>P33485:VNUA_PRVKA Probable nuclear antigen - Pseudorabies virus (strain Kaplan) (PRV)|
          Length = 1733
 Score = 35.4 bits (80), Expect = 0.95
 Identities = 44/137 (32%), Positives = 51/137 (37%), Gaps = 5/137 (3%)
 Frame = -3

Query: 862  GSISCLRSRKLPTISGQSSKKCWCFLGFVGVASPGRSEGKANT-RRQRPDGWHDRGALPG 686
            G+    R R  P   G   ++    L  V  A P    G A   RR RP G    G+ P 
Sbjct: 1551 GAPGAKRPRIEPPRGGGLVEQGLAVLVMVTTAVPSGGGGAAAAGRRDRPGGGGGWGSGPP 1610

Query: 685  TAR-WRHRGAASWWSWTERERLLTAVCRRPTVIDSSHGTGGDGERRCRRAW-ARLGVVAG 512
              R   HR    WW    R R      RRP + D     GG   R CR A  A  G   G
Sbjct: 1611 PCRRCGHRCWLCWWRRGPRPR------RRPGLTDRVPPRGGPSPRGCRGAGRAGGGGRGG 1664

Query: 511  LWEGHDQGSS--PILCR 467
               G   G++  P LCR
Sbjct: 1665 CGGGRAPGAAGGPGLCR 1681

>P22807:SLOU_DROME Homeobox protein slou - Drosophila melanogaster (Fruit fly)|
          Length = 659

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +1

Query: 139 PKVAPEPTILLHLQLVSSTVTPPPKIAPEPTS*VAEHHRRLLLLPATACHPAMHDESSCT 318
           P   P P+ + HL+  SS+ T PP  A  P S            P T+  PAMH +   +
Sbjct: 228 PHPHPHPSAVFHLRAPSSSSTAPPSPATSPLS------------PPTS--PAMHSDQQMS 273

Query: 319 SPVHP 333
            P+ P
Sbjct: 274 PPIAP 278

>Q10180:MU113_SCHPO Meiotically up-regulated gene 113 protein - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 326

 Score = 32.7 bits (73), Expect = 6.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 833 FPGPETRN*PCMLYVLISKLIHPQLNLYLIEKESFVC 943
           FP P   + PC +   + +L+H +LN YL   + F C
Sbjct: 253 FPDPGKTSKPCQVSFKVERLVHKELNEYLSWMQPFTC 289

>Q6BSP4:BBP_DEBHA Branchpoint-bridging protein - Debaryomyces hansenii (Yeast)|
           (Torulaspora hansenii)
          Length = 518

 Score = 32.7 bits (73), Expect = 6.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 626 PLSFSPAPPASCSTMTPPRSSRQCSPVVPA-IRPLSPGVGLSFTTPRTSN 772
           P S +P PP S     PP SS +  P  P+ I P  P  G++   P++ N
Sbjct: 441 PSSLAPPPPPSSDIAPPPPSSDRAPPPPPSGIAPPPPPSGIAPPPPKSPN 490


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 357,895,871
Number of extensions: 7911751
Number of successful extensions: 23603
Number of sequences better than 10.0: 4
Number of HSP's gapped: 23524
Number of HSP's successfully gapped: 4
Length of query: 703
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 583
Effective length of database: 67,771,039
Effective search space: 39510515737
Effective search space used: 39510515737
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)