ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf41k23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q94A16:CP21C_ARATH Peptidyl-prolyl cis-trans isomerase CYP21-3, ... 44 4e-04
2P51864:TDGF2_HUMAN Teratocarcinoma-derived growth factor 2 - Hom... 31 2.5
3Q7VVZ9:ATKA_BORPE Potassium-transporting ATPase A chain - Bordet... 30 4.2
4Q7W536:ATKA_BORPA Potassium-transporting ATPase A chain - Bordet... 30 4.2
5Q7WCL8:ATKA_BORBR Potassium-transporting ATPase A chain - Bordet... 30 4.2
6Q8SW83:Y304_ENCCU UPF0328 protein ECU03_0040 - Encephalitozoon c... 29 7.1
7P15687:VN53_ROTS1 Non-structural RNA-binding protein 53 - Simian... 29 9.4

>Q94A16:CP21C_ARATH Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial|
           precursor - Arabidopsis thaliana (Mouse-ear cress)
          Length = 230
 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
 Frame = +2

Query: 134 MAKIKPRALLAQSKQKKSPTKIGPTMIAYIVLGVLAVSSLY--AYKYWMSKA 283
           MAKIKP+ALL QSK+KK P++I  T I    L VL +  +   AY+ W  ++
Sbjct: 1   MAKIKPQALLQQSKKKKGPSRISITNIVIYTLAVLLLVFVLFSAYRRWTHRS 52



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>P51864:TDGF2_HUMAN Teratocarcinoma-derived growth factor 2 - Homo sapiens (Human)|
          Length = 188

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 199 WPNDDCLHRPRCSSGVLTLRIQVLDEQGTSWSRECCWELSPTNCGTIDFCCC 354
           WP ++   RPR S  VL + IQ         +R CC  L+   C    FC C
Sbjct: 52  WPQEEPAIRPRSSQRVLPMGIQ----HSKELNRTCC--LNGGTCMLESFCAC 97



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>Q7VVZ9:ATKA_BORPE Potassium-transporting ATPase A chain - Bordetella pertussis|
          Length = 594

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 209 MIAYIVLGVLAVSSLYAYKYWMSKAPAGAESVA 307
           M+ + VLGVLAV +L   + W+   PAG   VA
Sbjct: 70  MLVFNVLGVLAVYALQRLQGWLPLNPAGLPGVA 102



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>Q7W536:ATKA_BORPA Potassium-transporting ATPase A chain - Bordetella parapertussis|
          Length = 594

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 209 MIAYIVLGVLAVSSLYAYKYWMSKAPAGAESVA 307
           M+ + VLGVLAV +L   + W+   PAG   VA
Sbjct: 70  MLVFNVLGVLAVYALQRLQGWLPLNPAGLPGVA 102



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>Q7WCL8:ATKA_BORBR Potassium-transporting ATPase A chain - Bordetella bronchiseptica|
           (Alcaligenes bronchisepticus)
          Length = 594

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 209 MIAYIVLGVLAVSSLYAYKYWMSKAPAGAESVA 307
           M+ + VLGVLAV +L   + W+   PAG   VA
Sbjct: 70  MLVFNVLGVLAVYALQRLQGWLPLNPAGLPGVA 102



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>Q8SW83:Y304_ENCCU UPF0328 protein ECU03_0040 - Encephalitozoon cuniculi|
          Length = 268

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 170 SKQKKSPTKIGPTMIAYIVLGVLAVSSLYAYKYWMS 277
           S +K+SP    P  IA  VL ++  + +YA+  W+S
Sbjct: 209 SPEKQSPPPTAPWRIAVFVLILIFAALIYAFMMWVS 244



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>P15687:VN53_ROTS1 Non-structural RNA-binding protein 53 - Simian 11 rotavirus A|
           (strain SA11-Both) (SiRV-A/SA11)
          Length = 495

 Score = 28.9 bits (63), Expect = 9.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 217 LHRPRCSSGVLTLRIQVLDEQGTSWSRECCWELSPTNCGTIDFCCCMYHL 366
           L+R  C+ G  ++ + V DE+   W  ECC     T+C    + C + H+
Sbjct: 17  LNRRLCNIGANSICMPVPDEKIKGWCLECCQIADLTHC----YGCSLPHV 62


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 65,985,964
Number of extensions: 1204495
Number of successful extensions: 3498
Number of sequences better than 10.0: 7
Number of HSP's gapped: 3498
Number of HSP's successfully gapped: 7
Length of query: 162
Length of database: 100,686,439
Length adjustment: 104
Effective length of query: 58
Effective length of database: 72,159,759
Effective search space: 4185266022
Effective search space used: 4185266022
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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