ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf70i01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059304.1| Oryza sativa (japonica cultivar-group) Os04g0417400 (Os04g0417400) mRNA, complete cds Length = 1356 Score = 289 bits (146), Expect = 2e-74 Identities = 262/298 (87%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 168 ggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgt 227 ||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||| || Sbjct: 36 ggtggaggtgctgtcctacttcgtgtgcccgatctcgctggagatcatgcgggacccggt 95 Query: 228 gacgctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttcaccga 287 |||||| ||| | |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 96 gacgctgtcgacggggatcacctacgaccgggagagcatcgagcggtgggtgttcaccga 155 Query: 288 cggccatggagagtgcccgatgaccaagcagcagctcggcgcc-gccgaccgggagccca 346 |||||| || ||||||||| |||||||||||| ||| |||||| || ||||||||||||| Sbjct: 156 cggccacggcgagtgcccggtgaccaagcagcggct-ggcgccggcggaccgggagccca 214 Query: 347 cgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgaga 406 |||||||||||||||||||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct: 215 cgcccaaccacacgctccgccgcctcatacaggggtggtgcgccgtccacgccgtcgagc 274 Query: 407 ggttccccaccccgcgcgctcccatcgatgcggcgcgcgtggaaaccatcgtggacgc 464 | ||||||||||||||| | ||| |||| || || ||||| | ||||||||||||| Sbjct: 275 gcttccccaccccgcgcccccccgtcgacgccgcccgcgtcgccgccatcgtggacgc 332 Score = 176 bits (89), Expect = 2e-40 Identities = 170/197 (86%) Strand = Plus / Plus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| |||||||| ||||| || |||||||||||||||||||| | || ||| || Sbjct: 1126 gagagcgccgtgcgcgcgctgcacgccgtggcgaggcactcggcgacgtcggcggtgctg 1185 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||||| | ||||| ||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 1186 caggagatgctgcccgtcggcgtggtggcgaggctgctcttcctggtgcaggtcggcgcc 1245 Query: 1333 gccggcgatcggccgagggaaagggcgagagagatgctcaagatgcacgccagggtctgg 1392 ||||||| ||| |||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 1246 tccggcgagcggacgagggcgagggcgagggagatgctcaagatgcacgccagggtgtgg 1305 Query: 1393 agaggctcgccgtgctt 1409 || | |||||| ||||| Sbjct: 1306 agggactcgccatgctt 1322 Score = 117 bits (59), Expect = 1e-22 Identities = 209/259 (80%) Strand = Plus / Plus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctcccgcacgcatg 829 |||||||||| |||||||||| ||||||| |||| || ||||||||||| || | ||| | Sbjct: 668 atttcttggaaaccatggcgtgcgtgctgcggcgaccgagctacctctcgcggatgcagg 727 Query: 830 gcatccagcttctcaaagcggcggtttccgagatgccgccagcgcagctgacctcggcaa 889 | ||||| || || ||| ||||| | | | |||| | || |||| |||||| ||||| | Sbjct: 728 gaatccacctgctgaaatcggcgctcccggcgatggcccccgcgcggctgacgtcggcga 787 Query: 890 gcgccgagctggtggagggggtggtgtcggtggtgacagataagctatccgggaaggcgg 949 | |||| |||||| || || |||||| ||||||| | || | || || | |||||||| Sbjct: 788 gagccgcgctggtcgacggcgtggtgggggtggtggcggacaggccgtcggcgaaggcgg 847 Query: 950 tcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccgcgtcaagg 1009 ||||| | || ||||| ||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 848 tcaaggtggcgctccacgtgctctgccggctctgcccgtgggcccggaaccgcgtcaagg 907 Query: 1010 ccgtcgaagcaggcgccgt 1028 | ||||| || |||||||| Sbjct: 908 cggtcgacgccggcgccgt 926 Score = 73.8 bits (37), Expect = 2e-09 Identities = 88/105 (83%) Strand = Plus / Plus Query: 502 agggagctcgcggacatcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcaca 561 ||||||||||| |||||||| ||||||||||| |||||||||| |||||| || || | Sbjct: 388 agggagctcgccgacatcgttgccgagagcgaccgcaaccggcggtgcgtccagggcgcc 447 Query: 562 ccaggcgccgtggcgttcctcgtgtctgtcatcaagaagcacgcc 606 | |||||||||| ||||||| |||| ||| ||||| ||| |||| Sbjct: 448 tccggcgccgtggagttcctcctgtccgtcgtcaaggagcgcgcc 492 Score = 46.1 bits (23), Expect = 0.40 Identities = 68/83 (81%) Strand = Plus / Plus Query: 676 aaggcgacctcgccggaggacgtagctctaagcattctgtattcgcttagactctccgag 735 ||||||| |||||||||||| | || || ||||| ||| ||||||| | ||||||||| Sbjct: 568 aaggcgagctcgccggaggaggcggccctgagcatcctgcattcgctcaagctctccgag 627 Query: 736 gggagctggaagagagtcttgga 758 | ||||| ||||| |||||||| Sbjct: 628 gagagcttcaagagggtcttgga 650
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 289 bits (146), Expect = 2e-74 Identities = 262/298 (87%), Gaps = 2/298 (0%) Strand = Plus / Minus Query: 168 ggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgt 227 ||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||| || Sbjct: 20620357 ggtggaggtgctgtcctacttcgtgtgcccgatctcgctggagatcatgcgggacccggt 20620298 Query: 228 gacgctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttcaccga 287 |||||| ||| | |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 20620297 gacgctgtcgacggggatcacctacgaccgggagagcatcgagcggtgggtgttcaccga 20620238 Query: 288 cggccatggagagtgcccgatgaccaagcagcagctcggcgcc-gccgaccgggagccca 346 |||||| || ||||||||| |||||||||||| ||| |||||| || ||||||||||||| Sbjct: 20620237 cggccacggcgagtgcccggtgaccaagcagcggct-ggcgccggcggaccgggagccca 20620179 Query: 347 cgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgaga 406 |||||||||||||||||||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct: 20620178 cgcccaaccacacgctccgccgcctcatacaggggtggtgcgccgtccacgccgtcgagc 20620119 Query: 407 ggttccccaccccgcgcgctcccatcgatgcggcgcgcgtggaaaccatcgtggacgc 464 | ||||||||||||||| | ||| |||| || || ||||| | ||||||||||||| Sbjct: 20620118 gcttccccaccccgcgcccccccgtcgacgccgcccgcgtcgccgccatcgtggacgc 20620061 Score = 176 bits (89), Expect = 2e-40 Identities = 170/197 (86%) Strand = Plus / Minus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| |||||||| ||||| || |||||||||||||||||||| | || ||| || Sbjct: 20619267 gagagcgccgtgcgcgcgctgcacgccgtggcgaggcactcggcgacgtcggcggtgctg 20619208 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||||| | ||||| ||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 20619207 caggagatgctgcccgtcggcgtggtggcgaggctgctcttcctggtgcaggtcggcgcc 20619148 Query: 1333 gccggcgatcggccgagggaaagggcgagagagatgctcaagatgcacgccagggtctgg 1392 ||||||| ||| |||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 20619147 tccggcgagcggacgagggcgagggcgagggagatgctcaagatgcacgccagggtgtgg 20619088 Query: 1393 agaggctcgccgtgctt 1409 || | |||||| ||||| Sbjct: 20619087 agggactcgccatgctt 20619071 Score = 117 bits (59), Expect = 1e-22 Identities = 209/259 (80%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctcccgcacgcatg 829 |||||||||| |||||||||| ||||||| |||| || ||||||||||| || | ||| | Sbjct: 20619725 atttcttggaaaccatggcgtgcgtgctgcggcgaccgagctacctctcgcggatgcagg 20619666 Query: 830 gcatccagcttctcaaagcggcggtttccgagatgccgccagcgcagctgacctcggcaa 889 | ||||| || || ||| ||||| | | | |||| | || |||| |||||| ||||| | Sbjct: 20619665 gaatccacctgctgaaatcggcgctcccggcgatggcccccgcgcggctgacgtcggcga 20619606 Query: 890 gcgccgagctggtggagggggtggtgtcggtggtgacagataagctatccgggaaggcgg 949 | |||| |||||| || || |||||| ||||||| | || | || || | |||||||| Sbjct: 20619605 gagccgcgctggtcgacggcgtggtgggggtggtggcggacaggccgtcggcgaaggcgg 20619546 Query: 950 tcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccgcgtcaagg 1009 ||||| | || ||||| ||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 20619545 tcaaggtggcgctccacgtgctctgccggctctgcccgtgggcccggaaccgcgtcaagg 20619486 Query: 1010 ccgtcgaagcaggcgccgt 1028 | ||||| || |||||||| Sbjct: 20619485 cggtcgacgccggcgccgt 20619467 Score = 91.7 bits (46), Expect = 7e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 167 aggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctg 226 |||||||||| |||||||||||| ||||||| ||||| || |||||||||| ||||| | Sbjct: 35091129 aggtggaggtgccgtcctacttcgtgtgccccatctcgctgcagatcatgcgcgacccgg 35091070 Query: 227 tgacgctctcgtccgggatcacctacgaccgggaaagcatcgagcg 272 |||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 35091069 tgacgctccccaccggcatcacctacgaccgcgacggcatcgagcg 35091024 Score = 73.8 bits (37), Expect = 2e-09 Identities = 88/105 (83%) Strand = Plus / Minus Query: 502 agggagctcgcggacatcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcaca 561 ||||||||||| |||||||| ||||||||||| |||||||||| |||||| || || | Sbjct: 20620005 agggagctcgccgacatcgttgccgagagcgaccgcaaccggcggtgcgtccagggcgcc 20619946 Query: 562 ccaggcgccgtggcgttcctcgtgtctgtcatcaagaagcacgcc 606 | |||||||||| ||||||| |||| ||| ||||| ||| |||| Sbjct: 20619945 tccggcgccgtggagttcctcctgtccgtcgtcaaggagcgcgcc 20619901 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 346 acgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgag 405 ||||||||||| ||||| || ||||||||||||| |||||||| | |||||| || ||| Sbjct: 17127176 acgcccaaccaaacgctgcggcgactcatccaggcgtggtgcgctgcgcacgccgttgag 17127235 Query: 406 aggttccccaccccgcgc 423 | ||||||||||||||| Sbjct: 17127236 cgattccccaccccgcgc 17127253 Score = 48.1 bits (24), Expect = 0.100 Identities = 33/36 (91%) Strand = Plus / Minus Query: 343 cccacgcccaaccacacgctccgccgactcatccag 378 ||||||||||||||||| || ||||| ||||||||| Sbjct: 35090962 cccacgcccaaccacaccctgcgccgcctcatccag 35090927 Score = 46.1 bits (23), Expect = 0.40 Identities = 68/83 (81%) Strand = Plus / Minus Query: 676 aaggcgacctcgccggaggacgtagctctaagcattctgtattcgcttagactctccgag 735 ||||||| |||||||||||| | || || ||||| ||| ||||||| | ||||||||| Sbjct: 20619825 aaggcgagctcgccggaggaggcggccctgagcatcctgcattcgctcaagctctccgag 20619766 Query: 736 gggagctggaagagagtcttgga 758 | ||||| ||||| |||||||| Sbjct: 20619765 gagagcttcaagagggtcttgga 20619743
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 289 bits (146), Expect = 2e-74 Identities = 262/298 (87%), Gaps = 2/298 (0%) Strand = Plus / Minus Query: 168 ggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgt 227 ||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||| || Sbjct: 54791 ggtggaggtgctgtcctacttcgtgtgcccgatctcgctggagatcatgcgggacccggt 54732 Query: 228 gacgctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttcaccga 287 |||||| ||| | |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 54731 gacgctgtcgacggggatcacctacgaccgggagagcatcgagcggtgggtgttcaccga 54672 Query: 288 cggccatggagagtgcccgatgaccaagcagcagctcggcgcc-gccgaccgggagccca 346 |||||| || ||||||||| |||||||||||| ||| |||||| || ||||||||||||| Sbjct: 54671 cggccacggcgagtgcccggtgaccaagcagcggct-ggcgccggcggaccgggagccca 54613 Query: 347 cgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgaga 406 |||||||||||||||||||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct: 54612 cgcccaaccacacgctccgccgcctcatacaggggtggtgcgccgtccacgccgtcgagc 54553 Query: 407 ggttccccaccccgcgcgctcccatcgatgcggcgcgcgtggaaaccatcgtggacgc 464 | ||||||||||||||| | ||| |||| || || ||||| | ||||||||||||| Sbjct: 54552 gcttccccaccccgcgcccccccgtcgacgccgcccgcgtcgccgccatcgtggacgc 54495 Score = 176 bits (89), Expect = 2e-40 Identities = 170/197 (86%) Strand = Plus / Minus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| |||||||| ||||| || |||||||||||||||||||| | || ||| || Sbjct: 53701 gagagcgccgtgcgcgcgctgcacgccgtggcgaggcactcggcgacgtcggcggtgctg 53642 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||||| | ||||| ||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 53641 caggagatgctgcccgtcggcgtggtggcgaggctgctcttcctggtgcaggtcggcgcc 53582 Query: 1333 gccggcgatcggccgagggaaagggcgagagagatgctcaagatgcacgccagggtctgg 1392 ||||||| ||| |||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 53581 tccggcgagcggacgagggcgagggcgagggagatgctcaagatgcacgccagggtgtgg 53522 Query: 1393 agaggctcgccgtgctt 1409 || | |||||| ||||| Sbjct: 53521 agggactcgccatgctt 53505 Score = 117 bits (59), Expect = 1e-22 Identities = 209/259 (80%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctcccgcacgcatg 829 |||||||||| |||||||||| ||||||| |||| || ||||||||||| || | ||| | Sbjct: 54159 atttcttggaaaccatggcgtgcgtgctgcggcgaccgagctacctctcgcggatgcagg 54100 Query: 830 gcatccagcttctcaaagcggcggtttccgagatgccgccagcgcagctgacctcggcaa 889 | ||||| || || ||| ||||| | | | |||| | || |||| |||||| ||||| | Sbjct: 54099 gaatccacctgctgaaatcggcgctcccggcgatggcccccgcgcggctgacgtcggcga 54040 Query: 890 gcgccgagctggtggagggggtggtgtcggtggtgacagataagctatccgggaaggcgg 949 | |||| |||||| || || |||||| ||||||| | || | || || | |||||||| Sbjct: 54039 gagccgcgctggtcgacggcgtggtgggggtggtggcggacaggccgtcggcgaaggcgg 53980 Query: 950 tcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccgcgtcaagg 1009 ||||| | || ||||| ||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 53979 tcaaggtggcgctccacgtgctctgccggctctgcccgtgggcccggaaccgcgtcaagg 53920 Query: 1010 ccgtcgaagcaggcgccgt 1028 | ||||| || |||||||| Sbjct: 53919 cggtcgacgccggcgccgt 53901 Score = 73.8 bits (37), Expect = 2e-09 Identities = 88/105 (83%) Strand = Plus / Minus Query: 502 agggagctcgcggacatcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcaca 561 ||||||||||| |||||||| ||||||||||| |||||||||| |||||| || || | Sbjct: 54439 agggagctcgccgacatcgttgccgagagcgaccgcaaccggcggtgcgtccagggcgcc 54380 Query: 562 ccaggcgccgtggcgttcctcgtgtctgtcatcaagaagcacgcc 606 | |||||||||| ||||||| |||| ||| ||||| ||| |||| Sbjct: 54379 tccggcgccgtggagttcctcctgtccgtcgtcaaggagcgcgcc 54335 Score = 46.1 bits (23), Expect = 0.40 Identities = 68/83 (81%) Strand = Plus / Minus Query: 676 aaggcgacctcgccggaggacgtagctctaagcattctgtattcgcttagactctccgag 735 ||||||| |||||||||||| | || || ||||| ||| ||||||| | ||||||||| Sbjct: 54259 aaggcgagctcgccggaggaggcggccctgagcatcctgcattcgctcaagctctccgag 54200 Query: 736 gggagctggaagagagtcttgga 758 | ||||| ||||| |||||||| Sbjct: 54199 gagagcttcaagagggtcttgga 54177
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 105 bits (53), Expect = 5e-19 Identities = 144/172 (83%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| |||||||| |||| || ||||||||||||||||||| || || ||| | Sbjct: 14722250 gagagcgccgtgcgcgc--tgcacgccatggcgaggcactcggcgacgccggcggtgcag 14722307 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||| | || ||||||||||||| ||||||||| ||||||||||||| |||| | Sbjct: 14722308 caggagatgttggctgtcggggtggtggcgaggctgctcttcctggtgcaggtcggcatc 14722367 Query: 1333 gccggcgatcggccgagggaaagggcgagagagatgctcaagatgcacgcca 1384 ||||||| | | ||| ||| |||| ||| |||||||||||||||||||||| Sbjct: 14722368 tccggcgagcagacga-ggagagggtgagggagatgctcaagatgcacgcca 14722418
>dbj|AP004802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0640D01 Length = 164996 Score = 105 bits (53), Expect = 5e-19 Identities = 144/172 (83%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| |||||||| |||| || ||||||||||||||||||| || || ||| | Sbjct: 33334 gagagcgccgtgcgcgc--tgcacgccatggcgaggcactcggcgacgccggcggtgcag 33391 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||| | || ||||||||||||| ||||||||| ||||||||||||| |||| | Sbjct: 33392 caggagatgttggctgtcggggtggtggcgaggctgctcttcctggtgcaggtcggcatc 33451 Query: 1333 gccggcgatcggccgagggaaagggcgagagagatgctcaagatgcacgcca 1384 ||||||| | | ||| ||| |||| ||| |||||||||||||||||||||| Sbjct: 33452 tccggcgagcagacga-ggagagggtgagggagatgctcaagatgcacgcca 33502
>dbj|AP004804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0680B05 Length = 138741 Score = 105 bits (53), Expect = 5e-19 Identities = 144/172 (83%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| |||||||| |||| || ||||||||||||||||||| || || ||| | Sbjct: 108117 gagagcgccgtgcgcgc--tgcacgccatggcgaggcactcggcgacgccggcggtgcag 108174 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||| | || ||||||||||||| ||||||||| ||||||||||||| |||| | Sbjct: 108175 caggagatgttggctgtcggggtggtggcgaggctgctcttcctggtgcaggtcggcatc 108234 Query: 1333 gccggcgatcggccgagggaaagggcgagagagatgctcaagatgcacgcca 1384 ||||||| | | ||| ||| |||| ||| |||||||||||||||||||||| Sbjct: 108235 tccggcgagcagacga-ggagagggtgagggagatgctcaagatgcacgcca 108285
>emb|CT831370.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111I11, full insert sequence Length = 1684 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 171 ggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgac 230 |||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 123 ggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgac 182 Query: 231 gctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttc 282 ||| || | |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 183 gctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttc 234 Score = 85.7 bits (43), Expect = 5e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 337 cgggagcccacgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcac 396 |||||| | ||||||||||||||||| || || |||||||||| |||||||| | |||| Sbjct: 304 cgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcac 363 Query: 397 gcggtcgagaggttccccaccccgcgc 423 || |||||| ||||||||||||||||| Sbjct: 364 gccgtcgagcggttccccaccccgcgc 390 Score = 50.1 bits (25), Expect = 0.025 Identities = 58/69 (84%) Strand = Plus / Plus Query: 516 catcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcacaccaggcgccgtggc 575 ||||| |||||||||||| ||||| ||||||||||||| ||| || |||||||| | Sbjct: 501 catcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcga 560 Query: 576 gttcctcgt 584 ||||||||| Sbjct: 561 gttcctcgt 569
>ref|NM_001053592.1| Oryza sativa (japonica cultivar-group) Os02g0539200 (Os02g0539200) mRNA, complete cds Length = 1643 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 171 ggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgac 230 |||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 119 ggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgac 178 Query: 231 gctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttc 282 ||| || | |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 179 gctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttc 230 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 337 cgggagcccacgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcac 396 |||||| | ||||||||||||||||| || || |||||||||| |||||||| | |||| Sbjct: 300 cgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcac 359 Query: 397 gcggtcgagaggttccccaccccgcgc 423 || |||||||||||||||||||||||| Sbjct: 360 gccgtcgagaggttccccaccccgcgc 386 Score = 50.1 bits (25), Expect = 0.025 Identities = 58/69 (84%) Strand = Plus / Plus Query: 516 catcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcacaccaggcgccgtggc 575 ||||| |||||||||||| ||||| ||||||||||||| ||| || |||||||| | Sbjct: 497 catcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcga 556 Query: 576 gttcctcgt 584 ||||||||| Sbjct: 557 gttcctcgt 565
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 171 ggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgac 230 |||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 20002452 ggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgac 20002393 Query: 231 gctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttc 282 ||| || | |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 20002392 gctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttc 20002341 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Minus Query: 337 cgggagcccacgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcac 396 |||||| | ||||||||||||||||| || || |||||||||| |||||||| | |||| Sbjct: 20002271 cgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcac 20002212 Query: 397 gcggtcgagaggttccccaccccgcgc 423 || |||||||||||||||||||||||| Sbjct: 20002211 gccgtcgagaggttccccaccccgcgc 20002185 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 349 cccaaccacacgctccgccgactcatccagggctggtgcg 388 ||||||||||| |||||||| |||||||||| |||||||| Sbjct: 20608779 cccaaccacaccctccgccgcctcatccaggactggtgcg 20608740 Score = 50.1 bits (25), Expect = 0.025 Identities = 58/69 (84%) Strand = Plus / Minus Query: 516 catcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcacaccaggcgccgtggc 575 ||||| |||||||||||| ||||| ||||||||||||| ||| || |||||||| | Sbjct: 20002074 catcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcga 20002015 Query: 576 gttcctcgt 584 ||||||||| Sbjct: 20002014 gttcctcgt 20002006 Score = 46.1 bits (23), Expect = 0.40 Identities = 41/47 (87%) Strand = Plus / Plus Query: 178 ccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccc 224 |||||||||||| |||||||||||| | |||| | ||||||||||| Sbjct: 35358852 ccgtcctacttcgtgtgcccgatcttgaaggaggtgatgcgggaccc 35358898 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Minus Query: 187 ttcttgtgcccgatctccatggagatcatgcgggaccctgtgacgctctcgtccgggatc 246 ||||||||||||||||| |||| || ||| ||||||| |||||| || | |||||| Sbjct: 30825884 ttcttgtgcccgatctcgctggacatgatgagggaccccgtgacggcgccgacggggatc 30825825 Query: 247 acctacgaccggga 260 || ||||||||||| Sbjct: 30825824 acgtacgaccggga 30825811
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 171 ggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgac 230 |||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 106573 ggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgac 106514 Query: 231 gctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttc 282 ||| || | |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 106513 gctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttc 106462 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Minus Query: 337 cgggagcccacgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcac 396 |||||| | ||||||||||||||||| || || |||||||||| |||||||| | |||| Sbjct: 106392 cgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcac 106333 Query: 397 gcggtcgagaggttccccaccccgcgc 423 || |||||||||||||||||||||||| Sbjct: 106332 gccgtcgagaggttccccaccccgcgc 106306 Score = 50.1 bits (25), Expect = 0.025 Identities = 58/69 (84%) Strand = Plus / Minus Query: 516 catcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcacaccaggcgccgtggc 575 ||||| |||||||||||| ||||| ||||||||||||| ||| || |||||||| | Sbjct: 106195 catcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcga 106136 Query: 576 gttcctcgt 584 ||||||||| Sbjct: 106135 gttcctcgt 106127
>dbj|AK108494.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-G06, full insert sequence Length = 1643 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 171 ggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgac 230 |||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 119 ggaggtgccgtcctacttcctgtgcccgatctcgctggagatcatgagggacccggtgac 178 Query: 231 gctctcgtccgggatcacctacgaccgggaaagcatcgagcgctgggtgttc 282 ||| || | |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 179 gctggcgacggggatcacctacgaccggagcagcatcgagcggtggatgttc 230 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 337 cgggagcccacgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcac 396 |||||| | ||||||||||||||||| || || |||||||||| |||||||| | |||| Sbjct: 300 cgggaggcgacgcccaaccacacgctgcggcggctcatccaggcgtggtgcgccgcgcac 359 Query: 397 gcggtcgagaggttccccaccccgcgc 423 || |||||||||||||||||||||||| Sbjct: 360 gccgtcgagaggttccccaccccgcgc 386 Score = 50.1 bits (25), Expect = 0.025 Identities = 58/69 (84%) Strand = Plus / Plus Query: 516 catcgtcgccgagagcgattgcaaccggcgctgcgtcgagagcacaccaggcgccgtggc 575 ||||| |||||||||||| ||||| ||||||||||||| ||| || |||||||| | Sbjct: 497 catcgccgccgagagcgaccgcaacaagcgctgcgtcgaggccacgcccggcgccgtcga 556 Query: 576 gttcctcgt 584 ||||||||| Sbjct: 557 gttcctcgt 565
>ref|NM_001060859.1| Oryza sativa (japonica cultivar-group) Os04g0686000 (Os04g0686000) mRNA, complete cds Length = 1591 Score = 91.7 bits (46), Expect = 7e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 167 aggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctg 226 |||||||||| |||||||||||| ||||||| ||||| || |||||||||| ||||| | Sbjct: 172 aggtggaggtgccgtcctacttcgtgtgccccatctcgctgcagatcatgcgcgacccgg 231 Query: 227 tgacgctctcgtccgggatcacctacgaccgggaaagcatcgagcg 272 |||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 232 tgacgctccccaccggcatcacctacgaccgcgacggcatcgagcg 277 Score = 48.1 bits (24), Expect = 0.100 Identities = 33/36 (91%) Strand = Plus / Plus Query: 343 cccacgcccaaccacacgctccgccgactcatccag 378 ||||||||||||||||| || ||||| ||||||||| Sbjct: 339 cccacgcccaaccacaccctgcgccgcctcatccag 374
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 91.7 bits (46), Expect = 7e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 167 aggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctg 226 |||||||||| |||||||||||| ||||||| ||||| || |||||||||| ||||| | Sbjct: 46224 aggtggaggtgccgtcctacttcgtgtgccccatctcgctgcagatcatgcgcgacccgg 46165 Query: 227 tgacgctctcgtccgggatcacctacgaccgggaaagcatcgagcg 272 |||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 46164 tgacgctccccaccggcatcacctacgaccgcgacggcatcgagcg 46119 Score = 48.1 bits (24), Expect = 0.100 Identities = 33/36 (91%) Strand = Plus / Minus Query: 343 cccacgcccaaccacacgctccgccgactcatccag 378 ||||||||||||||||| || ||||| ||||||||| Sbjct: 46057 cccacgcccaaccacaccctgcgccgcctcatccag 46022
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 91.7 bits (46), Expect = 7e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 167 aggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctg 226 |||||||||| |||||||||||| ||||||| ||||| || |||||||||| ||||| | Sbjct: 27632 aggtggaggtgccgtcctacttcgtgtgccccatctcgctgcagatcatgcgcgacccgg 27573 Query: 227 tgacgctctcgtccgggatcacctacgaccgggaaagcatcgagcg 272 |||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 27572 tgacgctccccaccggcatcacctacgaccgcgacggcatcgagcg 27527 Score = 48.1 bits (24), Expect = 0.100 Identities = 33/36 (91%) Strand = Plus / Minus Query: 343 cccacgcccaaccacacgctccgccgactcatccag 378 ||||||||||||||||| || ||||| ||||||||| Sbjct: 27465 cccacgcccaaccacaccctgcgccgcctcatccag 27430
>dbj|AK108418.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H10, full insert sequence Length = 1590 Score = 91.7 bits (46), Expect = 7e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 167 aggtggaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctg 226 |||||||||| |||||||||||| ||||||| ||||| || |||||||||| ||||| | Sbjct: 172 aggtggaggtgccgtcctacttcgtgtgccccatctcgctgcagatcatgcgcgacccgg 231 Query: 227 tgacgctctcgtccgggatcacctacgaccgggaaagcatcgagcg 272 |||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 232 tgacgctccccaccggcatcacctacgaccgcgacggcatcgagcg 277 Score = 48.1 bits (24), Expect = 0.100 Identities = 33/36 (91%) Strand = Plus / Plus Query: 343 cccacgcccaaccacacgctccgccgactcatccag 378 ||||||||||||||||| || ||||| ||||||||| Sbjct: 339 cccacgcccaaccacaccctgcgccgcctcatccag 374
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 89.7 bits (45), Expect = 3e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1241 tggcgaggcactcggcgaccccagcagtgttgcaagagatgcttgcggtcggggtggtgg 1300 |||| |||||||||||||| || || ||| |||| |||||||| || ||||| |||| || Sbjct: 29982 tggcaaggcactcggcgacgccggcggtgctgcaggagatgctggccgtcggtgtggggg 30041 Query: 1301 agaggctgctgttcctggtgcaggccggcgccgccggcgatcggccgagggaaagggcga 1360 ||||||||| ||||||||||||| ||||||| ||||||| | | |||||| ||||||| Sbjct: 30042 cgaggctgctcttcctggtgcaggtcggcgcctccggcgagcagacgagggcgagggcga 30101 Query: 1361 g 1361 | Sbjct: 30102 g 30102 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 29683 gaaggcggtcaaggtggcgctccacgtgctctgccggctctgcctttggagccggaaccg 29742 Query: 1002 cgtcaag 1008 ||||||| Sbjct: 29743 cgtcaag 29749
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 89.7 bits (45), Expect = 3e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1241 tggcgaggcactcggcgaccccagcagtgttgcaagagatgcttgcggtcggggtggtgg 1300 |||| |||||||||||||| || || ||| |||| |||||||| || ||||| |||| || Sbjct: 95637 tggcaaggcactcggcgacgccggcggtgctgcaggagatgctggccgtcggtgtggggg 95696 Query: 1301 agaggctgctgttcctggtgcaggccggcgccgccggcgatcggccgagggaaagggcga 1360 ||||||||| ||||||||||||| ||||||| ||||||| | | |||||| ||||||| Sbjct: 95697 cgaggctgctcttcctggtgcaggtcggcgcctccggcgagcagacgagggcgagggcga 95756 Query: 1361 g 1361 | Sbjct: 95757 g 95757 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 95338 gaaggcggtcaaggtggcgctccacgtgctctgccggctctgcctttggagccggaaccg 95397 Query: 1002 cgtcaag 1008 ||||||| Sbjct: 95398 cgtcaag 95404
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 89.7 bits (45), Expect = 3e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1241 tggcgaggcactcggcgaccccagcagtgttgcaagagatgcttgcggtcggggtggtgg 1300 |||| |||||||||||||| || || ||| |||| |||||||| || ||||| |||| || Sbjct: 3438853 tggcaaggcactcggcgacgccggcggtgctgcaggagatgctggccgtcggtgtggggg 3438912 Query: 1301 agaggctgctgttcctggtgcaggccggcgccgccggcgatcggccgagggaaagggcga 1360 ||||||||| ||||||||||||| ||||||| ||||||| | | |||||| ||||||| Sbjct: 3438913 cgaggctgctcttcctggtgcaggtcggcgcctccggcgagcagacgagggcgagggcga 3438972 Query: 1361 g 1361 | Sbjct: 3438973 g 3438973 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 3438554 gaaggcggtcaaggtggcgctccacgtgctctgccggctctgcctttggagccggaaccg 3438613 Query: 1002 cgtcaag 1008 ||||||| Sbjct: 3438614 cgtcaag 3438620
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 77.8 bits (39), Expect = 1e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| ||||||| ||||||||||| ||| ||| |||||| Sbjct: 22361777 gaaggcggtcaaggtggcgctccacgtgctctaccggctctgcccttggagccagaaccg 22361836 Query: 1002 cgtcaaggccgtcgaagcaggcgccgt 1028 ||||||||| ||||| || |||||||| Sbjct: 22361837 cgtcaaggcggtcgatgccggcgccgt 22361863 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| |||||||||||||| |||| ||| |||| ||||| Sbjct: 4133624 gaaggcggtcaaggtggcgctccacgtgctctgccggctttgcccttggagccgaaaccg 4133565 Query: 1002 cgtcaaggccgtcga 1016 ||||||||| ||||| Sbjct: 4133564 cgtcaaggcggtcga 4133550 Score = 61.9 bits (31), Expect = 7e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| ||||||| ||||| | ||||||| |||| ||||||| | || ||| || Sbjct: 4133353 gagagcgctatgcgcgcgctgcacgtcgtggcgacgcacacggcgacgtcggcggtgctg 4133294 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||||| || ||||| |||| || ||||||| | ||||||||||| | ||||||| Sbjct: 4133293 caggagatgctggccgtcggcgtgggggcgaggctgttcttcctggtgcaagtcggcgcc 4133234 Query: 1333 gccggcgatcggccgaggg 1351 ||||| | ||| |||||| Sbjct: 4133233 tccggcaagcggacgaggg 4133215 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctc 818 |||||||||| ||| |||||| ||||||| ||||||| ||||||||||| Sbjct: 4134220 atttcttggaaaccttggcgtgcgtgctgcggcggccgagctacctctc 4134172 Score = 44.1 bits (22), Expect = 1.6 Identities = 37/42 (88%) Strand = Plus / Minus Query: 565 ggcgccgtggcgttcctcgtgtctgtcatcaagaagcacgcc 606 |||||||||| |||||||||||| ||| ||||| ||| |||| Sbjct: 4134949 ggcgccgtggagttcctcgtgtccgtcgtcaaggagcgcgcc 4134908
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 77.8 bits (39), Expect = 1e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| ||||||| ||||||||||| ||| ||| |||||| Sbjct: 167023 gaaggcggtcaaggtggcgctccacgtgctctaccggctctgcccttggagccagaaccg 167082 Query: 1002 cgtcaaggccgtcgaagcaggcgccgt 1028 ||||||||| ||||| || |||||||| Sbjct: 167083 cgtcaaggcggtcgatgccggcgccgt 167109
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 77.8 bits (39), Expect = 1e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| ||||||| ||||||||||| ||| ||| |||||| Sbjct: 22844 gaaggcggtcaaggtggcgctccacgtgctctaccggctctgcccttggagccagaaccg 22903 Query: 1002 cgtcaaggccgtcgaagcaggcgccgt 1028 ||||||||| ||||| || |||||||| Sbjct: 22904 cgtcaaggcggtcgatgccggcgccgt 22930
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| |||||||||||||| |||| ||| |||| ||||| Sbjct: 17246 gaaggcggtcaaggtggcgctccacgtgctctgccggctttgcccttggagccgaaaccg 17187 Query: 1002 cgtcaaggccgtcga 1016 ||||||||| ||||| Sbjct: 17186 cgtcaaggcggtcga 17172 Score = 61.9 bits (31), Expect = 7e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| ||||||| ||||| | ||||||| |||| ||||||| | || ||| || Sbjct: 16975 gagagcgctatgcgcgcgctgcacgtcgtggcgacgcacacggcgacgtcggcggtgctg 16916 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||||| || ||||| |||| || ||||||| | ||||||||||| | ||||||| Sbjct: 16915 caggagatgctggccgtcggcgtgggggcgaggctgttcttcctggtgcaagtcggcgcc 16856 Query: 1333 gccggcgatcggccgaggg 1351 ||||| | ||| |||||| Sbjct: 16855 tccggcaagcggacgaggg 16837 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctc 818 |||||||||| ||| |||||| ||||||| ||||||| ||||||||||| Sbjct: 17842 atttcttggaaaccttggcgtgcgtgctgcggcggccgagctacctctc 17794 Score = 44.1 bits (22), Expect = 1.6 Identities = 37/42 (88%) Strand = Plus / Minus Query: 565 ggcgccgtggcgttcctcgtgtctgtcatcaagaagcacgcc 606 |||||||||| |||||||||||| ||| ||||| ||| |||| Sbjct: 18571 ggcgccgtggagttcctcgtgtccgtcgtcaaggagcgcgcc 18530
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 69.9 bits (35), Expect = 3e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 942 gaaggcggtcaagatcgctctccaagtgctctgccggctctgcctctggggccggaaccg 1001 ||||||||||||| | || ||||| |||||||||||||| |||| ||| |||| ||||| Sbjct: 126482 gaaggcggtcaaggtggcgctccacgtgctctgccggctttgcccttggagccgaaaccg 126423 Query: 1002 cgtcaaggccgtcga 1016 ||||||||| ||||| Sbjct: 126422 cgtcaaggcggtcga 126408 Score = 61.9 bits (31), Expect = 7e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 1213 gagagcgcggtgcgcgccctgcatgcggtggcgaggcactcggcgaccccagcagtgttg 1272 |||||||| ||||||| ||||| | ||||||| |||| ||||||| | || ||| || Sbjct: 126211 gagagcgctatgcgcgcgctgcacgtcgtggcgacgcacacggcgacgtcggcggtgctg 126152 Query: 1273 caagagatgcttgcggtcggggtggtggagaggctgctgttcctggtgcaggccggcgcc 1332 || |||||||| || ||||| |||| || ||||||| | ||||||||||| | ||||||| Sbjct: 126151 caggagatgctggccgtcggcgtgggggcgaggctgttcttcctggtgcaagtcggcgcc 126092 Query: 1333 gccggcgatcggccgaggg 1351 ||||| | ||| |||||| Sbjct: 126091 tccggcaagcggacgaggg 126073 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctc 818 |||||||||| ||| |||||| ||||||| ||||||| ||||||||||| Sbjct: 127078 atttcttggaaaccttggcgtgcgtgctgcggcggccgagctacctctc 127030 Score = 44.1 bits (22), Expect = 1.6 Identities = 37/42 (88%) Strand = Plus / Minus Query: 565 ggcgccgtggcgttcctcgtgtctgtcatcaagaagcacgcc 606 |||||||||| |||||||||||| ||| ||||| ||| |||| Sbjct: 127807 ggcgccgtggagttcctcgtgtccgtcgtcaaggagcgcgcc 127766
>emb|CR855124.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0105P02, complete sequence Length = 98540 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 346 acgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgag 405 ||||||||||| ||||| || ||||||||||||| |||||||| | |||||| || ||| Sbjct: 92270 acgcccaaccaaacgctgcggcgactcatccaggcgtggtgcgctgcgcacgccgttgag 92329 Query: 406 aggttccccaccccgcgc 423 | ||||||||||||||| Sbjct: 92330 cgattccccaccccgcgc 92347
>emb|CR855088.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0104J13, complete sequence Length = 82577 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 346 acgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgag 405 ||||||||||| ||||| || ||||||||||||| |||||||| | |||||| || ||| Sbjct: 10036 acgcccaaccaaacgctgcggcgactcatccaggcgtggtgcgctgcgcacgccgttgag 10095 Query: 406 aggttccccaccccgcgc 423 | ||||||||||||||| Sbjct: 10096 cgattccccaccccgcgc 10113
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 346 acgcccaaccacacgctccgccgactcatccagggctggtgcgcggtgcacgcggtcgag 405 ||||||||||| ||||| || ||||||||||||| |||||||| | |||||| || ||| Sbjct: 71473 acgcccaaccaaacgctgcggcgactcatccaggcgtggtgcgctgcgcacgccgttgag 71532 Query: 406 aggttccccaccccgcgc 423 | ||||||||||||||| Sbjct: 71533 cgattccccaccccgcgc 71550
>ref|NM_001053620.1| Oryza sativa (japonica cultivar-group) Os02g0548700 (Os02g0548700) mRNA, complete cds Length = 1248 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 349 cccaaccacacgctccgccgactcatccagggctggtgcg 388 ||||||||||| |||||||| |||||||||| |||||||| Sbjct: 220 cccaaccacaccctccgccgcctcatccaggactggtgcg 259
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 349 cccaaccacacgctccgccgactcatccagggctggtgcg 388 ||||||||||| |||||||| |||||||||| |||||||| Sbjct: 104337 cccaaccacaccctccgccgcctcatccaggactggtgcg 104298
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 349 cccaaccacacgctccgccgactcatccagggctggtgcg 388 ||||||||||| |||||||| |||||||||| |||||||| Sbjct: 5634 cccaaccacaccctccgccgcctcatccaggactggtgcg 5595
>emb|BX470098.15| Zebrafish DNA sequence from clone DKEY-148D16 in linkage group 12, complete sequence Length = 249826 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1432 tacccttcttgatatcacatgcaagt 1457 |||||||||||||||||||||||||| Sbjct: 53698 tacccttcttgatatcacatgcaagt 53723
>emb|AL954768.7| Zebrafish DNA sequence from clone CH211-254L23 in linkage group 12, complete sequence Length = 159442 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1432 tacccttcttgatatcacatgcaagt 1457 |||||||||||||||||||||||||| Sbjct: 156252 tacccttcttgatatcacatgcaagt 156227
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctc 818 |||||||||| ||| |||||| ||||||| ||| ||| ||||||||||| Sbjct: 24526302 atttcttggaaaccttggcgtgcgtgctgcggccgccgagctacctctc 24526254 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 191 tgtgcccgatctccatggagatcatgcgggaccc 224 ||||||||||| |||||||| | ||||||||||| Sbjct: 10256161 tgtgcccgatcaccatggaggtgatgcgggaccc 10256128
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Minus Query: 770 atttcttggacaccatggcgtccgtgctgaggcggccaagctacctctc 818 |||||||||| ||| |||||| ||||||| ||| ||| ||||||||||| Sbjct: 97333 atttcttggaaaccttggcgtgcgtgctgcggccgccgagctacctctc 97285
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1223 tgcgcgccctgcatgcggtggcga 1246 |||||||||||||||||||||||| Sbjct: 1709128 tgcgcgccctgcatgcggtggcga 1709151
>emb|CT828998.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA112E04, full insert sequence Length = 1399 Score = 48.1 bits (24), Expect = 0.100 Identities = 36/40 (90%) Strand = Plus / Plus Query: 349 cccaaccacacgctccgccgactcatccagggctggtgcg 388 ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 303 cccaaccacacccttcgccgcctcatccaggactggtgcg 342
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1223 tgcgcgccctgcatgcggtggcga 1246 |||||||||||||||||||||||| Sbjct: 2528159 tgcgcgccctgcatgcggtggcga 2528136
>dbj|AK243658.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100088O21, full insert sequence Length = 3071 Score = 46.1 bits (23), Expect = 0.40 Identities = 41/47 (87%) Strand = Plus / Plus Query: 178 ccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccc 224 |||||||||||| |||||||||||| | |||| | ||||||||||| Sbjct: 2609 ccgtcctacttcgtgtgcccgatcttgaaggaggtgatgcgggaccc 2655
>ref|NM_001055099.1| Oryza sativa (japonica cultivar-group) Os02g0822900 (Os02g0822900) mRNA, complete cds Length = 2568 Score = 46.1 bits (23), Expect = 0.40 Identities = 41/47 (87%) Strand = Plus / Plus Query: 178 ccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccc 224 |||||||||||| |||||||||||| | |||| | ||||||||||| Sbjct: 2311 ccgtcctacttcgtgtgcccgatcttgaaggaggtgatgcgggaccc 2357
>ref|NM_001051435.1| Oryza sativa (japonica cultivar-group) Os01g0865700 (Os01g0865700) mRNA, complete cds Length = 1215 Score = 46.1 bits (23), Expect = 0.40 Identities = 53/63 (84%) Strand = Plus / Plus Query: 172 gaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgacg 231 ||||| |||||||||||| | ||||||||||| || || ||||||| ||||| || ||| Sbjct: 19 gaggtgccgtcctacttcgtctgcccgatctcgctgcagctcatgcgcgaccccgtcacg 78 Query: 232 ctc 234 ||| Sbjct: 79 ctc 81 Score = 46.1 bits (23), Expect = 0.40 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1367 tgctcaagatgcacgccagggtctggagaggctcgccgtgctt 1409 |||||||| ||||| ||||||||||||| | |||||| ||||| Sbjct: 1139 tgctcaagctgcactccagggtctggagggcctcgccatgctt 1181
>ref|NM_001045028.1| Danio rerio similar to Enabled protein homolog (LOC563805), mRNA Length = 2644 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 900 ggtggagggggtggtgtcggtgg 922 ||||||||||||||||||||||| Sbjct: 1626 ggtggagggggtggtgtcggtgg 1604
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.40 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1367 tgctcaagatgcacgccagggtctggagaggctcgccgtgctt 1409 |||||||| ||||| ||||||||||||| | |||||| ||||| Sbjct: 37457605 tgctcaagctgcactccagggtctggagggcctcgccatgctt 37457563 Score = 46.1 bits (23), Expect = 0.40 Identities = 53/63 (84%) Strand = Plus / Minus Query: 172 gaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgacg 231 ||||| |||||||||||| | ||||||||||| || || ||||||| ||||| || ||| Sbjct: 37458725 gaggtgccgtcctacttcgtctgcccgatctcgctgcagctcatgcgcgaccccgtcacg 37458666 Query: 232 ctc 234 ||| Sbjct: 37458665 ctc 37458663
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 46.1 bits (23), Expect = 0.40 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1367 tgctcaagatgcacgccagggtctggagaggctcgccgtgctt 1409 |||||||| ||||| ||||||||||||| | |||||| ||||| Sbjct: 52142 tgctcaagctgcactccagggtctggagggcctcgccatgctt 52100 Score = 46.1 bits (23), Expect = 0.40 Identities = 53/63 (84%) Strand = Plus / Minus Query: 172 gaggttccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccctgtgacg 231 ||||| |||||||||||| | ||||||||||| || || ||||||| ||||| || ||| Sbjct: 53262 gaggtgccgtcctacttcgtctgcccgatctcgctgcagctcatgcgcgaccccgtcacg 53203 Query: 232 ctc 234 ||| Sbjct: 53202 ctc 53200
>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20, complete sequence Length = 208583 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 900 ggtggagggggtggtgtcggtgg 922 ||||||||||||||||||||||| Sbjct: 26966 ggtggagggggtggtgtcggtgg 26944
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 46.1 bits (23), Expect = 0.40 Identities = 41/47 (87%) Strand = Plus / Plus Query: 178 ccgtcctacttcttgtgcccgatctccatggagatcatgcgggaccc 224 |||||||||||| |||||||||||| | |||| | ||||||||||| Sbjct: 19400 ccgtcctacttcgtgtgcccgatcttgaaggaggtgatgcgggaccc 19446
>ref|NM_001078155.1| Bos taurus kinesin family member 3C (KIF3C), mRNA gb|BC126505.1| Bos taurus kinesin family member 3C, mRNA (cDNA clone MGC:139476 IMAGE:8214782), complete cds Length = 5160 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 899 tggtggagggggtggtgtcggtggtg 924 ||||||||||||||||| |||||||| Sbjct: 1184 tggtggagggggtggtggcggtggtg 1209
>dbj|AK243317.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100056J12, full insert sequence Length = 1623 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 187 ttcttgtgcccgatctccatggagatcatgcgggaccctgtgacgctctcgtccgggatc 246 ||||||||||||||||| |||| || ||| ||||||| |||||| || | |||||| Sbjct: 220 ttcttgtgcccgatctcgctggacatgatgagggaccccgtgacggcgccgacggggatc 279 Query: 247 acctacgaccggga 260 || ||||||||||| Sbjct: 280 acgtacgaccggga 293
>ref|NM_001073097.1| Oryza sativa (japonica cultivar-group) Os12g0277000 (Os12g0277000) mRNA, complete cds Length = 2863 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 191 tgtgcccgatctccatggagatcatgcgggaccc 224 ||||||||||| |||||||| | ||||||||||| Sbjct: 207 tgtgcccgatcaccatggaggtgatgcgggaccc 240
>ref|NM_001054594.1| Oryza sativa (japonica cultivar-group) Os02g0738200 (Os02g0738200) mRNA, complete cds Length = 1359 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 187 ttcttgtgcccgatctccatggagatcatgcgggaccctgtgacgctctcgtccgggatc 246 ||||||||||||||||| |||| || ||| ||||||| |||||| || | |||||| Sbjct: 127 ttcttgtgcccgatctcgctggacatgatgagggaccccgtgacggcgccgacggggatc 186 Query: 247 acctacgaccggga 260 || ||||||||||| Sbjct: 187 acgtacgaccggga 200
>gb|AC182809.1| Gasterosteus aculeatus clone VMRC28-105K14, complete sequence Length = 134684 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 901 gtggagggggtggtgtcggtgg 922 |||||||||||||||||||||| Sbjct: 81138 gtggagggggtggtgtcggtgg 81117
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 agcagcagctcggcgccgccga 335 |||||||||||||||||||||| Sbjct: 4181855 agcagcagctcggcgccgccga 4181876
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Minus Query: 187 ttcttgtgcccgatctccatggagatcatgcgggaccctgtgacgctctcgtccgggatc 246 ||||||||||||||||| |||| || ||| ||||||| |||||| || | |||||| Sbjct: 9461 ttcttgtgcccgatctcgctggacatgatgagggaccccgtgacggcgccgacggggatc 9402 Query: 247 acctacgaccggga 260 || ||||||||||| Sbjct: 9401 acgtacgaccggga 9388
>dbj|AK099846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109F13, full insert sequence Length = 2864 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 191 tgtgcccgatctccatggagatcatgcgggaccc 224 ||||||||||| |||||||| | ||||||||||| Sbjct: 208 tgtgcccgatcaccatggaggtgatgcgggaccc 241
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 191 tgtgcccgatctccatggagatcatgcgggaccc 224 ||||||||||| |||||||| | ||||||||||| Sbjct: 19080 tgtgcccgatcaccatggaggtgatgcgggaccc 19047
>gb|AC184153.2| Pan troglodytes FOSMID clone CH1251-6107M19 from chromosome y, complete sequence Length = 40897 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 atagctagatagacaaatatatata 110 |||| |||||||||||||||||||| Sbjct: 17024 atagatagatagacaaatatatata 17000
>ref|XM_001236720.1| PREDICTED: Gallus gallus similar to Sucrase-isomaltase, intestinal (LOC777251), partial mRNA Length = 1155 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1294 gtggtggagaggctgctgttc 1314 ||||||||||||||||||||| Sbjct: 454 gtggtggagaggctgctgttc 474
>gb|AC160058.2| Pan troglodytes BAC clone CH251-439J22 from chromosome 6, complete sequence Length = 177658 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 447 ggaaaccatcgtggacgcggccagg 471 |||||||| |||||||||||||||| Sbjct: 164520 ggaaaccaacgtggacgcggccagg 164544
>ref|NM_001068341.1| Oryza sativa (japonica cultivar-group) Os08g0415600 (Os08g0415600) mRNA, complete cds Length = 2085 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 cgccgtggcgttcctcgtgtc 587 ||||||||||||||||||||| Sbjct: 1155 cgccgtggcgttcctcgtgtc 1175
>dbj|AB248515.1| Nicotiana benthamiana mRNA for hypothetical protein, complete cds, clone: NbCD3U14 Length = 1480 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 tacgaccgggaaagcatcgag 270 ||||||||||||||||||||| Sbjct: 175 tacgaccgggaaagcatcgag 195
>ref|XM_001081334.1| PREDICTED: Rattus norvegicus tubulin tyrosine ligase-like family, member 6 (predicted) (Ttll6_predicted), mRNA Length = 2500 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 cggggtggtggagaggctgct 1310 ||||||||||||||||||||| Sbjct: 1806 cggggtggtggagaggctgct 1786
>ref|XM_220904.4| PREDICTED: Rattus norvegicus tubulin tyrosine ligase-like family, member 6 (predicted) (Ttll6_predicted), mRNA Length = 2500 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 cggggtggtggagaggctgct 1310 ||||||||||||||||||||| Sbjct: 1806 cggggtggtggagaggctgct 1786
>ref|NM_117217.1| Arabidopsis thaliana kinase (AT4G11460) mRNA, complete cds Length = 2103 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1570 agtttgatgatctctgaaatt 1590 ||||||||||||||||||||| Sbjct: 1512 agtttgatgatctctgaaatt 1492
>gb|AC151715.3| Mus musculus BAC clone RP23-396L12 from chromosome 7, complete sequence Length = 204221 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1292 gggtggtggagaggctgctgt 1312 ||||||||||||||||||||| Sbjct: 147929 gggtggtggagaggctgctgt 147909
>gb|AC068500.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-175C13, complete sequence Length = 201878 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 900 ggtggagggggtggtgtcggtggtgacagataa 932 |||||||||||||||| ||||||||| ||||| Sbjct: 75964 ggtggagggggtggtgatggtggtgactgataa 75996
>gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome 7, complete sequence Length = 145046 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1292 gggtggtggagaggctgctgt 1312 ||||||||||||||||||||| Sbjct: 36724 gggtggtggagaggctgctgt 36704
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1318 gtgcaggccggcgccgccggc 1338 ||||||||||||||||||||| Sbjct: 2400268 gtgcaggccggcgccgccggc 2400248
>gb|AC093269.3| Homo sapiens chromosome 5 clone RP11-302I6, complete sequence Length = 132720 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 624 gcctttagaatcccaggagga 644 ||||||||||||||||||||| Sbjct: 73574 gcctttagaatcccaggagga 73594
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 cgccgtggcgttcctcgtgtc 587 ||||||||||||||||||||| Sbjct: 19869261 cgccgtggcgttcctcgtgtc 19869281 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 catgcatgtgtacatagctag 93 ||||||||||||||||||||| Sbjct: 26839810 catgcatgtgtacatagctag 26839830
>dbj|BS000676.1| Pan troglodytes chromosome Y clone:PTFY-037C19, complete sequences Length = 38921 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 atagctagatagacaaatatatata 110 |||| |||||||||||||||||||| Sbjct: 32326 atagatagatagacaaatatatata 32302
>emb|AL603906.4| Human DNA sequence from clone RP11-191O20 on chromosome 10, complete sequence Length = 59280 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 964 caagtgctctgccggctctgc 984 ||||||||||||||||||||| Sbjct: 54603 caagtgctctgccggctctgc 54583
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1051 ctggatgagtgttgtggagga 1071 ||||||||||||||||||||| Sbjct: 12372 ctggatgagtgttgtggagga 12352
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1570 agtttgatgatctctgaaatt 1590 ||||||||||||||||||||| Sbjct: 17268 agtttgatgatctctgaaatt 17248
>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project) Length = 80019 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1570 agtttgatgatctctgaaatt 1590 ||||||||||||||||||||| Sbjct: 38619 agtttgatgatctctgaaatt 38599
>ref|NM_001008450.1| Gallus gallus leucine zipper and CTNNBIP1 domain containing (LZIC), mRNA emb|AJ719972.1| Gallus gallus mRNA for hypothetical protein, clone 8o19 Length = 3406 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1313 tcctggtgcaggccggcgccgccgg 1337 |||||| |||||||||||||||||| Sbjct: 26 tcctggggcaggccggcgccgccgg 2
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 cgccgtggcgttcctcgtgtc 587 ||||||||||||||||||||| Sbjct: 37439 cgccgtggcgttcctcgtgtc 37459
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 catgcatgtgtacatagctag 93 ||||||||||||||||||||| Sbjct: 183152 catgcatgtgtacatagctag 183172
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 catgcatgtgtacatagctag 93 ||||||||||||||||||||| Sbjct: 102600 catgcatgtgtacatagctag 102620
>gb|AY110090.1| Zea mays CL30167_1 mRNA sequence Length = 1086 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 911 tggtgtcggtggtgacagata 931 ||||||||||||||||||||| Sbjct: 527 tggtgtcggtggtgacagata 507
>emb|CR450781.12| Zebrafish DNA sequence from clone DKEY-20O6 in linkage group 24, complete sequence Length = 215010 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1511 tcctaattttgccatttttgg 1531 ||||||||||||||||||||| Sbjct: 96456 tcctaattttgccatttttgg 96476
>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence Length = 193459 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1491 caatttgtcttttttaggttt 1511 ||||||||||||||||||||| Sbjct: 124817 caatttgtcttttttaggttt 124837 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 241,272,328 Number of extensions: 13064122 Number of successful extensions: 267263 Number of sequences better than 10.0: 79 Number of HSP's gapped: 267253 Number of HSP's successfully gapped: 132 Length of query: 1619 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1596 Effective length of database: 18,503,978,556 Effective search space: 29532349775376 Effective search space used: 29532349775376 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
