ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf41k23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121256:Os01g0254200 82 2e-16
2AK066346:Os07g0476500 45 2e-05
3AK111715:Os08g0408200 27 5.2
4AK071099:Os01g0710800 27 6.9
5AK100395:Os03g0110400 27 8.9

>AK121256:Os01g0254200 |
          Length = 62
 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
 Frame = +2

Query: 134 MAKIKPRALLAQSKQKKSPTKIG-PTMIAYIVLGVLAVSSL-YAYKYWMSKAPAGAESVA 307
           MAK+KP+ALLAQSKQKKSPT+IG  T+I YIVLG L VSS+ YA KYW ++ PA AE + 
Sbjct: 1   MAKVKPKALLAQSKQKKSPTQIGATTIITYIVLGALVVSSVYYALKYWQNRGPAAAEGIV 60

Query: 308 GN 313
           GN
Sbjct: 61  GN 62



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>AK066346:Os07g0476500 |
          Length = 235

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
 Frame = +2

Query: 134 MAKIKPRALLAQSKQKKSPTKIG-PTMIAYIVLGVLAVSSLYA-YKYW 271
           MA+IKP+ LL QSK KK+PT+I   T++ + ++ +L   SLYA Y++W
Sbjct: 1   MARIKPKQLLIQSKTKKAPTRISYSTIVTWNLIVILVALSLYATYRHW 48



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>AK111715:Os08g0408200 |
          Length = 444

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 409 LRSIYWSTTTEISQEDDTYNNKNQSFHSWSGLVPSNT 299
           LR++ W+TT     + D Y   NQS   WS L  ++T
Sbjct: 133 LRNLVWATT-----KHDVYTVHNQSVTHWSSLDQTST 164



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>AK071099:Os01g0710800 |
          Length = 93

 Score = 26.9 bits (58), Expect = 6.9
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 112 AAHREVSHGEDQAESTVGTEQAEEEPY*NWPNDDCLHRPRCSSGVLTLRIQVL 270
           AA R   HG   A+ ++        P  + PN  CL   RC SG   L + +L
Sbjct: 22  AAKRAQPHGGHLADDSIRASGDLSSPIGSAPNGRCLLFHRCFSGTSNLCMLLL 74



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>AK100395:Os03g0110400 |
          Length = 638

 Score = 26.6 bits (57), Expect = 8.9
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = -3

Query: 421 KKVCLRSI--YWSTTTEISQE----DDTYNNKNQSFHSWSGL 314
           +++C+ S+  YW    E        +D Y++KN   + W GL
Sbjct: 463 ERICMPSVTEYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGL 504


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 10,921,922
Number of extensions: 206293
Number of successful extensions: 635
Number of sequences better than 10.0: 5
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 5
Length of query: 162
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 69
Effective length of database: 11,676,042
Effective search space: 805646898
Effective search space used: 805646898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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