ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf77i16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106169:Os05g0494900 | 33 | 1.5 | 2 | AK100192:Os01g0726700 | 33 | 1.5 | 3 | AK067073:Os07g0176600 | 32 | 1.9 | 4 | AK066812:Os07g0176600 | 32 | 1.9 | 5 | Os08g0317300:Os08g0317300 | 32 | 3.2 | 6 | AK099276:Os03g0568800 | 31 | 4.2 | 7 | AK070389:Os03g0568800 | 31 | 4.2 | 8 | AK100470:Os03g0340700 | 31 | 5.5 | 9 | AK072052:Os02g0276500 | 31 | 5.5 | 10 | AK070642:Os03g0123300 | 30 | 7.2 | 11 | Os02g0738800:Os02g0738800 | 30 | 7.2 | 12 | AK119480:Os06g0202800 | 30 | 7.2 | 13 | AK072188:Os09g0537100 | 30 | 7.2 | 14 | AK059854:Os02g0759900 | 30 | 9.4 |
|---|
>AK106169:Os05g0494900 | Length = 276 Score = 32.7 bits (73), Expect = 1.5 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -3 Query: 490 GTSWATPLGGLDGSPTGWGHLLGLSSTPRGRPRALLRCSSPATGCNSRALRHENGSRG 317 G W TP GG DG GWG G S+ +P G +A+ ++G G Sbjct: 218 GGGWGTPAGGSDGGGGGWGAAPGGSN------------DAPGWGSGKKAVPAQDGGSG 263
>AK100192:Os01g0726700 | Length = 662 Score = 32.7 bits (73), Expect = 1.5 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Frame = -3 Query: 1537 PVSPGLCCQGKP*DGEAPTSPSMGSNYAACYMGV--PLP-LGPRPETP------MPPDRM 1385 P +PG C P +AP SPS ++ G P P +G P TP PP Sbjct: 449 PSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGYYPPTPSIGTSPSTPGTGGGYYPPSPS 508 Query: 1384 T-GFSSAPQIPSSRP 1343 T G++ P +P S P Sbjct: 509 TGGYTPTPDVPISTP 523
>AK067073:Os07g0176600 | Length = 585 Score = 32.3 bits (72), Expect = 1.9 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Frame = -1 Query: 408 PAEDPGRCSGAPRRRLAATLVR*GTRMDPGGFDDPPCSFHGRGGD*SRRWCKLQRTTPSA 229 PA P R S PR RL +P +FH R + C L+R + Sbjct: 363 PAPTPRRASSTPRIRL-----------------EPSKTFHARAAETPPSKCSLERASQPT 405 Query: 228 PRATSP---MVEPERNREVEWVCDIEWELLAVTGPR 130 RA++P + PE+ + + + ++ ++V PR Sbjct: 406 RRASTPVNMLQTPEKRQGADILTRLKSPDVSVNSPR 441
>AK066812:Os07g0176600 | Length = 585 Score = 32.3 bits (72), Expect = 1.9 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Frame = -1 Query: 408 PAEDPGRCSGAPRRRLAATLVR*GTRMDPGGFDDPPCSFHGRGGD*SRRWCKLQRTTPSA 229 PA P R S PR RL +P +FH R + C L+R + Sbjct: 363 PAPTPRRASSTPRIRL-----------------EPSKTFHARAAETPPSKCSLERASQPT 405 Query: 228 PRATSP---MVEPERNREVEWVCDIEWELLAVTGPR 130 RA++P + PE+ + + + ++ ++V PR Sbjct: 406 RRASTPVNMLQTPEKRQGADILTRLKSPDVSVNSPR 441
>Os08g0317300:Os08g0317300 | Length = 359 Score = 31.6 bits (70), Expect = 3.2 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +2 Query: 2420 ACHWLLSWPDFTREEHDAIYPET--*ELRIEAS*YRNLSRSVVPVGMEFHGHRRFL 2581 A H LSWP+F R+ YP T L+I+ + Y +SV + F+ RF+ Sbjct: 117 AAHGPLSWPEFVRQFERRFYPATFLDRLKIDLNNYTQEKKSVAEYEVGFNQIVRFV 172
>AK099276:Os03g0568800 | Length = 675 Score = 31.2 bits (69), Expect = 4.2 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Frame = -3 Query: 1549 PP*IPVSPGLCCQGKP*DGEAPTSPSMGS--NYAACYMGVPLPLGPRPETPMPPDRMTGF 1376 PP P +P P ++P SPS S A+ + P P P +P PP + Sbjct: 52 PPPPPATPPPPPPASPGKNQSPASPSQDSPPPVASPSVSSPPPAPTTPPSPPPPSKSPPP 111 Query: 1375 SSAPQIPSSRP 1343 S P SS P Sbjct: 112 PSPPPTTSSTP 122
>AK070389:Os03g0568800 | Length = 675 Score = 31.2 bits (69), Expect = 4.2 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Frame = -3 Query: 1549 PP*IPVSPGLCCQGKP*DGEAPTSPSMGS--NYAACYMGVPLPLGPRPETPMPPDRMTGF 1376 PP P +P P ++P SPS S A+ + P P P +P PP + Sbjct: 52 PPPPPATPPPPPPASPGKNQSPASPSQDSPPPVASPSVSSPPPAPTTPPSPPPPSKSPPP 111 Query: 1375 SSAPQIPSSRP 1343 S P SS P Sbjct: 112 PSPPPTTSSTP 122
>AK100470:Os03g0340700 | Length = 492 Score = 30.8 bits (68), Expect = 5.5 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = -3 Query: 490 GTSW--ATPLGGLD----GSPTGWGHLLG--LSSTPRGRPRALLRCSSPATGCNSRALRH 335 G SW A P GL +P + LLG L S+ RG+P A LR S+P T + A + Sbjct: 101 GRSWSSAAPSSGLGIPQANNPGLFSDLLGSALGSSSRGQPNAPLRSSAPQTYKPANANPN 160 Query: 334 ENGS 323 +GS Sbjct: 161 PSGS 164
>AK072052:Os02g0276500 | Length = 470 Score = 30.8 bits (68), Expect = 5.5 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 247 LELAPPATSVS-PTPVETTRRIVKAPWIHSRASAHESCSQSPARSTGAAPWVF 402 ++LA A +VS P P RR AP H RA A + S SP+ ST A V+ Sbjct: 1 MDLAAAAVAVSFPRPAPPPRRC--APRRHRRALAPRAASSSPSPSTAVAAPVY 51
>AK070642:Os03g0123300 | Length = 523 Score = 30.4 bits (67), Expect = 7.2 Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%) Frame = +2 Query: 257 HHRRLQSPPRPWKLQGGSSKPPGSILVPQRTRVAASRRR---GAPEQRPGSSA 406 HH PPR SSKPP P AA R AP P SSA Sbjct: 5 HHHLPPPPPRSPMENSASSKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSA 57
>Os02g0738800:Os02g0738800 | Length = 289 Score = 30.4 bits (67), Expect = 7.2 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = +1 Query: 253 LAPPATSVSPTPV----ETTRRIVKAPWIHSRASAHESCSQSPARS 378 LAPP S+SP+P E RR+ +P SR ++H+ +P+R+ Sbjct: 31 LAPPPPSLSPSPTSPPPELARRLRSSP-PESRRASHDGSGGAPSRA 75
>AK119480:Os06g0202800 | Length = 247 Score = 30.4 bits (67), Expect = 7.2 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 1252 HLTFRAATSLPEREYGLVGHKHITRYTSSSG 1344 HL ++ LP+ EYG + + HIT + +S+G Sbjct: 158 HLYYQPIRRLPQGEYGYLKNMHITGFVASTG 188
>AK072188:Os09g0537100 | Length = 117 Score = 30.4 bits (67), Expect = 7.2 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +1 Query: 271 SVSPTPVETTRRIVKAPWIHSRASAHESCSQSPARSTGAAPWVFR-GGLRTNPTGGPNLS 447 S SPT +T +AP + AS+ S S S ARS P + R RT+ LS Sbjct: 51 STSPTARSSTAPTPQAPTVPLPASSTLSTSPSTARSAPLLPRLHRLSSCRTSTMTRLRLS 110 Query: 448 VSHPSP 465 PSP Sbjct: 111 TPKPSP 116
>AK059854:Os02g0759900 | Length = 205 Score = 30.0 bits (66), Expect = 9.4 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = +3 Query: 300 KEDRQSPLDPFSCLSARELQPVAGEEHRSSALGLPRGVEDKPNRWPQPVGEPSKPPSGVA 479 + +R P + C SA PV EE S++ EDKP+ P P E S+ + V+ Sbjct: 41 RSNRHLPTRGWRCASAAAPDPVPSEEPASASASTVVVTEDKPD--PPPAEEKSEEVAAVS 98 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 90,519,677 Number of extensions: 2327654 Number of successful extensions: 7525 Number of sequences better than 10.0: 14 Number of HSP's gapped: 7473 Number of HSP's successfully gapped: 14 Length of query: 956 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 846 Effective length of database: 10,995,345 Effective search space: 9302061870 Effective search space used: 9302061870 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
