ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf70i01 |
|---|---|
| Clone Library Name | barley_pub |
>Q64HA9:SPL11_ORYSA Spotted leaf protein 11 - Oryza sativa (Rice)| Length = 694 Score = 84.7 bits (208), Expect = 1e-15 Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 14/292 (4%) Frame = +1 Query: 169 VEVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPT 348 + +P F CPIS+E+M+DPV +S+G TY+R IE+W+ GH CP T+Q++ + T Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWI-ASGHHTCPTTQQKMSTS--ALT 327 Query: 349 PNHTLRRLIQGWCAVHAVE--------RFPTP------RAPIDAARVETIVDAARRGHDL 486 PN+ LR LI WC + +E PTP RA IDA + + Sbjct: 328 PNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDAL-LSKLCSPDTEEQRS 386 Query: 487 LVASLRELADIVAESDCNRRCVESTPGAVAFLVSVIKKHAADDTPKPLESQEDQMFGAVV 666 A LR ++A+ + N R + GA+ L+S++ + L +QE Sbjct: 387 AAAELR----LLAKRNANNRICIAEAGAIPLLLSLL-------SSSDLRTQEH------- 428 Query: 667 DSPKATSPEDVALSILYSLRLSEGSWKRVLERGDNFLDTMASVLRRPSYLSRTHGIQLLK 846 A++ L +L + E + ++ G + ++ VL+ S +R + L Sbjct: 429 -----------AVTALLNLSIHEDNKASIISSG--AVPSIVHVLKNGSMEARENAAATL- 474 Query: 847 AAVSEMPPAQLTSASAELVEGVVSVVTDKLSGKAVKIALQVLCRLCLWGRNR 1002 ++S + ++T + +V V+ + S + K A L LC++ N+ Sbjct: 475 FSLSVIDEYKVTIGGMGAIPALV-VLLGEGSQRGKKDAAAALFNLCIYQGNK 525
>Q8VZ40:PUB14_ARATH E3 ubiquitin ligase PUB14 - Arabidopsis thaliana (Mouse-ear cress)| Length = 632 Score = 82.8 bits (203), Expect = 4e-15 Identities = 94/413 (22%), Positives = 181/413 (43%), Gaps = 12/413 (2%) Frame = +1 Query: 175 VPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPN 354 +P YF CPIS+E+M+DPV +S+G TY+R SI++W+ GH CP +++ L A TPN Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLHAGL--TPN 304 Query: 355 HTLRRLIQGWCAVHAVERFPTPRAPIDAARV--ETIVDAARRGHDLLVASLRELADIVAE 528 + L+ LI WC + +E P + ++ + D R +++ L +LA+ E Sbjct: 305 YVLKSLIALWCESNGIE-LPQNQGSCRTTKIGGSSSSDCDR---TFVLSLLEKLANGTTE 360 Query: 529 SDCNRRCVESTPGAVAFLVSVIKKHAADDTPKPLESQEDQMFGAVVDSPKATSPEDVALS 708 A A + ++ K D+ E+ + ++ SP + E +++ Sbjct: 361 QQ----------RAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEH-SVT 409 Query: 709 ILYSLRLSEGSWKRVLERGDNFLDTMASVLRRPSYLSRTHGIQLLKAAVSEMPPAQLTSA 888 L +L ++EG+ +++ G + + VL+ S +R + L ++S + ++ Sbjct: 410 ALLNLSINEGNKGAIVDAG--AITDIVEVLKNGSMEARENAAATL-FSLSVIDENKVAIG 466 Query: 889 SAELVEGVVSVVTDKLSGKAVKIALQVLCRLCLWGRNRXXXXXXXXXXXXXXXXXDECCG 1068 +A ++ ++S++ ++ + + K A + LC++ N+ D G Sbjct: 467 AAGAIQALISLL-EEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKD--AG 523 Query: 1069 GSKRASQLAIVVMDHLCGCAEGRLELVAHKAGLAVMARAVTRVSAAGTESAVRALHAVAR 1248 G LAI+ + L EG+ +A + V+ + S E+A Sbjct: 524 GGMVDEALAILAI--LSTNQEGK-TAIAEAESIPVLVEIIRTGSPRNRENA--------- 571 Query: 1249 HSATPAVLQEMLAVGVVERLLFLVQAGA----------AGDRPRERAREMLKM 1377 A + L +G +ERL + GA DR + +A +L++ Sbjct: 572 -----AAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLEL 619
>Q5FVN8:WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 - Rattus| norvegicus (Rat) Length = 476 Score = 59.3 bits (142), Expect = 4e-08 Identities = 33/83 (39%), Positives = 44/83 (53%) Frame = +1 Query: 148 MEGLPSQVEVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLG 327 ME L S + P F+CPI+ E+M+DPV S G +Y+RE++E W+ PMT L Sbjct: 397 MESLSSGI--PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR-TSPMT--NLA 451 Query: 328 AADREPTPNHTLRRLIQGWCAVH 396 TPN TL+ I W H Sbjct: 452 LPSLVLTPNRTLKMAINRWLETH 474
>Q8N9V3:WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 - Homo sapiens| (Human) Length = 476 Score = 58.9 bits (141), Expect = 6e-08 Identities = 29/74 (39%), Positives = 43/74 (58%) Frame = +1 Query: 175 VPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPN 354 +P F+CPI+ E+M+DPV S G +Y++E++E W+ + PMT L +A TPN Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWI-SKKKRTSPMTNLVLPSA--VLTPN 460 Query: 355 HTLRRLIQGWCAVH 396 TL+ I W H Sbjct: 461 RTLKMAINRWLETH 474
>Q9D0I6:WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 - Mus musculus| (Mouse) Length = 474 Score = 58.5 bits (140), Expect = 8e-08 Identities = 29/74 (39%), Positives = 40/74 (54%) Frame = +1 Query: 175 VPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPN 354 +P F+CPI+ E+M+DPV S G +Y+RE++E W+ PMT L TPN Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR-TSPMT--NLALPSLVLTPN 458 Query: 355 HTLRRLIQGWCAVH 396 TL+ I W H Sbjct: 459 RTLKMAINRWLETH 472
>A0AUS0:WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 487 Score = 58.5 bits (140), Expect = 8e-08 Identities = 33/81 (40%), Positives = 44/81 (54%) Frame = +1 Query: 142 EVMEGLPSQVEVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQ 321 E ++ +P P FLCPI+ EIM+DPV + G +Y+RE+IE W+ T PMT Sbjct: 406 EELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNR-TSPMTNLP 464 Query: 322 LGAADREPTPNHTLRRLIQGW 384 L TPN TL+ I W Sbjct: 465 LQTT--LLTPNRTLKMAIFRW 483
>Q5ZMC3:WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 - Gallus| gallus (Chicken) Length = 476 Score = 58.5 bits (140), Expect = 8e-08 Identities = 29/72 (40%), Positives = 43/72 (59%) Frame = +1 Query: 169 VEVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPT 348 V VP FLCPI+ E+M+DPV + G +Y++E++E W+ ++ PMT L + T Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWI-SNNRRSSPMTNLPLPSL--VLT 458 Query: 349 PNHTLRRLIQGW 384 PN TL+ I W Sbjct: 459 PNRTLKMAISRW 470
>Q9WUD1:STUB1_MOUSE STIP1 homology and U box-containing protein 1 - Mus musculus| (Mouse) Length = 304 Score = 47.0 bits (110), Expect = 2e-04 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 7/110 (6%) Frame = +1 Query: 76 ACVHS*IDKYIYRVRTRCGYDQEVMEGLPSQVE-------VPSYFLCPISMEIMRDPVTL 234 AC+ + DKY+ M+ L SQV+ +P Y IS E+MR+P Sbjct: 199 ACIEAKHDKYMAD-----------MDELFSQVDEKRKKRDIPDYLCGKISFELMREPCIT 247 Query: 235 SSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRRLIQGW 384 SGITYDR+ IE + GH + P+T+ L + PN ++ +I + Sbjct: 248 PSGITYDRKDIEEHLQRVGHFD-PVTRSPL--TQEQLIPNLAMKEVIDAF 294
>Q9UNE7:STUB1_HUMAN STIP1 homology and U box-containing protein 1 - Homo sapiens| (Human) Length = 303 Score = 47.0 bits (110), Expect = 2e-04 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 7/110 (6%) Frame = +1 Query: 76 ACVHS*IDKYIYRVRTRCGYDQEVMEGLPSQVE-------VPSYFLCPISMEIMRDPVTL 234 AC+ + DKY+ M+ L SQV+ +P Y IS E+MR+P Sbjct: 198 ACIEAKHDKYMAD-----------MDELFSQVDEKRKKRDIPDYLCGKISFELMREPCIT 246 Query: 235 SSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRRLIQGW 384 SGITYDR+ IE + GH + P+T+ L + PN ++ +I + Sbjct: 247 PSGITYDRKDIEEHLQRVGHFD-PVTRSPL--TQEQLIPNLAMKEVIDAF 293
>Q5ZHY5:STUB1_CHICK STIP1 homology and U box-containing protein 1 - Gallus gallus| (Chicken) Length = 314 Score = 45.1 bits (105), Expect = 9e-04 Identities = 25/71 (35%), Positives = 39/71 (54%) Frame = +1 Query: 172 EVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTP 351 ++P Y IS E+MR+P SGITYDR+ IE + GH + P+T+ L + P Sbjct: 237 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPL--TQDQLIP 293 Query: 352 NHTLRRLIQGW 384 N ++ +I + Sbjct: 294 NLAMKEVIDAF 304
>Q9HE05:UFD2_SCHPO Ubiquitin conjugation factor E4 - Schizosaccharomyces pombe (Fission| yeast) Length = 1010 Score = 43.5 bits (101), Expect = 0.003 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = +1 Query: 172 EVPSYFLCPISMEIMRDPVTL-SSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPT 348 ++P YFL P+ IM+DPV L SGI+ DR +I+ + +D P + L D T Sbjct: 930 DIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKAHLLSDATD--PFNRTPLTLDD--VT 985 Query: 349 PNHTLRRLI 375 PN TLR I Sbjct: 986 PNDTLREEI 994
>P35227:PCGF2_HUMAN Polycomb group RING finger protein 2 - Homo sapiens (Human)| Length = 344 Score = 37.7 bits (86), Expect = 0.14 Identities = 24/68 (35%), Positives = 38/68 (55%) Frame = -1 Query: 1328 PACTRNSSLSTTPTASISCNTAGVAECLATACRARTALSVPAADTRVTALAITARPALCA 1149 PAC R +L+T PT S NT+G +EC + + +A + ++PA ++L A P+ + Sbjct: 231 PACKR-LTLATVPTPSEGTNTSGASECESVSDKAPSPATLPATS---SSLPSPATPSHGS 286 Query: 1148 TSSRRPSA 1125 SS P A Sbjct: 287 PSSHGPPA 294
>Q09349:UBE4_CAEEL Probable ubiquitin conjugation factor E4 - Caenorhabditis elegans| Length = 980 Score = 37.0 bits (84), Expect = 0.24 Identities = 26/71 (36%), Positives = 35/71 (49%) Frame = +1 Query: 172 EVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTP 351 +VP F PI IM DPV L SG DR IER + + + P + L + E +P Sbjct: 905 DVPEEFKDPIMDAIMVDPVKLPSGHVMDRAVIERHLLSTPNN--PFNRAPL--SHNELSP 960 Query: 352 NHTLRRLIQGW 384 + L+ IQ W Sbjct: 961 DSELKAKIQEW 971
>P23798:PCGF2_MOUSE Polycomb group RING finger protein 2 - Mus musculus (Mouse)| Length = 342 Score = 37.0 bits (84), Expect = 0.24 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -1 Query: 1328 PACTRNSSLSTTPTASISCNTAGVAECLATACRARTALSVPAADTRVTALAITARPALCA 1149 PAC R +L T PT S NT+G +EC + + +A + ++PA ++L A P+ + Sbjct: 231 PACKR-LTLPTVPTPSEGTNTSGASECESVSDKAPSPATLPATS---SSLPSPATPSHGS 286 Query: 1148 TSSRRPSA 1125 SS P A Sbjct: 287 PSSHGPPA 294
>P54860:UFD2_YEAST Ubiquitin conjugation factor E4 - Saccharomyces cerevisiae (Baker's| yeast) Length = 961 Score = 35.4 bits (80), Expect = 0.69 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +1 Query: 172 EVPSYFLCPISMEIMRDPVTL-SSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPT 348 +VP FL P+ IM+DPV L +S + DR +I+ + +D P + L D T Sbjct: 880 DVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTD--PFNRMPLKLED--VT 935 Query: 349 PNHTLRRLI 375 PN LR+ I Sbjct: 936 PNEELRQKI 944
>Q8C006:TRI35_MOUSE Tripartite motif-containing protein 35 - Mus musculus (Mouse)| Length = 501 Score = 32.0 bits (71), Expect(2) = 1.1 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +1 Query: 190 LCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRR 369 LC + + RD VTL G + R + CP+ K++ A E NHTL Sbjct: 20 LCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKER--AVPGELRTNHTLNN 77 Query: 370 LIQ 378 L++ Sbjct: 78 LVE 80 Score = 21.6 bits (44), Expect(2) = 1.1 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 2/17 (11%) Frame = +3 Query: 390 GAR--GREVPHPARSHR 434 GAR GR P P R+HR Sbjct: 89 GARWTGRRSPRPCRAHR 105
>Q8TFG9:YL61_SCHPO Uncharacterized serine/threonine-rich protein PB15E9.01c precursor| - Schizosaccharomyces pombe (Fission yeast) Length = 943 Score = 34.3 bits (77), Expect = 1.5 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 2/188 (1%) Frame = -1 Query: 809 LGRLSTDAMVSKKLSPRSKTLFQLPSESLSEYRMLRATSSGEVAFGESTTAPNI*SSWDS 630 L ST++ S + S T S SL+ +T+S +A T++ SS S Sbjct: 91 LASSSTNSTTSASPTSSSLTSSSATSSSLAS----SSTTSSSLASSSITSSSLASSSITS 146 Query: 629 KGLGVSSA-ACFLMTDTRNATAPGVLSTQRRLQSLSATMSASSLRDATSRSWPRLAASTM 453 L SS + L + + N+T ++ SLS+T +++S ATS S LA+S++ Sbjct: 147 SSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNS---ATSSS---LASSSL 200 Query: 452 VSTRAASMGARGVGNLSTACTAHQPWMSRRSVWLGVGSRSAAPSCCLVIGHS-PWPSVNT 276 ST +A+ + + + + + +A ++ S+ + + + S + S P S N+ Sbjct: 201 NSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNS 260 Query: 275 QRSMLSRS 252 + S S Sbjct: 261 TTAATSAS 268
>Q9UPQ4:TRI35_HUMAN Tripartite motif-containing protein 35 - Homo sapiens (Human)| Length = 493 Score = 34.3 bits (77), Expect = 1.5 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +1 Query: 190 LCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRR 369 LC + + RD VTL G + R + R CP+ K + AD NHTL Sbjct: 20 LCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDRASPADLR--TNHTLNN 77 Query: 370 LIQ 378 L++ Sbjct: 78 LVE 80
>Q925F4:RNF37_MOUSE RING finger protein 37 - Mus musculus (Mouse)| Length = 539 Score = 34.3 bits (77), Expect = 1.5 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = +1 Query: 172 EVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAA---DRE 342 +VP FL PI++EIM P+ L SG D+ ++E+ ++ + G A + Sbjct: 258 DVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKCNLSEAAWGRVPSDPFTGLAFTPQSQ 317 Query: 343 PTPNHTLRRLIQGWCAVHAV 402 P P+ +L+ I + H++ Sbjct: 318 PLPHPSLKARIDRFLLQHSI 337
>O94941:RNF37_HUMAN RING finger protein 37 - Homo sapiens (Human)| Length = 541 Score = 34.3 bits (77), Expect = 1.5 Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 13/213 (6%) Frame = +1 Query: 172 EVPSYFLCPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAA---DRE 342 +VP FL PI++EIM P+ L SG D+ ++E+ ++ + G A + Sbjct: 258 DVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKCNRSEATWGRVPSDPFTGVAFTPHSQ 317 Query: 343 PTPNHTLRRLIQGWCAVHAVERFPTPRAPIDAARVETIVDAARRGHDLLVASLR--ELAD 516 P P+ +L+ I + H++ P + R +T + A +L + R E A+ Sbjct: 318 PLPHPSLKARIDHFLLQHSI-----PGCHL-LGRAQTAL-AVIPSSIVLPSQKRKIEQAE 370 Query: 517 IVAESD--CNRRCVESTPGAVAFLVSVIKKHAADDTPKPLESQEDQMFGAVVDSPKATSP 690 V +S+ N C +T V S T +P + D G + K + Sbjct: 371 HVPDSNFGVNASCFSATSPLVLPTTSEHTAKKMKATNEPSLTHMDCSTGPLSHEQKLSQS 430 Query: 691 EDVALSIL------YSLRLSEGSWKRVLERGDN 771 ++AL+ ++ RL+ G + + RG N Sbjct: 431 LEIALASTLGSMPSFTARLTRGQLQHLGTRGSN 463
>Q4PGL2:INO80_USTMA Putative DNA helicase INO80 - Ustilago maydis (Smut fungus)| Length = 1910 Score = 34.3 bits (77), Expect = 1.5 Identities = 26/70 (37%), Positives = 30/70 (42%) Frame = -3 Query: 585 HEERHGAWCALDAAPVAIALGDDVRELPEGRHQQVVAPPGRVHDGFHARRIDGSARGGEP 406 HE RH AA I++ DD R PE RH A R H+R I S R G Sbjct: 155 HERRHAP-----AAYERISVRDDARSAPENRHIDEPAVYRRDEYDAHSREIQPSYRRG-- 207 Query: 405 LDRVHRAPAL 376 HR+P L Sbjct: 208 ---AHRSPRL 214
>P98167:SSPO_BOVIN SCO-spondin precursor - Bos taurus (Bovine)| Length = 5146 Score = 33.9 bits (76), Expect = 2.0 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 17/87 (19%) Frame = +2 Query: 713 CIRLDSPRGAGRESWNAATISWTPWRPC*GGQATSPAR-----------------MASSF 841 C L G G E+ N + +W PW PC R + +++ Sbjct: 3923 CTELPLCPGPGCEAGNCSWTAWAPWEPCSRSCGVGQQRRLRAYHPPGPGGHWCPDVLTAY 3982 Query: 842 SKRRFPRCRQRS*PRQAPSWWRGWCRW 922 +RRF C R+ P P W W W Sbjct: 3983 QERRF--CNLRACP--VPGGWSRWSPW 4005
>Q91431:NF7O_XENLA Nuclear factor 7, ovary - Xenopus laevis (African clawed frog)| Length = 610 Score = 33.9 bits (76), Expect = 2.0 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +1 Query: 193 CPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRRL 372 CP+ +E+ +DPV ++ G + R I++ CP K+ + DR+ T N L L Sbjct: 146 CPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPECKESI--TDRKYTINRVLANL 203
>Q9VVI3:NEDD4_DROME E3 ubiquitin-protein ligase Nedd-4 - Drosophila melanogaster (Fruit| fly) Length = 1007 Score = 33.9 bits (76), Expect = 2.0 Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 21/115 (18%) Frame = -3 Query: 1452 HVISRR---VGCIQLWREARRASPDPGVHLEHLSRPFPRP----IAGGAGLHQE----QQ 1306 H ++ R + L + R PGV ++ PF R +AGGAG QE Q Sbjct: 383 HPVAHRQPEISATSLQNDLRPVREAPGVPDIAITNPFTRRAAGNMAGGAGWQQERRRQQM 442 Query: 1305 PLH---HPDRKH-------LLQHCWGRRVPRHRMQGAHRALRPSSGHSCHRPRHN 1171 LH H R+ LL ++ P+HR Q + RPS+ + H HN Sbjct: 443 QLHIQQHQQRQQQQQQNRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHN 497
>Q6S6W0:VGLX_EHV1V Glycoprotein X precursor - Equine herpesvirus 1 (strain V592)| (EHV-1) (Equine abortion virus) Length = 866 Score = 33.5 bits (75), Expect = 2.6 Identities = 28/126 (22%), Positives = 52/126 (41%) Frame = -1 Query: 767 SPRSKTLFQLPSESLSEYRMLRATSSGEVAFGESTTAPNI*SSWDSKGLGVSSAACFLMT 588 SP + T PS + ++ ATSS + STT+ +S ++ ++ T Sbjct: 63 SPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETT---TTTPTASTTT 119 Query: 587 DTRNATAPGVLSTQRRLQSLSATMSASSLRDATSRSWPRLAASTMVSTRAASMGARGVGN 408 T AP +T + + ++T + ++ AT+ S P T +T A+ + Sbjct: 120 PTTTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTAS 179 Query: 407 LSTACT 390 +T T Sbjct: 180 TTTDTT 185
>P28968:VGLX_EHV1B Glycoprotein X precursor - Equine herpesvirus 1 (strain Ab4p)| (EHV-1) (Equine abortion virus) Length = 797 Score = 33.5 bits (75), Expect = 2.6 Identities = 28/126 (22%), Positives = 52/126 (41%) Frame = -1 Query: 767 SPRSKTLFQLPSESLSEYRMLRATSSGEVAFGESTTAPNI*SSWDSKGLGVSSAACFLMT 588 SP + T PS + ++ ATSS + STT+ +S ++ ++ T Sbjct: 63 SPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETT---TTTPTASTTT 119 Query: 587 DTRNATAPGVLSTQRRLQSLSATMSASSLRDATSRSWPRLAASTMVSTRAASMGARGVGN 408 T AP +T + + ++T + ++ AT+ S P T +T A+ + Sbjct: 120 PTTTTAAPTTAATTTAVTTAASTSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTAS 179 Query: 407 LSTACT 390 +T T Sbjct: 180 TTTDTT 185
>Q495X7:TRI60_HUMAN Tripartite motif-containing protein 60 - Homo sapiens (Human)| Length = 471 Score = 33.5 bits (75), Expect = 2.6 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +1 Query: 148 MEGLPSQVEVPSYFLCPISMEIMRDPVTLSSGITYDRESIE-RWVFTDGHGECPMTK 315 ME + + V + CPI +E ++DPVT++ G + R + W D CP+ + Sbjct: 1 MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCR 57
>Q6LQU5:RSMF_PHOPR Ribosomal RNA small subunit methyltransferase F - Photobacterium| profundum (Photobacterium sp. (strain SS9)) Length = 476 Score = 33.5 bits (75), Expect = 2.6 Identities = 20/61 (32%), Positives = 29/61 (47%) Frame = +1 Query: 577 FLVSVIKKHAADDTPKPLESQEDQMFGAVVDSPKATSPEDVALSILYSLRLSEGSWKRVL 756 F V+ I+KHAA +TPK + F V D+ KA E + ++ +L W R Sbjct: 302 FFVARIRKHAAVETPKVKKRMGKFPFTIVADADKAIIAEQLQATLSITLPAESDVWVREK 361 Query: 757 E 759 E Sbjct: 362 E 362
>Q9SJT9:COPA2_ARATH Coatomer subunit alpha-2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 1218 Score = 33.5 bits (75), Expect = 2.6 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Frame = -3 Query: 549 AAPVAIALGDDVRELPEGRHQQVVAPPGRVHDGFH---ARRIDGSARGGEPLDRVHRAPA 379 A +AI LGD+V LPEG+ ++ PP + G R + G GG L+ +R A Sbjct: 773 AERLAIELGDNVPSLPEGKTPSLLMPPSPIMCGGDWPLLRVMKGIFEGG--LESANRG-A 829 Query: 378 LDESAERVVG 349 +DE E V G Sbjct: 830 VDEEEEDVEG 839
>Q96F05:CK024_HUMAN Uncharacterized protein C11orf24 precursor - Homo sapiens (Human)| Length = 449 Score = 33.5 bits (75), Expect = 2.6 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 2/131 (1%) Frame = -1 Query: 782 VSKKLSPRSKTLFQLPSESLSEYRMLRATSSGEVAFGESTTAPNI*SSWDSKGLGVSSAA 603 ++K S ++ +E S + +SG A G ++ AP +S + +++AA Sbjct: 65 LTKGTSAAHLNSMEVTTEDTSRTDVSEPATSGGAADGVTSIAPTAVAS-STTAASITTAA 123 Query: 602 CFLMTDTRNATAPGVLSTQRRLQSLSATMSASSLRDATSRSWP-RLAASTMVST-RAASM 429 + T ++AP ++ + S++ T +ASS+ A+S L A T ST R S Sbjct: 124 SSM---TVASSAPTTAASSTTVASIAPTTAASSMTAASSTPMTLALPAPTSTSTGRTPST 180 Query: 428 GARGVGNLSTA 396 A G +LSTA Sbjct: 181 TATGHPSLSTA 191
>Q68ED7:CRTC1_MOUSE CREB-regulated transcription coactivator 1 - Mus musculus (Mouse)| Length = 630 Score = 33.1 bits (74), Expect = 3.4 Identities = 40/155 (25%), Positives = 57/155 (36%), Gaps = 15/155 (9%) Frame = -1 Query: 797 STDAMVSKKLSPRSKTLFQLPSESLSEYRMLRATSSGEVAFGESTTAPNI*SSWDSKGLG 618 S A+ ++P F S+ + R+L T G G T SWDSK G Sbjct: 151 SDSALHQSTMTPSQAESFTGGSQDAHQKRVLLLTVPGMEDTGAETDKTLSKQSWDSKKAG 210 Query: 617 VSSAAC-------FLMTDTRNATA--PGVLSTQRRLQSLSATMSASSL---RDATSRSWP 474 +C F D N TA P +T L L+ S L D +P Sbjct: 211 SRPKSCEVPGINIFPSADQENTTALIPATHNTGGSLPDLTNIHFPSPLPTPLDPEEPPFP 270 Query: 473 RLAASTMVSTRAASMGARGVG---NLSTACTAHQP 378 L +S+ + A +G G G N ++ H+P Sbjct: 271 ALTSSSSTGS-LAHLGVGGAGQGMNTPSSSPQHRP 304
>Q99PQ2:TRI11_MOUSE Tripartite motif-containing protein 11 - Mus musculus (Mouse)| Length = 467 Score = 32.7 bits (73), Expect = 4.5 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 14/82 (17%) Frame = +1 Query: 193 CPISMEIMRDPVTLSSGITYDRESIER-WVFTDGHGECPMTKQQLGAADREPTPNHTLRR 369 C I ++ DPV G + RE I R W +G CP ++ +A R PN L + Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECREL--SAQRNLRPNRPLAK 73 Query: 370 LI-------------QGWCAVH 396 + QG CA H Sbjct: 74 MAEMARRLHPPSPVPQGVCAAH 95
>Q9EPC6:PROF2_RAT Profilin-2 - Rattus norvegicus (Rat)| Length = 140 Score = 32.7 bits (73), Expect = 4.5 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +3 Query: 12 SLGPPEASCLLSRYIE------LLLASCMCT*LDRQIYIQSAYTVRIRPRSNGG-----V 158 S+ P E ++ + E L L C+ + +Y+ S T+ IR +S GG V Sbjct: 42 SITPAEIDVIIGKDREGFFTNGLTLGGKKCSVIRDSLYVDSDCTMDIRTKSQGGEPTYNV 101 Query: 159 AIAGGGSVLLLVPDLHGDHAG 221 A+ G VL+ V G H G Sbjct: 102 AVGRAGRVLVFVMGKEGVHGG 122
>Q92021:NF7B_XENLA Nuclear factor 7, brain - Xenopus laevis (African clawed frog)| Length = 609 Score = 32.7 bits (73), Expect = 4.5 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +1 Query: 193 CPISMEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRRL 372 CP+ +E+ +DPV ++ G + R I++ CP ++ + DR+ T N L L Sbjct: 145 CPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESI--TDRKYTINRVLANL 202
>P60412:KR10B_HUMAN Keratin-associated protein 10-11 - Homo sapiens (Human)| Length = 298 Score = 32.7 bits (73), Expect = 4.5 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = -1 Query: 1334 AAPACTRNSSLSTTPTASISCNTAGVAECLATACRARTALSVPAADTRVTALAITARPAL 1155 AA +C R SS AS SC A C+ C+ +S + D+ + +PA Sbjct: 122 AASSCCRQSSCQPACCASSSCQPAC---CVPVCCKPVCCVSTCSEDSSSCCQQSSCQPAC 178 Query: 1154 CATSS 1140 C +SS Sbjct: 179 CTSSS 183
>A2VEC9:SSPO_HUMAN SCO-spondin precursor - Homo sapiens (Human)| Length = 5147 Score = 32.3 bits (72), Expect = 5.9 Identities = 22/87 (25%), Positives = 30/87 (34%), Gaps = 17/87 (19%) Frame = +2 Query: 713 CIRLDSPRGAGRESWNAATISWTPWRPC*GGQATSPAR-----------------MASSF 841 C L G G + N + SW PW PC R + +++ Sbjct: 3931 CTELPVCPGPGCGAGNCSWTSWAPWEPCSRSCGVGQQRRLRAYRPPGPGGHWCPNILTAY 3990 Query: 842 SKRRFPRCRQRS*PRQAPSWWRGWCRW 922 +RRF C R+ P P W W W Sbjct: 3991 QERRF--CNLRACP--VPGGWSRWSPW 4013
>P35074:RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1 - Caenorhabditis briggsae| Length = 1853 Score = 32.3 bits (72), Expect = 5.9 Identities = 19/36 (52%), Positives = 20/36 (55%) Frame = +2 Query: 179 RPTSCARSPWRSCGTL*RSRPGSPTTGKASSAGCSP 286 R S A SPW S T S P SPT G + SAG SP Sbjct: 1500 REFSPAHSPWNSGVTPNYSGPWSPTGGMSPSAGFSP 1535
>P73881:COABC_SYNY3 Coenzyme A biosynthesis bifunctional protein coaBC - Synechocystis| sp. (strain PCC 6803) Length = 402 Score = 32.3 bits (72), Expect = 5.9 Identities = 31/97 (31%), Positives = 41/97 (42%) Frame = -3 Query: 531 ALGDDVRELPEGRHQQVVAPPGRVHDGFHARRIDGSARGGEPLDRVHRAPALDESAERVV 352 A+ ++++L R ++AP G G A G R EP +HR AL Sbjct: 133 AVQRNLQQLLGDRRYHLLAPNG----GLLACDRRGVGRLAEPAQIMHRLQAL-------- 180 Query: 351 GRGLPVGGAELLLGHRALSMAVGEHPALDAFPVVGDP 241 L GG E L G R L A G LDA +G+P Sbjct: 181 ---LFTGGQEDLRGKRILITAGGTQEYLDAVRFIGNP 214
>Q5UP14:YR845_MIMIV Putative ankyrin repeat protein R845 - Mimivirus| Length = 224 Score = 32.0 bits (71), Expect = 7.7 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 1/135 (0%) Frame = +1 Query: 205 MEIMRDPVTLSSGITYDRESIERWVFTDGHGECPMTKQQLGAADREPTPNHTLRRLIQGW 384 +EI+ VTL + I D +S RW +GH + G AD +++LR + Sbjct: 89 LEIVEYLVTLGADIRIDNDSAVRWASKNGHIKTVEFLVAKG-ADIRAKNDYSLRHSSKHG 147 Query: 385 CAVHAVERFPTPRAPIDAARVETIVDAARRGHDLLVASLREL-ADIVAESDCNRRCVEST 561 + VE A + A I A+ +GH +V L E AD A++DC + T Sbjct: 148 -HIKMVEYLVAQGADVRADNDYAIKWASGKGHLEVVKYLVEKGADFRADNDCAVKWASQT 206 Query: 562 PGAVAFLVSVIKKHA 606 G V + ++ K A Sbjct: 207 -GRVEIVEYLVSKGA 220
>P35301:PRM2_PONPY Protamine-2 - Pongo pygmaeus (Orangutan)| Length = 102 Score = 32.0 bits (71), Expect = 7.7 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = -3 Query: 1326 GLHQEQQPLHHPDRKHL---LQHCWGRRVPR-HRMQGAHRALRPSSGHSC-HRPRHNRQT 1162 GL EQ ++ + H +HC RR+ R HR Q HR+ + HSC HR +H R Sbjct: 35 GLSPEQVEVYERTQGHSHYRRRHCSRRRLHRIHRQQ--HRSCKRRRRHSCRHRRKHRRGC 92 Query: 1161 RLVR 1150 R R Sbjct: 93 RTRR 96
>P59991:KR122_HUMAN Keratin-associated protein 12-2 - Homo sapiens (Human)| Length = 146 Score = 32.0 bits (71), Expect = 7.7 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 15/86 (17%) Frame = -1 Query: 1340 SPAAPACTRNSSLSTTPTASISCNTAGV-------AECLATACRA--------RTALSVP 1206 SP PAC SS + + C ++ A CL +C++ ++A+ VP Sbjct: 18 SPCQPACCVPSSCQASCCVPVGCQSSVCVPVSFKPAVCLPVSCQSSVCVPMSFKSAVCVP 77 Query: 1205 AADTRVTALAITARPALCATSSRRPS 1128 + + ++ RP +CA S + S Sbjct: 78 VSCQSSVCVPVSCRPIVCAAPSCQSS 103
>Q4WLT9:ATG9_ASPFU Autophagy-related protein 9 - Aspergillus fumigatus (Sartorya| fumigata) Length = 951 Score = 32.0 bits (71), Expect = 7.7 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Frame = -3 Query: 1401 RASPDPGVHL----EHLSRPFP--RPIAGGAGLHQEQQPLHHPDRKHLLQHCWGRRVP 1246 R P P H+ SRP P R + G +EQQPLHH DR+ W P Sbjct: 139 RLPPPPTSHITPDDRQPSRPGPSTRGVRGRGRAAKEQQPLHHADRRRAPAVRWSLGQP 196 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 280,940,070 Number of extensions: 6320131 Number of successful extensions: 23187 Number of sequences better than 10.0: 42 Number of HSP's gapped: 23138 Number of HSP's successfully gapped: 44 Length of query: 539 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 421 Effective length of database: 68,319,629 Effective search space: 28762563809 Effective search space used: 28762563809 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
