22176839
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 446 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 505 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115694 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 115753 Query: 506 gcctacaacaagggcgag 523 |||||||||||||||||| Sbjct: 115754 gcctacaacaagggcgag 115771 Score = 111 bits (56), Expect = 5e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 226 gttggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggc 285 |||||| |||||||| ||||| |||||||| || ||||||||||| | |||||| ||||| Sbjct: 115139 gttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggc 115198 Query: 286 aggcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgt 333 ||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 115199 cggcaaggaccccaacaagcccaagagggctccctccgctttcttcgt 115246 Score = 91.7 bits (46), Expect = 4e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 554 gccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaat 613 |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| ||||| Sbjct: 115880 gccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaat 115939 Query: 614 gacgacgatgacgatgagggtagcga 639 || || |||||||| ||||| ||||| Sbjct: 115940 gatgaggatgacgacgagggcagcga 115965 Score = 85.7 bits (43), Expect = 3e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 177 cagccatgaagggggccaaatccaagggcgccgccaaggccgacaccaagt 227 |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 114971 cagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagt 115021 Score = 81.8 bits (41), Expect = 4e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 860 tccattgtcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 116529 tccattgtcatcggctaacattgtgataatatcagtttgcgt-atgttagatt 116580 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 gagttccgcgaggagttcaagcagaagaaccccaagaa 381 |||||||| ||||||||||| |||||||||||||||| Sbjct: 115336 gagttccgtaaggagttcaaggagaagaaccccaagaa 115373 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 116426 ctataacggatagcgctccttgttggcgcc 116455
>gb|DQ083221.1| Oryza sativa (indica cultivar-group) clone 5B2A67 mRNA sequence Length = 395 Score = 117 bits (59), Expect = 7e-23 Identities = 118/139 (84%), Gaps = 9/139 (6%) Strand = Plus / Plus Query: 489 acaacaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaagg 548 |||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1 acaacaaggccattgctgcctacaacaagggcgagagcactg---------ccaagaagg 51 Query: 549 ccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggaga 608 | | |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| Sbjct: 52 cacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgagg 111 Query: 609 tcaatgacgacgatgacga 627 ||||||| || |||||||| Sbjct: 112 tcaatgatgaggatgacga 130 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 736 ctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||| |||||||||| Sbjct: 308 ctataacggatagcgctccttgttggcgcc 337
>emb|AJ131373.1|ZMA131373 Zea mays hmga gene, exons 1-7 Length = 2133 Score = 117 bits (59), Expect = 7e-23 Identities = 100/113 (88%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 228 tggcggtgaagagcaagggggcggagaaaccggccgccaaggggaagaagggaaaggcag 287 |||||||||||||||||||||||||||| || ||||||||| | ||| || ||||| | Sbjct: 247 tggcggtgaagagcaagggggcggagaagcc---cgccaagggcaggaaagggaaggccg 303 Query: 288 gcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||||||||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 304 gcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 356 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 542 aagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaag 601 |||||||| |||||||||||| ||||||||||||||| ||||| || |||||||||||| Sbjct: 982 aagaaggctcctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtccaag 1041 Query: 602 tcggagatcaatgacgacgatgacgatgagggtag 636 |||||| |||||||||| ||||| || |||||||| Sbjct: 1042 tcggaggtcaatgacgaggatgatgaagagggtag 1076 Score = 99.6 bits (50), Expect = 2e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 446 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 505 ||||| |||| ||| |||||||| |||||||||||| |||||||||||||||||| ||| Sbjct: 781 aaggctccctatgtagccaaggctaacaagctcaagctcgagtacaacaaggccatcgct 840 Query: 506 gcctacaacaagggcgag 523 |||||||||||||||||| Sbjct: 841 gcctacaacaagggcgag 858 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 182 atgaagggggccaaatccaagggcgccgccaaggccga 219 |||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgaagggggccaaatccaagggcgccgccaaggccga 38 Score = 75.8 bits (38), Expect = 3e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 867 tcatcggctaacattgtgataatatcagtttgggtaatgttagatt 912 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1671 tcatcggctaacattgtcataatgtcagtttgggtaatgttagatt 1716 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 354 aggagttcaagcagaagaaccccaagaacaagtccgtcgc 393 ||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 466 aggagttcaaggagaagaaccctaagaacaagtctgtcgc 505 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 734 tgctataacggatagcgctccctgttggcgcc 765 ||||||||||||||||||||| ||||||||| Sbjct: 1532 tgctataacggatagcgctcctcgttggcgcc 1563
>emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobility group protein (clone pBAN EU134) Length = 784 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 280 aaaggcaggcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcat 339 |||||| | |||||| || ||||||||||||||| | ||||||||||||||||||||||| Sbjct: 153 aaaggcggacaaggatccgaacaagcccaagaggcctcccagcgccttcttcgtcttcat 212 Query: 340 gg 341 || Sbjct: 213 gg 214
>gb|AF527616.1| Zea mays nucleasome/chromatin assembly factor D protein NFD101 (nfd101) mRNA, complete cds Length = 715 Score = 67.9 bits (34), Expect = 6e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 281 aaggcaggcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||||| |||||||| ||||||||||||||| | || ||||| ||||||||||||||| Sbjct: 123 aaggcagagaaggacccaaacaagcccaagaggcctccgagcgcgttcttcgtcttcatg 182 Query: 341 ggcgagttccgcgaggagttcaagcagaagaaccccaa 378 | |||||| | |||| | |||| ||||| ||||||| Sbjct: 183 gaggagttcaggaaggactacaaggagaagcaccccaa 220
>emb|Y08807.1|ZMHMGD1 Z.mays mRNA for HMG protein Length = 731 Score = 67.9 bits (34), Expect = 6e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 281 aaggcaggcaaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||||| |||||||| ||||||||||||||| | || ||||| ||||||||||||||| Sbjct: 97 aaggcagagaaggacccaaacaagcccaagaggcctccgagcgcgttcttcgtcttcatg 156 Query: 341 ggcgagttccgcgaggagttcaagcagaagaaccccaa 378 | |||||| | |||| | |||| ||||| ||||||| Sbjct: 157 gaggagttcaggaaggactacaaggagaagcaccccaa 194
>gb|DQ244326.1| Zea mays clone 4879 mRNA sequence Length = 791 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || ||||| |||||||||||||||| |||||| Sbjct: 153 aaggacccaaacaagcccaagaggcctccgagcgcgttcttcgtcttcatggaggagttc 212 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 213 aggaaggactacaaggagaagcaccccaa 241
>gb|DQ244325.1| Zea mays clone 4878 mRNA sequence Length = 791 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || ||||| |||||||||||||||| |||||| Sbjct: 153 aaggacccaaacaagcccaagaggcctccgagcgcgttcttcgtcttcatggaggagttc 212 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 213 aggaaggactacaaggagaagcaccccaa 241
>gb|BT017797.1| Zea mays clone EL01N0505D03.c mRNA sequence Length = 649 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || ||||| |||||||||||||||| |||||| Sbjct: 47 aaggacccaaacaagcccaagaggcctccgagcgcgttcttcgtcttcatggaggagttc 106 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 107 aggaaggactacaaggagaagcaccccaa 135
>gb|AF440221.1|AF440221 Zea mays cultivar Ohio43 HMG-like nucleosome/chromatin assembly factor D (nfd101) mRNA, complete cds Length = 781 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || ||||| |||||||||||||||| |||||| Sbjct: 145 aaggacccaaacaagcccaagaggcctccgagcgcgttcttcgtcttcatggaggagttc 204 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 205 aggaaggactacaaggagaagcaccccaa 233
>gb|BT017604.1| Zea mays clone EL01N0432C03.c mRNA sequence Length = 727 Score = 58.0 bits (29), Expect = 6e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || | ||| |||||||||||||||| |||||| Sbjct: 76 aaggacccaaacaagcccaagaggcctccgaccgcgttcttcgtcttcatggaggagttc 135 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 136 aggaaggactacaaggagaagcaccccaa 164
>gb|BT017020.1| Zea mays clone EK07D2312C01.c mRNA sequence Length = 769 Score = 58.0 bits (29), Expect = 6e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || | ||| |||||||||||||||| |||||| Sbjct: 138 aaggacccaaacaagcccaagaggcctccgaccgcgttcttcgtcttcatggaggagttc 197 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 198 aggaaggactacaaggagaagcaccccaa 226
>gb|AY104636.1| Zea mays PCO072737 mRNA sequence Length = 577 Score = 58.0 bits (29), Expect = 6e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||| ||||||||||||||| | || | ||| |||||||||||||||| |||||| Sbjct: 149 aaggacccaaacaagcccaagaggcctccgaccgcgttcttcgtcttcatggaggagttc 208 Query: 350 cgcgaggagttcaagcagaagaaccccaa 378 | |||| | |||| ||||| ||||||| Sbjct: 209 aggaaggactacaaggagaagcaccccaa 237
>ref|NM_001035997.1| Arabidopsis thaliana HMGB2 (HIGH MOBILITY GROUP B 2) (HMGB2) mRNA, complete cds Length = 948 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 283 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 342 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 343 cgtgagactttcaagaaggaaaaccccaagaacaagtc 380
>ref|NM_101920.2| Arabidopsis thaliana HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor (HMGB2) mRNA, complete cds Length = 954 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 283 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 342 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 343 cgtgagactttcaagaaggaaaaccccaagaacaagtc 380
>gb|AY389691.1| Hyacinthus orientalis HMG transcription factor mRNA, partial cds Length = 764 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 566 gaggaggaagatgaggaggaatccgacaagtccaagtc 603 ||||||||||| || ||||| ||||||||||||||||| Sbjct: 375 gaggaggaagacgatgaggagtccgacaagtccaagtc 412
>gb|AY063064.1| Arabidopsis thaliana unknown protein (At1g20693) mRNA, complete cds Length = 466 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 97 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 156 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 157 cgtgagactttcaagaaggaaaaccccaagaacaagtc 194
>gb|AF370248.1| Arabidopsis thaliana unknown protein (At1g20693) mRNA, complete cds Length = 912 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 280 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 339 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 340 cgtgagactttcaagaaggaaaaccccaagaacaagtc 377
>emb|Y14072.1|ATHMGBET1 Arabidopsis thaliana mRNA for HMG beta1 protein Length = 686 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 130 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 189 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 190 cgtgagactttcaagaaggaaaaccccaagaacaagtc 227
>gb|AY084731.1| Arabidopsis thaliana clone 11615 mRNA, complete sequence Length = 861 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 282 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgtgttcatggaagatttc 341 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 342 cgtgagactttcaagaaggaaaaccccaagaacaagtc 379
>dbj|AK118543.1| Arabidopsis thaliana At1g20685 mRNA for unknown protein, complete cds, clone: RAFL19-77-C17 Length = 810 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 195 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 254 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 255 cgtgagactttcaagaaggaaaaccccaagaacaagtc 292
>emb|BX814296.1|CNS0AEA4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 814 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgggcgagttc 349 |||||||||||||| || |||||| | |||| || |||||||| ||||||| || ||| Sbjct: 171 aaggaccccaacaaaccaaagaggccagccagtgctttcttcgttttcatggaagatttc 230 Query: 350 cgcgaggagttcaagcagaagaaccccaagaacaagtc 387 || ||| |||||| || | ||||||||||||||||| Sbjct: 231 cgtgagactttcaagaaggaaaaccccaagaacaagtc 268
>gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosome 15, complete sequence Length = 196777 Score = 50.1 bits (25), Expect = 0.014 Identities = 25/25 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttccccaaa 52 ||||||||||||||||||||||||| Sbjct: 127427 tccttccttccttcctttccccaaa 127403
>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence Length = 179099 Score = 50.1 bits (25), Expect = 0.014 Identities = 31/33 (93%) Strand = Plus / Minus Query: 12 tgtctccgtctccgtctccttccttccttcctt 44 |||||| ||||| |||||||||||||||||||| Sbjct: 112982 tgtctctgtctctgtctccttccttccttcctt 112950
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 50.1 bits (25), Expect = 0.014 Identities = 28/29 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaa 586 ||||||||||||||||||| ||||||||| Sbjct: 79867 aggaggtagaggaggaagaagaggaggaa 79895
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 50.1 bits (25), Expect = 0.014 Identities = 34/37 (91%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaatccgacaa 594 |||||||||||||||| || ||||||||||| ||||| Sbjct: 162407 aggaggtagaggaggaggaggaggaggaatctgacaa 162443
>gb|AC073993.4| Homo sapiens BAC clone RP11-674L1 from 2, complete sequence Length = 38785 Score = 50.1 bits (25), Expect = 0.014 Identities = 25/25 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttccccaaa 52 ||||||||||||||||||||||||| Sbjct: 33705 tccttccttccttcctttccccaaa 33729
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 50.1 bits (25), Expect = 0.014 Identities = 28/29 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaa 586 ||||||||||||||||||| ||||||||| Sbjct: 12801 aggaggtagaggaggaagaagaggaggaa 12829
>gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, complete sequence Length = 148929 Score = 50.1 bits (25), Expect = 0.014 Identities = 34/37 (91%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaatccgacaa 594 |||||||||||||||| || ||||||||||| ||||| Sbjct: 94012 aggaggtagaggaggaggaggaggaggaatctgacaa 94048
>ref|XM_001065305.1| PREDICTED: Rattus norvegicus hypothetical protein LOC685797 (LOC685797), mRNA Length = 507 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 182 aggaggtagaggaggaagaggaggagga 209
>ref|XM_001061364.1| PREDICTED: Rattus norvegicus hypothetical protein LOC681350 (LOC681350), mRNA Length = 573 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 269 aggaggtagaggaggaagaggaggagga 296 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 296 aggaggtagaggaggaagaagaggagga 323 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 323 aggaggtagaggaggaagaggaggagga 350 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaa 586 |||||| |||||||||||| ||||||||| Sbjct: 449 aggaggaagaggaggaagaggaggaggaa 477
>emb|CT981402.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 721 Score = 48.1 bits (24), Expect = 0.057 Identities = 45/52 (86%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatgg 341 ||||| || |||||||| |||||| | |||| ||||||||||||||||||| Sbjct: 111 aaggatcctaacaagcctaagaggcctgccagtgccttcttcgtcttcatgg 162
>gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chromosome 2, complete sequence Length = 206103 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Minus Query: 16 tccgtctccgtctccttccttccttcctttcc 47 |||||||| |||||||||||||||||||||| Sbjct: 60094 tccgtctctctctccttccttccttcctttcc 60063
>gb|AC183099.3| Pan troglodytes BAC clone CH251-727F5 from chromosome 2, complete sequence Length = 183714 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Minus Query: 16 tccgtctccgtctccttccttccttcctttcc 47 |||||||| |||||||||||||||||||||| Sbjct: 16437 tccgtctctctctccttccttccttcctttcc 16406
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence Length = 216261 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagga 585 |||||| ||||||||||||||||||||| Sbjct: 121355 aggaggaagaggaggaagatgaggagga 121328
>gb|AC073873.7| Homo sapiens BAC clone RP11-575M4 from 7, complete sequence Length = 188992 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 20 tctccgtctccttccttccttcctttcc 47 |||| ||||||||||||||||||||||| Sbjct: 63205 tctctgtctccttccttccttcctttcc 63232
>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence Length = 199810 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Minus Query: 30 cttccttccttcctttccccaaac 53 |||||||||||||||||||||||| Sbjct: 170019 cttccttccttcctttccccaaac 169996
>gb|AC127333.3| Mus musculus BAC clone RP23-137F10 from 7, complete sequence Length = 185795 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Plus Query: 30 cttccttccttcctttccccaaac 53 |||||||||||||||||||||||| Sbjct: 109438 cttccttccttcctttccccaaac 109461
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 144715 aggaggtagaggaggaagaggaggagga 144742 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 144769 aggaggtagaggaggaagaggaggagga 144796 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaa 586 |||||| |||||||||||| ||||||||| Sbjct: 144895 aggaggaagaggaggaagaggaggaggaa 144923
>dbj|AK022458.1| Homo sapiens cDNA FLJ12396 fis, clone MAMMA1002758 Length = 3277 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 20 tctccgtctccttccttccttcctttcc 47 |||| ||||||||||||||||||||||| Sbjct: 2464 tctctgtctccttccttccttcctttcc 2491
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 180982 aggaggtagaggaggaagaggaggagga 180955 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 181009 aggaggtagaggaggaagaagaggagga 180982 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagga 585 ||||||||||||||||||| |||||||| Sbjct: 181036 aggaggtagaggaggaagaggaggagga 181009 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggaggaa 586 |||||| |||||||||||| ||||||||| Sbjct: 180856 aggaggaagaggaggaagaggaggaggaa 180828
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence Length = 188409 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 |||||| ||||||||||||||||||||| Sbjct: 30879 aggaggaagaggaggaagatgaggagga 30906
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcctt 44 |||||||||||||||||||||||| Sbjct: 536634 ctccgtctccttccttccttcctt 536611 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 gagtacaacaaggccattgct 505 ||||||||||||||||||||| Sbjct: 16380348 gagtacaacaaggccattgct 16380328 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 556 caaggaggtagaggaggaagatgaggagg 584 ||||| ||||||||| ||||||||||||| Sbjct: 18867480 caaggtggtagaggaagaagatgaggagg 18867508
>gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, complete sequence Length = 175350 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttccccaa 51 |||||||||||||||||||||||| Sbjct: 103998 tccttccttccttcctttccccaa 103975
>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence Length = 201260 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 |||||| ||||||||||||||||||||| Sbjct: 129898 aggaggaagaggaggaagatgaggagga 129925
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcctt 44 |||||||||||||||||||||||| Sbjct: 138798 ctccgtctccttccttccttcctt 138775
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagga 585 |||||| ||||||||||||||||||||| Sbjct: 8388 aggaggaagaggaggaagatgaggagga 8361
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcctt 44 |||||||||||||||||||||||| Sbjct: 90546 ctccgtctccttccttccttcctt 90523
>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence Length = 157682 Score = 48.1 bits (24), Expect = 0.057 Identities = 27/28 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagga 585 |||||| ||||||||||||||||||||| Sbjct: 74209 aggaggaagaggaggaagatgaggagga 74236
>emb|AL670231.7| Mouse DNA sequence from clone RP23-329G7 on chromosome 4, complete sequence Length = 229957 Score = 48.1 bits (24), Expect = 0.057 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcccc 49 |||||||||||||||||||||||| Sbjct: 156399 tctccttccttccttcctttcccc 156422
>gb|CP000478.1| Syntrophobacter fumaroxidans MPOB, complete genome Length = 4990251 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 259 ggccgccaaggggaagaagggaa 281 ||||||||||||||||||||||| Sbjct: 862903 ggccgccaaggggaagaagggaa 862881
>gb|AC185329.4| Pan troglodytes BAC clone CH251-168J18 from chromosome unknown, complete sequence Length = 179247 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 gtctccttccttccttcctttcc 47 ||||||||||||||||||||||| Sbjct: 153018 gtctccttccttccttcctttcc 153040
>ref|XM_528704.2| PREDICTED: Pan troglodytes ADAM metallopeptidase with thrombospondin type 1 motif, 9 (ADAMTS9), mRNA Length = 7623 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||||||||||||||| ||||||| Sbjct: 629 aggaggtagaggaggaagaggaggagg 603
>gb|AC186182.2| Pan troglodytes BAC clone CH251-282J19 from chromosome 7, complete sequence Length = 190232 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttccc 48 ||||||||||||||||||||||| Sbjct: 51278 tctccttccttccttcctttccc 51300
>ref|XM_001091856.1| PREDICTED: Macaca mulatta similar to ADAM metallopeptidase with thrombospondin type 1 motif, 9 preproprotein (LOC698341), mRNA Length = 7626 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||||||||||||||| ||||||| Sbjct: 629 aggaggtagaggaggaagaggaggagg 603
>emb|CT988923.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 427 Score = 46.1 bits (23), Expect = 0.23 Identities = 44/51 (86%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||| || |||||||| |||||| | |||| |||||||||||||||||| Sbjct: 254 aaggatcctaacaagcctaagaggcctgccagtgccttcttcgtcttcatg 304
>emb|CT988916.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 420 Score = 46.1 bits (23), Expect = 0.23 Identities = 44/51 (86%) Strand = Plus / Minus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||| || |||||||| |||||| | |||| |||||||||||||||||| Sbjct: 169 aaggatcctaacaagcctaagaggcctgccagtgccttcttcgtcttcatg 119
>emb|CT988849.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 428 Score = 46.1 bits (23), Expect = 0.23 Identities = 44/51 (86%) Strand = Plus / Minus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||| || |||||||| |||||| | |||| |||||||||||||||||| Sbjct: 175 aaggatcctaacaagcctaagaggcctgccagtgccttcttcgtcttcatg 125
>emb|CT988842.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 420 Score = 46.1 bits (23), Expect = 0.23 Identities = 44/51 (86%) Strand = Plus / Plus Query: 290 aaggaccccaacaagcccaagagggcgcccagcgccttcttcgtcttcatg 340 ||||| || |||||||| |||||| | |||| |||||||||||||||||| Sbjct: 252 aaggatcctaacaagcctaagaggcctgccagtgccttcttcgtcttcatg 302
>ref|NM_001075155.1| Bos taurus death-associated protein 6 (DAXX), mRNA gb|BC114741.1| Bos taurus death-associated protein 6, mRNA (cDNA clone MGC:138055 IMAGE:8082783), complete cds Length = 2580 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 1464 gaggaagaggaggaagatgaggaggaa 1490 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaa 586 |||||| ||| |||||||||||||||||| Sbjct: 1495 aggaggaagacgaggaagatgaggaggaa 1523
>emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on chromosome 16, complete sequence Length = 199628 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 53777 ctccttccttccttcctttcccc 53799
>gb|AC183383.2| Pan troglodytes BAC clone CH251-394M21 from chromosome 7, complete sequence Length = 146307 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttccc 48 ||||||||||||||||||||||| Sbjct: 4278 tctccttccttccttcctttccc 4256
>gb|AC117590.14| Mus musculus chromosome 3, clone RP23-225F12, complete sequence Length = 180451 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttcctttc 46 |||| |||||||||||||||||||||| Sbjct: 110097 tctctgtctccttccttccttcctttc 110071
>gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosome 13, complete sequence Length = 185965 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 24 cgtctccttccttccttcctttc 46 ||||||||||||||||||||||| Sbjct: 116642 cgtctccttccttccttcctttc 116620
>gb|AY035304.1| Amblyrhynchus cristatus microsatellite AC(caam)60 sequence Length = 282 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 gtctccttccttccttcctttcc 47 ||||||||||||||||||||||| Sbjct: 145 gtctccttccttccttcctttcc 167
>gb|AC154278.2| Mus musculus BAC clone RP24-269E24 from chromosome 16, complete sequence Length = 153579 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 124376 ctccttccttccttcctttcccc 124354
>gb|AC114679.10| Mus musculus chromosome 3, clone RP24-235E22, complete sequence Length = 157152 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttccc 48 ||||||||||||||||||||||| Sbjct: 123818 tctccttccttccttcctttccc 123840
>ref|XM_500967.1| Yarrowia lipolytica CLIB122, YALI0B16280g predicted mRNA Length = 843 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 530 gctgctgccccaaagaaggccgctgcc 556 ||||||||||| ||||||||||||||| Sbjct: 679 gctgctgcccccaagaaggccgctgcc 705
>ref|NM_182920.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9 (ADAMTS9), mRNA Length = 7335 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||||||||||||||| ||||||| Sbjct: 318 aggaggtagaggaggaagaggaggagg 292
>gb|BC037014.1| Mus musculus SUMO/sentrin specific peptidase 3, mRNA (cDNA clone MGC:46759 IMAGE:5344274), complete cds Length = 2220 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 317 gaggaagaggaggaagatgaggaggaa 343
>gb|BC036770.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9, mRNA (cDNA clone IMAGE:5760026), with apparent retained intron Length = 2912 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||||||||||||||| ||||||| Sbjct: 619 aggaggtagaggaggaagaggaggagg 593
>gb|AF130343.2| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence Length = 292718 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 214753 ctccttccttccttcctttcccc 214775
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 46.1 bits (23), Expect = 0.23 Identities = 29/31 (93%) Strand = Plus / Plus Query: 14 tctccgtctccgtctccttccttccttcctt 44 ||||| ||||| ||||||||||||||||||| Sbjct: 100410 tctccctctccctctccttccttccttcctt 100440
>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence Length = 205869 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 cgtctccttccttccttcctttc 46 ||||||||||||||||||||||| Sbjct: 189584 cgtctccttccttccttcctttc 189606
>gb|AC121882.3| Mus musculus BAC clone RP24-135M19 from chromosome 1, complete sequence Length = 173376 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 30363 ctccttccttccttcctttcccc 30385
>gb|AC166601.4| Nomascus leucogenys leucogenys clone CH271-401M10, complete sequence Length = 184404 Score = 46.1 bits (23), Expect = 0.23 Identities = 29/31 (93%) Strand = Plus / Plus Query: 14 tctccgtctccgtctccttccttccttcctt 44 ||||| ||||| ||||||||||||||||||| Sbjct: 131535 tctccttctccttctccttccttccttcctt 131565
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggaggaa 586 ||||||||||||||||| ||||||||| Sbjct: 46266 gaggtagaggaggaagaggaggaggaa 46240
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||| ||||||||||||||||||| Sbjct: 520742 aggaggtggaggaggaagatgaggagg 520716
>gb|DQ388676.1| Acanthamoeba castellanii aspartokinase-related cluster protein mRNA, partial cds Length = 540 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 aggagttcaagcagaagaacccc 376 ||||||||||||||||||||||| Sbjct: 173 aggagttcaagcagaagaacccc 195
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggaggaa 586 ||||||||||||||||| ||||||||| Sbjct: 152173 gaggtagaggaggaagaggaggaggaa 152147
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||||||||||||||| ||||||| Sbjct: 129793 aggaggtagaggaggaagaggaggagg 129819
>gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, complete sequence Length = 200326 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 182383 ctccttccttccttcctttcccc 182361
>dbj|AK088608.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021I18 product:sentrin/SUMO-specific protease, full insert sequence Length = 2220 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 340 gaggaagaggaggaagatgaggaggaa 366
>dbj|AK080518.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730070F13 product:unclassifiable, full insert sequence Length = 1541 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 322 ctccttccttccttcctttcccc 344
>ref|NM_030702.2| Mus musculus SUMO/sentrin specific peptidase 3 (Senp3), mRNA dbj|AK045071.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130024I17 product:sentrin/SUMO-specific protease, full insert sequence Length = 2311 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 428 gaggaagaggaggaagatgaggaggaa 454
>gb|AC104779.4| Homo sapiens BAC clone RP11-26P13 from 4, complete sequence Length = 152861 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttccc 48 ||||||||||||||||||||||| Sbjct: 54168 tctccttccttccttcctttccc 54146
>gb|AC092579.3| Homo sapiens BAC clone RP11-15K19 from 7, complete sequence Length = 118958 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttccc 48 ||||||||||||||||||||||| Sbjct: 23179 tctccttccttccttcctttccc 23201
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcct 43 ||||||||||||||||||||||| Sbjct: 98791 ctccgtctccttccttccttcct 98769 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcct 43 ||||||||||||||||||||||| Sbjct: 98846 ctccgtctccttccttccttcct 98824 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcct 43 ||||||||||||||||||||||| Sbjct: 98901 ctccgtctccttccttccttcct 98879 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ctccgtctccttccttccttcct 43 ||||||||||||||||||||||| Sbjct: 99160 ctccgtctccttccttccttcct 99138
>ref|XM_686814.1| PREDICTED: Danio rerio similar to Esophageal cancer associated protein (LOC563454), mRNA Length = 2037 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 564 tagaggaggaagatgaggaggaa 586 ||||||||||||||||||||||| Sbjct: 73 tagaggaggaagatgaggaggaa 51
>gb|AC087170.6| Homo sapiens chromosome 8, clone RP11-258J10, complete sequence Length = 172443 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttccc 48 ||||||||||||||||||||||| Sbjct: 97404 tctccttccttccttcctttccc 97426
>ref|NM_001030365.1| Gallus gallus v-erb-a erythroblastic leukemia viral oncogene homolog 4 (ERBB4), mRNA gb|DQ069276.1| Gallus gallus chromosome 7 ovarian receptor tyrosine kinase erbB4 precusor (ERBB4) mRNA, complete cds, alternatively spliced Length = 4211 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttcc 47 ||||||||||||||||||||||| Sbjct: 4105 gtctccttccttccttcctttcc 4083
>gb|DQ069275.1| Gallus gallus chromosome 7 ovarian receptor tyrosine kinase erbB4 precusor (ERBB4) mRNA, complete cds, alternatively spliced Length = 4280 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttcc 47 ||||||||||||||||||||||| Sbjct: 4174 gtctccttccttccttcctttcc 4152
>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence Length = 96875 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttcc 47 ||||||||||||||||||||||| Sbjct: 44006 gtctccttccttccttcctttcc 43984
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 139765 gaggaagaggaggaagatgaggaggaa 139739
>emb|AL603707.5| Mouse DNA sequence from clone RP23-422L16 on chromosome 11, complete sequence Length = 234182 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 59837 gaggaagaggaggaagatgaggaggaa 59811
>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the 3' end of the Acac gene for acetyl-Coenzyme A carboxylase, complete sequence Length = 187803 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 559 ggaggtagaggaggaagatgaggagga 585 ||||| ||||||||||||||||||||| Sbjct: 122166 ggaggaagaggaggaagatgaggagga 122192
>gb|AY008764.1| Mus musculus sentrin/SUMO-specific protease (SENP3) mRNA, complete cds Length = 2174 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 283 gaggaagaggaggaagatgaggaggaa 309
>gb|AF194031.1|AF194031 Mus musculus SMT3 isopeptidase 1 (Smt3ip) mRNA, complete cds Length = 1707 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 232 gaggaagaggaggaagatgaggaggaa 258
>gb|AC092600.2| Homo sapiens BAC clone RP11-119J12 from 2, complete sequence Length = 53336 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttcctttc 46 ||||| ||||||||||||||||||||| Sbjct: 12167 tctccctctccttccttccttcctttc 12141
>gb|AC068675.17| Homo sapiens chromosome 17, clone RP11-392O1, complete sequence Length = 164611 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttcctttc 46 |||| |||||||||||||||||||||| Sbjct: 1570 tctctgtctccttccttccttcctttc 1544
>gb|AF261918.1|AF261918 Homo sapiens disintegrin metalloproteinase with thrombospondin repeats (ADAMTS9) mRNA, complete cds Length = 3674 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggagg 584 ||||||||||||||||||| ||||||| Sbjct: 298 aggaggtagaggaggaagaggaggagg 272
>gb|AC004149.1|AC004149 Homo sapiens chromosome 17, clone hCIT.501_O_10, complete sequence Length = 84767 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 tctccgtctccttccttccttcctttc 46 |||| |||||||||||||||||||||| Sbjct: 46843 tctctgtctccttccttccttcctttc 46869
>ref|XM_445753.1| Candida glabrata CBS138, CAGL0E01485g partial mRNA Length = 4011 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggaggaa 586 |||| |||||||||||||||||||||| Sbjct: 3076 gaggaagaggaggaagatgaggaggaa 3102
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 46.1 bits (23), Expect = 0.23 Identities = 29/31 (93%) Strand = Plus / Plus Query: 14 tctccgtctccgtctccttccttccttcctt 44 ||||| ||||| ||||||||||||||||||| Sbjct: 106360 tctccctctccctctccttccttccttcctt 106390
>gb|AF121963.1|AF121963 Gallus gallus receptor tyrosine kinase precursor (erbB4) mRNA, partial cds Length = 4610 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttcc 47 ||||||||||||||||||||||| Sbjct: 3626 gtctccttccttccttcctttcc 3604
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 ggaggtagaggaggaagatgaggagga 585 ||||| ||||||||||||||||||||| Sbjct: 97297 ggaggaagaggaggaagatgaggagga 97271
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Minus Query: 530 gctgctgccccaaagaaggccgctgcc 556 ||||||||||| ||||||||||||||| Sbjct: 2147082 gctgctgcccccaagaaggccgctgcc 2147056
>gb|AC093241.4| Homo sapiens chromosome 5 clone RP11-104B22, complete sequence Length = 56726 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 ctccttccttccttcctttcccc 49 ||||||||||||||||||||||| Sbjct: 30611 ctccttccttccttcctttcccc 30589
>gb|U41196.1|HSU41196 Human (TTTC)5 short tandem repeat polymorphism UM69, D17S1339 Length = 380 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 tctccgtctccttccttccttcctttc 46 |||| |||||||||||||||||||||| Sbjct: 155 tctctgtctccttccttccttcctttc 181
>gb|DQ245258.1| Zea mays clone 14073 mRNA sequence Length = 899 Score = 44.1 bits (22), Expect = 0.89 Identities = 43/50 (86%) Strand = Plus / Plus Query: 315 cgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaag 364 |||||| |||||||||| ||||||||| ||| ||| | ||||||||||| Sbjct: 348 cgcccaccgccttcttcctcttcatggacgacttcaggaaggagttcaag 397
>gb|AC188689.3| Pan troglodytes BAC clone CH251-736H16 from chromosome 7, complete sequence Length = 188648 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 56045 tctccttccttccttcctttcc 56066
>gb|AC132112.5| Mus musculus BAC clone RP24-207F16 from chromosome 14, complete sequence Length = 155581 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 30573 tccttccttccttcctttcccc 30552
>emb|CR456627.10| Zebrafish DNA sequence from clone CH211-63G19 in linkage group 12, complete sequence Length = 94602 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 80375 tccttccttccttcctttcccc 80396
>ref|XM_001226981.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09055) mRNA, complete cds Length = 3243 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 544 gaaggccgctgccaaggaggtagaggagga 573 |||||||||||||| ||||| ||||||||| Sbjct: 1686 gaaggccgctgccatggagggagaggagga 1715
>dbj|AK243263.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100049C12, full insert sequence Length = 2128 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 caagtccgtcgccgccgtcggc 403 |||||||||||||||||||||| Sbjct: 833 caagtccgtcgccgccgtcggc 854
>ref|NM_001075014.1| Oryza sativa (japonica cultivar-group) Os11g0687200 (Os11g0687200) mRNA, complete cds Length = 2181 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 caagtccgtcgccgccgtcggc 403 |||||||||||||||||||||| Sbjct: 796 caagtccgtcgccgccgtcggc 817
>gb|BT027025.1| Gasterosteus aculeatus clone CFW154-B04 mRNA sequence Length = 2674 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 556 caaggaggtagaggaggaagatgaggagga 585 |||||||| |||||||||||||||||||| Sbjct: 1045 caaggaggaggaggaggaagatgaggagga 1074
>gb|AC189973.1| Gasterosteus aculeatus clone VMRC26-65P02, complete sequence Length = 174887 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggagga 585 ||||||||||||||||| |||||||| Sbjct: 152382 gaggtagaggaggaagaggaggagga 152357
>tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 544143 agaggaggaagatgaggaggaa 544122
>gb|AC186051.8| Canis Familiaris chromosome 5, clone XX-212F17, complete sequence Length = 188055 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 24244 tccttccttccttcctttcccc 24265
>gb|AC183558.3| Canis Familiaris chromosome 33, clone XX-400H14, complete sequence Length = 176073 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 ctccgtctccttccttccttcctttc 46 |||| ||||||||||||||||||||| Sbjct: 142855 ctccctctccttccttccttcctttc 142880
>ref|XM_001059711.1| PREDICTED: Rattus norvegicus similar to BCL6 co-repressor-like 1 (predicted) (RGD1566108_predicted), mRNA Length = 6765 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 4133 agaggaggaagatgaggaggaa 4154
>ref|XM_217627.4| PREDICTED: Rattus norvegicus similar to BCL6 co-repressor-like 1 (predicted) (RGD1566108_predicted), mRNA Length = 6601 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 3969 agaggaggaagatgaggaggaa 3990
>ref|XM_001075539.1| PREDICTED: Rattus norvegicus hypothetical protein LOC690765 (LOC690765), mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 454 aaggaggaagaggaggaagaggaggaggaa 483
>emb|CT573165.5| Zebrafish DNA sequence from clone DKEY-31K9 in linkage group 19, complete sequence Length = 70864 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggagga 585 |||| ||||||||||||||||||||| Sbjct: 26493 gagggagaggaggaagatgaggagga 26468
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 14840 tctccttccttccttcctttcc 14819
>gb|AY956392.1| Squalus acanthias acid-sensing ion channel 1 transcript variant 2 (ACCN2) mRNA, complete cds, alternatively spliced Length = 1888 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 289 agaggaggaagatgaggaggaa 310
>emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 map Xq28, complete sequence Length = 178731 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 17635 tctccttccttccttcctttcc 17656
>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete sequence Length = 180569 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 149565 tctccttccttccttcctttcc 149586
>gb|AC154521.2| Mus musculus BAC clone RP23-473O6 from chromosome 13, complete sequence Length = 211603 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 36171 tccttccttccttcctttcccc 36192
>gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosome 17, complete sequence Length = 203927 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 3073 tccttccttccttcctttcccc 3052
>gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106 (nfd106) mRNA, complete cds Length = 625 Score = 44.1 bits (22), Expect = 0.89 Identities = 43/50 (86%) Strand = Plus / Plus Query: 315 cgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaag 364 |||||| |||||||||| ||||||||| ||| ||| | ||||||||||| Sbjct: 128 cgcccaccgccttcttcctcttcatggacgacttcaggaaggagttcaag 177
>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence Length = 183087 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 66790 tccttccttccttcctttcccc 66769
>gb|AC158909.6| Mus musculus chromosome 1, clone RP23-118K4, complete sequence Length = 218810 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 163162 tctccttccttccttcctttcc 163141
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttcctttcccc 49 ||||| ||| |||||||||||||||||||| Sbjct: 28111 tctccctcttcttccttccttcctttcccc 28082
>ref|NM_001006040.1| Danio rerio zgc:103426 (zgc:103426), mRNA gb|BC083373.1| Danio rerio zgc:103426, mRNA (cDNA clone MGC:103426 IMAGE:7233563), complete cds Length = 1095 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 gaggtagaggaggaagatgaggagga 585 ||||||||||| |||||||||||||| Sbjct: 220 gaggtagaggatgaagatgaggagga 195
>gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, complete sequence Length = 176594 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 53559 tccttccttccttcctttcccc 53538
>ref|XM_586716.2| PREDICTED: Bos taurus similar to zinc finger and BTB domain containing 9 (LOC539371), mRNA Length = 1449 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Plus Query: 560 gaggtagaggaggaagatgaggagga 585 |||| ||||||||||||||||||||| Sbjct: 673 gaggaagaggaggaagatgaggagga 698
>gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome 8, complete sequence Length = 192627 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 79180 aaggaggaagaggaggaagaggaggaggaa 79209
>ref|XM_715654.1| Candida albicans SC5314 hypothetical protein (CaO19_11788), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 348 agaggaggaagatgaggaggaa 327
>ref|XM_715653.1| Candida albicans SC5314 hypothetical protein (CaO19_11787), mRNA Length = 2307 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 207 agaggaggaagatgaggaggaa 228
>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence Length = 160229 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 90968 tctccttccttccttcctttcc 90989 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 91132 tctccttccttccttcctttcc 91153
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaat 587 |||||| |||||||||||| |||||||||| Sbjct: 6574 aggaggaagaggaggaagaggaggaggaat 6603
>gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome 7, complete sequence Length = 215384 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 91506 tccttccttccttcctttcccc 91527
>gb|AC120843.11| Mus musculus chromosome 12, clone RP23-71C5, complete sequence Length = 220627 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 171244 tccttccttccttcctttcccc 171223
>gb|AC147337.3| Pan troglodytes BAC clone CH251-104M9 from Y, complete sequence Length = 168027 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 117317 tctccttccttccttcctttcc 117338
>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence Length = 205920 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 93053 tccttccttccttcctttcccc 93074
>gb|AC147227.4| Mus musculus BAC clone RP23-153H22 from chromosome 18, complete sequence Length = 204482 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 15 ctccgtctccgtctccttccttccttcctt 44 |||| |||| |||||||||||||||||||| Sbjct: 197853 ctccctctctgtctccttccttccttcctt 197824
>gb|AC127588.3| Mus musculus BAC clone RP23-106G21 from chromosome 18, complete sequence Length = 180320 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 155135 tccttccttccttcctttcccc 155156
>gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosome 17, complete sequence Length = 189458 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 71050 aaggaggaagaggaggaagaagaggaggaa 71079
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccttgtctccgtctccgtctcc 30 |||||||||||||||||||||| Sbjct: 104721 ccttgtctccgtctccgtctcc 104742
>ref|XM_843253.1| PREDICTED: Canis familiaris hypothetical protein LOC606822 (LOC606822), mRNA Length = 3393 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaat 587 |||||| ||||||||||||||||| ||||| Sbjct: 1133 aggaggaagaggaggaagatgaggtggaat 1162
>gb|AC009412.6| Homo sapiens BAC clone RP11-425P5 from 7, complete sequence Length = 212827 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ctccttccttccttcctttccc 48 |||||||||||||||||||||| Sbjct: 60531 ctccttccttccttcctttccc 60552
>gb|AC113542.13| Mus musculus chromosome 5, clone RP23-195A18, complete sequence Length = 215127 Score = 44.1 bits (22), Expect = 0.89 Identities = 31/34 (91%) Strand = Plus / Plus Query: 11 ttgtctccgtctccgtctccttccttccttcctt 44 |||| ||||| ||||| ||||||||||||||||| Sbjct: 56144 ttgtttccgtttccgtttccttccttccttcctt 56177
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 15144 tccttccttccttcctttcccc 15123
>gb|AC147341.2| Pan troglodytes BAC clone CH251-31E16 from Y, complete sequence Length = 193163 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 6181 gtctccttccttccttcctttc 6160
>gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome 8, complete sequence Length = 218715 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 205401 tccttccttccttcctttcccc 205422
>gb|AC140782.4| Mus musculus BAC clone RP24-417N13 from chromosome 7, complete sequence Length = 196282 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 129020 gtctccttccttccttcctttc 128999
>gb|AC146215.2| Pan troglodytes BAC clone CH251-299B14 from Y, complete sequence Length = 163780 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 42119 tctccttccttccttcctttcc 42140
>gb|AC146484.3| Pan troglodytes BAC clone CH251-454A18 from Y, complete sequence Length = 205077 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 12462 gtctccttccttccttcctttc 12483
>gb|AC127233.2| Mus musculus BAC clone RP24-559K11 from chromosome 3, complete sequence Length = 160255 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 100211 tccttccttccttcctttcccc 100232
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatgaggaggaat 587 |||||| |||||||||||| |||||||||| Sbjct: 59721 aggaggaagaggaggaagaggaggaggaat 59692
>gb|AC127414.4| Mus musculus BAC clone RP23-246P24 from chromosome 7, complete sequence Length = 218222 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 101197 gtctccttccttccttcctttc 101176
>gb|AC124748.5| Mus musculus BAC clone RP23-261I7 from chromosome 17, complete sequence Length = 184968 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 165638 tccttccttccttcctttcccc 165617
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 159026 tccttccttccttcctttcccc 159047
>gb|AC117251.3| Mus musculus BAC clone RP24-372C12 from chromosome 8, complete sequence Length = 191927 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 135248 tctccttccttccttcctttcc 135269
>gb|AC122514.4| Mus musculus BAC clone RP24-455L10 from chromosome 8, complete sequence Length = 171839 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 9795 tccttccttccttcctttcccc 9816
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 184706 tccttccttccttcctttcccc 184685
>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence Length = 231319 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 201271 tccttccttccttcctttcccc 201250
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 51301 agaggaggaagatgaggaggaa 51280
>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence Length = 229072 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 147138 tccttccttccttcctttcccc 147117
>gb|AC126805.4| Mus musculus BAC clone RP23-109A15 from 13, complete sequence Length = 177083 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 gtctccgtctccgtctccttcc 34 |||||||||||||||||||||| Sbjct: 41136 gtctccgtctccgtctccttcc 41157
>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence Length = 160892 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 126748 aaggagggagaggaggaagaggaggaggaa 126719 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggagga 585 ||||||| |||||||||||| |||||||| Sbjct: 126907 aaggagggagaggaggaagaggaggagga 126879
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 15049 tccttccttccttcctttcccc 15070
>gb|AC121837.2| Mus musculus BAC clone RP24-74E24 from 5, complete sequence Length = 179290 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 6583 gtctccttccttccttcctttc 6604
>gb|AC122054.2| Mus musculus BAC clone RP24-465D10 from 5, complete sequence Length = 128158 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 41540 gtctccttccttccttcctttc 41561
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 556 caaggaggtagaggaggaagatgaggagga 585 |||||||| |||||||||||||||||||| Sbjct: 61843 caaggaggaggaggaggaagatgaggagga 61814 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 556 caaggaggtagaggaggaagatgaggagga 585 |||||||| |||||||||||||||||||| Sbjct: 61990 caaggaggaggaggaggaagatgaggagga 61961 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggagga 585 ||||||| |||||||||||||||||||| Sbjct: 61878 aaggaggaggaggaggaagatgaggagga 61850 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggagga 585 ||||||| |||||||||||||||||||| Sbjct: 62025 aaggaggaggaggaggaagatgaggagga 61997 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggagga 585 ||||||| |||||||||||||||||||| Sbjct: 62154 aaggaggaggaggaggaagatgaggagga 62126
>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence Length = 197927 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 58620 aaggagggagaggaggaagaggaggaggaa 58591 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 aaggaggtagaggaggaagatgaggagga 585 ||||||| |||||||||||| |||||||| Sbjct: 58779 aaggagggagaggaggaagaggaggagga 58751
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 135112 aaggaggaagaggaggaagaagaggaggaa 135141
>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence Length = 188853 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 113958 tccttccttccttcctttcccc 113937
>gb|AC161876.3| Mus musculus BAC clone RP24-388H6 from chromosome 1, complete sequence Length = 174149 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 103282 aaggaggaagaggaggaagaggaggaggaa 103311
>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence Length = 199388 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 120658 aaggaggaagaggaggaagaagaggaggaa 120687
>gb|AC096792.12| Rattus norvegicus 7 BAC CH230-8O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 205454 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 557 aaggaggtagaggaggaagatgaggaggaa 586 ||||||| |||||||||||| ||||||||| Sbjct: 37291 aaggaggaagaggaggaagaggaggaggaa 37320
>gb|AC115873.8| Mus musculus, clone RP24-349F22, complete sequence Length = 159466 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 15 ctccgtctccgtctccttccttccttcctt 44 |||| |||| |||||||||||||||||||| Sbjct: 115886 ctccctctctgtctccttccttccttcctt 115857
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 558 aggaggtagaggaggaagatga 579 |||||||||||||||||||||| Sbjct: 1119557 aggaggtagaggaggaagatga 1119536
>gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-218B2, complete sequence Length = 195281 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 134320 agaggaggaagatgaggaggaa 134299
>gb|AC069243.16| Homo sapiens 3 BAC RP11-407H3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190909 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 175163 tctccttccttccttcctttcc 175184
>gb|AC084806.14| Homo sapiens 12q BAC RP11-569E15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67717 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 54976 tccttccttccttcctttcccc 54997
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 caagtccgtcgccgccgtcggc 403 |||||||||||||||||||||| Sbjct: 20100 caagtccgtcgccgccgtcggc 20121
>gb|AC129263.6| Rattus norvegicus 2 BAC CH230-258E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 194958 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 61326 tccttccttccttcctttcccc 61305
>dbj|AK137266.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530083L17 product:unclassifiable, full insert sequence Length = 3746 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 185 tccttccttccttcctttcccc 206
>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence Length = 201842 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 96030 tccttccttccttcctttcccc 96051
>gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, complete sequence Length = 137691 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 38825 tctccttccttccttcctttcc 38804
>gb|AC110594.5| Homo sapiens chromosome 17, clone CTD-2193J24, complete sequence Length = 159490 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cgtctccttccttccttccttt 45 |||||||||||||||||||||| Sbjct: 10744 cgtctccttccttccttccttt 10765
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 20594 tccttccttccttcctttcccc 20615
>gb|AC048351.18| Homo sapiens 3 BAC RP11-175P19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161687 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ctccttccttccttcctttccc 48 |||||||||||||||||||||| Sbjct: 11977 ctccttccttccttcctttccc 11956
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence Length = 189532 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttccttt 45 ||||| |||||||||||||||||||| Sbjct: 27765 tctccctctccttccttccttccttt 27740
>gb|AC153149.4| Mus musculus BAC clone RP23-176O2 from chromosome 3, complete sequence Length = 206540 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 25972 tccttccttccttcctttcccc 25951
>dbj|AK145764.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0038N17 product:unclassifiable, full insert sequence Length = 3150 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ccgtctccttccttccttcctt 44 |||||||||||||||||||||| Sbjct: 1773 ccgtctccttccttccttcctt 1794
>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence Length = 177251 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ctccttccttccttcctttccc 48 |||||||||||||||||||||| Sbjct: 103869 ctccttccttccttcctttccc 103848
>gb|AC104162.2| Homo sapiens chromosome 3 clone RP11-50F24, complete sequence Length = 178337 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 137111 tctccttccttccttcctttcc 137132
>gb|AC008737.11| Homo sapiens chromosome 19 clone CTD-2538G9, complete sequence Length = 248281 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 67186 tctccttccttccttcctttcc 67165 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttc 46 ||||||||||||||||||||| Sbjct: 221993 tctccttccttccttcctttc 222013
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttcctttcccc 49 ||||| ||| |||||||||||||||||||| Sbjct: 161641 tctccctcttcttccttccttcctttcccc 161612
>ref|NM_001034305.1| Bos taurus similar to 1810010N17Rik protein (MGC127184), mRNA gb|BC102209.1| Bos taurus similar to 1810010N17Rik protein, mRNA (cDNA clone MGC:127184 IMAGE:7944527), complete cds Length = 794 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 565 agaggaggaagatgaggaggaa 586 |||||||||||||||||||||| Sbjct: 460 agaggaggaagatgaggaggaa 481
>gb|AC022706.7| Homo sapiens chromosome , clone RP11-47L3, complete sequence Length = 162474 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 2761 tctccttccttccttcctttcc 2740
>gb|AE005871.1| Caulobacter crescentus CB15 section 197 of 359 of the complete genome Length = 10070 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 cgccaaggccgacaccaagttggcgg 233 ||||||||||||||||||| |||||| Sbjct: 9427 cgccaaggccgacaccaagctggcgg 9402
>gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, complete sequence Length = 143479 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 88607 tctccttccttccttcctttcc 88628
>gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, complete sequence Length = 127680 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 83381 tctccttccttccttcctttcc 83360
>ref|XM_805720.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507547.70) partial mRNA Length = 2346 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 87 tccttccttccttcctttcccc 66
>emb|CR848714.6| Wallaby DNA sequence from clone MEKBa-460J13, complete sequence Length = 186287 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 145665 tccttccttccttcctttcccc 145644
>gb|AC093166.6| Homo sapiens BAC clone RP11-1429F20 from 2, complete sequence Length = 213865 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 86413 tctccttccttccttcctttcc 86392
>gb|AC093908.3| Homo sapiens BAC clone RP11-752L20 from 4, complete sequence Length = 164920 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gtctccttccttccttcctttc 46 |||||||||||||||||||||| Sbjct: 109349 gtctccttccttccttcctttc 109328
>gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complete sequence Length = 192263 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 70270 tctccttccttccttcctttcc 70249
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 caagtccgtcgccgccgtcggc 403 |||||||||||||||||||||| Sbjct: 26966812 caagtccgtcgccgccgtcggc 26966833 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 gaggaggaagatgaggaggaa 586 ||||||||||||||||||||| Sbjct: 1815898 gaggaggaagatgaggaggaa 1815918
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 tctccgtctccttccttccttcctttcccc 49 ||||| ||| |||||||||||||||||||| Sbjct: 5156340 tctccctcttcttccttccttcctttcccc 5156311
>gb|AF319039.1|AF319039 Pelagophycus porra 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, complete sequences; and 26S ribosomal RNA gene, partial sequence Length = 955 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 892 tctccttccttccttcctttcc 871
>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence Length = 194729 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ctccttccttccttcctttccc 48 |||||||||||||||||||||| Sbjct: 16234 ctccttccttccttcctttccc 16213
>emb|AL591898.1| Human DNA sequence from clone RP11-409K12 on chromosome 1 Contains the 5' end of the FH gene for fumarate hydratase, the 5' end of the KMO gene for kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) and a CpG island, complete sequence Length = 70011 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ccgtctccttccttccttcctt 44 |||||||||||||||||||||| Sbjct: 12984 ccgtctccttccttccttcctt 13005
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence Length = 181991 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 53080 tctccttccttccttcctttcc 53101
>emb|AL162399.12| Human DNA sequence from clone RP11-545I10 on chromosome 1 Contains the 5' end of a novel gene, the gene for NTKL-binding protein 1 and a novel gene, complete sequence Length = 91639 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 86971 tccttccttccttcctttcccc 86950
>gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, complete sequence Length = 215786 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 142130 tctccttccttccttcctttcc 142109
>emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chromosome 13 Contains a novel gene, the IRS2 gene for insulin receptor substrate 2 and two CpG islands, complete sequence Length = 143409 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 caggagcgccctccccacccca 80 |||||||||||||||||||||| Sbjct: 127578 caggagcgccctccccacccca 127599
>emb|AL162397.14| Human DNA sequence from clone RP11-86C4 on chromosome 9, complete sequence Length = 121963 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 558 aggaggtagaggaggaagatgaggaggaat 587 |||||| |||||||||||| |||||||||| Sbjct: 115305 aggaggaagaggaggaagaagaggaggaat 115334
>emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chromosome 6 Contains a novel gene and a 26S proteasome-associated PAD1 homolog POH1 pseudogene, complete sequence Length = 72312 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 63217 tctccttccttccttcctttcc 63238
>emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3 gene for PTMA (prothymosin, alpha) pseudogene 3, the 3' end of the ZNF339 gene for zinc finger protein 339 and two CpG islands, complete sequence Length = 139953 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 138939 tctccttccttccttcctttcc 138918
>emb|AL121939.12|HSDJ223E3 Human DNA sequence from clone RP1-223E3 on chromosome 6q13-15 Contains the gene for a novel protein similar to serine protease 23 (PRSS23, ZSIG13), complete sequence Length = 59621 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 54520 tctccttccttccttcctttcc 54541
>gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly factor D (nfd106) mRNA, complete cds Length = 655 Score = 44.1 bits (22), Expect = 0.89 Identities = 43/50 (86%) Strand = Plus / Plus Query: 315 cgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaag 364 |||||| |||||||||| ||||||||| ||| ||| | ||||||||||| Sbjct: 130 cgcccaccgccttcttcctcttcatggacgacttcaggaaggagttcaag 179
>gb|AF352124.1|AF352124 Pelagophycus porra internal transcribed spacer 2, complete sequence Length = 349 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 tctccttccttccttcctttcc 47 |||||||||||||||||||||| Sbjct: 308 tctccttccttccttcctttcc 287
>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence Length = 159749 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Minus Query: 779 tgctccttgcggtgttagggtg 800 |||||||||||||||||||||| Sbjct: 21624 tgctccttgcggtgttagggtg 21603
>gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome 13, complete sequence Length = 143739 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 141355 tccttccttccttcctttcccc 141376
>gb|AC159202.2| Mus musculus BAC clone RP23-297L21 from chromosome 12, complete sequence Length = 210589 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 tccttccttccttcctttcccc 49 |||||||||||||||||||||| Sbjct: 134550 tccttccttccttcctttcccc 134571
>gb|AC153130.4| Mus musculus BAC clone RP24-252F22 from chromosome 13, complete sequence Length = 186412 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 gtctccgtctccgtctccttcc 34 |||||||||||||||||||||| Sbjct: 141406 gtctccgtctccgtctccttcc 141427 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 144,786,025 Number of extensions: 9358011 Number of successful extensions: 915751 Number of sequences better than 10.0: 1493 Number of HSP's gapped: 915730 Number of HSP's successfully gapped: 1668 Length of query: 935 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 912 Effective length of database: 18,503,978,556 Effective search space: 16875628443072 Effective search space used: 16875628443072 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
