ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62j05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059750.1| Oryza sativa (japonica cultivar-group) Os04g0498800 (Os04g0498800) mRNA, complete cds Length = 2030 Score = 799 bits (403), Expect = 0.0 Identities = 873/1029 (84%), Gaps = 3/1029 (0%) Strand = Plus / Plus Query: 791 cagggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattga 850 |||||||||||| || || ||||| || | ||||| || ||||||||||||||||| || Sbjct: 717 cagggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagataga 776 Query: 851 ggtcactgttcctacgttagaagaaaggctgcagattcttaagctttattccaagaatct 910 ||| ||||||||||| |||||||||| | ||||||||||||||||| |||||||||| Sbjct: 777 ggttactgttcctacagcagaagaaaggttcgagattcttaagctttataccaagaatct 836 Query: 911 gcatcttgatgaaagtgttgatcttcaaattattgctggatggtgcaatggttatgttgg 970 ||||||| |||| |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 837 acatcttggtgaatgtgttgatcttcaatctgttgctgcatcctgcaatggttatgttgg 896 Query: 971 ggctgatctagaagctctatgtcgagaagctgccagacttgcttaccgtagattgtcaaa 1030 |||||| || ||||| |||||||||||||||| |||| |||||| ||||||| |||| Sbjct: 897 agctgatttacaagctttatgtcgagaagctgcaagacgtgcttatggtagattatcaag 956 Query: 1031 ctcatccgaggatgggaaggtgctcacactactcatggaagattgggagtctgctagatc 1090 |||||| ||| || ||| ||||| || ||| ||||||| |||||||||||||||| ||| Sbjct: 957 ctcatcagagagtgagaatgtgctaacgctaatcatggaggattgggagtctgctaaatc 1016 Query: 1091 tcaggtcaaagcaagcatgataagaggggtaactaaagaagctccaactgtttcatggga 1150 | || |||| || ||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 1017 tgtggccaaaaatagtgtgacaagaggggtaactaaagaaattccagctgtttcatggga 1076 Query: 1151 tgatataggaggtttgaaagatctgaagaaaaagctccagcaagctgttgagtggcccat 1210 |||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||| Sbjct: 1077 tgatataggaggtttgaaagctgttaagaaaaaacttcagcaagctgttgaatggcccat 1136 Query: 1211 caagcatgctgctgcatttgcaagactggggatatcaccagttcgtggtgtgcttttgca 1270 ||||||||||||| |||||| ||||| || |||||||| | ||||| ||||| ||||| Sbjct: 1137 caagcatgctgcttcatttgatagacttggaatatcacctatccgtggggtgctattgca 1196 Query: 1271 tggtcctccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaagc 1330 |||||| ||||||||||||||||| |||||||| |||||||| || ||||| |||||||| Sbjct: 1197 tggtccaccagggtgctcaaagactacccttgcaaaggctgctgctcatgctgcccaagc 1256 Query: 1331 ttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaagc 1390 |||||||||||| || |||||||| || ||||||| ||||||||||| ||||||||||| Sbjct: 1257 ttctttcttttcattaagtggtgctgagttatactccaagtatgttggtgaaggtgaagc 1316 Query: 1391 tttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatattttttga 1450 |||||||||| | ||||| |||| |||| | || ||||||||||||||||||||||||| Sbjct: 1317 tttgttgcgacgtacattccagatggcacgtcttgcttctccaagcattatattttttga 1376 Query: 1451 tgaggctgatgcaattgctcctaaaagaaccggtcctagtggggac---actggcaatgc 1507 |||||||||||||||||| ||||||||||| ||||| || ||| || | ||||||||| Sbjct: 1377 tgaggctgatgcaattgcccctaaaagaactggtcccagcgggaactctagtggcaatgc 1436 Query: 1508 cacggtaggagaaagactcctatcaactttgttgactgaaatggatggtttagaactggc 1567 |||||| |||||||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1437 cacggttggagaaagactcttatcaactctattgacggaaatggatggtttagaactggc 1496 Query: 1568 tacggggattattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttct 1627 |||||| |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 1497 tacgggaattattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttct 1556 Query: 1628 ccgcccagggcgctttgatatggtgttgtacgttccaccgccagatgcacaaggaaggca 1687 ||||||||||| || |||||||| ||||| |||||||| |||||||| |||| | | Sbjct: 1557 gcgcccagggcgtttcgatatggttttgtatgttccaccaccagatgcggaaggtcgata 1616 Query: 1688 agagatattacgcatccatacacggaagatgaagctgggggaggatgtggacgttgggga 1747 || ||| |||||||||||||||| || ||| | || || |||||||| || || | Sbjct: 1617 tgaaatactacgcatccatacacgcaaaatgccattaggagatgatgtggatctttggaa 1676 Query: 1748 gatagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaagc 1807 | |||| ||||| |||||||| ||||| || || ||||| ||||||||||||||||| || Sbjct: 1677 ggtagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtgcagggaggc 1736 Query: 1808 aggaatggc 1816 |||||||| Sbjct: 1737 gggaatggc 1745 Score = 220 bits (111), Expect = 2e-53 Identities = 303/367 (82%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 299 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 358 Query: 427 ggcttaagtggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcc 486 | || || | |||||||||||||||||| |||||||| ||||||| ||||||| |||| Sbjct: 359 gcctcaattttcccagaggattgctgctccacggcccctctggcactggaaagaaaagca 418 Query: 487 tggttcaagccatggttcgagaatgcaatgcccatctgacaatgatcaacccgtattctg 546 |||| | ||| | ||||||||||| |||||||| || ||| |||| | | ||||| Sbjct: 419 tggtccgagctgttgttcgagaatgtaatgcccacctcacagtgattgattcaatttctg 478 Query: 547 tccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctgaatcct 606 | |||||| | || ||||||||||| ||||||||| |||| || ||||| ||||| | | Sbjct: 479 tgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactgaagcat 538 Query: 607 actcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgctatat 666 | |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| |||| Sbjct: 539 attcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatgacatat 598 Query: 667 gtccacgccgtaacagtaggagagagcaagagtcccgcattgttggtcagctgctaactc 726 |||||| ||| ||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 599 gtccaccgcgtggcagtaggagagagcaagggtcccgcattgttggtcagctgttgactc 658 Query: 727 tgatgga 733 ||||||| Sbjct: 659 tgatgga 665
>dbj|AK099259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D09, full insert sequence Length = 2034 Score = 791 bits (399), Expect = 0.0 Identities = 872/1029 (84%), Gaps = 3/1029 (0%) Strand = Plus / Plus Query: 791 cagggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattga 850 |||||||||||| || || ||||| || | ||||| || ||||||||||||||||| || Sbjct: 720 cagggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagataga 779 Query: 851 ggtcactgttcctacgttagaagaaaggctgcagattcttaagctttattccaagaatct 910 ||| ||||||||||| |||||||||| | ||||||||||||||||| |||||||||| Sbjct: 780 ggttactgttcctacagcagaagaaaggttcgagattcttaagctttataccaagaatct 839 Query: 911 gcatcttgatgaaagtgttgatcttcaaattattgctggatggtgcaatggttatgttgg 970 ||||||| |||| |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 840 acatcttggtgaatgtgttgatcttcaatctgttgctgcatcctgcaatggttatgttgg 899 Query: 971 ggctgatctagaagctctatgtcgagaagctgccagacttgcttaccgtagattgtcaaa 1030 |||||| || ||||| |||||||||||||||| |||| |||||| ||||||| |||| Sbjct: 900 agctgatttacaagctttatgtcgagaagctgcaagacgtgcttatggtagattatcaag 959 Query: 1031 ctcatccgaggatgggaaggtgctcacactactcatggaagattgggagtctgctagatc 1090 |||||| ||| || ||| ||||| || ||| ||||||| |||||||||||||||| ||| Sbjct: 960 ctcatcagagagtgagaatgtgctaacgctaatcatggaggattgggagtctgctaaatc 1019 Query: 1091 tcaggtcaaagcaagcatgataagaggggtaactaaagaagctccaactgtttcatggga 1150 | || |||| || ||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 1020 tgtggccaaaaatagtgtgacaagaggggtaactaaagaaattccagctgtttcatggga 1079 Query: 1151 tgatataggaggtttgaaagatctgaagaaaaagctccagcaagctgttgagtggcccat 1210 |||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||| Sbjct: 1080 tgatataggaggtttgaaagctgttaagaaaaaacttcagcaagctgttgaatggcccat 1139 Query: 1211 caagcatgctgctgcatttgcaagactggggatatcaccagttcgtggtgtgcttttgca 1270 ||||||||||||| |||||| ||||| || |||||||| | ||||| ||||| ||||| Sbjct: 1140 caagcatgctgcttcatttgatagacttggaatatcacctatccgtggggtgctattgca 1199 Query: 1271 tggtcctccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaagc 1330 |||||| ||||||||||||||||| |||||||| |||||||| || ||||| |||||||| Sbjct: 1200 tggtccaccagggtgctcaaagactacccttgcaaaggctgctgctcatgctgcccaagc 1259 Query: 1331 ttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaagc 1390 |||||||||||| || |||||||| || ||||||| ||||||||||| ||||||||||| Sbjct: 1260 ttctttcttttcattaagtggtgctgagttatactccaagtatgttggtgaaggtgaagc 1319 Query: 1391 tttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatattttttga 1450 |||||||||| | ||||| |||| |||| | || ||||||||||||||||||||||||| Sbjct: 1320 tttgttgcgacgtacattccagatggcacgtcttgcttctccaagcattatattttttga 1379 Query: 1451 tgaggctgatgcaattgctcctaaaagaaccggtcctagtggggac---actggcaatgc 1507 |||||||||||||||||| ||||||||||| ||||| || ||| || | ||||||||| Sbjct: 1380 tgaggctgatgcaattgcccctaaaagaactggtcccagcgggaactctagtggcaatgc 1439 Query: 1508 cacggtaggagaaagactcctatcaactttgttgactgaaatggatggtttagaactggc 1567 |||||| |||||||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1440 cacggttggagaaagactcttatcaactctattgacggaaatggatggtttagaactggc 1499 Query: 1568 tacggggattattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttct 1627 |||||| |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 1500 tacgggaattattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttct 1559 Query: 1628 ccgcccagggcgctttgatatggtgttgtacgttccaccgccagatgcacaaggaaggca 1687 ||||||||||| || |||||||| ||||| |||||||| |||||||| |||| | | Sbjct: 1560 gcgcccagggcgtttcgatatggttttgtatgttccaccaccagatgcggaaggtcgata 1619 Query: 1688 agagatattacgcatccatacacggaagatgaagctgggggaggatgtggacgttgggga 1747 || ||| |||||||||||||||| || ||| | || || |||||||| || || | Sbjct: 1620 tgaaatactacgcatccatacacgcaaaatgccattaggagatgatgtggatctttggaa 1679 Query: 1748 gatagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaagc 1807 | |||| ||||| |||||||| ||||| || || ||||| |||||||||| |||||| || Sbjct: 1680 ggtagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtccagggaggc 1739 Query: 1808 aggaatggc 1816 |||||||| Sbjct: 1740 gggaatggc 1748 Score = 220 bits (111), Expect = 2e-53 Identities = 303/367 (82%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 302 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 361 Query: 427 ggcttaagtggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcc 486 | || || | |||||||||||||||||| |||||||| ||||||| ||||||| |||| Sbjct: 362 gcctcaattttcccagaggattgctgctccacggcccctctggcactggaaagaaaagca 421 Query: 487 tggttcaagccatggttcgagaatgcaatgcccatctgacaatgatcaacccgtattctg 546 |||| | ||| | ||||||||||| |||||||| || ||| |||| | | ||||| Sbjct: 422 tggtccgagctgttgttcgagaatgtaatgcccacctcacagtgattgattcaatttctg 481 Query: 547 tccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctgaatcct 606 | |||||| | || ||||||||||| ||||||||| |||| || ||||| ||||| | | Sbjct: 482 tgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactgaagcat 541 Query: 607 actcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgctatat 666 | |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| |||| Sbjct: 542 attcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatgacatat 601 Query: 667 gtccacgccgtaacagtaggagagagcaagagtcccgcattgttggtcagctgctaactc 726 |||||| ||| ||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 602 gtccaccgcgtggcagtaggagagagcaagggtcccgcattgttggtcagctgttgactc 661 Query: 727 tgatgga 733 ||||||| Sbjct: 662 tgatgga 668
>dbj|AK069052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B08, full insert sequence Length = 2034 Score = 791 bits (399), Expect = 0.0 Identities = 872/1029 (84%), Gaps = 3/1029 (0%) Strand = Plus / Plus Query: 791 cagggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattga 850 |||||||||||| || || ||||| || | ||||| || ||||||||||||||||| || Sbjct: 720 cagggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagataga 779 Query: 851 ggtcactgttcctacgttagaagaaaggctgcagattcttaagctttattccaagaatct 910 ||| ||||||||||| |||||||||| | ||||||||||||||||| |||||||||| Sbjct: 780 ggttactgttcctacagcagaagaaaggttcgagattcttaagctttataccaagaatct 839 Query: 911 gcatcttgatgaaagtgttgatcttcaaattattgctggatggtgcaatggttatgttgg 970 ||||||| |||| |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 840 acatcttggtgaatgtgttgatcttcaatctgttgctgcatcctgcaatggttatgttgg 899 Query: 971 ggctgatctagaagctctatgtcgagaagctgccagacttgcttaccgtagattgtcaaa 1030 |||||| || ||||| |||||||||||||||| |||| |||||| ||||||| |||| Sbjct: 900 agctgatttacaagctttatgtcgagaagctgcaagacgtgcttatggtagattatcaag 959 Query: 1031 ctcatccgaggatgggaaggtgctcacactactcatggaagattgggagtctgctagatc 1090 |||||| ||| || ||| ||||| || ||| ||||||| |||||||||||||||| ||| Sbjct: 960 ctcatcagagagtgagaatgtgctaacgctaatcatggaggattgggagtctgctaaatc 1019 Query: 1091 tcaggtcaaagcaagcatgataagaggggtaactaaagaagctccaactgtttcatggga 1150 | || |||| || ||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 1020 tgtggccaaaaatagtgtgacaagaggggtaactaaagaaattccagctgtttcatggga 1079 Query: 1151 tgatataggaggtttgaaagatctgaagaaaaagctccagcaagctgttgagtggcccat 1210 |||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||| Sbjct: 1080 tgatataggaggtttgaaagctgttaagaaaaaacttcagcaagctgttgaatggcccat 1139 Query: 1211 caagcatgctgctgcatttgcaagactggggatatcaccagttcgtggtgtgcttttgca 1270 ||||||||||||| |||||| ||||| || |||||||| | ||||| ||||| ||||| Sbjct: 1140 caagcatgctgcttcatttgatagacttggaatatcacctatccgtggggtgctattgca 1199 Query: 1271 tggtcctccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaagc 1330 |||||| ||||||||||||||||| |||||||| |||||||| || ||||| |||||||| Sbjct: 1200 tggtccaccagggtgctcaaagactacccttgcaaaggctgctgctcatgctgcccaagc 1259 Query: 1331 ttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaagc 1390 |||||||||||| || |||||||| || ||||||| ||||||||||| ||||||||||| Sbjct: 1260 ttctttcttttcattaagtggtgctgagttatactccaagtatgttggtgaaggtgaagc 1319 Query: 1391 tttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatattttttga 1450 |||||||||| | ||||| |||| |||| | || ||||||||||||||||||||||||| Sbjct: 1320 tttgttgcgacgtacattccagatggcacgtcttgcttctccaagcattatattttttga 1379 Query: 1451 tgaggctgatgcaattgctcctaaaagaaccggtcctagtggggac---actggcaatgc 1507 |||||||||||||||||| ||||||||||| ||||| || ||| || | ||||||||| Sbjct: 1380 tgaggctgatgcaattgcccctaaaagaactggtcccagcgggaactctagtggcaatgc 1439 Query: 1508 cacggtaggagaaagactcctatcaactttgttgactgaaatggatggtttagaactggc 1567 |||||| |||||||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1440 cacggttggagaaagactcttatcaactctattgacggaaatggatggtttagaactggc 1499 Query: 1568 tacggggattattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttct 1627 |||||| |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 1500 tacgggaattattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttct 1559 Query: 1628 ccgcccagggcgctttgatatggtgttgtacgttccaccgccagatgcacaaggaaggca 1687 ||||||||||| || |||||||| ||||| |||||||| |||||||| |||| | | Sbjct: 1560 gcgcccagggcgtttcgatatggttttgtatgttccaccaccagatgcggaaggtcgata 1619 Query: 1688 agagatattacgcatccatacacggaagatgaagctgggggaggatgtggacgttgggga 1747 || ||| |||||||||||||||| || ||| | || || |||||||| || || | Sbjct: 1620 tgaaatactacgcatccatacacgcaaaatgccattaggagatgatgtggatctttggaa 1679 Query: 1748 gatagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaagc 1807 | |||| ||||| |||||||| ||||| || || ||||| |||||||||| |||||| || Sbjct: 1680 ggtagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtccagggaggc 1739 Query: 1808 aggaatggc 1816 |||||||| Sbjct: 1740 gggaatggc 1748 Score = 220 bits (111), Expect = 2e-53 Identities = 303/367 (82%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 302 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 361 Query: 427 ggcttaagtggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcc 486 | || || | |||||||||||||||||| |||||||| ||||||| ||||||| |||| Sbjct: 362 gcctcaattttcccagaggattgctgctccacggcccctctggcactggaaagaaaagca 421 Query: 487 tggttcaagccatggttcgagaatgcaatgcccatctgacaatgatcaacccgtattctg 546 |||| | ||| | ||||||||||| |||||||| || ||| |||| | | ||||| Sbjct: 422 tggtccgagctgttgttcgagaatgtaatgcccacctcacagtgattgattcaatttctg 481 Query: 547 tccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctgaatcct 606 | |||||| | || ||||||||||| ||||||||| |||| || ||||| ||||| | | Sbjct: 482 tgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactgaagcat 541 Query: 607 actcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgctatat 666 | |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| |||| Sbjct: 542 attcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatgacatat 601 Query: 667 gtccacgccgtaacagtaggagagagcaagagtcccgcattgttggtcagctgctaactc 726 |||||| ||| ||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 602 gtccaccgcgtggcagtaggagagagcaagggtcccgcattgttggtcagctgttgactc 661 Query: 727 tgatgga 733 ||||||| Sbjct: 662 tgatgga 668
>dbj|AK099085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D02, full insert sequence Length = 2035 Score = 777 bits (392), Expect = 0.0 Identities = 872/1030 (84%), Gaps = 4/1030 (0%) Strand = Plus / Plus Query: 791 cagggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattga 850 |||||||||||| || || ||||| || | ||||| || ||||||||||||||||| || Sbjct: 720 cagggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagataga 779 Query: 851 ggtcactgttcctacgttagaagaaaggctgcagattcttaagctttattccaagaatct 910 ||| ||||||||||| |||||||||| | ||||||||||||||||| |||||||||| Sbjct: 780 ggttactgttcctacagcagaagaaaggttcgagattcttaagctttataccaagaatct 839 Query: 911 gcatcttgatgaaagtgttgatcttcaaattattgctggatggtgcaatggttatgttgg 970 ||||||| |||| |||||||||||||| | |||||| || ||||||||||||||||| Sbjct: 840 acatcttggtgaatgtgttgatcttcaatctgttgctgcatcctgcaatggttatgttgg 899 Query: 971 ggctgatctagaagctctatgtcgagaagctgccagacttgcttaccgtagattgtcaaa 1030 |||||| || ||||| |||||||||||||||| |||| |||||| ||||||| |||| Sbjct: 900 agctgatttacaagctttatgtcgagaagctgcaagacgtgcttatggtagattatcaag 959 Query: 1031 ctcatccgaggatgggaaggtgctcacactactcatggaagattgggagtctgctagatc 1090 |||||| ||| || ||| ||||| || ||| ||||||| |||||||||||||||| ||| Sbjct: 960 ctcatcagagagtgagaatgtgctaacgctaatcatggaggattgggagtctgctaaatc 1019 Query: 1091 tcaggtcaaagcaagcatgataagaggggtaactaaagaagctccaactgtttcatggga 1150 | || |||| || ||| ||||||||||||||||||| |||| ||||||||||||| Sbjct: 1020 tgtggccaaaaatagtgtgacaagaggggtaactaaagaaattccagctgtttcatggga 1079 Query: 1151 tgatataggaggtttgaaagatctgaagaaaaagctccagcaagctgttgagtggcccat 1210 |||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||| Sbjct: 1080 tgatataggaggtttgaaagctgttaagaaaaaacttcagcaagctgttgaatggcccat 1139 Query: 1211 caagcatgctgctgcatttgcaagactggggatatcaccagttcgtggtgtgcttttgca 1270 ||||||||||||| |||||| ||||| || |||||||| | ||||| ||||| ||||| Sbjct: 1140 caagcatgctgcttcatttgatagacttggaatatcacctatccgtggggtgctattgca 1199 Query: 1271 tggtcctccagggtgctcaaagaccacccttgccaa-ggctgcagcacatgcagcccaag 1329 |||||| ||||||||||||||||| |||||||| || |||||| || ||||| ||||||| Sbjct: 1200 tggtccaccagggtgctcaaagactacccttgcaaagggctgctgctcatgctgcccaag 1259 Query: 1330 cttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaag 1389 ||||||||||||| || |||||||| || ||||||| ||||||||||| |||||||||| Sbjct: 1260 cttctttcttttcattaagtggtgctgagttatactccaagtatgttggtgaaggtgaag 1319 Query: 1390 ctttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatattttttg 1449 ||||||||||| | ||||| |||| |||| | || |||||||||||||||||||||||| Sbjct: 1320 ctttgttgcgacgtacattccagatggcacgtcttgcttctccaagcattatattttttg 1379 Query: 1450 atgaggctgatgcaattgctcctaaaagaaccggtcctagtggggac---actggcaatg 1506 ||||||||||||||||||| ||||||||||| ||||| || ||| || | |||||||| Sbjct: 1380 atgaggctgatgcaattgcccctaaaagaactggtcccagcgggaactctagtggcaatg 1439 Query: 1507 ccacggtaggagaaagactcctatcaactttgttgactgaaatggatggtttagaactgg 1566 ||||||| |||||||||||| |||||||| | ||||| |||||||||||||||||||||| Sbjct: 1440 ccacggttggagaaagactcttatcaactctattgacggaaatggatggtttagaactgg 1499 Query: 1567 ctacggggattattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttc 1626 ||||||| |||||||| ||||| |||||||| ||||| || ||||| ||||| ||||||| Sbjct: 1500 ctacgggaattattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttc 1559 Query: 1627 tccgcccagggcgctttgatatggtgttgtacgttccaccgccagatgcacaaggaaggc 1686 | ||||||||||| || |||||||| ||||| |||||||| |||||||| |||| | Sbjct: 1560 tgcgcccagggcgtttcgatatggttttgtatgttccaccaccagatgcggaaggtcgat 1619 Query: 1687 aagagatattacgcatccatacacggaagatgaagctgggggaggatgtggacgttgggg 1746 | || ||| |||||||||||||||| || ||| | || || |||||||| || || Sbjct: 1620 atgaaatactacgcatccatacacgcaaaatgccattaggagatgatgtggatctttgga 1679 Query: 1747 agatagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaag 1806 || |||| ||||| |||||||| ||||| || || ||||| |||||||||| |||||| | Sbjct: 1680 aggtagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtccagggagg 1739 Query: 1807 caggaatggc 1816 | |||||||| Sbjct: 1740 cgggaatggc 1749 Score = 220 bits (111), Expect = 2e-53 Identities = 303/367 (82%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 302 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 361 Query: 427 ggcttaagtggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcc 486 | || || | |||||||||||||||||| |||||||| ||||||| ||||||| |||| Sbjct: 362 gcctcaattttcccagaggattgctgctccacggcccctctggcactggaaagaaaagca 421 Query: 487 tggttcaagccatggttcgagaatgcaatgcccatctgacaatgatcaacccgtattctg 546 |||| | ||| | ||||||||||| |||||||| || ||| |||| | | ||||| Sbjct: 422 tggtccgagctgttgttcgagaatgtaatgcccacctcacagtgattgattcaatttctg 481 Query: 547 tccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctgaatcct 606 | |||||| | || ||||||||||| ||||||||| |||| || ||||| ||||| | | Sbjct: 482 tgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactgaagcat 541 Query: 607 actcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgctatat 666 | |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| |||| Sbjct: 542 attcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatgacatat 601 Query: 667 gtccacgccgtaacagtaggagagagcaagagtcccgcattgttggtcagctgctaactc 726 |||||| ||| ||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 602 gtccaccgcgtggcagtaggagagagcaagggtcccgcattgttggtcagctgttgactc 661 Query: 727 tgatgga 733 ||||||| Sbjct: 662 tgatgga 668
>ref|NM_001061915.1| Oryza sativa (japonica cultivar-group) Os05g0376200 (Os05g0376200) mRNA, complete cds Length = 1176 Score = 757 bits (382), Expect = 0.0 Identities = 762/888 (85%), Gaps = 3/888 (0%) Strand = Plus / Plus Query: 791 cagggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattga 850 |||||||||||| || || ||||| || | ||||| || ||||||||||||||||| || Sbjct: 54 cagggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagataga 113 Query: 851 ggtcactgttcctacgttagaagaaaggctgcagattcttaagctttattccaagaatct 910 ||| ||||||||||| |||||||||| | ||||||||||||||||| |||||||||| Sbjct: 114 ggttactgttcctacagcagaagaaaggttcgagattcttaagctttataccaagaatct 173 Query: 911 gcatcttgatgaaagtgttgatcttcaaattattgctggatggtgcaatggttatgttgg 970 ||||||| |||| |||||||||||||| | |||||| || |||||||||||| |||| Sbjct: 174 acatcttggtgaatgtgttgatcttcaatctgttgctgcatcctgcaatggttatcttgg 233 Query: 971 ggctgatctagaagctctatgtcgagaagctgccagacttgcttaccgtagattgtcaaa 1030 |||||| || ||||| |||||||||||||||| |||| |||||| ||||||| |||| Sbjct: 234 agctgatttacaagctttatgtcgagaagctgcaagacgtgcttatggtagattatcaag 293 Query: 1031 ctcatccgaggatgggaaggtgctcacactactcatggaagattgggagtctgctagatc 1090 |||||| ||| || ||| ||||| || ||| ||||||| |||||||||||||||| ||| Sbjct: 294 ctcatcagagagtgagaatgtgctaacgctaatcatggaggattgggagtctgctaaatc 353 Query: 1091 tcaggtcaaagcaagcatgataagaggggtaactaaagaagctccaactgtttcatggga 1150 | || |||| || ||| ||||||||||| ||||||| |||| ||||||||||||| Sbjct: 354 tgtggccaaaaatagtgtgacaagaggggtaattaaagaaattccagctgtttcatggga 413 Query: 1151 tgatataggaggtttgaaagatctgaagaaaaagctccagcaagctgttgagtggcccat 1210 |||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||| Sbjct: 414 tgatataggaggtttgaaagctgttaagaaaaaacttcagcaagctgttgaatggcccat 473 Query: 1211 caagcatgctgctgcatttgcaagactggggatatcaccagttcgtggtgtgcttttgca 1270 ||||||||||||| |||||| ||||| || |||||||| | ||||| ||||| ||||| Sbjct: 474 caagcatgctgcttcatttgatagacttggaatatcacctatccgtggggtgctattgca 533 Query: 1271 tggtcctccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaagc 1330 |||||| ||||||||||||||||| |||||||| |||||||| || ||||| |||||||| Sbjct: 534 tggtccaccagggtgctcaaagactacccttgcaaaggctgctgctcatgctgcccaagc 593 Query: 1331 ttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaagc 1390 |||||||||||| || |||||||| || ||||||| |||||||| || ||||||||||| Sbjct: 594 ttctttcttttcattaagtggtgctgagttatactccaagtatgtcggtgaaggtgaagc 653 Query: 1391 tttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatattttttga 1450 |||||||||| | ||||| |||| |||| | || ||||||||||||||||||||||||| Sbjct: 654 tttgttgcgacgtacattccagatggcacgtcttgcttctccaagcattatattttttga 713 Query: 1451 tgaggctgatgcaattgctcctaaaagaaccggtcctagtggggac---actggcaatgc 1507 |||||||||||||||||| ||||||||||| ||||| || ||| || | ||||||||| Sbjct: 714 tgaggctgatgcaattgcccctaaaagaactggtcccagcgggaactctagtggcaatgc 773 Query: 1508 cacggtaggagaaagactcctatcaactttgttgactgaaatggatggtttagaactggc 1567 |||||| |||||||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 774 cacggttggagaaagactcttatcaactctattgacggaaatggatggtttagaactggc 833 Query: 1568 tacggggattattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttct 1627 |||||| |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 834 tacgggaattattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttct 893 Query: 1628 ccgcccagggcgctttgatatggtgttgtacgttccaccgccagatgc 1675 ||||||||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 894 gcgcccagggcgttttgatatggttttgtatgttccaccaccagatgc 941
>gb|AY105173.1| Zea mays PCO079626 mRNA sequence Length = 1077 Score = 632 bits (319), Expect = e-177 Identities = 855/1033 (82%), Gaps = 3/1033 (0%) Strand = Plus / Plus Query: 798 gatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgaggtcact 857 |||||| | ||||| |||||||| ||| |||||||||||||||||||| | ||||| | Sbjct: 12 gatgccgttgatcctgcattgagaagggcaggacgttttgactcagaggtagaggttgcc 71 Query: 858 gttcctacgttagaagaaaggctgcagattcttaagctttattccaagaatctgcatctt 917 |||||||| | ||||||||||||| |||||||||||||||| |||| || || ||||| Sbjct: 72 gttcctacagttgaagaaaggctgctgattcttaagctttataccaaaaacctacatctg 131 Query: 918 gatgaaagtgttgatcttcaaattattgctggatggtgcaatggttatgttggggctgat 977 ||||||| || |||||||| | | |||||| | |||||||| |||||||| |||||| Sbjct: 132 gatgaaaaagtcgatcttcagactgttgctgcgttctgcaatggctatgttggagctgat 191 Query: 978 ctagaagctctatgtcgagaagctgccagacttgcttaccgtagattgtcaaactcatcc 1037 ||||||| | |||||||||||||||| ||||| || | |||| ||| ||||| || Sbjct: 192 ttagaagcattgtgtcgagaagctgccaagcttgcatatcatagaatgttaaacttatgt 251 Query: 1038 gaggatgggaaggtgctcacactactcatggaagattgggagtctgctagatctcaggtc 1097 |||| || || || || | |||||| |||||||| ||||| | |||||||||| ||| Sbjct: 252 gagggtgacaaagtacttaaactacttatggaagactgggaatgtgctagatctatggtg 311 Query: 1098 aaagcaagcatgataagaggggtaactaaagaagctccaactgtttcatgggatgatata 1157 | ||||||| | |||||||||||| |||||| | ||| |||||| |||||||||||| Sbjct: 312 ggaccaagcataacaagaggggtaaccaaagaaatttcaattgtttcgtgggatgatata 371 Query: 1158 ggaggtttgaaagatctgaagaaaaagctccagcaagctgttgagtggcccatcaagcat 1217 ||||| ||||||||||| |||||| |||| ||| ||| |||||| ||||||||||||||| Sbjct: 372 ggaggcttgaaagatctaaagaaagagcttcagaaagttgttgaatggcccatcaagcat 431 Query: 1218 gctgctgcatttgcaagactggggatatcaccagttcgtggtgtgcttttgcatggtcct 1277 |||||||||||| | ||||| || ||||||||||| || || ||||| |||||||| || Sbjct: 432 gctgctgcattttctagacttggaatatcaccagtccggggggtgctgttgcatggccca 491 Query: 1278 ccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaagcttctttc 1337 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 492 ccagggtgctccaagactactcttgccaaggctgcagcgcatgctgcccaagcttctttc 551 Query: 1338 ttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaagctttgttg 1397 |||||||||||||||||||| |||| || ||||||||||||||||| |||||| ||||| Sbjct: 552 ttttctttgagtggtgcagatttatattccaagtatgttggagaaggggaagctctgttg 611 Query: 1398 cgaagaacatttcagagggcaaggctatcttctccaagcattatattttttgatgaggct 1457 || ||||||||||||| || | || ||||||| |||||||||||||||||||||||| Sbjct: 612 cgtagaacatttcagaaagctcgtcttgcttctcccagcattatattttttgatgaggct 671 Query: 1458 gatgcaattgctcctaaaagaaccggtcctagtgggga---cactggcaatgccacggta 1514 ||||| ||||| || || ||||| || ||| ||||| | | |||||||||||| || Sbjct: 672 gatgccattgcccccaagagaactggccctggtgggaattctagtggcaatgccacagtc 731 Query: 1515 ggagaaagactcctatcaactttgttgactgaaatggatggtttagaactggctacgggg 1574 ||||||||||| | || ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 732 ggagaaagacttttgtcgactttattgaccgaaatggatggtttagaactggctacggga 791 Query: 1575 attattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttctccgccca 1634 ||||| || |||| ||||| || ||||| || ||||| ||||| |||||| | || ||| Sbjct: 792 attatcgtattgggtgctacgaatcgcccaaatgcaattgatgctgctcttttgcgtcca 851 Query: 1635 gggcgctttgatatggtgttgtacgttccaccgccagatgcacaaggaaggcaagagata 1694 ||||| || |||| |||| |||| || || || ||||||| |||| | || |||||| Sbjct: 852 gggcgtttcgataaggtgctgtatgtcccgccaccagatgtggaagggcgacacgagata 911 Query: 1695 ttacgcatccatacacggaagatgaagctgggggaggatgtggacgttggggagatagcg 1754 ||||||||||||||||||| |||||| |||| |||||||| || || || || | || Sbjct: 912 ctacgcatccatacacggaaaatgaagttgggagaggatgtagatctttggaaggttgca 971 Query: 1755 gagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaagcaggaatg 1814 ||| | |||||||| ||||| ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 972 gagtgtaccgagctattcaccggtgctgatcttgaaggcctttgcagggaagctggaatg 1031 Query: 1815 gcggcactgaggg 1827 || ||| |||||| Sbjct: 1032 gcagcattgaggg 1044
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 236 bits (119), Expect = 3e-58 Identities = 239/279 (85%) Strand = Plus / Plus Query: 892 agctttattccaagaatctgcatcttgatgaaagtgttgatcttcaaattattgctggat 951 |||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||| || Sbjct: 25395 agctttataccaagaatctacatcttggtgaatgtgttgatcttcaatctgttgctgcat 25454 Query: 952 ggtgcaatggttatgttggggctgatctagaagctctatgtcgagaagctgccagacttg 1011 ||||||||||||||||| |||||| || ||||| |||||||||||||||| |||| || Sbjct: 25455 cctgcaatggttatgttggagctgatttacaagctttatgtcgagaagctgcaagacatg 25514 Query: 1012 cttaccgtagattgtcaaactcatccgaggatgggaaggtgctcacactactcatggaag 1071 |||| |||||||||||| |||||| ||| || ||| ||||| || ||| ||||||| | Sbjct: 25515 cttatggtagattgtcaagctcatcagagagtgagaatgtgctaacgctaatcatggagg 25574 Query: 1072 attgggagtctgctagatctcaggtcaaagcaagcatgataagaggggtaactaaagaag 1131 ||||||||||||||| |||| || |||| || ||| ||||||||||||||||||| Sbjct: 25575 attgggagtctgctaaatctgtggccaaaaatagtgtgacaagaggggtaactaaagaaa 25634 Query: 1132 ctccaactgtttcatgggatgatataggaggtttgaaag 1170 |||||||||||||||||||||||||||||||||||||| Sbjct: 25635 ttccaactgtttcatgggatgatataggaggtttgaaag 25673 Score = 170 bits (86), Expect = 1e-38 Identities = 146/166 (87%) Strand = Plus / Plus Query: 1177 agaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaagac 1236 ||||||| || |||||||||||||| ||||||||||| ||||||||| |||||| |||| Sbjct: 25750 agaaaaaacttcagcaagctgttgaatggcccatcaaacatgctgcttcatttgatagac 25809 Query: 1237 tggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacca 1296 | || |||||||| | ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 25810 ttggaatatcacctatccgtggggtgctattgcatggtccaccagggtgctcaaagacta 25869 Query: 1297 cccttgccaaggctgcagcacatgcagcccaagcttctttcttttc 1342 ||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 25870 cccttgcaaaggctgctgctcatgctgcccaagcttctttcttttc 25915 Score = 149 bits (75), Expect = 5e-32 Identities = 117/131 (89%) Strand = Plus / Plus Query: 1347 agtggtgcagaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaaca 1406 |||||||| || ||||||| ||||||||||| ||||||||||||||||||||| | ||| Sbjct: 26277 agtggtgctgagttatactccaagtatgttggtgaaggtgaagctttgttgcgacgtaca 26336 Query: 1407 tttcagagggcaaggctatcttctccaagcattatattttttgatgaggctgatgcaatt 1466 || |||| |||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 26337 ttccagatggcacgtcttgcttctccaagcattatattttttgatgaggctgatgcaatt 26396 Query: 1467 gctcctaaaag 1477 || |||||||| Sbjct: 26397 gcccctaaaag 26407 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1499 tggcaatgccacggtaggagaaagactcctatcaactttgttgactgaaatggatggttt 1558 ||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 26788 tggcaatgccacggttggagaaagactcttatcaactctattgacggaaatggatggttt 26847 Query: 1559 agaactggctacgg 1572 |||||||||||||| Sbjct: 26848 agaactggctacgg 26861 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1575 attattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttctccgccca 1634 |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 26974 attattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttctgcgccca 27033 Query: 1635 gggcgctttgatatggt 1651 ||||| ||||||||||| Sbjct: 27034 gggcgttttgatatggt 27050 Score = 77.8 bits (39), Expect = 2e-10 Identities = 108/131 (82%) Strand = Plus / Plus Query: 542 ttctgtccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctga 601 |||||| |||||| | || ||||||||||| ||||||||| |||| || ||||| |||| Sbjct: 24632 ttctgtgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactga 24691 Query: 602 atcctactcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgc 661 | | || |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| Sbjct: 24692 agcatattcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatga 24751 Query: 662 tatatgtccac 672 |||||||||| Sbjct: 24752 catatgtccac 24762 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 684 aggagagagcaagagtcccgcattgttggtcagctgctaactctgatgga 733 ||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 24845 aggagagagcaagggtcccgcattgttggtcagctgttgactctgatgga 24894 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 438 cccagaggattgctgctctacggcccccctggcacaggaaag 479 |||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 24260 cccagaggattgctgctccacggcccctctggcactggaaag 24301 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1750 tagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcaggga 1804 |||| ||||| |||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 27226 tagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtgcaggga 27280 Score = 50.1 bits (25), Expect = 0.034 Identities = 52/61 (85%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 ||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 24087 aggctctccgggagctcgtgacgtatcctgtcctctacgcacgggaggcccgcgtgctcg 24146 Query: 427 g 427 | Sbjct: 24147 g 24147 Score = 44.1 bits (22), Expect = 2.1 Identities = 82/102 (80%) Strand = Plus / Plus Query: 792 agggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgag 851 ||||||||||| || || ||||| || | ||||| || |||||||||||| | || || Sbjct: 25133 agggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcaaaaataaag 25192 Query: 852 gtcactgttcctacgttagaagaaaggctgcagattcttaag 893 || ||||||||||| |||||||||| | ||||||||||| Sbjct: 25193 gttactgttcctacagcagaagaaaggttcgagattcttaag 25234
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 220 bits (111), Expect = 2e-53 Identities = 237/279 (84%) Strand = Plus / Plus Query: 892 agctttattccaagaatctgcatcttgatgaaagtgttgatcttcaaattattgctggat 951 |||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||| || Sbjct: 29546 agctttataccaagaatctacatcttggtgaatgtgttgatcttcaatctgttgctgcat 29605 Query: 952 ggtgcaatggttatgttggggctgatctagaagctctatgtcgagaagctgccagacttg 1011 ||||||||||||||||| |||||| || ||||| |||||||||||||||| |||| || Sbjct: 29606 cctgcaatggttatgttggagctgatttacaagctttatgtcgagaagctgcaagacgtg 29665 Query: 1012 cttaccgtagattgtcaaactcatccgaggatgggaaggtgctcacactactcatggaag 1071 |||| ||||||| |||| |||||| ||| || ||| ||||| || ||| ||||||| | Sbjct: 29666 cttatggtagattatcaagctcatcagagagtgagaatgtgctaacgctaatcatggagg 29725 Query: 1072 attgggagtctgctagatctcaggtcaaagcaagcatgataagaggggtaactaaagaag 1131 ||||||||||||||| |||| || |||| || ||| ||||||||||||||||||| Sbjct: 29726 attgggagtctgctaaatctgtggccaaaaatagtgtgacaagaggggtaactaaagaaa 29785 Query: 1132 ctccaactgtttcatgggatgatataggaggtttgaaag 1170 |||| ||||||||||||||||||||||||||||||||| Sbjct: 29786 ttccagctgtttcatgggatgatataggaggtttgaaag 29824 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 1177 agaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaagac 1236 ||||||| || |||||||||||||| ||||||||||||||||||||| |||||| |||| Sbjct: 29901 agaaaaaacttcagcaagctgttgaatggcccatcaagcatgctgcttcatttgatagac 29960 Query: 1237 tggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacca 1296 | || |||||||| | ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 29961 ttggaatatcacctatccgtggggtgctattgcatggtccaccagggtgctcaaagacta 30020 Query: 1297 cccttgccaaggctgcagcacatgcagcccaagcttctttcttttc 1342 ||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 30021 cccttgcaaaggctgctgctcatgctgcccaagcttctttcttttc 30066 Score = 149 bits (75), Expect = 5e-32 Identities = 117/131 (89%) Strand = Plus / Plus Query: 1347 agtggtgcagaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaaca 1406 |||||||| || ||||||| ||||||||||| ||||||||||||||||||||| | ||| Sbjct: 30429 agtggtgctgagttatactccaagtatgttggtgaaggtgaagctttgttgcgacgtaca 30488 Query: 1407 tttcagagggcaaggctatcttctccaagcattatattttttgatgaggctgatgcaatt 1466 || |||| |||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 30489 ttccagatggcacgtcttgcttctccaagcattatattttttgatgaggctgatgcaatt 30548 Query: 1467 gctcctaaaag 1477 || |||||||| Sbjct: 30549 gcccctaaaag 30559 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1499 tggcaatgccacggtaggagaaagactcctatcaactttgttgactgaaatggatggttt 1558 ||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 30941 tggcaatgccacggttggagaaagactcttatcaactctattgacggaaatggatggttt 31000 Query: 1559 agaactggctacgg 1572 |||||||||||||| Sbjct: 31001 agaactggctacgg 31014 Score = 77.8 bits (39), Expect = 2e-10 Identities = 108/131 (82%) Strand = Plus / Plus Query: 542 ttctgtccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctga 601 |||||| |||||| | || ||||||||||| ||||||||| |||| || ||||| |||| Sbjct: 28785 ttctgtgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactga 28844 Query: 602 atcctactcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgc 661 | | || |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| Sbjct: 28845 agcatattcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatga 28904 Query: 662 tatatgtccac 672 |||||||||| Sbjct: 28905 catatgtccac 28915 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 684 aggagagagcaagagtcccgcattgttggtcagctgctaactctgatgga 733 ||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 28995 aggagagagcaagggtcccgcattgttggtcagctgttgactctgatgga 29044 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 1575 attattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttctccgccca 1634 |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 31129 attattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttctgcgccca 31188 Query: 1635 gggcgctttgatatggt 1651 ||||| || |||||||| Sbjct: 31189 gggcgtttcgatatggt 31205 Score = 67.9 bits (34), Expect = 1e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 792 agggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgag 851 ||||||||||| || || ||||| || | ||||| || ||||||||||||||||| ||| Sbjct: 29283 agggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagatagag 29342 Query: 852 gtcactgttcctacgttagaagaaaggctgcagattcttaag 893 || ||||||||||| |||||||||| | ||||||||||| Sbjct: 29343 gttactgttcctacagcagaagaaaggttcgagattcttaag 29384 Score = 61.9 bits (31), Expect = 9e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1750 tagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaagcag 1809 |||| ||||| |||||||| ||||| || || ||||| ||||||||||||||||| || | Sbjct: 31379 tagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtgcagggaggcgg 31438 Query: 1810 gaatggc 1816 ||||||| Sbjct: 31439 gaatggc 31445 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 438 cccagaggattgctgctctacggcccccctggcacaggaaag 479 |||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 28412 cccagaggattgctgctccacggcccctctggcactggaaag 28453 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 28240 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 28299 Query: 427 g 427 | Sbjct: 28300 g 28300
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 220 bits (111), Expect = 2e-53 Identities = 237/279 (84%) Strand = Plus / Plus Query: 892 agctttattccaagaatctgcatcttgatgaaagtgttgatcttcaaattattgctggat 951 |||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||| || Sbjct: 24908961 agctttataccaagaatctacatcttggtgaatgtgttgatcttcaatctgttgctgcat 24909020 Query: 952 ggtgcaatggttatgttggggctgatctagaagctctatgtcgagaagctgccagacttg 1011 ||||||||||||||||| |||||| || ||||| |||||||||||||||| |||| || Sbjct: 24909021 cctgcaatggttatgttggagctgatttacaagctttatgtcgagaagctgcaagacgtg 24909080 Query: 1012 cttaccgtagattgtcaaactcatccgaggatgggaaggtgctcacactactcatggaag 1071 |||| ||||||| |||| |||||| ||| || ||| ||||| || ||| ||||||| | Sbjct: 24909081 cttatggtagattatcaagctcatcagagagtgagaatgtgctaacgctaatcatggagg 24909140 Query: 1072 attgggagtctgctagatctcaggtcaaagcaagcatgataagaggggtaactaaagaag 1131 ||||||||||||||| |||| || |||| || ||| ||||||||||||||||||| Sbjct: 24909141 attgggagtctgctaaatctgtggccaaaaatagtgtgacaagaggggtaactaaagaaa 24909200 Query: 1132 ctccaactgtttcatgggatgatataggaggtttgaaag 1170 |||| ||||||||||||||||||||||||||||||||| Sbjct: 24909201 ttccagctgtttcatgggatgatataggaggtttgaaag 24909239 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 1177 agaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaagac 1236 ||||||| || |||||||||||||| ||||||||||||||||||||| |||||| |||| Sbjct: 24909316 agaaaaaacttcagcaagctgttgaatggcccatcaagcatgctgcttcatttgatagac 24909375 Query: 1237 tggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacca 1296 | || |||||||| | ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 24909376 ttggaatatcacctatccgtggggtgctattgcatggtccaccagggtgctcaaagacta 24909435 Query: 1297 cccttgccaaggctgcagcacatgcagcccaagcttctttcttttc 1342 ||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 24909436 cccttgcaaaggctgctgctcatgctgcccaagcttctttcttttc 24909481 Score = 149 bits (75), Expect = 5e-32 Identities = 117/131 (89%) Strand = Plus / Plus Query: 1347 agtggtgcagaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaaca 1406 |||||||| || ||||||| ||||||||||| ||||||||||||||||||||| | ||| Sbjct: 24909844 agtggtgctgagttatactccaagtatgttggtgaaggtgaagctttgttgcgacgtaca 24909903 Query: 1407 tttcagagggcaaggctatcttctccaagcattatattttttgatgaggctgatgcaatt 1466 || |||| |||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 24909904 ttccagatggcacgtcttgcttctccaagcattatattttttgatgaggctgatgcaatt 24909963 Query: 1467 gctcctaaaag 1477 || |||||||| Sbjct: 24909964 gcccctaaaag 24909974 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1499 tggcaatgccacggtaggagaaagactcctatcaactttgttgactgaaatggatggttt 1558 ||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 24910356 tggcaatgccacggttggagaaagactcttatcaactctattgacggaaatggatggttt 24910415 Query: 1559 agaactggctacgg 1572 |||||||||||||| Sbjct: 24910416 agaactggctacgg 24910429 Score = 77.8 bits (39), Expect = 2e-10 Identities = 108/131 (82%) Strand = Plus / Plus Query: 542 ttctgtccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctga 601 |||||| |||||| | || ||||||||||| ||||||||| |||| || ||||| |||| Sbjct: 24908200 ttctgtgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactga 24908259 Query: 602 atcctactcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgc 661 | | || |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| Sbjct: 24908260 agcatattcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatga 24908319 Query: 662 tatatgtccac 672 |||||||||| Sbjct: 24908320 catatgtccac 24908330 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 684 aggagagagcaagagtcccgcattgttggtcagctgctaactctgatgga 733 ||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 24908410 aggagagagcaagggtcccgcattgttggtcagctgttgactctgatgga 24908459 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 1575 attattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttctccgccca 1634 |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 24910544 attattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttctgcgccca 24910603 Query: 1635 gggcgctttgatatggt 1651 ||||| || |||||||| Sbjct: 24910604 gggcgtttcgatatggt 24910620 Score = 67.9 bits (34), Expect = 1e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 792 agggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgag 851 ||||||||||| || || ||||| || | ||||| || ||||||||||||||||| ||| Sbjct: 24908698 agggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagatagag 24908757 Query: 852 gtcactgttcctacgttagaagaaaggctgcagattcttaag 893 || ||||||||||| |||||||||| | ||||||||||| Sbjct: 24908758 gttactgttcctacagcagaagaaaggttcgagattcttaag 24908799 Score = 61.9 bits (31), Expect = 9e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1750 tagcggagcgcaccgagctgttcactggtgctgatctcgaaggcctgtgcagggaagcag 1809 |||| ||||| |||||||| ||||| || || ||||| ||||||||||||||||| || | Sbjct: 24910794 tagcagagcgtaccgagcttttcacgggcgcagatcttgaaggcctgtgcagggaggcgg 24910853 Query: 1810 gaatggc 1816 ||||||| Sbjct: 24910854 gaatggc 24910860 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 438 cccagaggattgctgctctacggcccccctggcacaggaaag 479 |||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 24907827 cccagaggattgctgctccacggcccctctggcactggaaag 24907868 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 24907655 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 24907714 Query: 427 g 427 | Sbjct: 24907715 g 24907715 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ctccccgcgctccggcgaccc 154 ||||||||||||||||||||| Sbjct: 33033543 ctccccgcgctccggcgaccc 33033523
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 204 bits (103), Expect = 1e-48 Identities = 235/279 (84%) Strand = Plus / Plus Query: 892 agctttattccaagaatctgcatcttgatgaaagtgttgatcttcaaattattgctggat 951 |||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||| || Sbjct: 49824 agctttataccaagaatctacatcttggtgaatgtgttgatcttcaatctgttgctgcat 49883 Query: 952 ggtgcaatggttatgttggggctgatctagaagctctatgtcgagaagctgccagacttg 1011 |||||||||||| |||| |||||| || ||||| |||||||||||||||| |||| || Sbjct: 49884 cctgcaatggttatcttggagctgatttacaagctttatgtcgagaagctgcaagacgtg 49943 Query: 1012 cttaccgtagattgtcaaactcatccgaggatgggaaggtgctcacactactcatggaag 1071 |||| ||||||| |||| |||||| ||| || ||| ||||| || ||| ||||||| | Sbjct: 49944 cttatggtagattatcaagctcatcagagagtgagaatgtgctaacgctaatcatggagg 50003 Query: 1072 attgggagtctgctagatctcaggtcaaagcaagcatgataagaggggtaactaaagaag 1131 ||||||||||||||| |||| || |||| || ||| ||||||||||| ||||||| Sbjct: 50004 attgggagtctgctaaatctgtggccaaaaatagtgtgacaagaggggtaattaaagaaa 50063 Query: 1132 ctccaactgtttcatgggatgatataggaggtttgaaag 1170 |||| ||||||||||||||||||||||||||||||||| Sbjct: 50064 ttccagctgtttcatgggatgatataggaggtttgaaag 50102 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 1177 agaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaagac 1236 ||||||| || |||||||||||||| ||||||||||||||||||||| |||||| |||| Sbjct: 50179 agaaaaaacttcagcaagctgttgaatggcccatcaagcatgctgcttcatttgatagac 50238 Query: 1237 tggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacca 1296 | || |||||||| | ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 50239 ttggaatatcacctatccgtggggtgctattgcatggtccaccagggtgctcaaagacta 50298 Query: 1297 cccttgccaaggctgcagcacatgcagcccaagcttctttcttttc 1342 ||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 50299 cccttgcaaaggctgctgctcatgctgcccaagcttctttcttttc 50344 Score = 141 bits (71), Expect = 1e-29 Identities = 116/131 (88%) Strand = Plus / Plus Query: 1347 agtggtgcagaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaaca 1406 |||||||| || ||||||| |||||||| || ||||||||||||||||||||| | ||| Sbjct: 50707 agtggtgctgagttatactccaagtatgtcggtgaaggtgaagctttgttgcgacgtaca 50766 Query: 1407 tttcagagggcaaggctatcttctccaagcattatattttttgatgaggctgatgcaatt 1466 || |||| |||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 50767 ttccagatggcacgtcttgcttctccaagcattatattttttgatgaggctgatgcaatt 50826 Query: 1467 gctcctaaaag 1477 || |||||||| Sbjct: 50827 gcccctaaaag 50837 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1499 tggcaatgccacggtaggagaaagactcctatcaactttgttgactgaaatggatggttt 1558 ||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 51460 tggcaatgccacggttggagaaagactcttatcaactctattgacggaaatggatggttt 51519 Query: 1559 agaactggctacgg 1572 |||||||||||||| Sbjct: 51520 agaactggctacgg 51533 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1575 attattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttctccgccca 1634 |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 51648 attattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttctgcgccca 51707 Query: 1635 gggcgctttgatatggt 1651 ||||| ||||||||||| Sbjct: 51708 gggcgttttgatatggt 51724 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 684 aggagagagcaagagtcccgcattgttggtcagctgctaactctgatgga 733 ||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 49276 aggagagagcaagggtcccgcattgttggtcagctgttgactctgatgga 49325 Score = 67.9 bits (34), Expect = 1e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 792 agggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgag 851 ||||||||||| || || ||||| || | ||||| || ||||||||||||||||| ||| Sbjct: 49561 agggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagatagag 49620 Query: 852 gtcactgttcctacgttagaagaaaggctgcagattcttaag 893 || ||||||||||| |||||||||| | ||||||||||| Sbjct: 49621 gttactgttcctacagcagaagaaaggttcgagattcttaag 49662
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 204 bits (103), Expect = 1e-48 Identities = 235/279 (84%) Strand = Plus / Plus Query: 892 agctttattccaagaatctgcatcttgatgaaagtgttgatcttcaaattattgctggat 951 |||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||| || Sbjct: 18014497 agctttataccaagaatctacatcttggtgaatgtgttgatcttcaatctgttgctgcat 18014556 Query: 952 ggtgcaatggttatgttggggctgatctagaagctctatgtcgagaagctgccagacttg 1011 |||||||||||| |||| |||||| || ||||| |||||||||||||||| |||| || Sbjct: 18014557 cctgcaatggttatcttggagctgatttacaagctttatgtcgagaagctgcaagacgtg 18014616 Query: 1012 cttaccgtagattgtcaaactcatccgaggatgggaaggtgctcacactactcatggaag 1071 |||| ||||||| |||| |||||| ||| || ||| ||||| || ||| ||||||| | Sbjct: 18014617 cttatggtagattatcaagctcatcagagagtgagaatgtgctaacgctaatcatggagg 18014676 Query: 1072 attgggagtctgctagatctcaggtcaaagcaagcatgataagaggggtaactaaagaag 1131 ||||||||||||||| |||| || |||| || ||| ||||||||||| ||||||| Sbjct: 18014677 attgggagtctgctaaatctgtggccaaaaatagtgtgacaagaggggtaattaaagaaa 18014736 Query: 1132 ctccaactgtttcatgggatgatataggaggtttgaaag 1170 |||| ||||||||||||||||||||||||||||||||| Sbjct: 18014737 ttccagctgtttcatgggatgatataggaggtttgaaag 18014775 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 1177 agaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaagac 1236 ||||||| || |||||||||||||| ||||||||||||||||||||| |||||| |||| Sbjct: 18014852 agaaaaaacttcagcaagctgttgaatggcccatcaagcatgctgcttcatttgatagac 18014911 Query: 1237 tggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacca 1296 | || |||||||| | ||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 18014912 ttggaatatcacctatccgtggggtgctattgcatggtccaccagggtgctcaaagacta 18014971 Query: 1297 cccttgccaaggctgcagcacatgcagcccaagcttctttcttttc 1342 ||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 18014972 cccttgcaaaggctgctgctcatgctgcccaagcttctttcttttc 18015017 Score = 141 bits (71), Expect = 1e-29 Identities = 116/131 (88%) Strand = Plus / Plus Query: 1347 agtggtgcagaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaaca 1406 |||||||| || ||||||| |||||||| || ||||||||||||||||||||| | ||| Sbjct: 18015380 agtggtgctgagttatactccaagtatgtcggtgaaggtgaagctttgttgcgacgtaca 18015439 Query: 1407 tttcagagggcaaggctatcttctccaagcattatattttttgatgaggctgatgcaatt 1466 || |||| |||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18015440 ttccagatggcacgtcttgcttctccaagcattatattttttgatgaggctgatgcaatt 18015499 Query: 1467 gctcctaaaag 1477 || |||||||| Sbjct: 18015500 gcccctaaaag 18015510 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1499 tggcaatgccacggtaggagaaagactcctatcaactttgttgactgaaatggatggttt 1558 ||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 18016133 tggcaatgccacggttggagaaagactcttatcaactctattgacggaaatggatggttt 18016192 Query: 1559 agaactggctacgg 1572 |||||||||||||| Sbjct: 18016193 agaactggctacgg 18016206 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1575 attattgttttggccgctactaaccgccccaaggcaatcgatgcagctcttctccgccca 1634 |||||||| ||||| |||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 18016321 attattgtattggctgctactaatcgcccaaatgcaattgatgctgctcttctgcgccca 18016380 Query: 1635 gggcgctttgatatggt 1651 ||||| ||||||||||| Sbjct: 18016381 gggcgttttgatatggt 18016397 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 684 aggagagagcaagagtcccgcattgttggtcagctgctaactctgatgga 733 ||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 18013949 aggagagagcaagggtcccgcattgttggtcagctgttgactctgatgga 18013998 Score = 67.9 bits (34), Expect = 1e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 792 agggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgag 851 ||||||||||| || || ||||| || | ||||| || ||||||||||||||||| ||| Sbjct: 18014234 agggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagatagag 18014293 Query: 852 gtcactgttcctacgttagaagaaaggctgcagattcttaag 893 || ||||||||||| |||||||||| | ||||||||||| Sbjct: 18014294 gttactgttcctacagcagaagaaaggttcgagattcttaag 18014335
>ref|NM_126415.4| Arabidopsis thaliana CDC48B; ATP binding / ATP-dependent peptidase/ ATPase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase (CDC48B) mRNA, complete cds Length = 1958 Score = 131 bits (66), Expect = 1e-26 Identities = 231/286 (80%) Strand = Plus / Plus Query: 1176 aagaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaaga 1235 |||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||| || | Sbjct: 954 aagaaaaagctccagcaagctgttgaatggccaatcaaacattcagctgcatttgtaaaa 1013 Query: 1236 ctggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacc 1295 |||| ||||| ||| | ||||| | ||| | |||||||||||||| ||||||||||| Sbjct: 1014 atgggcatatcgccaatgcgtgggatacttctacatggtcctccaggttgctcaaagaca 1073 Query: 1296 acccttgccaaggctgcagcacatgcagcccaagcttctttcttttctttgagtggtgca 1355 || ||||| || || || ||| |||| || ||||| || |||||||| || || |||| Sbjct: 1074 actcttgctaaagccgctgcaaatgctgctcaagcctccttcttttccttaagctgtgcg 1133 Query: 1356 gaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaacatttcagagg 1415 || |||| || | ||||||||||||||||||||| || ||||| | |||||||| || Sbjct: 1134 gagctattttctatgtatgttggagaaggtgaagcattattgcggaatacatttcaaaga 1193 Query: 1416 gcaaggctatcttctccaagcattatattttttgatgaggctgatg 1461 || | || |||||||||| || ||||| |||||||| ||||||| Sbjct: 1194 gctcgacttgcttctccaagtataatattctttgatgaagctgatg 1239 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 435 tggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcctggt 490 ||||| ||||||||||| |||||||| || ||||| || || ||||||||| |||| Sbjct: 234 tggcctagaggattgcttctctacggtcctcctggaaccggcaagacaagcttggt 289
>gb|BT008371.1| Arabidopsis thaliana At2g03670 gene, complete cds Length = 1812 Score = 131 bits (66), Expect = 1e-26 Identities = 231/286 (80%) Strand = Plus / Plus Query: 1176 aagaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaaga 1235 |||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||| || | Sbjct: 883 aagaaaaagctccagcaagctgttgaatggccaatcaaacattcagctgcatttgtaaaa 942 Query: 1236 ctggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacc 1295 |||| ||||| ||| | ||||| | ||| | |||||||||||||| ||||||||||| Sbjct: 943 atgggcatatcgccaatgcgtgggatacttctacatggtcctccaggttgctcaaagaca 1002 Query: 1296 acccttgccaaggctgcagcacatgcagcccaagcttctttcttttctttgagtggtgca 1355 || ||||| || || || ||| |||| || ||||| || |||||||| || || |||| Sbjct: 1003 actcttgctaaagccgctgcaaatgctgctcaagcctccttcttttccttaagctgtgcg 1062 Query: 1356 gaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaacatttcagagg 1415 || |||| || | ||||||||||||||||||||| || ||||| | |||||||| || Sbjct: 1063 gagctattttctatgtatgttggagaaggtgaagcattattgcggaatacatttcaaaga 1122 Query: 1416 gcaaggctatcttctccaagcattatattttttgatgaggctgatg 1461 || | || |||||||||| || ||||| |||||||| ||||||| Sbjct: 1123 gctcgacttgcttctccaagtataatattctttgatgaagctgatg 1168 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 435 tggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcctggt 490 ||||| ||||||||||| |||||||| || ||||| || || ||||||||| |||| Sbjct: 163 tggcctagaggattgcttctctacggtcctcctggaaccggcaagacaagcttggt 218
>gb|AY062443.1| Arabidopsis thaliana putative AAA-type ATPase (At2g03670; F19B11.12) mRNA, complete cds Length = 1936 Score = 131 bits (66), Expect = 1e-26 Identities = 231/286 (80%) Strand = Plus / Plus Query: 1176 aagaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaaga 1235 |||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||| || | Sbjct: 934 aagaaaaagctccagcaagctgttgaatggccaatcaaacattcagctgcatttgtaaaa 993 Query: 1236 ctggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacc 1295 |||| ||||| ||| | ||||| | ||| | |||||||||||||| ||||||||||| Sbjct: 994 atgggcatatcgccaatgcgtgggatacttctacatggtcctccaggttgctcaaagaca 1053 Query: 1296 acccttgccaaggctgcagcacatgcagcccaagcttctttcttttctttgagtggtgca 1355 || ||||| || || || ||| |||| || ||||| || |||||||| || || |||| Sbjct: 1054 actcttgctaaagccgctgcaaatgctgctcaagcctccttcttttccttaagctgtgcg 1113 Query: 1356 gaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaacatttcagagg 1415 || |||| || | ||||||||||||||||||||| || ||||| | |||||||| || Sbjct: 1114 gagctattttctatgtatgttggagaaggtgaagcattattgcggaatacatttcaaaga 1173 Query: 1416 gcaaggctatcttctccaagcattatattttttgatgaggctgatg 1461 || | || |||||||||| || ||||| |||||||| ||||||| Sbjct: 1174 gctcgacttgcttctccaagtataatattctttgatgaagctgatg 1219 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 435 tggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcctggt 490 ||||| ||||||||||| |||||||| || ||||| || || ||||||||| |||| Sbjct: 214 tggcctagaggattgcttctctacggtcctcctggaaccggcaagacaagcttggt 269
>emb|BX818798.1|CNS0A8ZU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1872 Score = 123 bits (62), Expect = 3e-24 Identities = 230/286 (80%) Strand = Plus / Plus Query: 1176 aagaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaaga 1235 |||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||| || | Sbjct: 952 aagaaaaagctccagcaagctgttgaatggccaatcaaacattcagctgcatttgtaaaa 1011 Query: 1236 ctggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacc 1295 |||| ||||| ||| | ||||| | ||| | |||||||||||||| ||||||||||| Sbjct: 1012 atgggcatatcgccaatgcgtgggatacttctacatggtcctccaggttgctcaaagaca 1071 Query: 1296 acccttgccaaggctgcagcacatgcagcccaagcttctttcttttctttgagtggtgca 1355 || ||||| || || || ||| |||| || ||||| || |||||| | || || |||| Sbjct: 1072 actcttgctaaagccgctgcaaatgctgctcaagcctccttctttgccttaagctgtgcg 1131 Query: 1356 gaactatactcgaagtatgttggagaaggtgaagctttgttgcgaagaacatttcagagg 1415 || |||| || | ||||||||||||||||||||| || ||||| | |||||||| || Sbjct: 1132 gagctattttctatgtatgttggagaaggtgaagcattattgcggaatacatttcaaaga 1191 Query: 1416 gcaaggctatcttctccaagcattatattttttgatgaggctgatg 1461 || | || |||||||||| || ||||| |||||||| ||||||| Sbjct: 1192 gctcgacttgcttctccaagtataatattctttgatgaagctgatg 1237 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 435 tggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcctggt 490 ||||| ||||||||||| |||||||| || ||||| || || ||||||||| |||| Sbjct: 231 tggcctagaggattgcttctctacggtcctcctggaaccggcaagacaagcttggt 286
>gb|AC006836.7| Arabidopsis thaliana chromosome 2 clone F19B11 map RNSI, complete sequence Length = 87543 Score = 99.6 bits (50), Expect = 4e-17 Identities = 137/166 (82%) Strand = Plus / Plus Query: 1177 agaaaaagctccagcaagctgttgagtggcccatcaagcatgctgctgcatttgcaagac 1236 ||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||| || | Sbjct: 40239 agaaaaagctccagcaagctgttgaatggccaatcaaacattcagctgcatttgtaaaaa 40298 Query: 1237 tggggatatcaccagttcgtggtgtgcttttgcatggtcctccagggtgctcaaagacca 1296 |||| ||||| ||| | ||||| | ||| | |||||||||||||| ||||||||||| | Sbjct: 40299 tgggcatatcgccaatgcgtgggatacttctacatggtcctccaggttgctcaaagacaa 40358 Query: 1297 cccttgccaaggctgcagcacatgcagcccaagcttctttcttttc 1342 | ||||| || || || ||| |||| || ||||| || |||||||| Sbjct: 40359 ctcttgctaaagccgctgcaaatgctgctcaagcctccttcttttc 40404 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1370 gtatgttggagaaggtgaagctttgttgcgaagaacatttcagagggcaaggctatcttc 1429 ||||||||||||||||||||| || ||||| | |||||||| || || | || |||| Sbjct: 40537 gtatgttggagaaggtgaagcattattgcggaatacatttcaaagagctcgacttgcttc 40596 Query: 1430 tccaagcattatattttttgatgaggctgatg 1461 |||||| || ||||| |||||||| ||||||| Sbjct: 40597 tccaagtataatattctttgatgaagctgatg 40628 Score = 42.1 bits (21), Expect = 8.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 433 agtggcccagaggattgctgctctacggcccccctgg 469 ||||||| ||||||||||| |||||||| || ||||| Sbjct: 38980 agtggcctagaggattgcttctctacggtcctcctgg 39016
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 83.8 bits (42), Expect = 2e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 892 agctttattccaagaatctgcatcttgatgaaagtgttgatcttcaaattattgctggat 951 |||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||| || Sbjct: 170677 agctttataccaagaatctacatcttggtgaatgtgttgatcttcaatctgttgctgcat 170736 Query: 952 ggtgcaatggttatgttggggctgat 977 ||||||||||||||||| |||||| Sbjct: 170737 cctgcaatggttatgttggagctgat 170762 Score = 77.8 bits (39), Expect = 2e-10 Identities = 108/131 (82%) Strand = Plus / Plus Query: 542 ttctgtccataaagctcatgctggagagggcgagaagttcctgcgtgaagctttctctga 601 |||||| |||||| | || ||||||||||| ||||||||| |||| || ||||| |||| Sbjct: 169916 ttctgtgcataaaccccacgctggagagggggagaagttcatgcgagaggcttttactga 169975 Query: 602 atcctactcccaggcgtcacagggcagaccagccattattttcatcgatgaattggatgc 661 | | || |||||||| |||||||| ||||||||| | || ||||| |||||| | |||| Sbjct: 169976 agcatattcccaggcatcacagggtagaccagccgtgatattcattgatgaacttgatga 170035 Query: 662 tatatgtccac 672 |||||||||| Sbjct: 170036 catatgtccac 170046 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 684 aggagagagcaagagtcccgcattgttggtcagctgctaactctgatgga 733 ||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 170126 aggagagagcaagggtcccgcattgttggtcagctgttgactctgatgga 170175 Score = 67.9 bits (34), Expect = 1e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 792 agggtggatgccatcgatccagcattgaggaggccaggacgttttgactcagagattgag 851 ||||||||||| || || ||||| || | ||||| || ||||||||||||||||| ||| Sbjct: 170414 agggtggatgctattgagtcagcactgcgaaggcctgggcgttttgactcagagatagag 170473 Query: 852 gtcactgttcctacgttagaagaaaggctgcagattcttaag 893 || ||||||||||| |||||||||| | ||||||||||| Sbjct: 170474 gttactgttcctacagcagaagaaaggttcgagattcttaag 170515 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 438 cccagaggattgctgctctacggcccccctggcacaggaaag 479 |||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 169543 cccagaggattgctgctccacggcccctctggcactggaaag 169584 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 367 aggctctccgggagctcgtgatttatcccttcctctacgctcgccagtcccgcctgctcg 426 |||||||||||||||||||||| ||||| |||||||||| || || ||||| |||||| Sbjct: 169371 aggctctccgggagctcgtgatgtatcctgtcctctacgcacgggaggcccgcgtgctcg 169430 Query: 427 g 427 | Sbjct: 169431 g 169431
>emb|BX819234.1|CNS0A91O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1984 Score = 81.8 bits (41), Expect = 1e-11 Identities = 155/193 (80%) Strand = Plus / Plus Query: 1269 catggtcctccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaa 1328 |||||||||||||| ||||||||||| || ||||| || || || ||| |||| || ||| Sbjct: 1109 catggtcctccaggttgctcaaagacaactcttgctaaagccgctgcaaatgctgctcaa 1168 Query: 1329 gcttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaa 1388 || || |||||||| || || |||| || |||| || | ||||||||||||||||||| Sbjct: 1169 gcctccttcttttccttaagctgtgcggagctattttctatgtatgttggagaaggtgaa 1228 Query: 1389 gctttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatatttttt 1448 || || ||||| | |||||||| || || | || |||||||||| || ||||| ||| Sbjct: 1229 gcattattgcggaatacatttcaaagagctcgacttgcttctccaagtataatattcttt 1288 Query: 1449 gatgaggctgatg 1461 ||||| ||||||| Sbjct: 1289 gatgaagctgatg 1301 Score = 52.0 bits (26), Expect = 0.009 Identities = 50/58 (86%) Strand = Plus / Plus Query: 433 agtggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcctggt 490 ||||||| ||||||||||| |||||||| || ||||| || || ||||||||| |||| Sbjct: 293 agtggcctagaggattgcttctctacggtcctcctggaaccggcaagacaagcttggt 350
>emb|BX821039.1|CNS0A7WH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1912 Score = 58.0 bits (29), Expect = 1e-04 Identities = 152/193 (78%) Strand = Plus / Plus Query: 1269 catggtcctccagggtgctcaaagaccacccttgccaaggctgcagcacatgcagcccaa 1328 |||||||||||||| ||||||| || || ||||| || || || ||| |||| || ||| Sbjct: 1048 catggtcctccaggttgctcaaccacaactcttgctaaagccgctgcaaatgctgctcaa 1107 Query: 1329 gcttctttcttttctttgagtggtgcagaactatactcgaagtatgttggagaaggtgaa 1388 || || | |||||| || || |||| || |||| || | ||||||||||||||||||| Sbjct: 1108 gcctcctccttttccttaagctgtgcggagctattttctatgtatgttggagaaggtgaa 1167 Query: 1389 gctttgttgcgaagaacatttcagagggcaaggctatcttctccaagcattatatttttt 1448 || || ||||| | |||||||| || || | || |||||||||| || ||||| ||| Sbjct: 1168 gcattattgcggaatacatttcaaagagctcgacttgcttctccaagtataatattcttt 1227 Query: 1449 gatgaggctgatg 1461 ||||| ||||||| Sbjct: 1228 gatgacgctgatg 1240 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 435 tggcccagaggattgctgctctacggcccccctggcacaggaaagacaagcctggt 490 ||||| ||||||||||| |||||||| || ||||| || || ||||||||| |||| Sbjct: 234 tggcctagaggattgcttctctacggtcctcctggaaccggcaagacaagcttggt 289
>ref|XM_392892.3| PREDICTED: Apis mellifera similar to TER94 CG2331-PA, isoform A, transcript variant 1 (LOC409377), mRNA Length = 3290 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1128 gaagctccaactgtttcatgggatgatataggaggttt 1165 |||| |||||||||| ||||||||||||| |||||||| Sbjct: 1510 gaagttccaactgttacatgggatgatattggaggttt 1547
>emb|AL138685.21| Human DNA sequence from clone RP11-186J16 on chromosome 13 Contains the 3' end of the LHFP gene for lipoma HMGIC fusion partner, complete sequence Length = 84686 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2122 tctttcttttttttaatgaaaaat 2145 |||||||||||||||||||||||| Sbjct: 9035 tctttcttttttttaatgaaaaat 9012
>ref|XM_739971.1| Plasmodium chabaudi chabaudi 26S protease subunit regulatory subunit 6a (PC000285.05.0) partial mRNA Length = 1356 Score = 48.1 bits (24), Expect = 0.13 Identities = 33/36 (91%) Strand = Plus / Plus Query: 629 accagccattattttcatcgatgaattggatgctat 664 |||||| |||||||| ||||||||||| |||||||| Sbjct: 873 accagctattatttttatcgatgaattagatgctat 908
>ref|XM_511389.2| PREDICTED: Pan troglodytes similar to Chromosome 17 open reading frame 42, transcript variant 2 (LOC454560), mRNA Length = 2487 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaatg 2146 ||||||||||||||||||||||| Sbjct: 2074 tttcttttttttaatgaaaaatg 2052
>ref|XM_001055413.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 3110023G01 (predicted) (RGD1564708_predicted), mRNA Length = 1539 Score = 46.1 bits (23), Expect = 0.53 Identities = 35/39 (89%) Strand = Plus / Plus Query: 443 aggattgctgctctacggcccccctggcacaggaaagac 481 |||| ||||||| ||||||||||| |||||||| ||||| Sbjct: 966 aggactgctgctttacggccccccaggcacagggaagac 1004
>ref|XM_225707.4| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 3110023G01 (predicted) (RGD1564708_predicted), mRNA Length = 1956 Score = 46.1 bits (23), Expect = 0.53 Identities = 35/39 (89%) Strand = Plus / Plus Query: 443 aggattgctgctctacggcccccctggcacaggaaagac 481 |||| ||||||| ||||||||||| |||||||| ||||| Sbjct: 966 aggactgctgctttacggccccccaggcacagggaagac 1004
>ref|XM_961599.1| PREDICTED: Tribolium castaneum similar to CG2331-PA, isoform A, transcript variant 1 (LOC661187), mRNA Length = 2619 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 636 attattttcatcgatgaattgga 658 ||||||||||||||||||||||| Sbjct: 998 attattttcatcgatgaattgga 1020
>ref|XM_970790.1| PREDICTED: Tribolium castaneum similar to CG2331-PA, isoform A, transcript variant 3 (LOC661187), mRNA Length = 2637 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 636 attattttcatcgatgaattgga 658 ||||||||||||||||||||||| Sbjct: 998 attattttcatcgatgaattgga 1020
>gb|BC056963.1| Mus musculus RIKEN cDNA 3110023G01 gene, mRNA (cDNA clone IMAGE:5716739) Length = 2022 Score = 46.1 bits (23), Expect = 0.53 Identities = 35/39 (89%) Strand = Plus / Plus Query: 443 aggattgctgctctacggcccccctggcacaggaaagac 481 |||| ||||||| ||||||||||| |||||||| ||||| Sbjct: 886 aggactgctgctttacggccccccaggcacagggaagac 924
>gb|AC122574.7| Rattus norvegicus 7 BAC CH230-134L8 (Children's Hospital Oakland Research Institute) complete sequence Length = 54870 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2128 ttttttttaatgaaaaatgagaa 2150 ||||||||||||||||||||||| Sbjct: 25793 ttttttttaatgaaaaatgagaa 25771
>gb|AC149128.3| Medicago truncatula chromosome 7 BAC clone mth2-139i2, complete sequence Length = 93434 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1536 ttgttgactgaaatggatggttt 1558 ||||||||||||||||||||||| Sbjct: 34372 ttgttgactgaaatggatggttt 34350
>dbj|AK014074.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110023G01 product:hypothetical AAA ATPase superfamily containing protein, full insert sequence Length = 2040 Score = 46.1 bits (23), Expect = 0.53 Identities = 35/39 (89%) Strand = Plus / Plus Query: 443 aggattgctgctctacggcccccctggcacaggaaagac 481 |||| ||||||| ||||||||||| |||||||| ||||| Sbjct: 1050 aggactgctgctttacggccccccaggcacagggaagac 1088
>ref|NM_027721.1| Mus musculus katanin p60 subunit A-like 2 (Katnal2), mRNA dbj|AK017114.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933439B08 product:hypothetical AAA ATPase superfamily containing protein, full insert sequence Length = 1674 Score = 46.1 bits (23), Expect = 0.53 Identities = 35/39 (89%) Strand = Plus / Plus Query: 443 aggattgctgctctacggcccccctggcacaggaaagac 481 |||| ||||||| ||||||||||| |||||||| ||||| Sbjct: 940 aggactgctgctttacggccccccaggcacagggaagac 978
>dbj|AK079750.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430056H03 product:unclassifiable, full insert sequence Length = 2950 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaaaa 2143 ||||||||||||||||||||||| Sbjct: 2878 ttctttcttttttttaatgaaaa 2900
>gb|AC091177.3| Homo sapiens chromosome 17, clone CTD-3098J15, complete sequence Length = 25973 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaatg 2146 ||||||||||||||||||||||| Sbjct: 22027 tttcttttttttaatgaaaaatg 22005
>emb|AL137798.8| Human DNA sequence from clone RP5-1182A14 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and three CpG islands, complete sequence Length = 146141 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2121 ttctttcttttttttaatgaaaa 2143 ||||||||||||||||||||||| Sbjct: 116233 ttctttcttttttttaatgaaaa 116211
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 46.1 bits (23), Expect = 0.53 Identities = 29/31 (93%) Strand = Plus / Plus Query: 634 ccattattttcatcgatgaattggatgctat 664 ||||||| ||||||||||| ||||||||||| Sbjct: 1107382 ccattatcttcatcgatgagttggatgctat 1107412
>ref|NM_001023503.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC965.04c), partial mRNA Length = 2130 Score = 46.1 bits (23), Expect = 0.53 Identities = 29/31 (93%) Strand = Plus / Plus Query: 634 ccattattttcatcgatgaattggatgctat 664 ||||||| || |||||||||||||||||||| Sbjct: 1082 ccattatatttatcgatgaattggatgctat 1112
>emb|AL023590.1|SPCC965 S.pombe chromosome III cosmid c965 Length = 38090 Score = 46.1 bits (23), Expect = 0.53 Identities = 29/31 (93%) Strand = Plus / Minus Query: 634 ccattattttcatcgatgaattggatgctat 664 ||||||| || |||||||||||||||||||| Sbjct: 9375 ccattatatttatcgatgaattggatgctat 9345
>emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 187964 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2130 ttttttaatgaaaaatgagaatt 2152 ||||||||||||||||||||||| Sbjct: 182390 ttttttaatgaaaaatgagaatt 182368
>gb|AC130324.21| Homo sapiens chromosome 17, clone RP13-753N3, complete sequence Length = 153520 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaatg 2146 ||||||||||||||||||||||| Sbjct: 5143 tttcttttttttaatgaaaaatg 5121
>ref|NM_210465.1| Eremothecium gossypii AER254Wp (AER254W), mRNA Length = 1383 Score = 46.1 bits (23), Expect = 0.53 Identities = 29/31 (93%) Strand = Plus / Plus Query: 634 ccattattttcatcgatgaattggatgctat 664 ||||||| ||||||||||| ||||||||||| Sbjct: 905 ccattatcttcatcgatgagttggatgctat 935
>gb|AC167013.4| Mus musculus BAC clone RP23-262F9 from chromosome 14, complete sequence Length = 236791 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2121 ttctttcttttttttaatgaaaa 2143 ||||||||||||||||||||||| Sbjct: 82783 ttctttcttttttttaatgaaaa 82761
>ref|XM_425834.2| PREDICTED: Gallus gallus proteasome (prosome, macropain) 26S subunit, ATPase, 5 (PSMC5), mRNA Length = 1341 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 448 tgctgctctacggcccccctggcacaggaaagac 481 ||||||||||||| ||||||||||| || ||||| Sbjct: 627 tgctgctctacggaccccctggcactggcaagac 660
>ref|XM_001225962.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08307) mRNA, complete cds Length = 810 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 448 tgctgctctacggcccccctggcacaggaaagac 481 |||||||||||||||| || ||||| |||||||| Sbjct: 146 tgctgctctacggccctccgggcaccggaaagac 179
>gb|CP000414.1| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293, complete genome Length = 2038396 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1444 tttttgatgaggctgatgcaat 1465 |||||||||||||||||||||| Sbjct: 492255 tttttgatgaggctgatgcaat 492276
>gb|AC187519.3| Pan troglodytes BAC clone CH251-634N6 from chromosome 7, complete sequence Length = 206800 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1243 tatcaccagttcgtggtgtgcttttgcatggtcc 1276 ||||| || |||||||||||| |||||||||||| Sbjct: 37556 tatcagcacttcgtggtgtgcctttgcatggtcc 37523
>ref|XM_962580.1| PREDICTED: Tribolium castaneum similar to CG10370-PA (LOC656024), mRNA Length = 1281 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 636 attattttcatcgatgaattggatgc 661 ||||| |||||||||||||||||||| Sbjct: 805 attatcttcatcgatgaattggatgc 830
>ref|XM_369865.1| Magnaporthe grisea 70-15 hypothetical protein (MG06380.4) partial mRNA Length = 5121 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1254 cgtggtgtgcttttgcatggtcctcc 1279 |||||||||||||| ||||||||||| Sbjct: 1963 cgtggtgtgcttttccatggtcctcc 1988
>gb|DQ215255.1| Taeniopygia guttata clone 0058P0058A01 proteasome 26S subunit ATPase 5 variant 1-like mRNA, complete sequence Length = 1364 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 448 tgctgctctacggcccccctggcacaggaaagac 481 ||||||||||||||||||| ||||| || ||||| Sbjct: 580 tgctgctctacggcccccccggcacggggaagac 613
>gb|DQ215254.1| Taeniopygia guttata clone 0058P0013B10 proteasome 26S subunit ATPase 5 variant 1-like mRNA, complete sequence Length = 1364 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 448 tgctgctctacggcccccctggcacaggaaagac 481 ||||||||||||||||||| ||||| || ||||| Sbjct: 566 tgctgctctacggcccccccggcacggggaagac 599
>gb|AY593479.1| Collimonas fungivorans fosmid CFUFOS19, complete sequence Length = 38984 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1668 ccagatgcacaaggaaggcaag 1689 |||||||||||||||||||||| Sbjct: 26151 ccagatgcacaaggaaggcaag 26130
>gb|AC145222.18| Medicago truncatula clone mth2-29a15, complete sequence Length = 134651 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaat 2145 |||||||||||||||||||||| Sbjct: 49001 tttcttttttttaatgaaaaat 48980
>gb|AC098890.3| Mus musculus BAC clone RP23-122P22 from X, complete sequence Length = 202740 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2124 tttcttttttttaatgaaaaat 2145 |||||||||||||||||||||| Sbjct: 2280 tttcttttttttaatgaaaaat 2301
>gb|AC073125.5| Homo sapiens BAC clone RP11-636L15 from 7, complete sequence Length = 188804 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1243 tatcaccagttcgtggtgtgcttttgcatggtcc 1276 ||||| || |||||||||||| |||||||||||| Sbjct: 59197 tatcagcacttcgtggtgtgcctttgcatggtcc 59164
>ref|NM_001034294.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA gb|BC103125.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), mRNA (cDNA clone MGC:128142 IMAGE:7988284), complete cds Length = 3258 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 636 attattttcatcgatgaattggatgc 661 ||||||||||| |||||||||||||| Sbjct: 1159 attattttcattgatgaattggatgc 1184
>emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, complete sequence Length = 29688 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2124 tttcttttttttaatgaaaaat 2145 |||||||||||||||||||||| Sbjct: 19588 tttcttttttttaatgaaaaat 19609
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2130 ttttttaatgaaaaatgagaat 2151 |||||||||||||||||||||| Sbjct: 17292657 ttttttaatgaaaaatgagaat 17292636
>emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in linkage group 20, complete sequence Length = 207204 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2121 ttctttcttttttttaatgaaa 2142 |||||||||||||||||||||| Sbjct: 40119 ttctttcttttttttaatgaaa 40098
>gb|AC139663.4| Homo sapiens 12 BAC RP11-641A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86563 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2123 ctttcttttttttaatgaaaaa 2144 |||||||||||||||||||||| Sbjct: 44700 ctttcttttttttaatgaaaaa 44679
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2130 ttttttaatgaaaaatgagaat 2151 |||||||||||||||||||||| Sbjct: 153282 ttttttaatgaaaaatgagaat 153261
>emb|AJ717920.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT14-410, cultivar Bright Yellow 2 Length = 370 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 810 ccagcattgaggaggccaggacgttttgac 839 ||||||||||||||||| ||||| |||||| Sbjct: 58 ccagcattgaggaggcccggacgatttgac 87
>emb|CR386298.1| Gallus gallus finished cDNA, clone ChEST117k22 Length = 1317 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 448 tgctgctctacggcccccctggcacaggaaagac 481 ||||||||||||| ||||||||||| || ||||| Sbjct: 605 tgctgctctacggaccccctggcactggcaagac 638
>emb|BX950722.2| Gallus gallus finished cDNA, clone ChEST201g21 Length = 1367 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 448 tgctgctctacggcccccctggcacaggaaagac 481 ||||||||||||| ||||||||||| || ||||| Sbjct: 606 tgctgctctacggaccccctggcactggcaagac 639
>emb|AL669958.14| Mouse DNA sequence from clone RP23-213K6 on chromosome X, complete sequence Length = 195411 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2124 tttcttttttttaatgaaaaat 2145 |||||||||||||||||||||| Sbjct: 69206 tttcttttttttaatgaaaaat 69227
>ref|XM_001228597.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_10671) mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 453 ctctacggcccccctggcacaggaaagac 481 |||||||||||||||||||| || ||||| Sbjct: 241 ctctacggcccccctggcaccggcaagac 269
>ref|NM_001060610.1| Oryza sativa (japonica cultivar-group) Os04g0648500 (Os04g0648500) mRNA, complete cds Length = 1844 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ctccccgcgctccggcgaccc 154 ||||||||||||||||||||| Sbjct: 133 ctccccgcgctccggcgaccc 153
>ref|NM_001056859.1| Oryza sativa (japonica cultivar-group) Os03g0403400 (Os03g0403400) mRNA, complete cds Length = 2357 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcggcttaccgtccggcctgc 196 ||||||||||||||||||||| Sbjct: 2199 gcggcttaccgtccggcctgc 2219
>gb|CP000447.1| Shewanella frigidimarina NCIMB 400, complete genome Length = 4845257 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 gacggcgagacggttgcacgt 323 ||||||||||||||||||||| Sbjct: 10226 gacggcgagacggttgcacgt 10246
>gb|CP000450.1| Nitrosomonas eutropha C71, complete genome Length = 2661057 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 633 gccattattttcatcgatgaattggatgc 661 ||||| || |||||||||||||||||||| Sbjct: 1454969 gccatcatcttcatcgatgaattggatgc 1454941
>gb|AC184799.2| Pan troglodytes BAC clone CH251-623C19 from chromosome 7, complete sequence Length = 197065 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaa 2144 ||||||||||||||||||||| Sbjct: 166643 tttcttttttttaatgaaaaa 166623
>gb|AC187131.1| Callithrix jacchus chromosome UNK clone CH259-90H12, complete sequence Length = 181906 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2118 tggttctttcttttttttaat 2138 ||||||||||||||||||||| Sbjct: 175301 tggttctttcttttttttaat 175281
>emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0821G03, complete sequence Length = 75285 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ctccccgcgctccggcgaccc 154 ||||||||||||||||||||| Sbjct: 63392 ctccccgcgctccggcgaccc 63372
>gb|AF252279.1| Homo sapiens SCA8 gene, partial sequence; and Kelch-like 1 protein (KLHL1) gene, partial cds Length = 166350 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 914 tcttgatgaaagtgttgatcttcaa 938 ||||||||||| ||||||||||||| Sbjct: 26094 tcttgatgaaattgttgatcttcaa 26118
>gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation syndrome protein (FMR1) gene, alternative splice products, complete cds; and pseudogene, complete sequence Length = 185775 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaaaaat 2145 |||| |||||||||||||||||||| Sbjct: 184573 ttctctcttttttttaatgaaaaat 184597
>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland Research Institute) complete sequence Length = 238466 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2127 cttttttttaatgaaaaatga 2147 ||||||||||||||||||||| Sbjct: 60930 cttttttttaatgaaaaatga 60910
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 183422 ttctttcttttttttaatgaa 183442
>ref|XM_454250.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E06688g predicted mRNA Length = 2310 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 636 attattttcatcgatgaattggatgctat 664 ||||| || |||||||||||||||||||| Sbjct: 1192 attatctttatcgatgaattggatgctat 1220
>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete sequence Length = 166751 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2127 cttttttttaatgaaaaatga 2147 ||||||||||||||||||||| Sbjct: 56496 cttttttttaatgaaaaatga 56476
>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence Length = 1608 Score = 42.1 bits (21), Expect = 8.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1436 cattatattttttgatgaggctgatgcaattgc 1468 |||||||||| ||||||||| ||||||||||| Sbjct: 820 cattatatttattgatgaggtagatgcaattgc 852
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence Length = 238123 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1373 tgttggagaaggtgaagctttgttg 1397 |||||||||||||| |||||||||| Sbjct: 234957 tgttggagaaggtgcagctttgttg 234933
>gb|AC102435.6| Mus musculus chromosome 12, clone RP24-123B22, complete sequence Length = 155483 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1373 tgttggagaaggtgaagctttgttg 1397 |||||||||||||||||| |||||| Sbjct: 44455 tgttggagaaggtgaagccttgttg 44479
>gb|AC122243.3| Mus musculus BAC clone RP23-148C10 from chromosome 17, complete sequence Length = 204584 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2111 atttgtgtggttctttctttttttt 2135 |||| |||||||||||||||||||| Sbjct: 155360 atttttgtggttctttctttttttt 155336
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2125 ttcttttttttaatgaaaaat 2145 ||||||||||||||||||||| Sbjct: 129280 ttcttttttttaatgaaaaat 129260
>gb|AC158310.3| Mus musculus chromosome 5, clone RP23-106N8, complete sequence Length = 218714 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 198641 ttctttcttttttttaatgaa 198661
>gb|AY299364.1| Otochilus lancilabius chloroplast tRNA-Lys (trnK) gene, intron; and maturase K (matK) pseudogene, complete sequence Length = 1814 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaa 2144 ||||||||||||||||||||| Sbjct: 1607 tttcttttttttaatgaaaaa 1587
>gb|AC087883.12| Homo sapiens 12q BAC RP11-335M9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161166 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaa 2144 ||||||||||||||||||||| Sbjct: 32040 tttcttttttttaatgaaaaa 32020
>gb|AC105987.21| Mus musculus chromosome 5, clone RP24-446I1, complete sequence Length = 192043 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 66028 ttctttcttttttttaatgaa 66008
>dbj|AK140668.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930080E20 product:myocardin, full insert sequence Length = 3960 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1712 gaagatgaagctgggggagga 1732 ||||||||||||||||||||| Sbjct: 3761 gaagatgaagctgggggagga 3781
>emb|Z66516.1|CEW03C9 Caenorhabditis elegans Cosmid W03C9, complete sequence Length = 36103 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 29411 ttctttcttttttttaatgaa 29431
>gb|AC006054.2| Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143738 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2121 ttctttcttttttttaatgaaaaat 2145 |||| |||||||||||||||||||| Sbjct: 84780 ttctctcttttttttaatgaaaaat 84756
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1750 tagcggagcgcaccgagctgttcac 1774 |||||||| |||||||||||||||| Sbjct: 18839045 tagcggagagcaccgagctgttcac 18839021
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcggcttaccgtccggcctgc 196 ||||||||||||||||||||| Sbjct: 16259427 gcggcttaccgtccggcctgc 16259447 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 21483540 ttctttcttttttttaatgaa 21483560
>emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 in linkage group 13, complete sequence Length = 180933 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2099 gcatcatgatacatttgtgtg 2119 ||||||||||||||||||||| Sbjct: 77698 gcatcatgatacatttgtgtg 77718
>emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in linkage group 7, complete sequence Length = 180005 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 174168 ttctttcttttttttaatgaa 174188
>emb|AL390029.35| Human DNA sequence from clone RP11-560N15 on chromosome 13 Contains part of the DCAMKL1 gene for doublecortin and CaM kinase-like 1 (DCLK KIAA0369) and a CpG island, complete sequence Length = 164317 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaa 2144 ||||||||||||||||||||| Sbjct: 42441 tttcttttttttaatgaaaaa 42421
>ref|XM_686405.1| PREDICTED: Danio rerio similar to two AAA domain containing protein (LOC563039), partial mRNA Length = 3185 Score = 42.1 bits (21), Expect = 8.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 441 agaggattgctgctctacggcccccctggcacaggaaagac 481 ||||||| ||| |||| ||||| ||||||||||||||||| Sbjct: 1361 agaggatgtctgttctatggccctcctggcacaggaaagac 1401
>gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosome 13, complete sequence Length = 168567 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2115 gtgtggttctttcttttttttaatgaaaa 2143 |||||||| ||| |||||||||||||||| Sbjct: 19118 gtgtggtttttttttttttttaatgaaaa 19090
>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete sequence Length = 135585 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcggcttaccgtccggcctgc 196 ||||||||||||||||||||| Sbjct: 63810 gcggcttaccgtccggcctgc 63830
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 636 attattttcatcgatgaattggatgctat 664 ||||| || |||||||||||||||||||| Sbjct: 608305 attatctttatcgatgaattggatgctat 608277
>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216621 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2128 ttttttttaatgaaaaatgag 2148 ||||||||||||||||||||| Sbjct: 73905 ttttttttaatgaaaaatgag 73885
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 42.1 bits (21), Expect = 8.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1435 gcattatattttttgatgaggctgatgcaattg 1467 ||||||||||| | ||||||| ||||||||||| Sbjct: 75397 gcattatatttatcgatgaggttgatgcaattg 75429
>emb|AL669846.11| Mouse DNA sequence from clone RP23-298L23 on chromosome 11 Contains the Srfcp-pending gene for SRF co-factor protein, a novel gene (A730013G04) and a CpG island, complete sequence Length = 128747 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1712 gaagatgaagctgggggagga 1732 ||||||||||||||||||||| Sbjct: 5086 gaagatgaagctgggggagga 5066
>emb|BX548000.6| Zebrafish DNA sequence from clone CH211-199M8 in linkage group 11, complete sequence Length = 216767 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2127 cttttttttaatgaaaaatga 2147 ||||||||||||||||||||| Sbjct: 211861 cttttttttaatgaaaaatga 211841
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2128 ttttttttaatgaaaaatgag 2148 ||||||||||||||||||||| Sbjct: 161422 ttttttttaatgaaaaatgag 161402
>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226168 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2128 ttttttttaatgaaaaatgag 2148 ||||||||||||||||||||| Sbjct: 76780 ttttttttaatgaaaaatgag 76760
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence Length = 185555 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1532 aactttgttgactgaaatgga 1552 ||||||||||||||||||||| Sbjct: 136467 aactttgttgactgaaatgga 136487
>dbj|BS000218.1| Pan troglodytes chromosome 22 clone:PTB-414O06, map 22, complete sequences Length = 92059 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2124 tttcttttttttaatgaaaaa 2144 ||||||||||||||||||||| Sbjct: 37705 tttcttttttttaatgaaaaa 37685
>dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E06, full insert sequence Length = 2363 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcggcttaccgtccggcctgc 196 ||||||||||||||||||||| Sbjct: 2205 gcggcttaccgtccggcctgc 2225
>emb|BX829456.1|CNS09YWY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1278 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1677 caaggaaggcaagagatatta 1697 ||||||||||||||||||||| Sbjct: 214 caaggaaggcaagagatatta 194
>emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in linkage group 7, complete sequence Length = 152617 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2121 ttctttcttttttttaatgaa 2141 ||||||||||||||||||||| Sbjct: 91574 ttctttcttttttttaatgaa 91554
>dbj|AK071891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057F24, full insert sequence Length = 1858 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ctccccgcgctccggcgaccc 154 ||||||||||||||||||||| Sbjct: 135 ctccccgcgctccggcgaccc 155
>dbj|AK064227.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-G10, full insert sequence Length = 1751 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ctccccgcgctccggcgaccc 154 ||||||||||||||||||||| Sbjct: 115 ctccccgcgctccggcgaccc 135
>dbj|AK115487.1| Ciona intestinalis cDNA, clone:cieg055n02, full insert sequence Length = 2486 Score = 42.1 bits (21), Expect = 8.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 634 ccattattttcatcgatgaattggatgct 662 |||||||||||||||||||| | |||||| Sbjct: 1046 ccattattttcatcgatgaaattgatgct 1074
>gb|AC105406.6| Mus musculus BAC clone RP24-119K15 from 7, complete sequence Length = 175423 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaaaaat 2145 |||||||||| |||||||||||||| Sbjct: 77036 ttctttctttcttttaatgaaaaat 77060
>emb|AL845418.17| Mouse DNA sequence from clone RP23-207F4 on chromosome 2, complete sequence Length = 165376 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2121 ttctttcttttttttaatgaaaaat 2145 |||||| |||||||||||||||||| Sbjct: 72794 ttcttttttttttttaatgaaaaat 72818
>emb|AL110479.1|CEY105C5B Caenorhabditis elegans YAC Y105C5B, complete sequence Length = 321304 Score = 42.1 bits (21), Expect = 8.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 2007 ttttgttcaagttcgtgttacacaagcattttagacc 2043 ||||||||||||| ||||| ||||||||||||||| Sbjct: 41952 ttttgttcaagtttgtgttcgccaagcattttagacc 41988 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2125 ttcttttttttaatgaaaaat 2145 ||||||||||||||||||||| Sbjct: 200076 ttcttttttttaatgaaaaat 200096
>gb|AC132603.4| Mus musculus BAC clone RP24-66C10 from 1, complete sequence Length = 218575 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1146 tgggatgatataggaggtttg 1166 ||||||||||||||||||||| Sbjct: 71193 tgggatgatataggaggtttg 71213
>gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosome 17, complete sequence Length = 217732 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2111 atttgtgtggttctttctttttttt 2135 |||| |||||||||||||||||||| Sbjct: 162912 atttttgtggttctttctttttttt 162936
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1750 tagcggagcgcaccgagctgttcac 1774 |||||||| |||||||||||||||| Sbjct: 131334 tagcggagagcaccgagctgttcac 131358
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ctccccgcgctccggcgaccc 154 ||||||||||||||||||||| Sbjct: 43124 ctccccgcgctccggcgaccc 43104 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 378,183,489 Number of extensions: 21666678 Number of successful extensions: 246579 Number of sequences better than 10.0: 120 Number of HSP's gapped: 246565 Number of HSP's successfully gapped: 200 Length of query: 2177 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2154 Effective length of database: 18,503,978,556 Effective search space: 39857569809624 Effective search space used: 39857569809624 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
