ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf63m21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK061591:Os02g0614200 113 1e-25
2AK101718:Os03g0746800 28 6.2
3AY224438:Os05g0227600 27 8.0
4AK109715:Os10g0563600 27 8.1
5AK067167:Os10g0563600 27 8.1

>AK061591:Os02g0614200 |
          Length = 144
 Score =  113 bits (282), Expect = 1e-25
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +3

Query: 180 WDSLVVCVAPDEEKITRRSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLPH 332
           WD+LVVC APDEEKITRRSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLPH
Sbjct: 49  WDALVVCAAPDEEKITRRSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLPH 99



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>AK101718:Os03g0746800 |
          Length = 435

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 564 YKPTQLTFLNSSNSTYSLEGYFYLP-QATSSKITQLACLGHLPQDP 430
           Y PT L+   S++  +++ G   +P QATS   T+L  + H  +DP
Sbjct: 312 YIPTSLSSSFSADLLWTVMGASNMPNQATSQLCTRLKIIPHFKKDP 357



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>AY224438:Os05g0227600 |
          Length = 416

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 207 PDEEKITRRSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLPH 332
           P+ +   +  P  +P    +PKP  +P+  P+  P   P PH
Sbjct: 126 PEPKPEPKPEPKPYPEPKPEPKPEPKPEPKPEPKPKPEPKPH 167



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>AK109715:Os10g0563600 |
          Length = 211

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 457 SQLSNFG*GGLW*IEISFQRICGV 528
           ++ + FG G  W +E++FQR+ GV
Sbjct: 96  NEFAQFGAGCFWGVELAFQRVPGV 119



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>AK067167:Os10g0563600 |
          Length = 263

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 457 SQLSNFG*GGLW*IEISFQRICGV 528
           ++ + FG G  W +E++FQR+ GV
Sbjct: 96  NEFAQFGAGCFWGVELAFQRVPGV 119


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,261,016
Number of extensions: 211441
Number of successful extensions: 907
Number of sequences better than 10.0: 5
Number of HSP's gapped: 870
Number of HSP's successfully gapped: 5
Length of query: 203
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 107
Effective length of database: 11,555,919
Effective search space: 1236483333
Effective search space used: 1236483333
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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