ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf70n14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060583.1| Oryza sativa (japonica cultivar-group) Os04g0643100 (Os04g0643100) mRNA, complete cds Length = 1437 Score = 515 bits (260), Expect = e-143 Identities = 332/356 (93%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 225 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 284 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 285 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 344 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 345 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 404 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 405 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 464 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 465 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 524 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 525 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 580 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 607 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 666 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 667 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 726 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 727 ctcgatgaggcca 739 Score = 117 bits (59), Expect = 8e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 728 attcaatcgcggtggacacaataagttgtggtgctggagccccagaatggcatctgttta 787 ||||||||| |||||| | ||||||||||| ||||||||| ||||||| ||| ||||||| Sbjct: 1056 attcaatcgtggtggaaataataagttgtgatgctggagctccagaatcgcacctgttta 1115 Query: 788 tagagtggcggaggttttgtttcaggc 814 ||||||||||||||||||||||||||| Sbjct: 1116 tagagtggcggaggttttgtttcaggc 1142 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 913 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 972 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 973 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 1032 Query: 690 tgatc 694 ||||| Sbjct: 1033 tgatc 1037
>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete sequence Length = 91539 Score = 515 bits (260), Expect = e-143 Identities = 332/356 (93%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 37018 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 37077 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 37078 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 37137 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 37138 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 37197 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 37198 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 37257 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 37258 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 37317 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 37318 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 37373 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 37400 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 37459 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 37460 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 37519 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 37520 ctcgatgaggcca 37532 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 738 ggtggacacaataagttgtggtgctggagccccagaatggcatctgtttatagagtggcg 797 |||||| | ||||||||||| ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 39321 ggtggaaataataagttgtgatgctggagctccagaatcgcacctgtttatagagtggcg 39380 Query: 798 gaggttttgtttcaggc 814 ||||||||||||||||| Sbjct: 39381 gaggttttgtttcaggc 39397 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 37706 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 37765 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 37766 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 37825 Query: 690 tgatc 694 ||||| Sbjct: 37826 tgatc 37830
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 515 bits (260), Expect = e-143 Identities = 332/356 (93%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 32766772 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 32766831 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 32766832 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 32766891 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 32766892 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 32766951 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 32766952 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 32767011 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32767012 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 32767071 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 32767072 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 32767127 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 32767154 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 32767213 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 32767214 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 32767273 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 32767274 ctcgatgaggcca 32767286 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 738 ggtggacacaataagttgtggtgctggagccccagaatggcatctgtttatagagtggcg 797 |||||| | ||||||||||| ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 32769077 ggtggaaataataagttgtgatgctggagctccagaatcgcacctgtttatagagtggcg 32769136 Query: 798 gaggttttgtttcaggc 814 ||||||||||||||||| Sbjct: 32769137 gaggttttgtttcaggc 32769153 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 32767460 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 32767519 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 32767520 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 32767579 Query: 690 tgatc 694 ||||| Sbjct: 32767580 tgatc 32767584 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctgccgcgccgcccacgtcaaggcca 513 ||||||||||||| |||||||||||| Sbjct: 13887480 ctgccgcgccgccaacgtcaaggcca 13887505
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 515 bits (260), Expect = e-143 Identities = 332/356 (93%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 126205 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 126264 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 126265 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 126324 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 126325 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 126384 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 126385 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 126444 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126445 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 126504 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 126505 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 126560 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 126587 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 126646 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 126647 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 126706 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 126707 ctcgatgaggcca 126719 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 738 ggtggacacaataagttgtggtgctggagccccagaatggcatctgtttatagagtggcg 797 |||||| | ||||||||||| ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 128510 ggtggaaataataagttgtgatgctggagctccagaatcgcacctgtttatagagtggcg 128569 Query: 798 gaggttttgtttcaggc 814 ||||||||||||||||| Sbjct: 128570 gaggttttgtttcaggc 128586 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 126893 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 126952 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 126953 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 127012 Query: 690 tgatc 694 ||||| Sbjct: 127013 tgatc 127017
>dbj|AK067501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H12, full insert sequence Length = 1438 Score = 515 bits (260), Expect = e-143 Identities = 332/356 (93%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 226 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 285 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 286 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 345 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 346 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 405 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 406 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 465 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 466 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 525 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 526 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 581 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 608 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 667 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 668 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 727 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 728 ctcgatgaggcca 740 Score = 117 bits (59), Expect = 8e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 728 attcaatcgcggtggacacaataagttgtggtgctggagccccagaatggcatctgttta 787 ||||||||| |||||| | ||||||||||| ||||||||| ||||||| ||| ||||||| Sbjct: 1057 attcaatcgtggtggaaataataagttgtgatgctggagctccagaatcgcacctgttta 1116 Query: 788 tagagtggcggaggttttgtttcaggc 814 ||||||||||||||||||||||||||| Sbjct: 1117 tagagtggcggaggttttgtttcaggc 1143 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 914 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 973 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 974 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 1033 Query: 690 tgatc 694 ||||| Sbjct: 1034 tgatc 1038
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 515 bits (260), Expect = e-143 Identities = 332/356 (93%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 29062 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 29121 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 29122 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 29181 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 29182 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 29241 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 29242 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 29301 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 29302 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 29361 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 29362 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 29417 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 29444 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 29503 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 29504 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 29563 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 29564 ctcgatgaggcca 29576 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 738 ggtggacacaataagttgtggtgctggagccccagaatggcatctgtttatagagtggcg 797 |||||| | ||||||||||| ||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 31367 ggtggaaataataagttgtgatgctggagctccagaatcgcacctgtttatagagtggcg 31426 Query: 798 gaggttttgtttcaggc 814 ||||||||||||||||| Sbjct: 31427 gaggttttgtttcaggc 31443 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 29750 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 29809 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 29810 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 29869 Query: 690 tgatc 694 ||||| Sbjct: 29870 tgatc 29874
>dbj|AK106989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A07, full insert sequence Length = 1144 Score = 507 bits (256), Expect = e-140 Identities = 331/356 (92%) Strand = Plus / Plus Query: 77 gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 136 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 61 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 120 Query: 137 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 196 |||||| || || |||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 121 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 180 Query: 197 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 256 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 181 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 240 Query: 257 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 316 ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 241 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 300 Query: 317 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 376 ||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 301 cgtccgccacgttgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 360 Query: 377 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 361 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 416 Score = 192 bits (97), Expect = 2e-45 Identities = 124/133 (93%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 443 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 502 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 503 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 562 Query: 561 ctcgacgaggcca 573 ||||| ||||||| Sbjct: 563 ctcgatgaggcca 575 Score = 58.0 bits (29), Expect = 6e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 ||||||| ||||| ||||| ||||| || ||||| | |||||||||||||| |||| Sbjct: 749 gccaagcaattcgcagaggaacagcttgcggaggaggttgccctcaagaggggtatctct 808 Query: 630 atgggggccacgaccaacatactggttggcggcggcgacaaggacgaagacatcatcttc 689 |||| || | |||||||| |||||| ||| || || | ||||||||||||||||||| Sbjct: 809 gtgggtgctgccaccaacatgttggttgccggtggagagagggacgaagacatcatcttc 868 Query: 690 tgatc 694 ||||| Sbjct: 869 tgatc 873
>gb|AY104098.1| Zea mays PCO119647 mRNA sequence Length = 1235 Score = 387 bits (195), Expect = e-104 Identities = 297/331 (89%) Strand = Plus / Plus Query: 102 aacgtggtgccgacggtgacgatgctcggggtggtgaaggcgcgcctgatcggcgccacg 161 ||||| ||||||||||||||||||||||| || ||||||| || || ||||||| || Sbjct: 120 aacgtcgtgccgacggtgacgatgctcggcgtcatgaaggctcggctcgtcggcgcgacc 179 Query: 162 cgggggcacgcgctgctcaagaagaagtcggacgcgctcaccgtgcagttccgcgccatc 221 || || ||||||||||| ||||||||||| |||||||| || || ||||||||||||||| Sbjct: 180 cgcggccacgcgctgctgaagaagaagtccgacgcgctgacggtccagttccgcgccatc 239 Query: 222 ctcaagaagatcgtcgccaccaaggagtccatgggcgaggccatgcgcgcctcctccttc 281 |||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||| Sbjct: 240 ctcaagaagatcgtcgccgccaaggagtcgatgggcgagacgatgcgcgcctcctccttc 299 Query: 282 tcgctcgccgaggccaagtacgtggccggcgacggcgtgcgccacgtcgtgctccagtcc 341 || |||||||||||||||||||| || ||||||||||| ||||||||| | ||||||||| Sbjct: 300 tccctcgccgaggccaagtacgtcgctggcgacggcgtccgccacgtcatcctccagtcc 359 Query: 342 gtccgctccgcctcgctccgcgtccgctcccaccaggagaacgtcgccggggtcaagctg 401 |||||| | || || |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 360 gtccgcgcggcatccgtccgcgtccgctcccaccaggagaacgtggccggggtcaagctc 419 Query: 402 cccaagttcacccacttcgtcgaccccgccg 432 ||||||||||||||||||||||||||||||| Sbjct: 420 cccaagttcacccacttcgtcgaccccgccg 450 Score = 161 bits (81), Expect = 6e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 441 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 500 ||||| |||||||| ||||| || |||||||| ||||||||| ||||||||||| |||| Sbjct: 477 tccccgagcctcacgggcctggcccgcggcgggcagcaggtcgccgcctgccgctccgcg 536 Query: 501 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 560 ||||||||||||||||||||||||||||||||||| || || || |||||||||||||| Sbjct: 537 cacgtcaaggccatcgaggtgctcgtcgagctcgcatctctgcaaacctccttcctcact 596 Query: 561 ctcgacgaggcca 573 ||||||||||||| Sbjct: 597 ctcgacgaggcca 609 Score = 63.9 bits (32), Expect = 1e-06 Identities = 89/108 (82%) Strand = Plus / Plus Query: 585 gaggagcagctcgccgaggatctcgccctcaagaggggcgtctccatgggggccacgacc 644 ||||| ||||| |||||||||||||| || |||||||| ||||| ||||||| || | Sbjct: 798 gaggaacagcttgccgaggatctcgcgcttaagaggggtatctccgtgggggctgcggca 857 Query: 645 aacatactggttggcggcggcgacaaggacgaagacatcatcttctga 692 ||| | ||||||| || || || |||||||| ||||||||||||||| Sbjct: 858 aacctgctggttgctggtggggagaaggacgacgacatcatcttctga 905 Score = 44.1 bits (22), Expect = 0.97 Identities = 46/54 (85%) Strand = Plus / Plus Query: 759 tgctggagccccagaatggcatctgtttatagagtggcggaggttttgtttcag 812 ||||||||| ||||||| | ||||||||||||| || |||| ||||| ||||| Sbjct: 960 tgctggagctccagaattgtatctgtttatagaatgatggagattttgattcag 1013
>gb|AY105877.1| Zea mays PCO119646 mRNA sequence Length = 964 Score = 188 bits (95), Expect = 3e-44 Identities = 119/127 (93%) Strand = Plus / Plus Query: 447 agcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcccacgtc 506 ||||| || |||||||| |||||||| ||||||||| |||||||||||||||| |||||| Sbjct: 90 agccttacgggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcgcacgtc 149 Query: 507 aaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcaccctcgac 566 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 150 aaggccatcgaggtgctcgtcgagctcgcctcgctccagacctccttcctcacgctcgac 209 Query: 567 gaggcca 573 ||||||| Sbjct: 210 gaggcca 216 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 570 gccaagctcttcgccgaggagcagctcgccgaggatctcgccctcaagaggggcgtctcc 629 |||| ||| ||||| ||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 390 gccaggcttttcgcagaggaacagctcgccgaggatctcgcgctcaagaggggcatctcc 449 Query: 630 atgggggc 637 ||||||| Sbjct: 450 gtgggggc 457 Score = 67.9 bits (34), Expect = 7e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 387 gccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 432 |||||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 12 gccggggtcaagctcccgaagttcactcacttcgtcgaccccgccg 57
>emb|CT836530.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108A16, full insert sequence Length = 1247 Score = 163 bits (82), Expect = 2e-36 Identities = 181/214 (84%) Strand = Plus / Minus Query: 82 cggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggtgaagg 141 |||||||| |||| | |||| |||||||||||||||||||| ||| || ||||||||| Sbjct: 752 cggggcaggggcagcggctgagcgtggtgccgacggtgacgacgctgggcatggtgaagg 693 Query: 142 cgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgcgctca 201 |||| ||| || |||||| || || ||||||||||||||||||||||||||||| |||| Sbjct: 692 cgcggctggccgccgccacccgcggccacgcgctgctcaagaagaagtcggacgcactca 633 Query: 202 ccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatgggcgagg 261 ||| |||||||||||| |||| ||||||||| ||||||||||||||||||| | Sbjct: 632 ccgccaagttccgcgccaccctccgccgcatcgtcgccgccaaggagtccatgggcgacg 573 Query: 262 ccatgcgcgcctcctccttctcgctcgccgaggc 295 ||||||||||| |||| |||| ||||||||||| Sbjct: 572 ccatgcgcgccgcctcgctctccctcgccgaggc 539 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Minus Query: 357 ctccgcgtccgctcccaccaggagaacgtcgccgg 391 |||||||||||| |||||||||| ||| ||||||| Sbjct: 477 ctccgcgtccgcgcccaccaggacaacatcgccgg 443
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 48.1 bits (24), Expect = 0.062 Identities = 24/24 (100%) Strand = Plus / Minus Query: 455 cggcctcgcgcgcggcggccagca 478 |||||||||||||||||||||||| Sbjct: 2457603 cggcctcgcgcgcggcggccagca 2457580
>gb|AC093578.3| Homo sapiens chromosome 1 clone RP11-76N22, complete sequence Length = 164453 Score = 48.1 bits (24), Expect = 0.062 Identities = 24/24 (100%) Strand = Plus / Plus Query: 841 ccaagacacaaaataatctctctt 864 |||||||||||||||||||||||| Sbjct: 148884 ccaagacacaaaataatctctctt 148907
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 48.1 bits (24), Expect = 0.062 Identities = 27/28 (96%) Strand = Plus / Plus Query: 454 ccggcctcgcgcgcggcggccagcaggt 481 ||||||||| |||||||||||||||||| Sbjct: 1142623 ccggcctcgtgcgcggcggccagcaggt 1142650
>ref|XM_001178657.1| PREDICTED: Strongylocentrotus purpuratus similar to vacuolar proton pump delta polypeptide (LOC581267), mRNA Length = 867 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 528 gagctcgcctccctccagacctccttc 554 ||||| ||||||||||||||||||||| Sbjct: 505 gagcttgcctccctccagacctccttc 531
>ref|XM_781278.2| PREDICTED: Strongylocentrotus purpuratus similar to vacuolar proton pump delta polypeptide (LOC581267), mRNA Length = 867 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 528 gagctcgcctccctccagacctccttc 554 ||||| ||||||||||||||||||||| Sbjct: 505 gagcttgcctccctccagacctccttc 531
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 455 cggcctcgcgcgcggcggccagc 477 ||||||||||||||||||||||| Sbjct: 1348074 cggcctcgcgcgcggcggccagc 1348052
>ref|NM_066693.2| Caenorhabditis elegans Vacuolar H ATPase family member (vha-14) (vha-14) mRNA, complete cds Length = 1152 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 506 caaggccatcgaggtgctcgtcgagctcgcc 536 |||||||||||| ||||||||||||||||| Sbjct: 435 caaggccatcgaattgctcgtcgagctcgcc 465
>emb|Z27080.1|CEF55H2 Caenorhabditis elegans Cosmid F55H2, complete sequence Length = 22950 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 506 caaggccatcgaggtgctcgtcgagctcgcc 536 |||||||||||| ||||||||||||||||| Sbjct: 11666 caaggccatcgaattgctcgtcgagctcgcc 11696
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 539 cctccagacctccttcctcaccc 561 ||||||||||||||||||||||| Sbjct: 191408 cctccagacctccttcctcaccc 191430
>ref|XM_950860.1| Neurospora crassa OR74A hypothetical protein (NCU06411.1) partial mRNA Length = 3306 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 657 ggcggcggcgacaaggacgaaga 679 ||||||||||||||||||||||| Sbjct: 3142 ggcggcggcgacaaggacgaaga 3164
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 539 cctccagacctccttcctcaccc 561 ||||||||||||||||||||||| Sbjct: 1698388 cctccagacctccttcctcaccc 1698366
>emb|CR855046.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0125J07, complete sequence Length = 73885 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctgccgcgccgcccacgtcaaggcca 513 ||||||||||||| |||||||||||| Sbjct: 43622 ctgccgcgccgccaacgtcaaggcca 43647
>ref|NM_001067990.1| Oryza sativa (japonica cultivar-group) Os08g0288400 (Os08g0288400) mRNA, complete cds Length = 2203 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Minus Query: 580 tcgccgaggagcagctcgccgaggatctcg 609 ||||||||||| |||||||||||| ||||| Sbjct: 307 tcgccgaggaggagctcgccgaggctctcg 278
>ref|NM_001065395.1| Oryza sativa (japonica cultivar-group) Os07g0139500 (Os07g0139500) mRNA, complete cds Length = 3629 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 gcaggtctccgcctgccgcgccgccc 501 ||||||||||||||||| |||||||| Sbjct: 294 gcaggtctccgcctgcctcgccgccc 319
>ref|NM_001065098.1| Oryza sativa (japonica cultivar-group) Os06g0713000 (Os06g0713000) mRNA, complete cds Length = 1380 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 511 ccatcgaggtgctcgtcgagctcgcc 536 ||||||||||| |||||||||||||| Sbjct: 1163 ccatcgaggtgttcgtcgagctcgcc 1138
>ref|NM_001058956.1| Oryza sativa (japonica cultivar-group) Os04g0307200 (Os04g0307200) mRNA, complete cds Length = 2398 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctgccgcgccgcccacgtcaaggcca 513 ||||||||||||| |||||||||||| Sbjct: 272 ctgccgcgccgccaacgtcaaggcca 297
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 cgacgaggccaagctcttcgccgagg 588 |||||||||||||| ||||||||||| Sbjct: 2215070 cgacgaggccaagcgcttcgccgagg 2215095
>emb|CR792424.26| Zebrafish DNA sequence from clone DKEY-38C18 in linkage group 18, complete sequence Length = 190867 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 963 agttacatatatatttattcagacattgtg 992 ||||| |||||||||||||||| ||||||| Sbjct: 147195 agttagatatatatttattcagtcattgtg 147224
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence Length = 274518 Score = 44.1 bits (22), Expect = 0.97 Identities = 22/22 (100%) Strand = Plus / Plus Query: 930 gtactgtatttcatttccctgc 951 |||||||||||||||||||||| Sbjct: 76542 gtactgtatttcatttccctgc 76563
>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence Length = 187246 Score = 44.1 bits (22), Expect = 0.97 Identities = 22/22 (100%) Strand = Plus / Plus Query: 930 gtactgtatttcatttccctgc 951 |||||||||||||||||||||| Sbjct: 85847 gtactgtatttcatttccctgc 85868
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 cgacgaggccaagctcttcgccgagg 588 |||||||||||||| ||||||||||| Sbjct: 1548228 cgacgaggccaagcgcttcgccgagg 1548253
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Minus Query: 580 tcgccgaggagcagctcgccgaggatctcg 609 ||||||||||| |||||||||||| ||||| Sbjct: 11453442 tcgccgaggaggagctcgccgaggctctcg 11453413
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 gcaggtctccgcctgccgcgccgccc 501 ||||||||||||||||| |||||||| Sbjct: 2123509 gcaggtctccgcctgcctcgccgccc 2123484
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 659 cggcggcgacaaggacgaagacatcatctt 688 ||||| |||||||||||| ||||||||||| Sbjct: 7244317 cggcgacgacaaggacgatgacatcatctt 7244346 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 511 ccatcgaggtgctcgtcgagctcgcc 536 ||||||||||| |||||||||||||| Sbjct: 29681451 ccatcgaggtgttcgtcgagctcgcc 29681426
>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16 Length = 123385 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 gcgcggcggccagcaggtctccgcct 489 ||||||||||||||||||| |||||| Sbjct: 7611 gcgcggcggccagcaggtcgccgcct 7586
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 gcgcggcggccagcaggtctccgcct 489 ||||||||||||||||||| |||||| Sbjct: 143439 gcgcggcggccagcaggtcgccgcct 143414
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 gcgcggcggccagcaggtctccgcct 489 ||||||||||||||||||| |||||| Sbjct: 169226 gcgcggcggccagcaggtcgccgcct 169201
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctgccgcgccgcccacgtcaaggcca 513 ||||||||||||| |||||||||||| Sbjct: 101143 ctgccgcgccgccaacgtcaaggcca 101168
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctgccgcgccgcccacgtcaaggcca 513 ||||||||||||| |||||||||||| Sbjct: 1360 ctgccgcgccgccaacgtcaaggcca 1385
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Minus Query: 580 tcgccgaggagcagctcgccgaggatctcg 609 ||||||||||| |||||||||||| ||||| Sbjct: 7576 tcgccgaggaggagctcgccgaggctctcg 7547
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 511 ccatcgaggtgctcgtcgagctcgcc 536 ||||||||||| |||||||||||||| Sbjct: 54565 ccatcgaggtgttcgtcgagctcgcc 54540
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 511 ccatcgaggtgctcgtcgagctcgcc 536 ||||||||||| |||||||||||||| Sbjct: 125036 ccatcgaggtgttcgtcgagctcgcc 125011
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 454 ccggcctcgcgcgcggcggccagcag 479 ||||||||| |||||||||||||||| Sbjct: 2546274 ccggcctcgtgcgcggcggccagcag 2546249
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 659 cggcggcgacaaggacgaagacatcatctt 688 ||||| |||||||||||| ||||||||||| Sbjct: 121728 cggcgacgacaaggacgatgacatcatctt 121757
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 659 cggcggcgacaaggacgaagacatcatctt 688 ||||| |||||||||||| ||||||||||| Sbjct: 79321 cggcgacgacaaggacgatgacatcatctt 79350
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Minus Query: 580 tcgccgaggagcagctcgccgaggatctcg 609 ||||||||||| |||||||||||| ||||| Sbjct: 67431 tcgccgaggaggagctcgccgaggctctcg 67402
>dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D08, full insert sequence Length = 1380 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 511 ccatcgaggtgctcgtcgagctcgcc 536 ||||||||||| |||||||||||||| Sbjct: 1163 ccatcgaggtgttcgtcgagctcgcc 1138
>dbj|AK102738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106D23, full insert sequence Length = 2358 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Minus Query: 580 tcgccgaggagcagctcgccgaggatctcg 609 ||||||||||| |||||||||||| ||||| Sbjct: 329 tcgccgaggaggagctcgccgaggctctcg 300
>dbj|AK101928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072C14, full insert sequence Length = 2203 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Minus Query: 580 tcgccgaggagcagctcgccgaggatctcg 609 ||||||||||| |||||||||||| ||||| Sbjct: 307 tcgccgaggaggagctcgccgaggctctcg 278
>dbj|AK070019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039B14, full insert sequence Length = 2399 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctgccgcgccgcccacgtcaaggcca 513 ||||||||||||| |||||||||||| Sbjct: 273 ctgccgcgccgccaacgtcaaggcca 298
>dbj|AK065452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M19, full insert sequence Length = 3635 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 gcaggtctccgcctgccgcgccgccc 501 ||||||||||||||||| |||||||| Sbjct: 298 gcaggtctccgcctgcctcgccgccc 323
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 gcaggtctccgcctgccgcgccgccc 501 ||||||||||||||||| |||||||| Sbjct: 79302 gcaggtctccgcctgcctcgccgccc 79277
>emb|BX255949.3| Zebrafish DNA sequence from clone DKEY-76F5 in linkage group 2, complete sequence Length = 214484 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 965 ttacatatatatttattcagacattg 990 |||||||||||||| ||||||||||| Sbjct: 13092 ttacatatatattttttcagacattg 13117
>dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1479 Length = 1223 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Minus Query: 511 ccatcgaggtgctcgtcgagctcgcc 536 ||||||||||| |||||||||||||| Sbjct: 1006 ccatcgaggtgttcgtcgagctcgcc 981
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 ctcgcgcgcggcggccagcag 479 ||||||||||||||||||||| Sbjct: 3974859 ctcgcgcgcggcggccagcag 3974879
>ref|XM_001229068.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_02553) mRNA, complete cds Length = 2265 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 ctcctccttctcgctcgccga 292 ||||||||||||||||||||| Sbjct: 1542 ctcctccttctcgctcgccga 1522
>ref|NM_001049969.1| Oryza sativa (japonica cultivar-group) Os01g0588400 (Os01g0588400) mRNA, complete cds Length = 1175 Score = 42.1 bits (21), Expect = 3.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 288 gccgaggccaagtacgtggccggcgacggcgtg 320 ||||||||||||||| | ||||||| ||||||| Sbjct: 755 gccgaggccaagtacctcgccggcgtcggcgtg 787
>ref|XM_001155543.1| PREDICTED: Pan troglodytes similar to cilia-associated protein (LOC744582), mRNA Length = 3051 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 ccgccggcgcctcctccccca 447 ||||||||||||||||||||| Sbjct: 899 ccgccggcgcctcctccccca 919
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 cggcctcgcgcgcggcggcca 475 ||||||||||||||||||||| Sbjct: 2408509 cggcctcgcgcgcggcggcca 2408489
>gb|AC145590.3| Mus musculus BAC clone RP24-175D4 from chromosome 19, complete sequence Length = 179063 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 851 aaataatctctcttctgtact 871 ||||||||||||||||||||| Sbjct: 84382 aaataatctctcttctgtact 84362
>gb|AC133904.9| Mus musculus chromosome 19, clone RP24-143J12, complete sequence Length = 163882 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 851 aaataatctctcttctgtact 871 ||||||||||||||||||||| Sbjct: 144829 aaataatctctcttctgtact 144849
>gb|AC073344.7| Homo sapiens BAC clone RP11-628B17 from 4, complete sequence Length = 192573 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 cagacctccttcctcaccctc 563 ||||||||||||||||||||| Sbjct: 54699 cagacctccttcctcaccctc 54719
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 3.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 288 gccgaggccaagtacgtggccggcgacggcgtg 320 ||||||||||||||| | ||||||| ||||||| Sbjct: 22911133 gccgaggccaagtacctcgccggcgtcggcgtg 22911101
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 42.1 bits (21), Expect = 3.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 288 gccgaggccaagtacgtggccggcgacggcgtg 320 ||||||||||||||| | ||||||| ||||||| Sbjct: 114690 gccgaggccaagtacctcgccggcgtcggcgtg 114658
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 512 catcgaggtgctcgtcgagctcgcc 536 |||||| |||||||||||||||||| Sbjct: 681830 catcgacgtgctcgtcgagctcgcc 681806
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 tcgcgcgcggcggccagcagg 480 ||||||||||||||||||||| Sbjct: 80992 tcgcgcgcggcggccagcagg 81012
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 tcgcgcgcggcggccagcagg 480 ||||||||||||||||||||| Sbjct: 199141 tcgcgcgcggcggccagcagg 199121
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 455 cggcctcgcgcgcggcggccagcag 479 ||||||||||||| ||||||||||| Sbjct: 226582 cggcctcgcgcgccgcggccagcag 226558
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cccaccaggagaacgtcgccg 390 ||||||||||||||||||||| Sbjct: 6388 cccaccaggagaacgtcgccg 6408
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 ccacttcgtcgaccccgccgg 433 ||||||||||||||||||||| Sbjct: 234269 ccacttcgtcgaccccgccgg 234289
>gb|AC093592.3| Homo sapiens BAC clone RP11-50L21 from 4, complete sequence Length = 184533 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 cagacctccttcctcaccctc 563 ||||||||||||||||||||| Sbjct: 94175 cagacctccttcctcaccctc 94195
>gb|AF178441.1|AF178441 Sinorhizobium meliloti nutrient deprivation-responsive gene cluster, partial sequence Length = 4762 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 ccacttcgtcgaccccgccgg 433 ||||||||||||||||||||| Sbjct: 3217 ccacttcgtcgaccccgccgg 3237
>dbj|AK107346.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G10, full insert sequence Length = 1175 Score = 42.1 bits (21), Expect = 3.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 288 gccgaggccaagtacgtggccggcgacggcgtg 320 ||||||||||||||| | ||||||| ||||||| Sbjct: 755 gccgaggccaagtacctcgccggcgtcggcgtg 787
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 ctcgcgcgcggcggccagcag 479 ||||||||||||||||||||| Sbjct: 3374992 ctcgcgcgcggcggccagcag 3375012
>emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, complete sequence Length = 156592 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 atatatatttattcagacatt 989 ||||||||||||||||||||| Sbjct: 33287 atatatatttattcagacatt 33307 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 166,726,708 Number of extensions: 9845456 Number of successful extensions: 237044 Number of sequences better than 10.0: 75 Number of HSP's gapped: 237036 Number of HSP's successfully gapped: 104 Length of query: 1014 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 991 Effective length of database: 18,503,978,556 Effective search space: 18337442748996 Effective search space used: 18337442748996 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
