ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf70n14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106989:Os04g0643100 | 312 | 3e-85 | 2 | AK067501:Os04g0643100 | 312 | 3e-85 | 3 | AK100828:Os04g0539100 | 31 | 1.6 | 4 | AK110091: | 30 | 3.5 | 5 | AK102136:Os06g0703500 | 30 | 3.5 | 6 | AK073179:Os06g0703500 | 30 | 3.5 | 7 | AK061641:Os06g0703500 | 30 | 3.5 | 8 | AK064267:Os10g0159600 | 29 | 4.6 | 9 | Os05g0376400:Os05g0376400 | 29 | 6.0 | 10 | AK105482:Os02g0230200 | 29 | 6.0 |
|---|
>AK106989:Os04g0643100 | Length = 269 Score = 312 bits (799), Expect = 3e-85 Identities = 185/269 (68%), Positives = 194/269 (72%), Gaps = 65/269 (24%) Frame = +3 Query: 78 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 257 MSGQTQRLNVVPTVTMLGV+KARL+GATRGHALLKKKSDALTVQFRAILKKIVA KESMG Sbjct: 1 MSGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRAILKKIVAAKESMG 60 Query: 258 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 437 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPA Sbjct: 61 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAAG 120 Query: 438 S------SPSLTGLARGGQQVSACRAAHVKAIEVLVELASLQTSFLTLDEA--------- 572 S SPSLTGLARGGQQV+ACRAAHVKAIEVLVELASLQTSFLTLDEA Sbjct: 121 SAGPSNASPSLTGLARGGQQVAACRAAHVKAIEVLVELASLQTSFLTLDEAIKTTNRRVN 180 Query: 573 ---------------------------------------KLFAEEQLA-------EDLA- 611 K E Q+A E LA Sbjct: 181 ALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMAAAKQFAEEQLAE 240 Query: 612 ---LKRGVSMGATTNILVGGGDKDEDIIF 689 LKRG+S+GA TN+LV GG++DEDIIF Sbjct: 241 EVALKRGISVGAATNMLVAGGERDEDIIF 269
>AK067501:Os04g0643100 | Length = 269 Score = 312 bits (799), Expect = 3e-85 Identities = 185/269 (68%), Positives = 194/269 (72%), Gaps = 65/269 (24%) Frame = +3 Query: 78 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 257 MSGQTQRLNVVPTVTMLGV+KARL+GATRGHALLKKKSDALTVQFRAILKKIVA KESMG Sbjct: 1 MSGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRAILKKIVAAKESMG 60 Query: 258 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 437 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPA Sbjct: 61 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAAG 120 Query: 438 S------SPSLTGLARGGQQVSACRAAHVKAIEVLVELASLQTSFLTLDEA--------- 572 S SPSLTGLARGGQQV+ACRAAHVKAIEVLVELASLQTSFLTLDEA Sbjct: 121 SAGPSNASPSLTGLARGGQQVAACRAAHVKAIEVLVELASLQTSFLTLDEAIKTTNRRVN 180 Query: 573 ---------------------------------------KLFAEEQLA-------EDLA- 611 K E Q+A E LA Sbjct: 181 ALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMAAAKQFAEEQLAE 240 Query: 612 ---LKRGVSMGATTNILVGGGDKDEDIIF 689 LKRG+S+GA TN+LV GG++DEDIIF Sbjct: 241 EVALKRGISVGAATNMLVAGGERDEDIIF 269
>AK100828:Os04g0539100 | Length = 224 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = -3 Query: 250 DSLVATIFLRMARNCTVSASDFFLSSACPRVAPIRRAFTTPSIVTVGTTFSL 95 D+ V T+ + R + S S+ +A P + P+R +T+P +VT GT SL Sbjct: 176 DASVRTLDSKKKRKMSSSNSN----NAGPSIPPVRIFYTSPIVVTCGTVVSL 223
>AK110091: | Length = 1212 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = -3 Query: 472 PPRARPVRLGEEAPAGSTKWVNLGSLTPATFSWWERTRSEAERTDWSTTWRTPSPATYLA 293 PPR+ PV + T + + AT SW + E+ W T +T + + A Sbjct: 701 PPRSAPVAMVSSGNRHGTGQRSPSEKSAAT-SWQHSSLGESHTDSWQGTSQTTAASASSA 759 Query: 292 SASEKE 275 SAS K+ Sbjct: 760 SASSKQ 765
>AK102136:Os06g0703500 | Length = 475 Score = 29.6 bits (65), Expect = 3.5 Identities = 28/94 (29%), Positives = 45/94 (47%) Frame = +3 Query: 297 KYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSLTGLARGGQ 476 K + DG V S S ++ V SH E V G+KL K T+F + G + + A G Sbjct: 101 KNMCKDGEAGRVEDSGTSPAVAV-SHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASG-- 157 Query: 477 QVSACRAAHVKAIEVLVELASLQTSFLTLDEAKL 578 C + VK ++V + S Q+S+ ++ K+ Sbjct: 158 --VTCPSTVVKKMKVSQQ--STQSSYCQVEGCKV 187
>AK073179:Os06g0703500 | Length = 475 Score = 29.6 bits (65), Expect = 3.5 Identities = 28/94 (29%), Positives = 45/94 (47%) Frame = +3 Query: 297 KYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSLTGLARGGQ 476 K + DG V S S ++ V SH E V G+KL K T+F + G + + A G Sbjct: 101 KNMCKDGEAGRVEDSGTSPAVAV-SHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASG-- 157 Query: 477 QVSACRAAHVKAIEVLVELASLQTSFLTLDEAKL 578 C + VK ++V + S Q+S+ ++ K+ Sbjct: 158 --VTCPSTVVKKMKVSQQ--STQSSYCQVEGCKV 187
>AK061641:Os06g0703500 | Length = 455 Score = 29.6 bits (65), Expect = 3.5 Identities = 28/94 (29%), Positives = 45/94 (47%) Frame = +3 Query: 297 KYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSLTGLARGGQ 476 K + DG V S S ++ V SH E V G+KL K T+F + G + + A G Sbjct: 81 KNMCKDGEAGRVEDSGTSPAVAV-SHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASG-- 137 Query: 477 QVSACRAAHVKAIEVLVELASLQTSFLTLDEAKL 578 C + VK ++V + S Q+S+ ++ K+ Sbjct: 138 --VTCPSTVVKKMKVSQQ--STQSSYCQVEGCKV 167
>AK064267:Os10g0159600 | Length = 357 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -3 Query: 406 LGSLTPATFSWWERTRSEAERTDWSTTWRTPSPATYLASASEK 278 + S PA+ S R S A R + +WR P P + ASA+ K Sbjct: 5 VASYAPASRSPVTRASSGARRVSHTQSWRPPPPPFFPASAAVK 47
>Os05g0376400:Os05g0376400 | Length = 622 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -3 Query: 445 GEEAPAGSTKWVNLGSLTPATFSWWERTRS----EAERTDWSTTWRT 317 GEE G V LG + + WER + EAE +WS+ W++ Sbjct: 38 GEEEDEGRGWSVGLGPIDGGDEATWERGTNRRLGEAESRNWSSCWKS 84
>AK105482:Os02g0230200 | Length = 352 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = -3 Query: 220 MARNCTVSASDFF-LSSACPRVA--PIRRAFTTPSI 122 +A CT+ A+DFF S CPR A P R FT ++ Sbjct: 84 VAPGCTIRATDFFDASPGCPRCAGLPEERRFTREAL 119 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,225,457 Number of extensions: 435445 Number of successful extensions: 1642 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1639 Number of HSP's successfully gapped: 12 Length of query: 338 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 237 Effective length of database: 11,355,714 Effective search space: 2691304218 Effective search space used: 2691304218 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
