ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58o01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056009.1| Oryza sativa (japonica cultivar-group) Os03g0233500 (Os03g0233500) mRNA, complete cds Length = 2481 Score = 1790 bits (903), Expect = 0.0 Identities = 1386/1547 (89%) Strand = Plus / Plus Query: 11 cgaggactgccattggtcctcctcctccgtgatcaccaaggagtatctcttggcggcgca 70 |||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 404 cgaggattgccattggtcctccacctccgtgatcaccaaggaatccctcttggcggcgca 463 Query: 71 gagggaggatctcaggaaggtgatggatctgctagggttaaaggagcaccacgcaaggac 130 |||||||||||| |||||||||||||| |||||||||| | ||||||||||| |||| Sbjct: 464 gagggaggatcttaggaaggtgatggagttgctagggttgagagagcaccacgcgcggac 523 Query: 131 gcttctaattcactaccgatgggatgtggagaggatattcgagctgctcgatcagaaggg 190 ||| || || |||||| | |||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 524 gctgctcatccactacaggtgggatgtcgaaaggattttcgagctgcttgatcagaaggg 583 Query: 191 gagggataggctcttttccgaggctggtattcctctcggaaccgctaataatgccggttc 250 |||||| |||||||| || ||||||||||| |||||| | | ||||||||| |||| || Sbjct: 584 gagggacaggctcttctcggaggctggtatccctctccaacctgctaataatcccggctc 643 Query: 251 gccctctgcgacggaggtcacctgcaatgtttgctacgatgatgtgcccctctcgtccgc 310 |||||| | |||||||| ||||||||||||||||| || ||||||||||||||| ||| Sbjct: 644 gccctcctcaacggaggtaacctgcaatgtttgctatgacgatgtgcccctctcggacgc 703 Query: 311 ttcccatatggactgcggccacaactactgcaatgaatgttggacagaatatttcattgt 370 ||| | |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 704 ctccaagatggactgcggccacaactactgcaatgaatgctggacaggatatttcattgt 763 Query: 371 gaaaataaatgaggggcagagtaggcgtgtcaagtgcatggctccaaagtgcaatgccat 430 ||| ||||||||||| || || | ||| ||||||||||||||| ||||||||| | || Sbjct: 764 gaagataaatgagggacaaagccgccgtatcaagtgcatggctctgaagtgcaatactat 823 Query: 431 ctgtgatgaagcgttagtacggaagttagtaagtgcaaagcgcccagatattgctgagcg 490 |||||| ||||| |||| || ||| |||||| ||||||||| ||||||||||| ||||| Sbjct: 824 ctgtgacgaagcaatagttcgtaagctagtaaatgcaaagcggccagatattgcagagcg 883 Query: 491 ctttgaaagatttttactggaatcttatatcgaggacaatgatacagtcaagtggtgccc 550 ||||||||| || || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 884 ctttgaaaggttcttgttggaatcttatattgaggacaatgatacagtcaagtggtgccc 943 Query: 551 cagcacaccacattgtggaaatgctatacgtgtcaagggtgatattcattgcgaggtgga 610 |||||||| |||||||||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 944 aagcacaccgcattgtggaaatgctatacgcgtcaaaggtgatattcactgtgaggtgga 1003 Query: 611 atgtacatgtggacgccagttttgttttaattgctcctcagaagcacattccccttgttc 670 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1004 atgtacatgtggacgccagttttgttttaattgctcctcagaagcacattcaccatgttc 1063 Query: 671 ctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagagactgtgaattg 730 |||||||||||||||||| |||||||||||||| ||||| || |||||||| |||||||| Sbjct: 1064 ctgtgtgatgtgggagctctggatcaagaaatgccgtgacgagtcagagaccgtgaattg 1123 Query: 731 gataacagtaaatactaagccctgtcccaagtgtcataaacctgtggagaagaatggtgg 790 ||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 1124 gataacagtaaatactaagccctgtcccaagtgccacaaacctgttgagaagaacggtgg 1183 Query: 791 ctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgtggtggtgctac 850 |||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1184 ctgcaatctggttgcatgtatatgtgggcaagcattctgctggttatgcggtggtgctac 1243 Query: 851 tggtagagatcacacatggtcaagtattagcggacacagttgtggccgattcacagaaga 910 ||| |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 1244 tggcagagatcacacatggtcaagtattagtggccacagttgtggtcgattcactgaaga 1303 Query: 911 tcagtcaacgagaacagagcaagcaaggcgagacctttatcgatatatgcactaccacaa 970 |||||||| || ||||||||||| ||| || |||||||||| || |||||||||||||| Sbjct: 1304 tcagtcaaagaagacagagcaagctaggagaaacctttatcggtacatgcactaccacaa 1363 Query: 971 cagatacaaggctcatactgattctcttaagcaggaagcaaagcttaagcgcgacatcca 1030 ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1364 cagatacaaagctcacactgattctcttaagcaggaagcaaagcttaagggcgacatcca 1423 Query: 1031 gtggaagatatccatttctgaaaataaggattccaagataaaagattactcttgggtgat 1090 | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1424 ggggaagatttccatttctgaaaacaaggattccaagataaaagattactcttgggtgat 1483 Query: 1091 aaatggactgaacaggcttttcagatcaaggcgtgttctttcatattcttatccttttgc 1150 ||||||| | ||||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1484 aaatggattaaacagacttttcaggtcaaggcgggttctttcatattcttatccttttgc 1543 Query: 1151 attctacatgtttggtgatgagattttcaaggatgagatgactcctgaggaaagagaact 1210 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1544 attctacatgtttggtgatgagattttcaaggatgagatgacttctgatgaaagagaact 1603 Query: 1211 caagcagaatctgtttgaggatcagcaacaacaattagagttcaatgttgaaaggttatc 1270 ||||| || || |||||||| || |||||||||||||| ||||| |||||||| |||| Sbjct: 1604 aaagcaaaacctatttgaggaccaacaacaacaattagaattcaacgttgaaagactatc 1663 Query: 1271 tggcttccttgagaaggattttcaaaattttagcgacgaggaggttatggatacaatgaa 1330 ||| |||||||||| |||||||||||||||||| || || |||||||||||||||||||| Sbjct: 1664 tggtttccttgagagggattttcaaaattttagtgatgatgaggttatggatacaatgaa 1723 Query: 1331 gcatgttatcaatctttccaatgtggtagataggctctgcaagcaaatgtatcagtgcat 1390 |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1724 gcatgtcatcaatctttccaatgtggttgatagactctgcaagcaaatgtatcagtgcat 1783 Query: 1391 tgagaatgatttgttgtaccctctccgcacgcctcataatattgccccatacaaatccaa 1450 |||||||||||||||||| || || || ||||||||||||||||| |||||||||||||| Sbjct: 1784 tgagaatgatttgttgtatccactgcgtacgcctcataatattgctccatacaaatccaa 1843 Query: 1451 gggtctcgatagagcatcagagctccatattagtttggactctgctgaacaaagttcgcc 1510 ||| || || || || ||||||||| || || ||| ||| ||| |||||||| ||| || Sbjct: 1844 gggccttgacagggcctcagagctcaatgtttgttgggattcttctgaacaaggtttgca 1903 Query: 1511 atctatgaaatgtagtcaggatgaacacaagagtcaacctggtttat 1557 | | || |||| ||||| ||||||||||||||||| |||||||||| Sbjct: 1904 accaattaaatacagtcaagatgaacacaagagtcagcctggtttat 1950 Score = 109 bits (55), Expect = 4e-20 Identities = 133/159 (83%) Strand = Plus / Plus Query: 1642 ctcacaagagagaaagaagagatgctcatggcggcggtgctctttttgatctcaacgtgc 1701 |||||||| ||||||||| ||||| ||||| || | ||| |||||||| ||||| |||| Sbjct: 2011 ctcacaagcgagaaagaaatgatgcccatggtggggctgccctttttgacctcaatgtgc 2070 Query: 1702 cagccgaagtggcggacaagatctgaagctccagtatctgacggaacattccgctgcaac 1761 |||| |||||||| |||||||| |||| || | || || || | |||||||| ||||| Sbjct: 2071 cagctgaagtggcagacaagatatgaaacttaaataacttacagcacattccgttgcaag 2130 Query: 1762 tgtacagctgacctgtgtttcttcagctacataaaggaa 1800 ||||||||||||| | | ||||||||||||||||||||| Sbjct: 2131 tgtacagctgacccgggcttcttcagctacataaaggaa 2169
>dbj|AK073139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023K06, full insert sequence Length = 2482 Score = 1782 bits (899), Expect = 0.0 Identities = 1385/1547 (89%) Strand = Plus / Plus Query: 11 cgaggactgccattggtcctcctcctccgtgatcaccaaggagtatctcttggcggcgca 70 |||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 405 cgaggattgccattggtcctccacctccgtgatcaccaaggaatccctcttggcggcgca 464 Query: 71 gagggaggatctcaggaaggtgatggatctgctagggttaaaggagcaccacgcaaggac 130 |||||||||||| |||||||||||||| |||||||||| | ||||||||||| |||| Sbjct: 465 gagggaggatcttaggaaggtgatggagttgctagggttgagagagcaccacgcgcggac 524 Query: 131 gcttctaattcactaccgatgggatgtggagaggatattcgagctgctcgatcagaaggg 190 ||| || || |||||| | |||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 525 gctgctcatccactacaggtgggatgtcgaaaggattttcgagctgcttgatcagaaggg 584 Query: 191 gagggataggctcttttccgaggctggtattcctctcggaaccgctaataatgccggttc 250 |||||| |||||||| || ||||||||||| |||||| | | ||||||||| |||| || Sbjct: 585 gagggacaggctcttctcggaggctggtatccctctccaacctgctaataatcccggctc 644 Query: 251 gccctctgcgacggaggtcacctgcaatgtttgctacgatgatgtgcccctctcgtccgc 310 |||||| | |||||||| ||||||||||||||||| || ||||||||||||||| ||| Sbjct: 645 gccctcctcaacggaggtaacctgcaatgtttgctatgacgatgtgcccctctcggacgc 704 Query: 311 ttcccatatggactgcggccacaactactgcaatgaatgttggacagaatatttcattgt 370 ||| | |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 705 ctccaagatggactgcggccacaactactgcaatgaatgctggacaggatatttcattgt 764 Query: 371 gaaaataaatgaggggcagagtaggcgtgtcaagtgcatggctccaaagtgcaatgccat 430 ||| ||||||||||| || || | ||| ||||||||||||||| ||||||||| | || Sbjct: 765 gaagataaatgagggacaaagccgccgtatcaagtgcatggctctgaagtgcaatactat 824 Query: 431 ctgtgatgaagcgttagtacggaagttagtaagtgcaaagcgcccagatattgctgagcg 490 |||||| ||||| |||| || ||| |||||| ||||||||| ||||||||||| ||||| Sbjct: 825 ctgtgacgaagcaatagtccgtaagctagtaaatgcaaagcggccagatattgcagagcg 884 Query: 491 ctttgaaagatttttactggaatcttatatcgaggacaatgatacagtcaagtggtgccc 550 ||||||||| || || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 885 ctttgaaaggttcttgttggaatcttatattgaggacaatgatacagtcaagtggtgccc 944 Query: 551 cagcacaccacattgtggaaatgctatacgtgtcaagggtgatattcattgcgaggtgga 610 |||||||| |||||||||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 945 aagcacaccgcattgtggaaatgctatacgcgtcaaaggtgatattcactgtgaggtgga 1004 Query: 611 atgtacatgtggacgccagttttgttttaattgctcctcagaagcacattccccttgttc 670 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1005 atgtacatgtggacgccagttttgttttaattgctcctcagaagcacattcaccatgttc 1064 Query: 671 ctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagagactgtgaattg 730 |||||||||||||||||| |||||||||||||| ||||| || |||||||| |||||||| Sbjct: 1065 ctgtgtgatgtgggagctctggatcaagaaatgccgtgacgagtcagagaccgtgaattg 1124 Query: 731 gataacagtaaatactaagccctgtcccaagtgtcataaacctgtggagaagaatggtgg 790 ||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 1125 gataacagtaaatactaagccctgtcccaagtgccacaaacctgttgagaagaacggtgg 1184 Query: 791 ctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgtggtggtgctac 850 |||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1185 ctgcaatctggttgcatgtatatgtgggcaagcattctgctggttatgcggtggtgctac 1244 Query: 851 tggtagagatcacacatggtcaagtattagcggacacagttgtggccgattcacagaaga 910 ||| |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 1245 tggcagagatcacacatggtcaagtattagtggccacagttgtggtcgattcactgaaga 1304 Query: 911 tcagtcaacgagaacagagcaagcaaggcgagacctttatcgatatatgcactaccacaa 970 |||||||| || ||||||||||| ||| || |||||||||| || |||||||||||||| Sbjct: 1305 tcagtcaaagaagacagagcaagctaggagaaacctttatcggtacatgcactaccacaa 1364 Query: 971 cagatacaaggctcatactgattctcttaagcaggaagcaaagcttaagcgcgacatcca 1030 ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1365 cagatacaaagctcacactgattctcttaagcaggaagcaaagcttaagggcgacatcca 1424 Query: 1031 gtggaagatatccatttctgaaaataaggattccaagataaaagattactcttgggtgat 1090 | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1425 ggggaagatttccatttctgaaaacaaggattccaagataaaagattactcttgggtgat 1484 Query: 1091 aaatggactgaacaggcttttcagatcaaggcgtgttctttcatattcttatccttttgc 1150 ||||||| | ||||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1485 aaatggattaaacagacttttcaggtcaaggcgggttctttcatattcttatccttttgc 1544 Query: 1151 attctacatgtttggtgatgagattttcaaggatgagatgactcctgaggaaagagaact 1210 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1545 attctacatgtttggtgatgagattttcaaggatgagatgacttctgatgaaagagaact 1604 Query: 1211 caagcagaatctgtttgaggatcagcaacaacaattagagttcaatgttgaaaggttatc 1270 ||||| || || |||||||| || |||||||||||||| ||||| |||||||| |||| Sbjct: 1605 aaagcaaaacctatttgaggaccaacaacaacaattagaattcaacgttgaaagactatc 1664 Query: 1271 tggcttccttgagaaggattttcaaaattttagcgacgaggaggttatggatacaatgaa 1330 ||| |||||||||| |||||||||||||||||| || || |||||||||||||||||||| Sbjct: 1665 tggtttccttgagagggattttcaaaattttagtgatgatgaggttatggatacaatgaa 1724 Query: 1331 gcatgttatcaatctttccaatgtggtagataggctctgcaagcaaatgtatcagtgcat 1390 |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1725 gcatgtcatcaatctttccaatgtggttgatagactctgcaagcaaatgtatcagtgcat 1784 Query: 1391 tgagaatgatttgttgtaccctctccgcacgcctcataatattgccccatacaaatccaa 1450 |||||||||||||||||| || || || ||||||||||||||||| |||||||||||||| Sbjct: 1785 tgagaatgatttgttgtatccactgcgtacgcctcataatattgctccatacaaatccaa 1844 Query: 1451 gggtctcgatagagcatcagagctccatattagtttggactctgctgaacaaagttcgcc 1510 ||| || || || || ||||||||| || || ||| ||| ||| |||||||| ||| || Sbjct: 1845 gggccttgacagggcctcagagctcaatgtttgttgggattcttctgaacaaggtttgca 1904 Query: 1511 atctatgaaatgtagtcaggatgaacacaagagtcaacctggtttat 1557 | | || || | ||||| ||||||||||||||||| |||||||||| Sbjct: 1905 accaattaactacagtcaagatgaacacaagagtcagcctggtttat 1951 Score = 109 bits (55), Expect = 4e-20 Identities = 133/159 (83%) Strand = Plus / Plus Query: 1642 ctcacaagagagaaagaagagatgctcatggcggcggtgctctttttgatctcaacgtgc 1701 |||||||| ||||||||| ||||| ||||| || | ||| |||||||| ||||| |||| Sbjct: 2012 ctcacaagcgagaaagaaatgatgcccatggtggggttgccctttttgacctcaatgtgc 2071 Query: 1702 cagccgaagtggcggacaagatctgaagctccagtatctgacggaacattccgctgcaac 1761 |||| |||||||| |||||||| |||| || | || || || | |||||||| ||||| Sbjct: 2072 cagctgaagtggcagacaagatatgaaacttaaataacttacagcacattccgttgcaag 2131 Query: 1762 tgtacagctgacctgtgtttcttcagctacataaaggaa 1800 ||||||||||||| | | ||||||||||||||||||||| Sbjct: 2132 tgtacagctgacccgggcttcttcagctacataaaggaa 2170
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 735 bits (371), Expect = 0.0 Identities = 506/551 (91%) Strand = Plus / Minus Query: 831 tggttatgtggtggtgctactggtagagatcacacatggtcaagtattagcggacacagt 890 |||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 35316 tggttatgcggtggtgctactggcagagatcacacatggtcaagtattagtggccacagt 35257 Query: 891 tgtggccgattcacagaagatcagtcaacgagaacagagcaagcaaggcgagacctttat 950 ||||| |||||||| ||||||||||||| || ||||||||||| ||| || |||||||| Sbjct: 35256 tgtggtcgattcactgaagatcagtcaaagaagacagagcaagctaggagaaacctttat 35197 Query: 951 cgatatatgcactaccacaacagatacaaggctcatactgattctcttaagcaggaagca 1010 || || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 35196 cggtacatgcactaccacaacagatacaaagctcacactgattctcttaagcaggaagca 35137 Query: 1011 aagcttaagcgcgacatccagtggaagatatccatttctgaaaataaggattccaagata 1070 ||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||| Sbjct: 35136 aagcttaagggcgacatccaggggaagatttccatttctgaaaacaaggattccaagata 35077 Query: 1071 aaagattactcttgggtgataaatggactgaacaggcttttcagatcaaggcgtgttctt 1130 ||||||||||||||||||||||||||| | ||||| |||||||| |||||||| |||||| Sbjct: 35076 aaagattactcttgggtgataaatggattaaacagacttttcaggtcaaggcgggttctt 35017 Query: 1131 tcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatgagatg 1190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35016 tcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatgagatg 34957 Query: 1191 actcctgaggaaagagaactcaagcagaatctgtttgaggatcagcaacaacaattagag 1250 ||| |||| ||||||||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 34956 acttctgatgaaagagaactaaagcaaaacctatttgaggaccaacaacaacaattagaa 34897 Query: 1251 ttcaatgttgaaaggttatctggcttccttgagaaggattttcaaaattttagcgacgag 1310 ||||| |||||||| ||||||| |||||||||| |||||||||||||||||| || || Sbjct: 34896 ttcaacgttgaaagactatctggtttccttgagagggattttcaaaattttagtgatgat 34837 Query: 1311 gaggttatggatacaatgaagcatgttatcaatctttccaatgtggtagataggctctgc 1370 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 34836 gaggttatggatacaatgaagcatgtcatcaatctttccaatgtggttgatagactctgc 34777 Query: 1371 aagcaaatgta 1381 ||||||||||| Sbjct: 34776 aagcaaatgta 34766 Score = 593 bits (299), Expect = e-165 Identities = 434/479 (90%) Strand = Plus / Minus Query: 351 tggacagaatatttcattgtgaaaataaatgaggggcagagtaggcgtgtcaagtgcatg 410 ||||||| ||||||||||||||| ||||||||||| || || | ||| ||||||||||| Sbjct: 36507 tggacaggatatttcattgtgaagataaatgagggacaaagccgccgtatcaagtgcatg 36448 Query: 411 gctccaaagtgcaatgccatctgtgatgaagcgttagtacggaagttagtaagtgcaaag 470 |||| ||||||||| | |||||||| ||||| |||| || ||| |||||| ||||||| Sbjct: 36447 gctctgaagtgcaatactatctgtgacgaagcaatagttcgtaagctagtaaatgcaaag 36388 Query: 471 cgcccagatattgctgagcgctttgaaagatttttactggaatcttatatcgaggacaat 530 || ||||||||||| |||||||||||||| || || ||||||||||||| ||||||||| Sbjct: 36387 cggccagatattgcagagcgctttgaaaggttcttgttggaatcttatattgaggacaat 36328 Query: 531 gatacagtcaagtggtgccccagcacaccacattgtggaaatgctatacgtgtcaagggt 590 |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||| Sbjct: 36327 gatacagtcaagtggtgcccaagcacaccgcattgtggaaatgctatacgcgtcaaaggt 36268 Query: 591 gatattcattgcgaggtggaatgtacatgtggacgccagttttgttttaattgctcctca 650 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36267 gatattcactgtgaggtggaatgtacatgtggacgccagttttgttttaattgctcctca 36208 Query: 651 gaagcacattccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgat 710 ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 36207 gaagcacattcaccatgttcctgtgtgatgtgggagctctggatcaagaaatgccgtgac 36148 Query: 711 gaatcagagactgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaa 770 || |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 36147 gagtcagagaccgtgaattggataacagtaaatactaagccctgtcccaagtgccacaaa 36088 Query: 771 cctgtggagaagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctg 829 ||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 36087 cctgttgagaagaacggtggctgcaatctggttgcatgtatatgtgggcaagcattctg 36029 Score = 260 bits (131), Expect = 2e-65 Identities = 245/283 (86%) Strand = Plus / Minus Query: 68 gcagagggaggatctcaggaaggtgatggatctgctagggttaaaggagcaccacgcaag 127 ||||||||||||||| |||||||||||||| |||||||||| | ||||||||||| | Sbjct: 37400 gcagagggaggatcttaggaaggtgatggagttgctagggttgagagagcaccacgcgcg 37341 Query: 128 gacgcttctaattcactaccgatgggatgtggagaggatattcgagctgctcgatcagaa 187 |||||| || || |||||| | |||||||| || ||||| ||||||||||| |||||||| Sbjct: 37340 gacgctgctcatccactacaggtgggatgtcgaaaggattttcgagctgcttgatcagaa 37281 Query: 188 ggggagggataggctcttttccgaggctggtattcctctcggaaccgctaataatgccgg 247 ||||||||| |||||||| || ||||||||||| |||||| | | ||||||||| |||| Sbjct: 37280 ggggagggacaggctcttctcggaggctggtatccctctccaacctgctaataatcccgg 37221 Query: 248 ttcgccctctgcgacggaggtcacctgcaatgtttgctacgatgatgtgcccctctcgtc 307 |||||||| | |||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 37220 ctcgccctcctcaacggaggtaacctgcaatgtttgctatgacgatgtgcccctctcgga 37161 Query: 308 cgcttcccatatggactgcggccacaactactgcaatgaatgt 350 ||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 37160 cgcctccaagatggactgcggccacaactactgcaatgaatgt 37118 Score = 149 bits (75), Expect = 5e-32 Identities = 153/179 (85%) Strand = Plus / Minus Query: 1379 gtatcagtgcattgagaatgatttgttgtaccctctccgcacgcctcataatattgcccc 1438 |||||||||||||||||||||||||||||| || || || ||||||||||||||||| || Sbjct: 34704 gtatcagtgcattgagaatgatttgttgtatccactgcgtacgcctcataatattgctcc 34645 Query: 1439 atacaaatccaagggtctcgatagagcatcagagctccatattagtttggactctgctga 1498 ||||||||||||||| || || || || ||||||||| || || ||| ||| ||| |||| Sbjct: 34644 atacaaatccaagggccttgacagggcctcagagctcaatgtttgttgggattcttctga 34585 Query: 1499 acaaagttcgccatctatgaaatgtagtcaggatgaacacaagagtcaacctggtttat 1557 |||| ||| || | | || |||| ||||| ||||||||||||||||| |||||||||| Sbjct: 34584 acaaggtttgcaaccaattaaatacagtcaagatgaacacaagagtcagcctggtttat 34526 Score = 109 bits (55), Expect = 4e-20 Identities = 133/159 (83%) Strand = Plus / Minus Query: 1642 ctcacaagagagaaagaagagatgctcatggcggcggtgctctttttgatctcaacgtgc 1701 |||||||| ||||||||| ||||| ||||| || | ||| |||||||| ||||| |||| Sbjct: 34379 ctcacaagcgagaaagaaatgatgcccatggtggggctgccctttttgacctcaatgtgc 34320 Query: 1702 cagccgaagtggcggacaagatctgaagctccagtatctgacggaacattccgctgcaac 1761 |||| |||||||| |||||||| |||| || | || || || | |||||||| ||||| Sbjct: 34319 cagctgaagtggcagacaagatatgaaacttaaataacttacagcacattccgttgcaag 34260 Query: 1762 tgtacagctgacctgtgtttcttcagctacataaaggaa 1800 ||||||||||||| | | ||||||||||||||||||||| Sbjct: 34259 tgtacagctgacccgggcttcttcagctacataaaggaa 34221 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 11 cgaggactgccattggtcctcctcctccgt 40 |||||| ||||||||||||||| ||||||| Sbjct: 37681 cgaggattgccattggtcctccacctccgt 37652 Score = 42.1 bits (21), Expect = 7.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 gtgatcaccaaggagtatctcttggcggcgcag 71 |||||||||||||| | ||||||||||||||| Sbjct: 37560 gtgatcaccaaggaatccctcttggcggcgcag 37528
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 735 bits (371), Expect = 0.0 Identities = 506/551 (91%) Strand = Plus / Plus Query: 831 tggttatgtggtggtgctactggtagagatcacacatggtcaagtattagcggacacagt 890 |||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 7044944 tggttatgcggtggtgctactggcagagatcacacatggtcaagtattagtggccacagt 7045003 Query: 891 tgtggccgattcacagaagatcagtcaacgagaacagagcaagcaaggcgagacctttat 950 ||||| |||||||| ||||||||||||| || ||||||||||| ||| || |||||||| Sbjct: 7045004 tgtggtcgattcactgaagatcagtcaaagaagacagagcaagctaggagaaacctttat 7045063 Query: 951 cgatatatgcactaccacaacagatacaaggctcatactgattctcttaagcaggaagca 1010 || || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 7045064 cggtacatgcactaccacaacagatacaaagctcacactgattctcttaagcaggaagca 7045123 Query: 1011 aagcttaagcgcgacatccagtggaagatatccatttctgaaaataaggattccaagata 1070 ||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||| Sbjct: 7045124 aagcttaagggcgacatccaggggaagatttccatttctgaaaacaaggattccaagata 7045183 Query: 1071 aaagattactcttgggtgataaatggactgaacaggcttttcagatcaaggcgtgttctt 1130 ||||||||||||||||||||||||||| | ||||| |||||||| |||||||| |||||| Sbjct: 7045184 aaagattactcttgggtgataaatggattaaacagacttttcaggtcaaggcgggttctt 7045243 Query: 1131 tcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatgagatg 1190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7045244 tcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatgagatg 7045303 Query: 1191 actcctgaggaaagagaactcaagcagaatctgtttgaggatcagcaacaacaattagag 1250 ||| |||| ||||||||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 7045304 acttctgatgaaagagaactaaagcaaaacctatttgaggaccaacaacaacaattagaa 7045363 Query: 1251 ttcaatgttgaaaggttatctggcttccttgagaaggattttcaaaattttagcgacgag 1310 ||||| |||||||| ||||||| |||||||||| |||||||||||||||||| || || Sbjct: 7045364 ttcaacgttgaaagactatctggtttccttgagagggattttcaaaattttagtgatgat 7045423 Query: 1311 gaggttatggatacaatgaagcatgttatcaatctttccaatgtggtagataggctctgc 1370 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 7045424 gaggttatggatacaatgaagcatgtcatcaatctttccaatgtggttgatagactctgc 7045483 Query: 1371 aagcaaatgta 1381 ||||||||||| Sbjct: 7045484 aagcaaatgta 7045494 Score = 593 bits (299), Expect = e-165 Identities = 434/479 (90%) Strand = Plus / Plus Query: 351 tggacagaatatttcattgtgaaaataaatgaggggcagagtaggcgtgtcaagtgcatg 410 ||||||| ||||||||||||||| ||||||||||| || || | ||| ||||||||||| Sbjct: 7043753 tggacaggatatttcattgtgaagataaatgagggacaaagccgccgtatcaagtgcatg 7043812 Query: 411 gctccaaagtgcaatgccatctgtgatgaagcgttagtacggaagttagtaagtgcaaag 470 |||| ||||||||| | |||||||| ||||| |||| || ||| |||||| ||||||| Sbjct: 7043813 gctctgaagtgcaatactatctgtgacgaagcaatagttcgtaagctagtaaatgcaaag 7043872 Query: 471 cgcccagatattgctgagcgctttgaaagatttttactggaatcttatatcgaggacaat 530 || ||||||||||| |||||||||||||| || || ||||||||||||| ||||||||| Sbjct: 7043873 cggccagatattgcagagcgctttgaaaggttcttgttggaatcttatattgaggacaat 7043932 Query: 531 gatacagtcaagtggtgccccagcacaccacattgtggaaatgctatacgtgtcaagggt 590 |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||| Sbjct: 7043933 gatacagtcaagtggtgcccaagcacaccgcattgtggaaatgctatacgcgtcaaaggt 7043992 Query: 591 gatattcattgcgaggtggaatgtacatgtggacgccagttttgttttaattgctcctca 650 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7043993 gatattcactgtgaggtggaatgtacatgtggacgccagttttgttttaattgctcctca 7044052 Query: 651 gaagcacattccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgat 710 ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 7044053 gaagcacattcaccatgttcctgtgtgatgtgggagctctggatcaagaaatgccgtgac 7044112 Query: 711 gaatcagagactgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaa 770 || |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 7044113 gagtcagagaccgtgaattggataacagtaaatactaagccctgtcccaagtgccacaaa 7044172 Query: 771 cctgtggagaagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctg 829 ||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 7044173 cctgttgagaagaacggtggctgcaatctggttgcatgtatatgtgggcaagcattctg 7044231 Score = 260 bits (131), Expect = 2e-65 Identities = 245/283 (86%) Strand = Plus / Plus Query: 68 gcagagggaggatctcaggaaggtgatggatctgctagggttaaaggagcaccacgcaag 127 ||||||||||||||| |||||||||||||| |||||||||| | ||||||||||| | Sbjct: 7042860 gcagagggaggatcttaggaaggtgatggagttgctagggttgagagagcaccacgcgcg 7042919 Query: 128 gacgcttctaattcactaccgatgggatgtggagaggatattcgagctgctcgatcagaa 187 |||||| || || |||||| | |||||||| || ||||| ||||||||||| |||||||| Sbjct: 7042920 gacgctgctcatccactacaggtgggatgtcgaaaggattttcgagctgcttgatcagaa 7042979 Query: 188 ggggagggataggctcttttccgaggctggtattcctctcggaaccgctaataatgccgg 247 ||||||||| |||||||| || ||||||||||| |||||| | | ||||||||| |||| Sbjct: 7042980 ggggagggacaggctcttctcggaggctggtatccctctccaacctgctaataatcccgg 7043039 Query: 248 ttcgccctctgcgacggaggtcacctgcaatgtttgctacgatgatgtgcccctctcgtc 307 |||||||| | |||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 7043040 ctcgccctcctcaacggaggtaacctgcaatgtttgctatgacgatgtgcccctctcgga 7043099 Query: 308 cgcttcccatatggactgcggccacaactactgcaatgaatgt 350 ||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 7043100 cgcctccaagatggactgcggccacaactactgcaatgaatgt 7043142 Score = 149 bits (75), Expect = 5e-32 Identities = 153/179 (85%) Strand = Plus / Plus Query: 1379 gtatcagtgcattgagaatgatttgttgtaccctctccgcacgcctcataatattgcccc 1438 |||||||||||||||||||||||||||||| || || || ||||||||||||||||| || Sbjct: 7045556 gtatcagtgcattgagaatgatttgttgtatccactgcgtacgcctcataatattgctcc 7045615 Query: 1439 atacaaatccaagggtctcgatagagcatcagagctccatattagtttggactctgctga 1498 ||||||||||||||| || || || || ||||||||| || || ||| ||| ||| |||| Sbjct: 7045616 atacaaatccaagggccttgacagggcctcagagctcaatgtttgttgggattcttctga 7045675 Query: 1499 acaaagttcgccatctatgaaatgtagtcaggatgaacacaagagtcaacctggtttat 1557 |||| ||| || | | || |||| ||||| ||||||||||||||||| |||||||||| Sbjct: 7045676 acaaggtttgcaaccaattaaatacagtcaagatgaacacaagagtcagcctggtttat 7045734 Score = 109 bits (55), Expect = 4e-20 Identities = 133/159 (83%) Strand = Plus / Plus Query: 1642 ctcacaagagagaaagaagagatgctcatggcggcggtgctctttttgatctcaacgtgc 1701 |||||||| ||||||||| ||||| ||||| || | ||| |||||||| ||||| |||| Sbjct: 7045881 ctcacaagcgagaaagaaatgatgcccatggtggggctgccctttttgacctcaatgtgc 7045940 Query: 1702 cagccgaagtggcggacaagatctgaagctccagtatctgacggaacattccgctgcaac 1761 |||| |||||||| |||||||| |||| || | || || || | |||||||| ||||| Sbjct: 7045941 cagctgaagtggcagacaagatatgaaacttaaataacttacagcacattccgttgcaag 7046000 Query: 1762 tgtacagctgacctgtgtttcttcagctacataaaggaa 1800 ||||||||||||| | | ||||||||||||||||||||| Sbjct: 7046001 tgtacagctgacccgggcttcttcagctacataaaggaa 7046039 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 11 cgaggactgccattggtcctcctcctccgt 40 |||||| ||||||||||||||| ||||||| Sbjct: 7042579 cgaggattgccattggtcctccacctccgt 7042608 Score = 42.1 bits (21), Expect = 7.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 39 gtgatcaccaaggagtatctcttggcggcgcag 71 |||||||||||||| | ||||||||||||||| Sbjct: 7042700 gtgatcaccaaggaatccctcttggcggcgcag 7042732
>gb|AY106666.1| Zea mays PCO121106 mRNA sequence Length = 614 Score = 212 bits (107), Expect = 4e-51 Identities = 170/191 (89%) Strand = Plus / Plus Query: 1317 atggatacaatgaagcatgttatcaatctttccaatgtggtagataggctctgcaagcaa 1376 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 4 atggatacaatgaagcatgtcatcaatctttccaatgtggttgataggctctgcaaacaa 63 Query: 1377 atgtatcagtgcattgagaatgatttgttgtaccctctccgcacgcctcataatattgcc 1436 ||||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||| || Sbjct: 64 atgtatcagtgcattgagaatgatttgttatatcctctacgcacacctcacaatatcgct 123 Query: 1437 ccatacaaatccaagggtctcgatagagcatcagagctccatattagtttggactctgct 1496 ||||||||||| ||||| || || || || ||||||||| ||||||| | ||| ||||| Sbjct: 124 ccatacaaatctaagggccttgacagggcctcagagctcaatattagctgggatcctgct 183 Query: 1497 gaacaaagttc 1507 ||||||||||| Sbjct: 184 gaacaaagttc 194 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 1683 ctttttgatctcaacgtgccagccgaagtggcggacaagatctgaagctccagtatctga 1742 |||||||||||||| |||||||||||| ||| ||||||||||||||||| || ||||||| Sbjct: 367 ctttttgatctcaatgtgccagccgaattggtggacaagatctgaagcttcattatctga 426
>ref|NM_119602.1| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT4G34370) mRNA, complete cds Length = 2280 Score = 125 bits (63), Expect = 7e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 |||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||| Sbjct: 1418 ttcagatcaaggcgagttctttcatattcgtatgcttttgcatattatatgtttggtgaa 1477 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||||| || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 1478 gagatgtttaaagatgagatgacccctgaggagagagagataaagaagaatttgtttgag 1537 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 1538 gatcagcagcaacaa 1552 Score = 60.0 bits (30), Expect = 3e-05 Identities = 162/206 (78%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||| | |||| ||||| ||||| ||||| || ||| Sbjct: 968 tccccttgctcttgtttgatgtgggagttatggagaaagaagtgtcgagatgagtctgag 1027 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || | || |||||||| || | || |||| |||||||| ||| | ||||||||||| Sbjct: 1028 acaatcaactggataaccgttcacacaaagctgtgtcccaaatgttacaaacctgtggaa 1087 Query: 780 aagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgt 839 ||||||||||| ||||| || || ||||| ||||| || || |||||| ||||| Sbjct: 1088 aagaatggtggatgcaatctcgtgaggtgtatttgtgggcagtgtttttgttggctatgt 1147 Query: 840 ggtggtgctactggtagagatcacac 865 ||||| |||||||| || |||||||| Sbjct: 1148 ggtggagctactggaagtgatcacac 1173 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 109 taaaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||||| Sbjct: 411 taaaggagcaccatgcacggactcttcttattcattaccagtgggatgtggaga 464 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 537 gtcaagtggtgccccagcacaccacattgtggaaatgctatacg 580 ||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 845 gtcaagtggtgtcctagcactccgcattgtgggaatgctatacg 888 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1365 ctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||||||| ||||||| |||||||||||||||| Sbjct: 1673 ctctgcaagaaaatgtacgagtgcattgagaatga 1707
>gb|AY117264.1| Arabidopsis thaliana unknown protein (At4g34370) mRNA, complete cds Length = 1825 Score = 125 bits (63), Expect = 7e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 |||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||| Sbjct: 1204 ttcagatcaaggcgagttctttcatattcgtatgcttttgcatattatatgtttggtgaa 1263 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||||| || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 1264 gagatgtttaaagatgagatgacccctgaggagagagagataaagaagaatttgtttgag 1323 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 1324 gatcagcagcaacaa 1338 Score = 60.0 bits (30), Expect = 3e-05 Identities = 162/206 (78%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||| | |||| ||||| ||||| ||||| || ||| Sbjct: 754 tccccttgctcttgtttgatgtgggagttatggagaaagaagtgtcgagatgagtctgag 813 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || | || |||||||| || | || |||| |||||||| ||| | ||||||||||| Sbjct: 814 acaatcaactggataaccgttcacacaaagctgtgtcccaaatgttacaaacctgtggaa 873 Query: 780 aagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgt 839 ||||||||||| ||||| || || ||||| ||||| || || |||||| ||||| Sbjct: 874 aagaatggtggatgcaatctcgtgaggtgtatttgtgggcagtgtttttgttggctatgt 933 Query: 840 ggtggtgctactggtagagatcacac 865 ||||| |||||||| || |||||||| Sbjct: 934 ggtggagctactggaagtgatcacac 959 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 109 taaaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||||| Sbjct: 197 taaaggagcaccatgcacggactcttcttattcattaccagtgggatgtggaga 250 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 537 gtcaagtggtgccccagcacaccacattgtggaaatgctatacg 580 ||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 631 gtcaagtggtgtcctagcactccgcattgtgggaatgctatacg 674 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1365 ctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||||||| ||||||| |||||||||||||||| Sbjct: 1459 ctctgcaagaaaatgtacgagtgcattgagaatga 1493
>gb|AY050864.1| Arabidopsis thaliana unknown protein (At4g34370) mRNA, complete cds Length = 2296 Score = 125 bits (63), Expect = 7e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 |||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||| Sbjct: 1418 ttcagatcaaggcgagttctttcatattcgtatgcttttgcatattatatgtttggtgaa 1477 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||||| || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 1478 gagatgtttaaagatgagatgacccctgaggagagagagataaagaagaatttgtttgag 1537 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 1538 gatcagcagcaacaa 1552 Score = 60.0 bits (30), Expect = 3e-05 Identities = 162/206 (78%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||| | |||| ||||| ||||| ||||| || ||| Sbjct: 968 tccccttgctcttgtttgatgtgggagttatggagaaagaagtgtcgagatgagtctgag 1027 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || | || |||||||| || | || |||| |||||||| ||| | ||||||||||| Sbjct: 1028 acaatcaactggataaccgttcacacaaagctgtgtcccaaatgttacaaacctgtggaa 1087 Query: 780 aagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgt 839 ||||||||||| ||||| || || ||||| ||||| || || |||||| ||||| Sbjct: 1088 aagaatggtggatgcaatctcgtgaggtgtatttgtgggcagtgtttttgttggctatgt 1147 Query: 840 ggtggtgctactggtagagatcacac 865 ||||| |||||||| || |||||||| Sbjct: 1148 ggtggagctactggaagtgatcacac 1173 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 109 taaaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||||| Sbjct: 411 taaaggagcaccatgcacggactcttcttattcattaccagtgggatgtggaga 464 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 537 gtcaagtggtgccccagcacaccacattgtggaaatgctatacg 580 ||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 845 gtcaagtggtgtcctagcactccgcattgtgggaatgctatacg 888 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1365 ctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||||||| ||||||| |||||||||||||||| Sbjct: 1673 ctctgcaagaaaatgtacgagtgcattgagaatga 1707
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 125 bits (63), Expect = 7e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 |||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||| Sbjct: 82054 ttcagatcaaggcgagttctttcatattcgtatgcttttgcatattatatgtttggtgaa 82113 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||||| || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 82114 gagatgtttaaagatgagatgacccctgaggagagagagataaagaagaatttgtttgag 82173 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 82174 gatcagcagcaacaa 82188 Score = 58.0 bits (29), Expect = 1e-04 Identities = 110/137 (80%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||| | |||| ||||| ||||| ||||| || ||| Sbjct: 81476 tccccttgctcttgtttgatgtgggagttatggagaaagaagtgtcgagatgagtctgag 81535 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || | || |||||||| || | || |||| |||||||| ||| | ||||||||||| Sbjct: 81536 acaatcaactggataaccgttcacacaaagctgtgtcccaaatgttacaaacctgtggaa 81595 Query: 780 aagaatggtggctgcaa 796 ||||||||||| ||||| Sbjct: 81596 aagaatggtggatgcaa 81612 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 109 taaaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||||| Sbjct: 80847 taaaggagcaccatgcacggactcttcttattcattaccagtgggatgtggaga 80900 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 537 gtcaagtggtgccccagcacaccacattgtggaaatgctatacg 580 ||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 81353 gtcaagtggtgtcctagcactccgcattgtgggaatgctatacg 81396 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1365 ctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||||||| ||||||| |||||||||||||||| Sbjct: 82309 ctctgcaagaaaatgtacgagtgcattgagaatga 82343
>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project) Length = 114367 Score = 125 bits (63), Expect = 7e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 |||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||| Sbjct: 73535 ttcagatcaaggcgagttctttcatattcgtatgcttttgcatattatatgtttggtgaa 73594 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||||| || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 73595 gagatgtttaaagatgagatgacccctgaggagagagagataaagaagaatttgtttgag 73654 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 73655 gatcagcagcaacaa 73669 Score = 58.0 bits (29), Expect = 1e-04 Identities = 110/137 (80%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||| | |||| ||||| ||||| ||||| || ||| Sbjct: 72957 tccccttgctcttgtttgatgtgggagttatggagaaagaagtgtcgagatgagtctgag 73016 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || | || |||||||| || | || |||| |||||||| ||| | ||||||||||| Sbjct: 73017 acaatcaactggataaccgttcacacaaagctgtgtcccaaatgttacaaacctgtggaa 73076 Query: 780 aagaatggtggctgcaa 796 ||||||||||| ||||| Sbjct: 73077 aagaatggtggatgcaa 73093 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 109 taaaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||||| Sbjct: 72328 taaaggagcaccatgcacggactcttcttattcattaccagtgggatgtggaga 72381 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 537 gtcaagtggtgccccagcacaccacattgtggaaatgctatacg 580 ||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 72834 gtcaagtggtgtcctagcactccgcattgtgggaatgctatacg 72877 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1365 ctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||||||| ||||||| |||||||||||||||| Sbjct: 73790 ctctgcaagaaaatgtacgagtgcattgagaatga 73824
>emb|AJ510204.1|ATH510204 Arabidopsis thaliana ari1 gene for ARIADNE-like protein ARI1, exons 1-6 Length = 2491 Score = 125 bits (63), Expect = 7e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 |||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||| Sbjct: 1811 ttcagatcaaggcgagttctttcatattcgtatgcttttgcatattatatgtttggtgaa 1870 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||||| || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 1871 gagatgtttaaagatgagatgacccctgaggagagagagataaagaagaatttgtttgag 1930 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 1931 gatcagcagcaacaa 1945 Score = 58.0 bits (29), Expect = 1e-04 Identities = 110/137 (80%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||| | |||| ||||| ||||| ||||| || ||| Sbjct: 1233 tccccttgctcttgtttgatgtgggagttatggagaaagaagtgtcgagatgagtctgag 1292 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || | || |||||||| || | || |||| |||||||| ||| | ||||||||||| Sbjct: 1293 acaatcaactggataaccgttcacacaaagctgtgtcccaaatgttacaaacctgtggaa 1352 Query: 780 aagaatggtggctgcaa 796 ||||||||||| ||||| Sbjct: 1353 aagaatggtggatgcaa 1369 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 109 taaaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||||| ||| |||| ||||| ||||| |||| ||||||||||||| Sbjct: 604 taaaggagcaccatgcacggactcttcttattcattaccagtgggatgtggaga 657 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 537 gtcaagtggtgccccagcacaccacattgtggaaatgctatacg 580 ||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 1110 gtcaagtggtgtcctagcactccgcattgtgggaatgctatacg 1153 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1365 ctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||||||| ||||||| |||||||||||||||| Sbjct: 2066 ctctgcaagaaaatgtacgagtgcattgagaatga 2100
>gb|DQ226588.1| Boechera divaricarpa isolate SLW-2-H12 mRNA sequence Length = 480 Score = 109 bits (55), Expect = 4e-20 Identities = 115/135 (85%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgat 1169 ||||||||||| || || ||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 210 ttcagatcaagacgggtcctttcatattcatatgcttttgcatattacatgtttggtgag 269 Query: 1170 gagattttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgag 1229 ||| | ||||| |||||||||| |||||||| ||||| | ||| ||||| |||||||| Sbjct: 270 gagctgttcaaagatgagatgagccctgaggagagagagataaagaagaatttgtttgag 329 Query: 1230 gatcagcaacaacaa 1244 |||||||| |||||| Sbjct: 330 gatcagcagcaacaa 344
>ref|NM_127167.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT2G16090) mRNA, complete cds Length = 2541 Score = 105 bits (53), Expect = 6e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 1113 agatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgatgag 1172 |||||||| || |||||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 1436 agatcaagacgagttctttcatattcataccctttcgcattttacatgtttggagatgag 1495 Query: 1173 attttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgaggat 1232 | || || |||||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 1496 ctgtttaaagatgagatgagctctgaggaaagagaaataaaacaaaatctgtttgaggat 1555 Query: 1233 cagca 1237 ||||| Sbjct: 1556 cagca 1560 Score = 75.8 bits (38), Expect = 5e-10 Identities = 155/194 (79%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || |||||||||||||| || |||| ||||| || |||||| || ||| Sbjct: 983 tccccttgctcttgtgtgatgtgggaactatggagaaagaagtgctttgatgagtccgag 1042 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 ||||| ||||||||||| || | || ||||| |||||||| ||||| || ||||| || Sbjct: 1043 actgttaattggataactgttcacacaaagccgtgtcccaaatgtcacaagcctgttgaa 1102 Query: 780 aagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgt 839 ||||||||||| ||||| || || | ||| | ||| ||||| | || |||||||| ||| Sbjct: 1103 aagaatggtggatgcaatctcgtgacttgtctttgtcgacaatctttttgttggttgtgt 1162 Query: 840 ggtggtgctactgg 853 |||| |||||||| Sbjct: 1163 ggtgaagctactgg 1176 Score = 48.1 bits (24), Expect = 0.12 Identities = 45/52 (86%) Strand = Plus / Plus Query: 111 aaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||| || |||| ||||| || || ||||||||||||||||||| Sbjct: 425 aaggagcaccatgctcggactcttcttatacattaccgatgggatgtggaga 476
>gb|AY101519.1| Arabidopsis thaliana At2g16090/F7H1.11 mRNA, complete cds Length = 1782 Score = 105 bits (53), Expect = 6e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 1113 agatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgatgag 1172 |||||||| || |||||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 1210 agatcaagacgagttctttcatattcataccctttcgcattttacatgtttggagatgag 1269 Query: 1173 attttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgaggat 1232 | || || |||||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 1270 ctgtttaaagatgagatgagctctgaggaaagagaaataaaacaaaatctgtttgaggat 1329 Query: 1233 cagca 1237 ||||| Sbjct: 1330 cagca 1334 Score = 75.8 bits (38), Expect = 5e-10 Identities = 155/194 (79%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || |||||||||||||| || |||| ||||| || |||||| || ||| Sbjct: 757 tccccttgctcttgtgtgatgtgggaactatggagaaagaagtgctttgatgagtccgag 816 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 ||||| ||||||||||| || | || ||||| |||||||| ||||| || ||||| || Sbjct: 817 actgttaattggataactgttcacacaaagccgtgtcccaaatgtcacaagcctgttgaa 876 Query: 780 aagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgt 839 ||||||||||| ||||| || || | ||| | ||| ||||| | || |||||||| ||| Sbjct: 877 aagaatggtggatgcaatctcgtgacttgtctttgtcgacaatctttttgttggttgtgt 936 Query: 840 ggtggtgctactgg 853 |||| |||||||| Sbjct: 937 ggtgaagctactgg 950 Score = 48.1 bits (24), Expect = 0.12 Identities = 45/52 (86%) Strand = Plus / Plus Query: 111 aaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||| || |||| ||||| || || ||||||||||||||||||| Sbjct: 199 aaggagcaccatgctcggactcttcttatacattaccgatgggatgtggaga 250
>gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map mi398, complete sequence Length = 84544 Score = 105 bits (53), Expect = 6e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 1113 agatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgatgag 1172 |||||||| || |||||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 35832 agatcaagacgagttctttcatattcataccctttcgcattttacatgtttggagatgag 35773 Query: 1173 attttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgaggat 1232 | || || |||||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 35772 ctgtttaaagatgagatgagctctgaggaaagagaaataaaacaaaatctgtttgaggat 35713 Query: 1233 cagca 1237 ||||| Sbjct: 35712 cagca 35708 Score = 73.8 bits (37), Expect = 2e-09 Identities = 112/137 (81%) Strand = Plus / Minus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || |||||||||||||| || |||| ||||| || |||||| || ||| Sbjct: 36376 tccccttgctcttgtgtgatgtgggaactatggagaaagaagtgctttgatgagtccgag 36317 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 ||||| ||||||||||| || | || ||||| |||||||| ||||| || ||||| || Sbjct: 36316 actgttaattggataactgttcacacaaagccgtgtcccaaatgtcacaagcctgttgaa 36257 Query: 780 aagaatggtggctgcaa 796 ||||||||||| ||||| Sbjct: 36256 aagaatggtggatgcaa 36240 Score = 48.1 bits (24), Expect = 0.12 Identities = 45/52 (86%) Strand = Plus / Minus Query: 111 aaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||| || |||| ||||| || || ||||||||||||||||||| Sbjct: 37005 aaggagcaccatgctcggactcttcttatacattaccgatgggatgtggaga 36954
>gb|AY065022.1| Arabidopsis thaliana At2g16090/F7H1.11 mRNA, complete cds Length = 2552 Score = 105 bits (53), Expect = 6e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 1113 agatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgatgag 1172 |||||||| || |||||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 1436 agatcaagacgagttctttcatattcataccctttcgcattttacatgtttggagatgag 1495 Query: 1173 attttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgaggat 1232 | || || |||||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 1496 ctgtttaaagatgagatgagctctgaggaaagagaaataaaacaaaatctgtttgaggat 1555 Query: 1233 cagca 1237 ||||| Sbjct: 1556 cagca 1560 Score = 75.8 bits (38), Expect = 5e-10 Identities = 155/194 (79%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || |||||||||||||| || |||| ||||| || |||||| || ||| Sbjct: 983 tccccttgctcttgtgtgatgtgggaactatggagaaagaagtgctttgatgagtccgag 1042 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 ||||| ||||||||||| || | || ||||| |||||||| ||||| || ||||| || Sbjct: 1043 actgttaattggataactgttcacacaaagccgtgtcccaaatgtcacaagcctgttgaa 1102 Query: 780 aagaatggtggctgcaacctggttgcatgtatatgtggacaagcattctgttggttatgt 839 ||||||||||| ||||| || || | ||| | ||| ||||| | || |||||||| ||| Sbjct: 1103 aagaatggtggatgcaatctcgtgacttgtctttgtcgacaatctttttgttggttgtgt 1162 Query: 840 ggtggtgctactgg 853 |||| |||||||| Sbjct: 1163 ggtgaagctactgg 1176 Score = 48.1 bits (24), Expect = 0.12 Identities = 45/52 (86%) Strand = Plus / Plus Query: 111 aaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||| || |||| ||||| || || ||||||||||||||||||| Sbjct: 425 aaggagcaccatgctcggactcttcttatacattaccgatgggatgtggaga 476
>emb|BX819396.1|CNS0AA1P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2337 Score = 105 bits (53), Expect = 6e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 1113 agatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgatgag 1172 |||||||| || |||||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 1425 agatcaagacgagttctttcatattcataccctttcgcattttacatgtttggagatgag 1484 Query: 1173 attttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgaggat 1232 | || || |||||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 1485 ctgtttaaagatgagatgagctctgaggaaagagaaataaaacaaaatctgtttgaggat 1544 Query: 1233 cagca 1237 ||||| Sbjct: 1545 cagca 1549 Score = 48.1 bits (24), Expect = 0.12 Identities = 45/52 (86%) Strand = Plus / Plus Query: 111 aaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||| || |||| ||||| || || ||||||||||||||||||| Sbjct: 411 aaggagcaccatgctcggactcttcttatacattaccgatgggatgtggaga 462
>emb|AJ510205.1|ATH510205 Arabidopsis thaliana ari2 gene for ARIADNE-like protein ARI2, exons 1-7 Length = 2456 Score = 105 bits (53), Expect = 6e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 1113 agatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttggtgatgag 1172 |||||||| || |||||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 1727 agatcaagacgagttctttcatattcataccctttcgcattttacatgtttggagatgag 1786 Query: 1173 attttcaaggatgagatgactcctgaggaaagagaactcaagcagaatctgtttgaggat 1232 | || || |||||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 1787 ctgtttaaagatgagatgagctctgaggaaagagaaataaaacaaaatctgtttgaggat 1846 Query: 1233 cagca 1237 ||||| Sbjct: 1847 cagca 1851 Score = 73.8 bits (37), Expect = 2e-09 Identities = 112/137 (81%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || |||||||||||||| || |||| ||||| || |||||| || ||| Sbjct: 1183 tccccttgctcttgtgtgatgtgggaactatggagaaagaagtgctttgatgagtccgag 1242 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 ||||| ||||||||||| || | || ||||| |||||||| ||||| || ||||| || Sbjct: 1243 actgttaattggataactgttcacacaaagccgtgtcccaaatgtcacaagcctgttgaa 1302 Query: 780 aagaatggtggctgcaa 796 ||||||||||| ||||| Sbjct: 1303 aagaatggtggatgcaa 1319 Score = 48.1 bits (24), Expect = 0.12 Identities = 45/52 (86%) Strand = Plus / Plus Query: 111 aaggagcaccacgcaaggacgcttctaattcactaccgatgggatgtggaga 162 ||||||||||| || |||| ||||| || || ||||||||||||||||||| Sbjct: 554 aaggagcaccatgctcggactcttcttatacattaccgatgggatgtggaga 605
>gb|AC189325.1| Brassica rapa subsp. pekinensis clone KBrB036M17, complete sequence Length = 151101 Score = 81.8 bits (41), Expect = 9e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 660 tccccttgttcctgtgtgatgtgggagctttggatcaagaaatgtcgtgatgaatcagag 719 |||||||| || ||| ||||||||||||| |||| ||||| ||| | ||||| || ||| Sbjct: 149932 tccccttgctcttgtttgatgtgggagctgtggagaaagaagtgtagggatgagtcggag 149991 Query: 720 actgtgaattggataacagtaaatactaagccctgtcccaagtgtcataaacctgtggag 779 || || || |||||||| || |||| |||| |||||||||||| | || ||||||||| Sbjct: 149992 acggttaactggataactgttcataccaagctgtgtcccaagtgttacaagcctgtggag 150051 Query: 780 aagaatggtggctgcaa 796 ||||||||||| ||||| Sbjct: 150052 aagaatggtgggtgcaa 150068
>ref|NM_113687.3| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT3G27710) mRNA, complete cds Length = 1860 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 1544 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 1591
>ref|NM_113688.1| Arabidopsis thaliana unknown protein (AT3G27720) mRNA, complete cds Length = 1482 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 1326 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 1373 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttgg 1165 ||||||||||| | ||||||| |||||||||||||| | |||||||||||||| Sbjct: 1084 ttcagatcaagaagaattctttcgtattcttatcctttcgtgttctacatgtttgg 1139 Score = 46.1 bits (23), Expect = 0.48 Identities = 95/119 (79%) Strand = Plus / Plus Query: 1126 ttctttcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatg 1185 ||||||| |||||||||||||| | |||||||||||||| | ||| | ||||| |||| Sbjct: 1100 ttctttcgtattcttatcctttcgtgttctacatgtttggcaaagagttgttcaaagatg 1159 Query: 1186 agatgactcctgaggaaagagaactcaagcagaatctgtttgaggatcagcaacaacaa 1244 | |||| ||| || ||| | | ||| ||||||||||||| |||||||| |||||| Sbjct: 1160 atatgagcgatgaagagagaaatataaagaagaatctgtttgaagatcagcagcaacaa 1218
>gb|AY096743.1| Arabidopsis thaliana unknown protein (At3g27710) mRNA, complete cds Length = 1645 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 1446 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 1493
>gb|AY072185.1| Arabidopsis thaliana unknown protein (At3g27710) mRNA, complete cds Length = 1885 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 1544 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 1591
>dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGF10 Length = 84702 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 45610 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 45657 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 48326 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 48373 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttgg 1165 ||||||||||| | ||||||| |||||||||||||| | |||||||||||||| Sbjct: 48084 ttcagatcaagaagaattctttcgtattcttatcctttcgtgttctacatgtttgg 48139 Score = 46.1 bits (23), Expect = 0.48 Identities = 95/119 (79%) Strand = Plus / Plus Query: 1126 ttctttcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatg 1185 ||||||| |||||||||||||| | |||||||||||||| | ||| | ||||| |||| Sbjct: 48100 ttctttcgtattcttatcctttcgtgttctacatgtttggcaaagagttgttcaaagatg 48159 Query: 1186 agatgactcctgaggaaagagaactcaagcagaatctgtttgaggatcagcaacaacaa 1244 | |||| ||| || ||| | | ||| ||||||||||||| |||||||| |||||| Sbjct: 48160 atatgagcgatgaagagagaaatataaagaagaatctgtttgaagatcagcagcaacaa 48218
>emb|AJ510207.1|ATH510207 Arabidopsis thaliana partial ari4 pseudogene, exon 1 Length = 1746 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 1590 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 1637 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1110 ttcagatcaaggcgtgttctttcatattcttatccttttgcattctacatgtttgg 1165 ||||||||||| | ||||||| |||||||||||||| | |||||||||||||| Sbjct: 1348 ttcagatcaagaagaattctttcgtattcttatcctttcgtgttctacatgtttgg 1403 Score = 46.1 bits (23), Expect = 0.48 Identities = 95/119 (79%) Strand = Plus / Plus Query: 1126 ttctttcatattcttatccttttgcattctacatgtttggtgatgagattttcaaggatg 1185 ||||||| |||||||||||||| | |||||||||||||| | ||| | ||||| |||| Sbjct: 1364 ttctttcgtattcttatcctttcgtgttctacatgtttggcaaagagttgttcaaagatg 1423 Query: 1186 agatgactcctgaggaaagagaactcaagcagaatctgtttgaggatcagcaacaacaa 1244 | |||| ||| || ||| | | ||| ||||||||||||| |||||||| |||||| Sbjct: 1424 atatgagcgatgaagagagaaatataaagaagaatctgtttgaagatcagcagcaacaa 1482
>emb|AJ510206.1|ATH510206 Arabidopsis thaliana ari3 gene for ARIADNE-like protein ARI3, exon 1 Length = 1614 Score = 56.0 bits (28), Expect = 5e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1352 tgtggtagataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 |||||| |||| ||||||||| |||||||| |||||||||||||||| Sbjct: 1446 tgtggttgataacctctgcaaggaaatgtatgagtgcattgagaatga 1493
>gb|CP000477.1| Methanosaeta thermophila PT, complete genome Length = 1879471 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ggaggatctcaggaaggtgatgga 97 |||||||||||||||||||||||| Sbjct: 652029 ggaggatctcaggaaggtgatgga 652006 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 gagggaggatctcaggaaggtg 92 |||||||||||||||||||||| Sbjct: 917297 gagggaggatctcaggaaggtg 917276
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 tcctcctcctccgtgatcacca 48 |||||||||||||||||||||| Sbjct: 23506456 tcctcctcctccgtgatcacca 23506435 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1367 ctgcaagcaaatgtatcagtg 1387 ||||||||||||||||||||| Sbjct: 22432972 ctgcaagcaaatgtatcagtg 22432992
>ref|XM_954136.1| Neurospora crassa OR74A hypothetical protein (NCU06882.1) partial mRNA Length = 1854 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 777 gagaagaatggtggctgcaacc 798 |||||||||||||||||||||| Sbjct: 1171 gagaagaatggtggctgcaacc 1192
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 tcctcctcctccgtgatcacca 48 |||||||||||||||||||||| Sbjct: 62359 tcctcctcctccgtgatcacca 62338
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1367 ctgcaagcaaatgtatcagtg 1387 ||||||||||||||||||||| Sbjct: 111907 ctgcaagcaaatgtatcagtg 111927
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 atattcgagctgctcgatcagaagg 189 ||||||||||||||||| ||||||| Sbjct: 2977973 atattcgagctgctcgagcagaagg 2977997
>gb|AC189529.1| Brassica rapa subsp. pekinensis clone KBrB092P05, complete sequence Length = 145402 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1359 gataggctctgcaagcaaatgtatcagtgcattgagaatga 1399 ||||| ||||||||| | ||||| |||||||||||||||| Sbjct: 231 gatagcctctgcaagaagatgtacgagtgcattgagaatga 271
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 774 gtggagaagaatggtggctgc 794 ||||||||||||||||||||| Sbjct: 8397671 gtggagaagaatggtggctgc 8397691
>gb|AY608692.1| Avian leukosis virus envelope protein (env) gene, complete cds Length = 1887 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1726 gaagctccagtatctgacggaacat 1750 ||||||||||||||||| ||||||| Sbjct: 1599 gaagctccagtatctgaaggaacat 1623
>gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0032D15, complete sequence Length = 161968 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1282 agaaggattttcaaaatttta 1302 ||||||||||||||||||||| Sbjct: 138247 agaaggattttcaaaatttta 138267
>gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, complete sequence Length = 196806 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1794 aaaggaatttgtgttctcttttgtt 1818 |||||||||||| |||||||||||| Sbjct: 17342 aaaggaatttgtcttctcttttgtt 17318
>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02, complete sequence Length = 109969 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1282 agaaggattttcaaaatttta 1302 ||||||||||||||||||||| Sbjct: 9874 agaaggattttcaaaatttta 9894
>gb|AC008225.4| Drosophila melanogaster clone BACR03E11, complete sequence Length = 174123 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 atattcgagctgctcgatcagaagg 189 ||||||||||||||||| ||||||| Sbjct: 60652 atattcgagctgctcgagcagaagg 60628
>ref|XM_545467.2| PREDICTED: Canis familiaris similar to Tripartite motif protein 10 (RING finger protein 9) (B30-RING finger protein) (LOC488345), mRNA Length = 1782 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gactgcggccacaactactgc 341 ||||||||||||||||||||| Sbjct: 424 gactgcggccacaactactgc 444
>ref|NM_141444.1| Drosophila melanogaster lethal (3) s2214 CG10061-RA (l(3)s2214), mRNA Length = 2760 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 atattcgagctgctcgatcagaagg 189 ||||||||||||||||| ||||||| Sbjct: 898 atattcgagctgctcgagcagaagg 922
>gb|AC158465.3| Medicago truncatula chromosome 7 BAC clone mth2-61f23, complete sequence Length = 43762 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1314 gttatggatacaatgaagcat 1334 ||||||||||||||||||||| Sbjct: 460 gttatggatacaatgaagcat 440
>gb|AC148965.3| Medicago truncatula chromosome 7 BAC clone mth2-10f21, complete sequence Length = 97477 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1314 gttatggatacaatgaagcat 1334 ||||||||||||||||||||| Sbjct: 84594 gttatggatacaatgaagcat 84574
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1282 agaaggattttcaaaatttta 1302 ||||||||||||||||||||| Sbjct: 9027877 agaaggattttcaaaatttta 9027897
>gb|AC073145.8| Homo sapiens chromosome 7 clone RP11-769P3, complete sequence Length = 135518 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1794 aaaggaatttgtgttctcttt 1814 ||||||||||||||||||||| Sbjct: 80760 aaaggaatttgtgttctcttt 80740
>gb|AC009682.7| Homo sapiens chromosome 8, clone RP11-72O13, complete sequence Length = 155428 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1777 tgtttcttcagctacataaaggaatttgt 1805 |||||||||||||||| || ||||||||| Sbjct: 22082 tgtttcttcagctacaaaatggaatttgt 22054
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1367 ctgcaagcaaatgtatcagtg 1387 ||||||||||||||||||||| Sbjct: 36727 ctgcaagcaaatgtatcagtg 36747
>gb|AC139019.3| Homo sapiens chromosome 8, clone CTD-3091F23, complete sequence Length = 134096 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1777 tgtttcttcagctacataaaggaatttgt 1805 |||||||||||||||| || ||||||||| Sbjct: 120855 tgtttcttcagctacaaaatggaatttgt 120827
>gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR01C11, complete sequence Length = 176991 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 atattcgagctgctcgatcagaagg 189 ||||||||||||||||| ||||||| Sbjct: 14578 atattcgagctgctcgagcagaagg 14602
>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence Length = 178519 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 agaatatttcattgtgaaaataaat 380 |||||||||||||||| |||||||| Sbjct: 141926 agaatatttcattgtgtaaataaat 141902
>dbj|AP004243.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-312N17, complete sequences Length = 167368 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tttcattgtgaaaataaatga 382 ||||||||||||||||||||| Sbjct: 93792 tttcattgtgaaaataaatga 93772
>gb|AC006427.13|AC006427 Homo sapiens chromosome 4 clone C0201M04, complete sequence Length = 178524 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1160 gtttggtgatgagattttcaa 1180 ||||||||||||||||||||| Sbjct: 110631 gtttggtgatgagattttcaa 110611
>dbj|AP005664.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1588E7, complete sequence Length = 156544 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1777 tgtttcttcagctacataaaggaatttgt 1805 |||||||||||||||| || ||||||||| Sbjct: 38604 tgtttcttcagctacaaaatggaatttgt 38632
>gb|AC136376.3| Mus musculus BAC clone RP23-243M12 from 14, complete sequence Length = 197646 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1794 aaaggaatttgtgttctcttttgtt 1818 |||||||||||| |||||||||||| Sbjct: 167505 aaaggaatttgtcttctcttttgtt 167481
>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete sequence Length = 251814 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 411 gctccaaagtgcaatgccatctgtg 435 ||||||||| ||||||||||||||| Sbjct: 16180 gctccaaagagcaatgccatctgtg 16156 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 368,183,219 Number of extensions: 20261674 Number of successful extensions: 434201 Number of sequences better than 10.0: 55 Number of HSP's gapped: 434194 Number of HSP's successfully gapped: 114 Length of query: 1978 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1955 Effective length of database: 18,503,978,556 Effective search space: 36175278076980 Effective search space used: 36175278076980 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
