ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45g14 |
|---|---|
| Clone Library Name | barley_pub |
>Q71S22:INVSA_XENLA Inversin-A - Xenopus laevis (African clawed frog)| Length = 1007 Score = 41.2 bits (95), Expect = 0.008 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 14/144 (9%) Frame = -2 Query: 536 KDLQQVAAARESHVQSSSRRAELDTSASTRLQSTPRGTTGEMVFGRID---SQTRPARIS 366 +DL Q + R+SH + S+ RLQ++ R T G ++ G ++ +T+ R + Sbjct: 754 EDLVQKESRRKSHREERKGSHRQRASSHHRLQASERETAGSVIHGEVEFKKKETKKGRRT 813 Query: 365 VTESAKVSMSALDCELEASE----TAAMPETARLRSTARSDAPPTRMGRARTSVS----- 213 ++K+ S L SE + + ++ S P+R+ R R +S Sbjct: 814 AAGTSKIRASGEAGRLSQSEKEFSSTGIQGRVDCITSPESCETPSRVCRERKMISAKSGQ 873 Query: 212 --LLRTQSPTHSCRCRIALLHTLS 147 L TQSP +C+ AL +L+ Sbjct: 874 RPLTETQSPEKACQGSSALKPSLT 897
>Q9QWH1:PHC2_MOUSE Polyhomeotic-like protein 2 - Mus musculus (Mouse)| Length = 850 Score = 37.4 bits (85), Expect = 0.11 Identities = 35/125 (28%), Positives = 54/125 (43%) Frame = -2 Query: 566 SLQLPPYTTTKDLQQVAAARESHVQSSSRRAELDTSASTRLQSTPRGTTGEMVFGRIDSQ 387 +L P T + LQQ+ AA++ H+ + + +S +LQS +V R Q Sbjct: 66 ALHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVANR---Q 122 Query: 386 TRPARISVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLL 207 SV+ A S+L+ AA P A+L + A+S G A+ +V L Sbjct: 123 GSTPGSSVSSQAPAQSSSLN-------LAASPAAAQLINRAQSVNSAAASGLAQQAVLLG 175 Query: 206 RTQSP 192 T SP Sbjct: 176 NTSSP 180
>Q8IXK0:PHC2_HUMAN Polyhomeotic-like protein 2 - Homo sapiens (Human)| Length = 858 Score = 36.6 bits (83), Expect = 0.19 Identities = 34/125 (27%), Positives = 53/125 (42%) Frame = -2 Query: 566 SLQLPPYTTTKDLQQVAAARESHVQSSSRRAELDTSASTRLQSTPRGTTGEMVFGRIDSQ 387 +L P T + LQQ+ AA++ H+ + + +S +LQS +V R S Sbjct: 63 ALHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVSNRQGS- 121 Query: 386 TRPARISVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLL 207 T + VS A + + AA P A+L + A+S G A+ +V L Sbjct: 122 --------TSGSNVSAQA-PAQSSSINLAASPAAAQLLNRAQSVNSAAASGIAQQAVLLG 172 Query: 206 RTQSP 192 T SP Sbjct: 173 NTSSP 177
>Q8IRR1:VNNL2_DROME Vanin-like protein 2 precursor - Drosophila melanogaster (Fruit fly)| Length = 517 Score = 35.0 bits (79), Expect = 0.54 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +2 Query: 917 CHFSLNWSSIFT*SYNSSRYMYRVWY---WQNFDLFDGGMAKFDRNYGIICSTANN 1075 CHF L W S+ S N+S Y YRV W+N D + RN G+ + N+ Sbjct: 352 CHFDLAWRSLGKPSRNTSHYSYRVGIYEGWRNEKRLD---VNYIRNCGVFTCSGNS 404
>Q8NDX5:PHC3_HUMAN Polyhomeotic-like protein 3 - Homo sapiens (Human)| Length = 983 Score = 34.3 bits (77), Expect = 0.93 Identities = 36/126 (28%), Positives = 55/126 (43%) Frame = -2 Query: 566 SLQLPPYTTTKDLQQVAAARESHVQSSSRRAELDTSASTRLQSTPRGTTGEMVFGRIDSQ 387 +L PP + + LQQ+ AA++ H+ + + +S++LQS + GR Sbjct: 53 ALHRPPSSAAQYLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSL-AAVQASLSSGR--PS 109 Query: 386 TRPARISVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLL 207 T P SVT+ + SMS L S T A + +RS A + G LL Sbjct: 110 TSPTG-SVTQQS--SMSQTSINLSTSPTPA-------QLISRSQASSSTSGSITQQTMLL 159 Query: 206 RTQSPT 189 + SPT Sbjct: 160 GSTSPT 165
>Q8CHP6:PHC3_MOUSE Polyhomeotic-like protein 3 - Mus musculus (Mouse)| Length = 981 Score = 33.9 bits (76), Expect = 1.2 Identities = 33/126 (26%), Positives = 58/126 (46%) Frame = -2 Query: 566 SLQLPPYTTTKDLQQVAAARESHVQSSSRRAELDTSASTRLQSTPRGTTGEMVFGRIDSQ 387 +L PP + + LQQ+ AA++ H+ + + +S++LQS + GR Sbjct: 52 ALHRPPSSAAQYLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSL-AAVQASLSSGR--PS 108 Query: 386 TRPARISVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLL 207 T P SVT+ + +S +++ +A P A+L + RS + +G LL Sbjct: 109 TSPTG-SVTQQSSMSQTSI--------LSASPAPAQLMN--RSQTSSSTIGSITQQTMLL 157 Query: 206 RTQSPT 189 + SPT Sbjct: 158 GSTSPT 163
>P38096:LAMB_EMENI Lactam utilization protein lamB - Emericella nidulans (Aspergillus| nidulans) Length = 262 Score = 33.9 bits (76), Expect = 1.2 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Frame = -2 Query: 332 LDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLLRTQSPTH---SCRCRIAL 162 L+ EL + ++ T L TAR RM R+ + SL + S SCRCR+ + Sbjct: 160 LNFELSSMVMSSTTLTECLSLTARRSHGTLRMWRSMSGNSLRISLSRALMELSCRCRLKI 219 Query: 161 LHTLSPRPXXXXXXGKTVLEGSRQRRRW 78 + P VL+ SRQRR+W Sbjct: 220 MMC----PFVVIPIRLAVLKSSRQRRKW 243
>Q22122:U418_CAEEL UPF0418 protein T03G11.3 - Caenorhabditis elegans| Length = 349 Score = 33.5 bits (75), Expect = 1.6 Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Frame = -2 Query: 566 SLQLPPYTTTKDLQQVAAARESHVQSSSRRAELDTSAS-TRLQSTPRGTTGEMVFGRIDS 390 S + P T +D + A R+ +SRR LDT S T Q++ R T+ + + Sbjct: 214 SAERKPTTRGRDGSLLRARRDDSNDITSRRKSLDTRTSLTTGQASNRHTS-------LSA 266 Query: 389 QTRPARISVTESAKVSMSA-LDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVS 213 RP +T S+K S SA D L+ S T RL++ A + +R G +S + Sbjct: 267 GMRPTLPPMTPSSKRSSSAKRDAPLQQSSTPQQ----RLKTPASTTTTASRSGSRTSSRA 322 Query: 212 LLRTQS 195 R S Sbjct: 323 CPRDDS 328
>Q6ZRI6:CO039_HUMAN Uncharacterized protein C15orf39 - Homo sapiens (Human)| Length = 1047 Score = 32.7 bits (73), Expect = 2.7 Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 3/134 (2%) Frame = -2 Query: 641 PCMNFCASTLT---ALPSSGEAAAIPI*SLQLPPYTTTKDLQQVAAARESHVQSSSRRAE 471 PC C S A P S + L PY D+ A E+ + S AE Sbjct: 478 PCARECQSLPQKEDARPPSSPPMPVIDNVFSLAPYRDYLDVP----APEATTEPDSATAE 533 Query: 470 LDTSASTRLQSTPRGTTGEMVFGRIDSQTRPARISVTESAKVSMSALDCELEASETAAMP 291 D++ +T + +G G + S ++P R S+ E + +S EAS A Sbjct: 534 PDSAPATS-EGQDKGCRGTLPAQEGPSGSKPLRGSLKEEVALDLSVRKPTAEASPVKASR 592 Query: 290 ETARLRSTARSDAP 249 + TA D P Sbjct: 593 SVEHAKPTAAMDVP 606
>Q61194:P3C2A_MOUSE Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing| alpha polypeptide - Mus musculus (Mouse) Length = 1686 Score = 32.0 bits (71), Expect = 4.6 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Frame = -2 Query: 509 RESHVQSSSRRAELDTSASTRLQSTPRGTTGEMVFGRIDSQTRPARISVTE--SAKVSMS 336 ++ + S R EL +S R Q + MVF +DSQ R I V + A++ Sbjct: 44 KDRQMTDSPRGFELSSSTRQRTQGFNKQDYDLMVFPELDSQKRAVDIDVEKLTQAELEKI 103 Query: 335 ALDCELEASETAAMPET 285 LD E + A+P T Sbjct: 104 LLDDNFETRKPPALPVT 120
>Q12140:BSC1_YEAST Bypass of stop codon protein 1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 328 Score = 32.0 bits (71), Expect = 4.6 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 1/122 (0%) Frame = -2 Query: 545 TTTKDLQQVAAARESHVQSSSRRAELDTSASTRLQS-TPRGTTGEMVFGRIDSQTRPARI 369 TTT ++ S SSS + TS+ST S T TT + + Sbjct: 180 TTTSSTTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSS 239 Query: 368 SVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLLRTQSPT 189 S T S+ + + +++S T ++ T + S S R T V+ L + Sbjct: 240 STTSSSTKTSTTTSSTVKSSSTTSIDFTTSVDSHTSSSVADIYRSRTSTDVTTLAASTSP 299 Query: 188 HS 183 S Sbjct: 300 FS 301
>Q8TFG9:YL61_SCHPO Uncharacterized serine/threonine-rich protein PB15E9.01c precursor| - Schizosaccharomyces pombe (Fission yeast) Length = 943 Score = 31.6 bits (70), Expect = 6.0 Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 1/147 (0%) Frame = -2 Query: 620 STLTALPSSGEAAAIPI*SLQLPPYTTTKDLQQVAAARESHVQSSSRRAELDTSASTRLQ 441 ST +A P+S + S L +TT ++ S + SSS + S+ST Sbjct: 98 STTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSS 157 Query: 440 STPRGTTGEMVFGRIDSQTRPARISVT-ESAKVSMSALDCELEASETAAMPETARLRSTA 264 S +T S + +S T S + S+L S T+A ++ L STA Sbjct: 158 SLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTA 217 Query: 263 RSDAPPTRMGRARTSVSLLRTQSPTHS 183 S++ T A +S++ + + T S Sbjct: 218 ASNS-ATSSSLASSSLNSTTSATATSS 243
>Q5U405:TMPSD_MOUSE Transmembrane protease, serine 13 - Mus musculus (Mouse)| Length = 543 Score = 31.6 bits (70), Expect = 6.0 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Frame = -2 Query: 317 EASETAAMPETARLRSTARSDAPPTRM--GRARTSVSLLRTQSPTHSCRCRIALLHTLSP 144 +AS A P A + + APP+R GR+ ++ S T SPT R + + Sbjct: 49 QASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPI 108 Query: 143 R--PXXXXXXGKTVLEG---SRQRRRWAEAGRGVDGIGAMVRLLSRVISMWL 3 R P + E S + W E R + IG ++ L+S VIS+ L Sbjct: 109 RASPARSAPATRATRESPGLSFPKFSWQETQRQLPLIGCVILLISLVISLIL 160
>Q8NET4:RGAG1_HUMAN Retrotransposon gag domain-containing protein 1 - Homo sapiens| (Human) Length = 1388 Score = 31.6 bits (70), Expect = 6.0 Identities = 42/165 (25%), Positives = 59/165 (35%), Gaps = 16/165 (9%) Frame = -2 Query: 641 PCMNFCASTLTALPSSG-------EAAAIPI*SLQLPPYTTTKDLQQVAAARESHVQSSS 483 P ++L +PSSG A A + S QL T K + V Sbjct: 432 PASGAMTTSLMTVPSSGVMSTEQMSATASRVMSAQL---TMAKTSGAMPTGSMKAVAKQY 488 Query: 482 RRAELDTSASTRLQSTPRGTTGEMVFGRIDSQTRPARISVTES---------AKVSMSAL 330 +RA ST L+ P T+G M T+P + +E+ A SMS L Sbjct: 489 KRATASGKMSTPLRRAP--TSGAM-------STQPVTATASETMSMPQLTVPASGSMSML 539 Query: 329 DCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLLRTQS 195 SE +MP+ + S S A M S L+ Q+ Sbjct: 540 QMRAPVSEAMSMPQMRTMASGLTSAAQMKAMTSGAMSTPLMTAQT 584
>P13496:DCTN1_DROME Dynactin subunit 1 - Drosophila melanogaster (Fruit fly)| Length = 1265 Score = 31.6 bits (70), Expect = 6.0 Identities = 32/111 (28%), Positives = 47/111 (42%) Frame = -2 Query: 383 RPARISVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRARTSVSLLR 204 RP ++ + E+A S +++ A+ TAA P ARL S+ T + +R S+ R Sbjct: 69 RPTQLRLLEAAPGSRRSIEDVSGATPTAAQPTKARLSSSR------TSLSSSRQSLLGSR 122 Query: 203 TQSPTHSCRCRIALLHTLSPRPXXXXXXGKTVLEGSRQRRRWAEAGRGVDG 51 TQ T S R A ++ PR K S A A G +G Sbjct: 123 TQLTT-SLSERTASSSSIGPRKSLAPQNSKDKESPSTSLAEGAPAASGGNG 172
>O42115:ARX_DANRE Aristaless-related homeobox protein - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 453 Score = 31.2 bits (69), Expect = 7.9 Identities = 21/77 (27%), Positives = 36/77 (46%) Frame = -2 Query: 407 FGRIDSQTRPARISVTESAKVSMSALDCELEASETAAMPETARLRSTARSDAPPTRMGRA 228 FGR+ S P + T +A + +A E +AA+PE S+ +D R Sbjct: 367 FGRLFSSMGPLTSASTAAALLRQTAPPVESPVQPSAALPEPPSSSSSTAAD-------RR 419 Query: 227 RTSVSLLRTQSPTHSCR 177 +S++ LR ++ HS + Sbjct: 420 ASSIAALRLKAKEHSAQ 436 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 172,634,512 Number of extensions: 3597765 Number of successful extensions: 10387 Number of sequences better than 10.0: 16 Number of HSP's gapped: 10376 Number of HSP's successfully gapped: 16 Length of query: 366 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 251 Effective length of database: 69,142,514 Effective search space: 17354771014 Effective search space used: 17354771014 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
