| Clone Name | FLbaf60n23 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os07g45260:12007.t04165:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed| Length = 1919 Score = 38.6 bits (78), Expect = 0.067 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 / +2 Query: 471 PSSTSVLHCRCGGRTPSPATWWLQSNGASPT 563 P+S+S C GR SP TWW + + A+PT Sbjct: 734 PTSSSSTTCGSSGRWTSPGTWWRRRSTATPT 826
>LOC_Os08g38810:12008.t03615:unspliced-genomic RAFTIN1a protein, putative, expressed| Length = 1699 Score = 30.9 bits (61), Expect(2) = 0.21 Identities = 17/45 (37%), Positives = 18/45 (40%) Frame = +1 / +3 Query: 424 RSCRPRGSLLHFRG*SPRLRPCCTVAVEDEPQAQQHGGCRVTEHR 558 R R G H R PR R V P +HGG R T HR Sbjct: 990 RGGRHEGDAAHVRVADPRRRVQVLRHVAGGPGGGRHGGARDTRHR 1124 Score = 23.5 bits (45), Expect(2) = 0.21 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 / +1 Query: 615 LRSTVPAAGAPLLPSSFVAVLNKE 686 L ST+P GAPL + AVL E Sbjct: 1129 LASTLPRGGAPLQAYAVRAVLPVE 1200
>LOC_Os08g01350:12008.t00035:unspliced-genomic transmembrane protein 18, putative, expressed| Length = 2904 Score = 34.1 bits (68), Expect = 1.6 Identities = 14/24 (58%), Positives = 14/24 (58%) Frame = +3 / +2 Query: 498 RCGGRTPSPATWWLQSNGASPTYS 569 RCG R S TWW S GASP S Sbjct: 233 RCGRR*TSTPTWWRSSLGASPPTS 304
>LOC_Os06g35590:12006.t03256:unspliced-genomic reticuline oxidase precursor, putative, expressed| Length = 2171 Score = 34.1 bits (68), Expect = 1.6 Identities = 12/28 (42%), Positives = 21/28 (75%) Frame = -2 / +2 Query: 652 SRGAPAAGTVLRSTLHHVAMLSSRCCAP 569 ++G+P+ G+VL ST+ ++ LSS+ C P Sbjct: 182 AKGSPSYGSVLTSTIRNLRYLSSKTCNP 265
>LOC_Os10g26180:12010.t02031:unspliced-genomic hypothetical protein| Length = 802 Score = 33.1 bits (66), Expect = 3.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 / -3 Query: 181 HVADTWLSSHTRPASLAAGDHALLLPP 261 HVA TW SS R ++ G H + +PP Sbjct: 578 HVAPTWQSSQQRK*KISLGPHVIHIPP 498
>LOC_Os04g40380:12004.t03602:unspliced-genomic expressed protein| Length = 923 Score = 33.1 bits (66), Expect = 3.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +3 / +2 Query: 468 KPSSTSVLHCRCGGRTPSPAT 530 + SS+S CRC GRTPS T Sbjct: 212 RSSSSSTFWCRCSGRTPSTTT 274
>LOC_Os01g25250:12001.t02243:unspliced-genomic hypothetical protein| Length = 1572 Score = 33.1 bits (66), Expect = 3.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 / -2 Query: 496 VAVEDEPQAQQHGGCRVTEHRPLTQVHS 579 + VE+ + +HGGC T H + QVHS Sbjct: 1004 MGVEEVGELMKHGGCGATMHGRVAQVHS 921
>LOC_Os02g48170:12002.t04401:unspliced-genomic groundhog protein 7, putative, expressed| Length = 1135 Score = 25.4 bits (49), Expect(2) = 3.2 Identities = 7/16 (43%), Positives = 8/16 (50%) Frame = +2 / -2 Query: 626 CTCCRGASASF*LCCC 673 C+CC G CCC Sbjct: 867 CSCCCGGCCCCCCCCC 820 Score = 24.9 bits (48), Expect(2) = 3.2 Identities = 9/21 (42%), Positives = 10/21 (47%) Frame = +3 / -3 Query: 471 PSSTSVLHCRCGGRTPSPATW 533 P TS C G TP+ TW Sbjct: 983 PPPTSAAATACTGSTPAAPTW 921
>LOC_Os02g30620:12002.t02755:unspliced-genomic dnaJ domain containing protein, expressed| Length = 4069 Score = 25.8 bits (50), Expect(2) = 3.9 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +3 / -1 Query: 810 WMCCCRLPVRSDEEL 854 W CCC L + +EEL Sbjct: 1171 WFCCCCLVDQENEEL 1127 Score = 24.0 bits (46), Expect(2) = 3.9 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = +3 / -3 Query: 732 SVTISICGNMVVCL 773 S T+SIC + ++CL Sbjct: 1337 STTVSICTSRIICL 1296
>LOC_Os01g52320:12001.t04659:unspliced-genomic NB-ARC domain containing protein, expressed| Length = 1527 Score = 29.5 bits (58), Expect(2) = 4.4 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +2 / -2 Query: 626 CTCCRGASASF*LCCC 673 C CCR S+S CCC Sbjct: 122 CNCCRRLSSSTLCCCC 75 Score = 24.0 bits (46), Expect(2) = 4.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 / -1 Query: 175 QRHVADTWLSSHTRPAS 225 Q+ VA WL+ HTR A+ Sbjct: 504 QQQVAAIWLAFHTRVAA 454
>LOC_Os06g18000:12006.t01672:unspliced-genomic protein kinase domain containing protein, expressed| Length = 1930 Score = 24.4 bits (47), Expect(3) = 5.0 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 / -1 Query: 474 SSTSVLHCRCGGRTPSPA 527 SS++ C CGG +P PA Sbjct: 391 SSSAPGACGCGGASPPPA 338 Score = 24.4 bits (47), Expect(3) = 5.0 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 / -3 Query: 729 FSVTISICGNMVVCLVTRYRTY 794 FS ++ +CG V R+RTY Sbjct: 260 FSASMYLCGTSTAPPVRRWRTY 195 Score = 23.1 bits (44), Expect(3) = 5.0 Identities = 7/12 (58%), Positives = 7/12 (58%) Frame = +1 / -2 Query: 16 PTHRPDHFTPHP 51 P H PD PHP Sbjct: 411 PDHEPDDPVPHP 376
>LOC_Os07g10120:12007.t00886:unspliced-genomic expressed protein| Length = 4623 Score = 32.2 bits (64), Expect = 5.7 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 / -1 Query: 563 SGRCSVTLQPPCCWAWGSSSTAT 495 SGRCS +P CCW G+ AT Sbjct: 327 SGRCSRWRRPTCCW**GAPGAAT 259
>LOC_Os07g10030:12007.t00877:unspliced-genomic expressed protein| Length = 4718 Score = 32.2 bits (64), Expect = 5.7 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 / -2 Query: 563 SGRCSVTLQPPCCWAWGSSSTAT 495 SGRCS +P CCW G+ AT Sbjct: 418 SGRCSRWRRPTCCW**GAPGAAT 350
>LOC_Os07g04530:12007.t00341:unspliced-genomic GYF domain containing protein, expressed| Length = 9254 Score = 32.2 bits (64), Expect = 5.7 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +2 / +1 Query: 569 RCTASRAEHSNMMESTTQYCTCCRGASASF*LCCCS 676 RC ++ ++ + + C CC +S+S CCCS Sbjct: 5224 RCNSNNKCNNKCNNNRSNDCNCCNLSSSSSSSCCCS 5331
>LOC_Os02g40900:12002.t03725:unspliced-genomic mgc10433l protein, putative, expressed| Length = 3370 Score = 24.9 bits (48), Expect(2) = 7.1 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = -1 / -3 Query: 533 PCCWAWGSSSTATVQHG 483 P CW WG TA G Sbjct: 479 PTCWTWGMG*TALYAAG 429 Score = 24.0 bits (46), Expect(2) = 7.1 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -1 / -1 Query: 443 PRGRQDRTTLDIHTCIKRNRWFPSTSPEAEETEDTRK 333 P RQ T+ +R RW STSP + T R+ Sbjct: 358 PPPRQPGTSTARTRPPRRARWTASTSPARQPTRVRRR 248
>LOC_Os10g42100:12010.t03439:unspliced-genomic pyruvate kinase isozyme G, chloroplast precursor, putative,| expressed Length = 5870 Score = 31.8 bits (63), Expect = 7.9 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = -3 / -3 Query: 600 LLCSARDAVHLSKWAMLRYSAATMLLGLG 514 LL SAR A LS+ +LR AAT LLG G Sbjct: 273 LLPSARSAATLSEVEVLRERAATALLGCG 187
>LOC_Os10g28860:12010.t02235:unspliced-genomic snRNP protein, putative| Length = 1107 Score = 31.8 bits (63), Expect = 7.9 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 / +3 Query: 430 CRPRGSLLHFRG*SPRLRPC 489 CR RG++ +G*+PR RPC Sbjct: 648 CRARGAVAGLQG*APRRRPC 707
>LOC_Os10g05780:12010.t00452:unspliced-genomic peptide transporter PTR2-B, putative, expressed| Length = 1960 Score = 31.8 bits (63), Expect = 7.9 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +3 / +3 Query: 531 WWLQSNGASPTYSGAQHLELSIAT*WRVLRSTVP 632 WW +S GASP + A + A WR S P Sbjct: 1272 WWCRSRGASPAAAAASQCSSASAPAWRRAASPWP 1373
>LOC_Os03g46760:12003.t04041:unspliced-genomic hypothetical protein| Length = 1533 Score = 31.8 bits (63), Expect = 7.9 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -1 / +3 Query: 533 PCCWAWGSSSTATVQHG 483 PCCW+W + A HG Sbjct: 1467 PCCWSWQGNGPAVATHG 1517
>LOC_Os03g22940:12003.t02041:unspliced-genomic expressed protein| Length = 852 Score = 31.8 bits (63), Expect = 7.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -2 / +1 Query: 550 PLLCSHHVAGLGVRPPQRQCSTDVDEG 470 P +HH+ RPP QCST+ G Sbjct: 505 PRHANHHMTAAAARPPYYQCSTEAVSG 585
>LOC_Os03g18970:12003.t01664:unspliced-genomic protein phosphatase 2C-like, putative, expressed| Length = 3710 Score = 31.8 bits (63), Expect = 7.9 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = -3 / +3 Query: 501 SDSAART*TRASPTKMKKRATRPTRSNNSGY 409 S SAART + +SPT RAT P S +S Y Sbjct: 414 SPSAARTTSSSSPTASASRATLPPPSPSSPY 506
>LOC_Os03g19330:12003.t01699:unspliced-genomic glycosyltransferase 3, putative, expressed| Length = 1581 Score = 26.7 bits (52), Expect(2) = 8.3 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = +3 / -2 Query: 495 CRCGGRTPSPATWWLQSNGASPTYSGAQ 578 CRC R A W SNG P S A+ Sbjct: 968 CRCVTRR*MSADWSSASNGGRPESSSAK 885 Score = 25.8 bits (50), Expect(2) = 8.3 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +3 / -2 Query: 759 MVVCLVTRYRTYRPNEAWMCCCRLPVRSDEELP 857 M + TR + W CC R RSD LP Sbjct: 113 MRITTTTRGAASLAEQRWPCCRRPARRSDVTLP 15
>LOC_Os10g37050:12010.t02978:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 1589 Score = 27.2 bits (53), Expect(2) = 8.3 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 / -1 Query: 175 QRHVADTWLSSHTRPASLAAGDHAL 249 +RH AD + H P ++AAG+ L Sbjct: 1394 ERHHADPLAARHVHPLAVAAGEEPL 1320 Score = 25.4 bits (49), Expect(2) = 8.3 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 / -2 Query: 575 TASRAEHSNMMESTTQYCTCCRGASAS 655 TA+ + HS ST + CR ASAS Sbjct: 637 TAASSSHSPKHMSTRRQNMACRNASAS 557
>LOC_Os11g31670:12011.t02764:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1641 Score = 28.1 bits (55), Expect(2) = 8.5 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 / +1 Query: 487 TDVDEGFTHENEEESHAADKIE 422 TDVDEG T +ESH A E Sbjct: 1543 TDVDEGDTAAQSDESHLAGDTE 1608 Score = 24.4 bits (47), Expect(2) = 8.5 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 / +2 Query: 601 VAMLSSRCCAPE*VG 557 V +L++RCC P VG Sbjct: 893 VCILTTRCCTPSFVG 937
>LOC_Os02g53830:12002.t04962:unspliced-genomic MTD1, putative, expressed| Length = 2714 Score = 27.2 bits (53), Expect(2) = 9.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +3 / +3 Query: 498 RCGGRTPSPATWWLQSNGASPT 563 RC RT P+T W +S SP+ Sbjct: 375 RCRARTRGPSTPWTRSRRPSPS 440 Score = 25.8 bits (50), Expect(2) = 9.8 Identities = 7/33 (21%), Positives = 18/33 (54%) Frame = +3 / +3 Query: 735 VTISICGNMVVCLVTRYRTYRPNEAWMCCCRLP 833 ++ S+C +++C + +R+ + W C +P Sbjct: 2031 LSCSMCNYLLICNIKIFRSLSLSLIWQTCLSVP 2129
>LOC_Os03g05290:12003.t00402:unspliced-genomic aquaporin TIP1.1, putative, expressed| Length = 1917 Score = 24.4 bits (47), Expect(2) = 10.0 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 / +3 Query: 606 WRVLRSTVPAAGAPLLPSS 662 WR S P AG+P PS+ Sbjct: 1191 WRASSSASPPAGSPPAPSA 1247 Score = 24.0 bits (46), Expect(2) = 10.0 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +3 / +3 Query: 471 PSSTSVLHCRCGGRTPSPATW 533 PSS + C T SP++W Sbjct: 1119 PSSAATSPCSAASSTGSPSSW 1181 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 321,312,612 Number of extensions: 4617526 Number of successful extensions: 22850 Number of sequences better than 10.0: 26 Length of query: 323 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 273 Effective length of database: 52,799,986 Effective search space: 14414396178 Effective search space used: 14414396178 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)