| Clone Name | FLbaf77i16 |
|---|---|
| Clone Library Name | barley_pub |
>P37370:VRP1_YEAST Verprolin - Saccharomyces cerevisiae (Baker's yeast)| Length = 817 Score = 35.8 bits (81), Expect = 1.0 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Frame = -3 Query: 1489 APTSPSMGSNYAACYMGVPLPLGPR----PETPMPPDRMTGFSSAPQIPSSRPH 1340 AP PS+ S+ A +P P P +P PP ++G +SAP++P +RPH Sbjct: 143 APAVPSIPSSSAPPIPDIPSSAAPPIPIVPSSPAPPLPLSG-ASAPKVPQNRPH 195
>O46392:CO1A2_CANFA Collagen alpha-2(I) chain precursor - Canis familiaris (Dog)| Length = 1366 Score = 34.3 bits (77), Expect = 3.0 Identities = 20/49 (40%), Positives = 23/49 (46%) Frame = -3 Query: 1510 GKP*DGEAPTSPSMGSNYAACYMGVPLPLGPRPETPMPPDRMTGFSSAP 1364 G P P P +G N+AA Y G + LGP P M P G S AP Sbjct: 60 GPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGASGAP 108
>P08123:CO1A2_HUMAN Collagen alpha-2(I) chain precursor - Homo sapiens (Human)| Length = 1366 Score = 33.1 bits (74), Expect = 6.7 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = -3 Query: 1510 GKP*DGEAPTSPSMGSNYAACYMGVPLPLGPRPETPMPPDRMTGFSSAP 1364 G P P P +G N+AA Y G + LGP P M P G + AP Sbjct: 60 GPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAP 108
>Q5TM26:BAT2_MACMU Large proline-rich protein BAT2 - Macaca mulatta (Rhesus macaque)| Length = 2160 Score = 33.1 bits (74), Expect = 6.7 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 12/84 (14%) Frame = +1 Query: 256 APPATSVSPTPVETTRRIVKAPWIHSRASA-------HESCSQSPARST-----GAAPWV 399 APPA +P P + + AP S ASA ES PA+ T AAP + Sbjct: 510 APPAAPSTPAPPPAVPKELPAPLAPSPASAPTPEKEPEESAQAPPAQCTPTPGVAAAPTL 569 Query: 400 FRGGLRTNPTGGPNLSVSHPSPRV 471 GG T+ T + S P++ Sbjct: 570 VSGGGSTSSTSSGSFEASPVEPQL 593
>Q05859:FMN1B_MOUSE Formin-1, isoform IV - Mus musculus (Mouse)| Length = 1206 Score = 32.7 bits (73), Expect = 8.7 Identities = 24/75 (32%), Positives = 31/75 (41%) Frame = -3 Query: 1558 PFLPP*IPVSPGLCCQGKP*DGEAPTSPSMGSNYAACYMGVPLPLGPRPETPMPPDRMTG 1379 P +PP P+ PGL G P +P + C + P P P P TP+PP G Sbjct: 656 PLIPPPPPLPPGL--------GPLPPAPPIPP---VCPVSPPPPPPPPPPTPVPPS--DG 702 Query: 1378 FSSAPQIPSSRPHYL 1334 P P P+ L Sbjct: 703 PPPPPPPPPPLPNVL 717
>Q05860:FMN1A_MOUSE Formin-1, isoforms I/II/III - Mus musculus (Mouse)| Length = 1468 Score = 32.7 bits (73), Expect = 8.7 Identities = 24/75 (32%), Positives = 31/75 (41%) Frame = -3 Query: 1558 PFLPP*IPVSPGLCCQGKP*DGEAPTSPSMGSNYAACYMGVPLPLGPRPETPMPPDRMTG 1379 P +PP P+ PGL G P +P + C + P P P P TP+PP G Sbjct: 882 PLIPPPPPLPPGL--------GPLPPAPPIPP---VCPVSPPPPPPPPPPTPVPPS--DG 928 Query: 1378 FSSAPQIPSSRPHYL 1334 P P P+ L Sbjct: 929 PPPPPPPPPPLPNVL 943
>Q86T65:DAAM2_HUMAN Disheveled-associated activator of morphogenesis 2 - Homo sapiens| (Human) Length = 1068 Score = 32.7 bits (73), Expect = 8.7 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Frame = -3 Query: 1552 LPP*IPVSPGLCCQGKP*DGEAPTSPSMGSNYAACY-MGVPLPLGPRPETPMP 1397 LPP P P CC P P P C MG+PLP P P + +P Sbjct: 540 LPPPPPPLPFACCPPPPPPPLPPGGPPTPPGAPPCLGMGLPLPQDPYPSSDVP 592
>P37697:CCPA_ACEXY Cellulose-complementing protein - Acetobacter xylinus| (Gluconacetobacter xylinus) Length = 353 Score = 32.7 bits (73), Expect = 8.7 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 1486 PTSPSMGSNYAACYMGVPLPLGPRPETPMPPDRMTGFSSAPQIPSSRP 1343 P +P S A P+P P P TP P R+TG ++ P SRP Sbjct: 148 PAAPDPASVPYANVAAAPVPPDPAPVTPAPQARVTGPNTRMVEPFSRP 195 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 550,408,856 Number of extensions: 13397394 Number of successful extensions: 36657 Number of sequences better than 10.0: 8 Number of HSP's gapped: 36519 Number of HSP's successfully gapped: 8 Length of query: 956 Length of database: 100,686,439 Length adjustment: 123 Effective length of query: 833 Effective length of database: 66,948,154 Effective search space: 55767812282 Effective search space used: 55767812282 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)