ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62n14 |
|---|---|
| Clone Library Name | barley_pub |
>P24805:TSJT1_TOBAC Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco)| Length = 149 Score = 104 bits (260), Expect = 6e-22 Identities = 52/128 (40%), Positives = 77/128 (60%) Frame = +1 Query: 154 GSRTPSPKTRASELVKRFLAGADPAVSVELGSLGNLAYSHVKESLLLPRSFAAKDEIFCL 333 G + KTR E+ + F + L + +A+SH E+ L PRS D++FC+ Sbjct: 22 GIQKKEAKTR-EEIAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCI 80 Query: 334 FEGVLDNLGRLSQQYGLSKGSNEVLLVIEAYKTLRDRAPYPASFMLSQLAGSYAFVLFDK 513 F G LDN L + YGLS+ + E ++++EAYK LRDRAPYP ++ +L G +AF+LFD Sbjct: 81 FSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDS 140 Query: 514 STSSLFVA 537 S+LF+A Sbjct: 141 KASTLFLA 148
>Q43011:ASNS_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] - Oryza sativa subsp.| japonica (Rice) Length = 591 Score = 54.3 bits (129), Expect = 9e-07 Identities = 31/90 (34%), Positives = 45/90 (50%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G +AFVL D S A D G PL+ G DG V FS ++ L C + ++ Sbjct: 114 VDMLDGMFAFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCERFIS 173 Query: 649 PFPQGCFYWNALGGLKSYENPKNKVTAVPA 738 FP G Y + GGL+ + NP ++P+ Sbjct: 174 -FPPGHLYSSKTGGLRRWYNPPWFSESIPS 202
>P49094:ASNS_MAIZE Asparagine synthetase [glutamine-hydrolyzing] - Zea mays (Maize)| Length = 586 Score = 52.8 bits (125), Expect = 3e-06 Identities = 31/90 (34%), Positives = 43/90 (47%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G ++FVL D S A D G PL+ G DG V FS ++ L C + + Sbjct: 114 VDMLDGMFSFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCERFIT 173 Query: 649 PFPQGCFYWNALGGLKSYENPKNKVTAVPA 738 FP G Y + GGL+ + NP VP+ Sbjct: 174 -FPPGHLYSSKTGGLRRWYNPPWFSETVPS 202
>P49078:ASNS_ARATH Asparagine synthetase [glutamine-hydrolyzing] - Arabidopsis| thaliana (Mouse-ear cress) Length = 584 Score = 51.6 bits (122), Expect = 6e-06 Identities = 33/94 (35%), Positives = 45/94 (47%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G ++FVL D +S VA D G L+ G DG V S ++ L C + Sbjct: 114 VDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC-EHFE 172 Query: 649 PFPQGCFYWNALGGLKSYENPKNKVTAVPADEEE 750 FP G FY + LGG K + NP +VP+ E Sbjct: 173 TFPPGHFYSSKLGGFKQWYNPPWFNESVPSTPYE 206
>P22106:ASNB_ECOLI Asparagine synthetase B [glutamine-hydrolyzing] - Escherichia coli| Length = 554 Score = 45.8 bits (107), Expect = 3e-04 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 L L G +AF L+D + + D G +PL+ G G + + ++ L C +++ Sbjct: 115 LDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIK 173 Query: 649 PFPQGCFYWNALGGLKSY 702 FP G + W+ G ++SY Sbjct: 174 EFPAGSYLWSQDGEIRSY 191
>O24338:ASNS_SANAU Asparagine synthetase [glutamine-hydrolyzing] - Sandersonia| aurantiaca (Christmas-bells) (Chinese-lantern lily) Length = 525 Score = 44.7 bits (104), Expect = 7e-04 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G ++FVL D +S A D G PL+ G DG V S ++ L C + Sbjct: 114 IHMLDGIFSFVLLDSRNNSFVAARDAIGVTPLYIGWGLDGSVWISSEMKGLNDDC-EHFK 172 Query: 649 PFPQGCFYWNALGGLKSYENP---KNKVTAVPAD 741 FP G Y + G K + NP + +VP D Sbjct: 173 FFPPGHLYSSKEGSFKRWYNPPWFSEVIPSVPFD 206
>P31752:ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] - Asparagus| officinalis (Garden asparagus) Length = 590 Score = 42.7 bits (99), Expect = 0.003 Identities = 26/90 (28%), Positives = 40/90 (44%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G ++FVL D + A D G PL+ G DG V S ++ L C + Sbjct: 114 VDMLDGMFSFVLLDTRNNCFVAARDAVGITPLYIGWGLDGSVWLSSEMKGLNDDC-EHFE 172 Query: 649 PFPQGCFYWNALGGLKSYENPKNKVTAVPA 738 FP G Y + G + + NP+ +P+ Sbjct: 173 VFPPGNLYSSRSGSFRRWYNPQWYNETIPS 202
>P78753:ASNS_SCHPO Probable asparagine synthetase [glutamine-hydrolyzing] -| Schizosaccharomyces pombe (Fission yeast) Length = 557 Score = 40.8 bits (94), Expect = 0.010 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = +1 Query: 472 SQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADG--CVAFSDDIDLLKGSCGKSL 645 + L G +++VL+D+ + A DP G L+ G ++D F+ ++ L C K + Sbjct: 116 NMLDGMFSWVLYDQDKDKVVAARDPIGITTLYQGFSSDSPDTAYFASELKALHPVCDKII 175 Query: 646 APFPQGCFYWNALGGLKSYENP----KNKVTAVPAD 741 A FP G +Y + Y P +NK+ + P D Sbjct: 176 A-FPPGHYYDSETKQTVRYFKPSWWDENKIPSNPVD 210
>P49091:ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing] - Brassica oleracea| (Wild cabbage) Length = 586 Score = 40.4 bits (93), Expect = 0.013 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G ++FVL D +S VA D G L+ G DG + S ++ L C + Sbjct: 114 VDMLDGIFSFVLLDTRDNSFMVARDAVGVTSLYIGWGLDGSLWVSSEMKGLHEDC-EHFE 172 Query: 649 PFPQGCFYWN-ALGGLKSYENPKNKVTAVPADEEE 750 FP G Y + + GG K + NP +VP+ E Sbjct: 173 AFPPGHLYSSKSGGGFKQWYNPPWFNESVPSTPYE 207
>P19252:ASNS2_PEA Asparagine synthetase, root [glutamine-hydrolyzing] - Pisum sativum| (Garden pea) Length = 583 Score = 40.0 bits (92), Expect = 0.017 Identities = 27/90 (30%), Positives = 40/90 (44%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLLKGSCGKSLA 648 + L G ++FV D +S VA D G L+ G DG V S ++ L C + Sbjct: 114 VDMLDGIFSFVPLDTRDNSYIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC-EHFE 172 Query: 649 PFPQGCFYWNALGGLKSYENPKNKVTAVPA 738 FP G Y + G + + NP A+P+ Sbjct: 173 CFPPGHLYSSKDSGFRRWYNPSWYSEAIPS 202
>Q04489:YMJ6_YEAST Uncharacterized protein YML096W - Saccharomyces cerevisiae (Baker's| yeast) Length = 525 Score = 39.3 bits (90), Expect = 0.029 Identities = 25/96 (26%), Positives = 44/96 (45%) Frame = +1 Query: 298 RSFAAKDEIFCLFEGVLDNLGRLSQQYGLSKGSNEVLLVIEAYKTLRDRAPYPASFMLSQ 477 +S D F F G L N +S+G N+ L + + L++ ++ Sbjct: 81 QSINVDDRYFLQFNGELYNKE-------ISQGDNDSLYIASMLQNLKEGMG--VIDVIKS 131 Query: 478 LAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITAD 585 L G YA+ ++D ++S L+ DP G+ L + +T D Sbjct: 132 LEGEYAYTIYDVNSSKLYFGRDPIGRRSLSYSVTPD 167
>P49090:ASNS2_YEAST Asparagine synthetase [glutamine-hydrolyzing] 2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 572 Score = 38.5 bits (88), Expect = 0.050 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%) Frame = +1 Query: 478 LAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADG--CVAFSDDIDLLKGSCGKSLAP 651 L G +AF L+D + A DP G V L+ G ++ V F+ ++ L C S+ Sbjct: 116 LDGMFAFCLYDSKKDRIVAARDPIGVVTLYMGRSSQSPETVYFASELKCLTDVC-DSIIS 174 Query: 652 FPQGCFYWNALGGLKSYENP----KNKVTAVPADEEEI 753 FP G Y + + Y P + ++ + P D I Sbjct: 175 FPPGHVYDSETDKITRYFTPDWLDEKRIPSTPVDYHAI 212
>P64247:ASNH_MYCTU Putative asparagine synthetase [glutamine-hydrolyzing] -| Mycobacterium tuberculosis Length = 652 Score = 37.7 bits (86), Expect = 0.085 Identities = 22/52 (42%), Positives = 27/52 (51%) Frame = +1 Query: 466 MLSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLL 621 +L +L G +AF L+D T LF A DP G PLF A G S+ LL Sbjct: 130 VLQRLRGMFAFALWDTVTRELFCARDPFGIKPLFIATGAGGTAVASEKKCLL 181
>P64248:ASNH_MYCBO Putative asparagine synthetase [glutamine-hydrolyzing] -| Mycobacterium bovis Length = 652 Score = 37.7 bits (86), Expect = 0.085 Identities = 22/52 (42%), Positives = 27/52 (51%) Frame = +1 Query: 466 MLSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDDIDLL 621 +L +L G +AF L+D T LF A DP G PLF A G S+ LL Sbjct: 130 VLQRLRGMFAFALWDTVTRELFCARDPFGIKPLFIATGAGGTAVASEKKCLL 181
>Q01149:CO1A2_MOUSE Collagen alpha-2(I) chain precursor - Mus musculus (Mouse)| Length = 1372 Score = 37.4 bits (85), Expect = 0.11 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSL 452 RGSPG+ G+A PA P RG+PG RGL A+G+ + Sbjct: 387 RGSPGEAGSAGPAGPP---GLRGSPGSRGLPGADGRAGV 422
>Q5R6W9:ASNS_PONPY Asparagine synthetase [glutamine-hydrolyzing] - Pongo pygmaeus| (Orangutan) Length = 561 Score = 37.0 bits (84), Expect = 0.14 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 + L G +AFVL D +T +F+ D G PLF +T DG +A Sbjct: 114 ICMLDGVFAFVLLDTATKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>Q5ZJU3:ASNS_CHICK Asparagine synthetase [glutamine-hydrolyzing] - Gallus gallus| (Chicken) Length = 561 Score = 37.0 bits (84), Expect = 0.14 Identities = 26/89 (29%), Positives = 43/89 (48%) Frame = +1 Query: 322 IFCLFEGVLDNLGRLSQQYGLSKGSNEVLLVIEAYKTLRDRAPYPASFMLSQLAGSYAFV 501 ++ + G + N +L +Q+G + L+ E L +R + S L G +AF+ Sbjct: 70 LWLCYNGEIYNFKQLQEQFGFEY---QTLVDGEVILHLYNRGGIEQT--ASMLDGVFAFI 124 Query: 502 LFDKSTSSLFVASDPEGKVPLFWGITADG 588 L D + +F+A D G PLF +T DG Sbjct: 125 LLDTANRKVFLARDTYGVRPLFKVLTDDG 153
>P02466:CO1A2_RAT Collagen alpha-2(I) chain precursor - Rattus norvegicus (Rat)| Length = 1372 Score = 36.6 bits (83), Expect = 0.19 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSL 452 RGSPG+ G+A PA P RG+PG RGL A+G+ + Sbjct: 387 RGSPGEPGSAGPAGPP---GLRGSPGSRGLPGADGRAGV 422
>P49088:ASNS_RAT Asparagine synthetase [glutamine-hydrolyzing] - Rattus norvegicus| (Rat) Length = 561 Score = 35.0 bits (79), Expect = 0.55 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 + L G +AF+L D + +F+ D G PLF +T DG +A Sbjct: 114 ICMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKALTEDGFLA 156
>P08243:ASNS_HUMAN Asparagine synthetase [glutamine-hydrolyzing] - Homo sapiens| (Human) Length = 561 Score = 35.0 bits (79), Expect = 0.55 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 + L G +AFVL D + +F+ D G PLF +T DG +A Sbjct: 114 ICMLDGVFAFVLLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>P17140:CO4A2_CAEEL Collagen alpha-2(IV) chain precursor - Caenorhabditis elegans| Length = 1758 Score = 34.7 bits (78), Expect = 0.72 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 G PG+ G A PA R Q G PG GL+ +G LP Sbjct: 1018 GLPGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLP 1056
>Q61024:ASNS_MOUSE Asparagine synthetase [glutamine-hydrolyzing] - Mus musculus| (Mouse) Length = 561 Score = 34.7 bits (78), Expect = 0.72 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 + L G +AF+L D + +F+ D G PLF +T DG +A Sbjct: 114 ICMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>P17714:ASNS_MESAU Asparagine synthetase [glutamine-hydrolyzing] - Mesocricetus| auratus (Golden hamster) Length = 561 Score = 34.7 bits (78), Expect = 0.72 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 + L G +AF+L D + +F+ D G PLF +T DG +A Sbjct: 114 ICMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>P19891:ASNS_CRIGR Asparagine synthetase [glutamine-hydrolyzing] - Cricetulus griseus| (Chinese hamster) Length = 561 Score = 34.7 bits (78), Expect = 0.72 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 + L G +AF+L D + +F+ D G PLF +T DG +A Sbjct: 114 ICMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>Q1LZA3:ASNS_BOVIN Asparagine synthetase [glutamine-hydrolyzing] - Bos taurus (Bovine)| Length = 561 Score = 34.3 bits (77), Expect = 0.94 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +1 Query: 478 LAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVA 597 L G +AF+L D + +F+ D G PLF +T DG +A Sbjct: 117 LDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLA 156
>P12106:CO9A1_CHICK Collagen alpha-1(IX) chain precursor - Gallus gallus (Chicken)| Length = 920 Score = 33.9 bits (76), Expect = 1.2 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = +3 Query: 339 GSPGQLGAAEP-AVRPLQGQQ--RGAPGDRGLQDAEGQGSLP 455 G+PG G+ P R L G + RGAPG RGLQ +G LP Sbjct: 704 GNPGDPGSRGPEGSRGLPGMEGPRGAPGPRGLQGEQGAPGLP 745
>Q58516:ASNH1_METJA Putative asparagine synthetase [glutamine-hydrolyzing] 1 -| Methanococcus jannaschii Length = 541 Score = 33.9 bits (76), Expect = 1.2 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +1 Query: 469 LSQLAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADGCVAFSDD 609 L +L G YAF ++DKS + + +A D G PLF+ + D AF+ + Sbjct: 129 LEELDGDYAFAIYDKSKNVVRLARDMFGVKPLFY-VDRDKYFAFASE 174
>O82660:P2SAF_ARATH Photosystem II stability/assembly factor HCF136, chloroplast| precursor - Arabidopsis thaliana (Mouse-ear cress) Length = 403 Score = 33.5 bits (75), Expect = 1.6 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 684 WRPQ---VVRESQEQGDRCACR*GGNLWCNLHGGRIYRSRGTSVGDSLVSVAGQSR 842 W+P V R Q G R G LW + GG +Y S+GT + + V QSR Sbjct: 280 WQPHNRAVARRIQNMGWRA----DGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSR 331
>Q3SRZ8:KSGA_NITWN Dimethyladenosine transferase - Nitrobacter winogradskyi (strain| Nb-255 / ATCC 25391) Length = 287 Score = 33.5 bits (75), Expect = 1.6 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Frame = -1 Query: 359 PKLSRTPSNRQKISSFAAKDLGRRRDSLTWE*ARLPSDPSS-TDTAGSAPARKRFTSSD- 186 P+ + P +R+ + AA G RR L LP+DP+S AG P R+ T S Sbjct: 209 PRYNPEPCDRRSLEQVAAAAFGHRRKMLRQSLKSLPADPASLAAAAGIDPTRRAETVSIS 268 Query: 185 ---------ARVLGDGVRL 156 A ++G G RL Sbjct: 269 GFAAMARELASIVGSGKRL 287
>O00763:COA2_HUMAN Acetyl-CoA carboxylase 2 - Homo sapiens (Human)| Length = 2458 Score = 33.5 bits (75), Expect = 1.6 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = -1 Query: 353 LSRTPSNRQKISSFAAKDLGRRRDSLTWE*ARLPSDPSSTDTAGSAP 213 L +TPS + S KD GRRR+SL + P +P S+ A +P Sbjct: 67 LPKTPSQAEPASHKGPKDAGRRRNSLPPSHQKPPRNPLSSSDAAPSP 113
>P32017:CO9A3_CHICK Collagen alpha-3(IX) chain precursor - Gallus gallus (Chicken)| Length = 675 Score = 33.1 bits (74), Expect = 2.1 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEG 440 GSPG++G A P+ P G PGDRGL G Sbjct: 348 GSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRG 381
>Q02388:CO7A1_HUMAN Collagen alpha-1(VII) chain precursor - Homo sapiens (Human)| Length = 2944 Score = 33.1 bits (74), Expect = 2.1 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 333 VRGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 + G PG+ G A RP + +RG G+RG Q +G LP Sbjct: 2041 IPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLP 2081
>P12105:CO3A1_CHICK Collagen alpha-1(III) chain precursor - Gallus gallus (Chicken)| Length = 1262 Score = 33.1 bits (74), Expect = 2.1 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 G PG G PA P RG PG+RG Q G P Sbjct: 773 GPPGDKGETGPAGAPGPAGSRGGPGERGEQGLPGPAGFP 811
>P49089:ASNS1_YEAST Asparagine synthetase [glutamine-hydrolyzing] 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 572 Score = 33.1 bits (74), Expect = 2.1 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Frame = +1 Query: 478 LAGSYAFVLFDKSTSSLFVASDPEGKVPLFWGITADG--CVAFSDDIDLLKGSCGKSLAP 651 L G +A+ L+D + A DP G L+ G ++ V F+ ++ L C ++ Sbjct: 116 LDGMFAWTLYDAKQDRIVAARDPIGITTLYMGRSSASPKTVYFASELKCLTDDC-DTITA 174 Query: 652 FPQGCFYWNALGGLKSYENP----KNKVTAVPAD 741 FP G Y + + Y P + ++ + P D Sbjct: 175 FPPGHVYDSKTDKITRYFTPDWLDEKRIPSTPID 208
>Q63870:CO7A1_MOUSE Collagen alpha-1(VII) chain precursor - Mus musculus (Mouse)| Length = 2944 Score = 32.7 bits (73), Expect = 2.7 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 333 VRGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 + G PG+ G + A RP + +RG G+RG Q +G LP Sbjct: 2035 IPGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLP 2075
>Q05722:CO9A1_MOUSE Collagen alpha-1(IX) chain precursor - Mus musculus (Mouse)| Length = 921 Score = 32.3 bits (72), Expect = 3.6 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = +3 Query: 339 GSPGQLGAAEP-AVRPLQGQQ--RGAPGDRGLQDAEGQGSLP 455 G+PG+ G P +R L G + RG PG RG+Q +G LP Sbjct: 706 GNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGEQGATGLP 747
>Q01955:CO4A3_HUMAN Collagen alpha-3(IV) chain precursor - Homo sapiens (Human)| Length = 1670 Score = 32.3 bits (72), Expect = 3.6 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQ--GQQRGAPGDRGLQDAEGQGSLP 455 +G+ G+ G P+ P + G ++GAPGD GLQ G+ +P Sbjct: 264 KGAMGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVP 305 Score = 26.6 bits (57), Expect(2) = 7.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 G PG LG P +P + + G PG G + +G P Sbjct: 1379 GPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEP 1417 Score = 23.1 bits (48), Expect(2) = 7.7 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = +1 Query: 502 LFDKSTSSLFVASDPEGKVPLFWGIT 579 +F + + + + S PEG VPL+ G + Sbjct: 1447 VFTRHSQTTAIPSCPEGTVPLYSGFS 1472
>P20850:CO9A1_RAT Collagen alpha-1(IX) chain - Rattus norvegicus (Rat)| Length = 325 Score = 32.0 bits (71), Expect = 4.7 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = +3 Query: 339 GSPGQLGAAEP-AVRPLQGQQ--RGAPGDRGLQDAEGQGSLP 455 G+PG+ G P +R L G + RG PG RG+Q +G LP Sbjct: 110 GNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQGATGLP 151
>O88942:NFAC1_MOUSE Nuclear factor of activated T-cells, cytoplasmic 1 - Mus musculus| (Mouse) Length = 717 Score = 31.6 bits (70), Expect = 6.1 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Frame = -1 Query: 782 DPSTMKVAPQISSSSAGTAVTLF-LGFSYDLRPPRAFQ*KQPCGKGASDLPQDPFSRSMS 606 DPS + A +SS S + + + +SY P+ + PC + P++ F RS+ Sbjct: 169 DPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRSLG 228 Query: 605 S---------EKATQPSAVIPQKSGTLPSGSDAT 531 + +T P A I ++S GS T Sbjct: 229 ACHLLGSPRHSPSTSPRASITEESWLGARGSRPT 262
>Q29042:FCN1_PIG Ficolin-1 precursor - Sus scrofa (Pig)| Length = 326 Score = 31.6 bits (70), Expect = 6.1 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLPRQL 464 RGSPG +G A PA G GDRG + A G+ P QL Sbjct: 75 RGSPGVVGKAGPA---------GPKGDRGEKGARGEKGEPGQL 108
>Q61245:COBA1_MOUSE Collagen alpha-1(XI) chain precursor - Mus musculus (Mouse)| Length = 1804 Score = 31.6 bits (70), Expect = 6.1 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 +G PG +G P + RG PG +G A+G G +P Sbjct: 1450 KGHPGLIGLIGPPGEQGEKGDRGLPGSQGSPGAKGDGGIP 1489
>O93484:CO1A2_ONCMY Collagen alpha-2(I) chain precursor - Oncorhynchus mykiss (Rainbow| trout) (Salmo gairdneri) Length = 1356 Score = 31.6 bits (70), Expect = 6.1 Identities = 19/37 (51%), Positives = 23/37 (62%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQG 446 RGS G++GA PA L+G RG G RGL EG+G Sbjct: 375 RGSTGEVGATGPA--GLRGA-RGGAGTRGLPGLEGRG 408
>P02465:CO1A2_BOVIN Collagen alpha-2(I) chain precursor - Bos taurus (Bovine)| Length = 1364 Score = 31.6 bits (70), Expect = 6.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSL 452 RGS G++G A P P RG PG RGL A+G+ + Sbjct: 379 RGSTGEIGPAGPPGPP---GLRGNPGSRGLPGADGRAGV 414
>P11087:CO1A1_MOUSE Collagen alpha-1(I) chain precursor - Mus musculus (Mouse)| Length = 1453 Score = 31.6 bits (70), Expect = 6.1 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRG 422 G+PG G A P+ P RGAPGDRG Sbjct: 765 GAPGDKGEAGPSGPPGPTGARGAPGDRG 792
>P20909:COBA1_RAT Collagen alpha-1(XI) chain precursor - Rattus norvegicus (Rat)| Length = 482 Score = 31.2 bits (69), Expect = 8.0 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 +G PG +G P + RG PG +G A+G G +P Sbjct: 128 KGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 167
>P12107:COBA1_HUMAN Collagen alpha-1(XI) chain precursor - Homo sapiens (Human)| Length = 1806 Score = 31.2 bits (69), Expect = 8.0 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 +G PG +G P + RG PG +G A+G G +P Sbjct: 1452 KGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIP 1491
>P08125:COAA1_CHICK Collagen alpha-1(X) chain precursor - Gallus gallus (Chicken)| Length = 674 Score = 31.2 bits (69), Expect = 8.0 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Frame = +3 Query: 336 RGSPGQLGAAEPAVRPLQGQQR-------GAPGDRGLQDAEGQGSLP 455 RG PG+ G EP V + GQ+ G PG+RGL +G LP Sbjct: 163 RGPPGEKG--EPGVPGINGQKGEMGFGVPGRPGNRGLPGPQGPQGLP 207
>P27393:CO4A2_ASCSU Collagen alpha-2(IV) chain precursor - Ascaris suum (Pig roundworm)| (Ascaris lumbricoides) Length = 1763 Score = 31.2 bits (69), Expect = 8.0 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEGQGSLP 455 G PG+ G PA R + + G PG GL+ +G LP Sbjct: 1020 GLPGEKGEPGPAARDGEKGEPGLPGQPGLRGPQGPPGLP 1058
>P08121:CO3A1_MOUSE Collagen alpha-1(III) chain precursor - Mus musculus (Mouse)| Length = 1464 Score = 31.2 bits (69), Expect = 8.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 339 GSPGQLGAAEPAVRPLQGQQRGAPGDRGLQDAEG 440 G PG LG A PA + + + G PG+RGL G Sbjct: 215 GPPGALGPAGPAGKDGESGRPGRPGERGLPGPPG 248 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 154,319,781 Number of extensions: 2919600 Number of successful extensions: 10649 Number of sequences better than 10.0: 49 Number of HSP's gapped: 10585 Number of HSP's successfully gapped: 51 Length of query: 368 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 253 Effective length of database: 69,142,514 Effective search space: 17493056042 Effective search space used: 17493056042 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
