ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf41f04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009502.1| Triticum aestivum clone wr1.pk0083.h5:fis, full insert mRNA sequence Length = 1061 Score = 1031 bits (520), Expect = 0.0 Identities = 589/612 (96%) Strand = Plus / Plus Query: 1771 aggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctg 1830 |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 309 aggctcttgcgcaatgtgagcatacgctgacagagttaggaattgaacatagacaggctg 368 Query: 1831 ttgatgacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtg 1890 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 369 ttgatgacactgctggtgcagcaaagttagtcgcagaacaaatgctccaagatactggtg 428 Query: 1891 ctgttgccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattc 1950 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 429 ctgttgccagttcattagctgctgaactttatggactcgatattcttgctgaaaatattc 488 Query: 1951 aggacgaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctc 2010 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 489 aggacgaaaaagtcaatgtcacccgttttatgatgcttgctcgggaacctattatacctc 548 Query: 2011 gggttgataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaac 2070 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 549 gggttgataaaccattcaagactagtattgtgttttcacttgaagaaggacctggacagc 608 Query: 2071 tcttcaaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagcc 2130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 609 tcttcaaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatagaaagcc 668 Query: 2131 gtccacacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtcaagt 2190 |||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 669 gtccacacaagaaaaggccttttcgtgtagctgatgatgctttctccacgcgagtcaagt 728 Query: 2191 actttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcaga 2250 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 729 acttcgactacctgttttatgtcgaccttgaggcgtctatggctgatccaaaaactcaga 788 Query: 2251 acgctctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatccta 2310 | ||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||||| Sbjct: 789 atgctctcagaaatttggaggagtttgcaacttttttaagagtcctggggagctatccta 848 Query: 2311 cagacgtgagcgaagcttgaatagcaagtgcttgctgcagatcacatgttagtgattaat 2370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 cagacgtgagcgaagcttgaatagcaagtgcttgctgcagatcacatgttagtgattaat 908 Query: 2371 caagtgtgtgcc 2382 ||| |||||||| Sbjct: 909 caattgtgtgcc 920 Score = 361 bits (182), Expect = 8e-96 Identities = 200/206 (97%) Strand = Plus / Plus Query: 1484 tcaggctgttcaaaactggatagttgatagggcagtactgccacttgagaatactttggg 1543 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 106 tcaggctgttcaaaactggatagttgatagggcggtactgccacttgagaatactctggg 165 Query: 1544 cggtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagttggaga 1603 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 166 tggtagtatacatcggaactatgaccttttacttcggcatgagctgcacatagttggaga 225 Query: 1604 ggttcgccttgcagttcggcattgcttgttagccaatcgtggagtgaagatcgaaaatct 1663 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 226 ggttcgccttgcagttcggcattgcttgttagccaatcgtggagtgaagatcggaaacct 285 Query: 1664 aagaaatgtcatcagtcatccccagg 1689 |||||||||||||||||||||||||| Sbjct: 286 aagaaatgtcatcagtcatccccagg 311 Score = 180 bits (91), Expect = 2e-41 Identities = 100/103 (97%) Strand = Plus / Plus Query: 374 gcctaccagggcttccctggagcgtacagtgaggctgcagcaaagaaggcctatccaaat 433 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8 gcctaccagggcttccctggagcgtacagcgaggctgcagcaaagaaggcctatccaaat 67 Query: 434 tgccagacagtgccctgcgagcactttgatactgcgtttcagg 476 ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 68 tgccagacagtgccctgtgagcactttgatactgcatttcagg 110
>ref|NM_001056307.1| Oryza sativa (japonica cultivar-group) Os03g0286200 (Os03g0286200) mRNA, complete cds Length = 1863 Score = 509 bits (257), Expect = e-140 Identities = 493/569 (86%), Gaps = 2/569 (0%) Strand = Plus / Plus Query: 1771 aggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctg 1830 |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| |||||| Sbjct: 774 aggctcttgcacaatgtgagcacacattgacagagttcggaattgaacatagagaagctg 833 Query: 1831 ttgatgacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtg 1890 ||||||| |||||||||||||||||| || |||||||||| ||||||||||| |||| Sbjct: 834 ttgatgatactgctggtgcagcaaagactgtagcagaacaaaatctccaagataccggtg 893 Query: 1891 ctgttgccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattc 1950 | ||||||||||| | || ||||||||||||| |||| || |||||||||||||||||| Sbjct: 894 cgattgccagttcactggcagctgaactttatggactgaatgttcttgctgaaaatattc 953 Query: 1951 aggacgaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctc 2010 |||| || |||| ||||| ||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 954 aggatgacaaagataatgttacccgttttatgatgctggctcgagaaccaattatacctc 1013 Query: 2011 gggttgataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaac 2070 | ||||||||||||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 1014 gcaccgataaaccattcaagactagcatagtcttttcacttgaagaaggacctgggcaac 1073 Query: 2071 tcttcaaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagcc 2130 |||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1074 tctttaaggcacttggggtgtttgcactgagggaaatcaacctaaccaagatagaaagcc 1133 Query: 2131 gtccacacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtc-aag 2189 | |||||||||||||||||| ||||| || |||| || | || ||||||| |||| ||| Sbjct: 1134 gcccacacaagaaaaggcctcttcgtataactgacgacagcttttccacac-cgtcaaag 1192 Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcag 2249 | ||||||||||| || ||| ||||||||||||| || ||||||||||||||||||||| Sbjct: 1193 cagtttgactacctcttctatatggaccttgaggcatcaatggctgatccaaaaactcag 1252 Query: 2250 aacgctctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatcct 2309 || ||||| |||||||| ||||||| |||||||||| ||||||||| || ||||||||| Sbjct: 1253 aatgctcttggaaatttgaaggagtttgcaacctttttaagagtccttggaagctatcct 1312 Query: 2310 acagacgtgagcgaagcttgaatagcaag 2338 ||||| || | ||||||| ||||||||| Sbjct: 1313 acagatgtaaatgaagcttaaatagcaag 1341 Score = 151 bits (76), Expect = 1e-32 Identities = 106/116 (91%) Strand = Plus / Plus Query: 353 agcggggaggggctcaaggttgcctaccagggcttccctggagcgtacagtgaggctgca 412 |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||| Sbjct: 452 agcggggaggggctcaaggttgcctaccagggttgccctggagcgtacagcgaggcggca 511 Query: 413 gcaaagaaggcctatccaaattgccagacagtgccctgcgagcactttgatactgc 468 || |||||||| || |||||||||||||| |||||||| |||||||| |||||||| Sbjct: 512 gcgaagaaggcgtacccaaattgccagactgtgccctgtgagcacttcgatactgc 567 Score = 127 bits (64), Expect = 2e-25 Identities = 133/156 (85%) Strand = Plus / Plus Query: 1486 aggctgttcaaaactggatagttgatagggcagtactgccacttgagaatactttgggcg 1545 |||||||| |||||||| ||| ||| ||||||||| |||||||||||||| | ||||| | Sbjct: 573 aggctgttgaaaactggttagctgacagggcagtattgccacttgagaattcattgggtg 632 Query: 1546 gtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagttggagagg 1605 |||| |||||| |||||| ||| ||||||||||| ||| ||||||| |||||||||| Sbjct: 633 gtagcatacataggaactttgaccttttacttcgtcatagattgcacattgttggagagg 692 Query: 1606 ttcgccttgcagttcggcattgcttgttagccaatc 1641 | || ||||| ||||| |||||| |||||||||||| Sbjct: 693 tccgtcttgctgttcgtcattgcctgttagccaatc 728
>dbj|AK105065.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F05, full insert sequence Length = 1267 Score = 509 bits (257), Expect = e-140 Identities = 493/569 (86%), Gaps = 2/569 (0%) Strand = Plus / Plus Query: 1771 aggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctg 1830 |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| |||||| Sbjct: 127 aggctcttgcacaatgtgagcacacattgacagagttcggaattgaacatagagaagctg 186 Query: 1831 ttgatgacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtg 1890 ||||||| |||||||||||||||||| || |||||||||| ||||||||||| |||| Sbjct: 187 ttgatgatactgctggtgcagcaaagactgtagcagaacaaaatctccaagataccggtg 246 Query: 1891 ctgttgccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattc 1950 | ||||||||||| | || ||||||||||||| |||| || |||||||||||||||||| Sbjct: 247 cgattgccagttcactggcagctgaactttatggactgaatgttcttgctgaaaatattc 306 Query: 1951 aggacgaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctc 2010 |||| || |||| ||||| ||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 307 aggatgacaaagataatgttacccgttttatgatgctggctcgagaaccaattatacctc 366 Query: 2011 gggttgataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaac 2070 | ||||||||||||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 367 gcaccgataaaccattcaagactagcatagtcttttcacttgaagaaggacctgggcaac 426 Query: 2071 tcttcaaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagcc 2130 |||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 427 tctttaaggcacttggggtgtttgcactgagggaaatcaacctaaccaagatagaaagcc 486 Query: 2131 gtccacacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtc-aag 2189 | |||||||||||||||||| ||||| || |||| || | || ||||||| |||| ||| Sbjct: 487 gcccacacaagaaaaggcctcttcgtataactgacgacagcttttccacac-cgtcaaag 545 Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcag 2249 | ||||||||||| || ||| ||||||||||||| || ||||||||||||||||||||| Sbjct: 546 cagtttgactacctcttctatatggaccttgaggcatcaatggctgatccaaaaactcag 605 Query: 2250 aacgctctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatcct 2309 || ||||| |||||||| ||||||| |||||||||| ||||||||| || ||||||||| Sbjct: 606 aatgctcttggaaatttgaaggagtttgcaacctttttaagagtccttggaagctatcct 665 Query: 2310 acagacgtgagcgaagcttgaatagcaag 2338 ||||| || | ||||||| ||||||||| Sbjct: 666 acagatgtaaatgaagcttaaatagcaag 694 Score = 60.0 bits (30), Expect = 4e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1588 tgcacatagttggagaggttcgccttgcagttcggcattgcttgttagccaatc 1641 ||||||| ||||||||||| || ||||| ||||| |||||| |||||||||||| Sbjct: 28 tgcacattgttggagaggtccgtcttgctgttcgtcattgcctgttagccaatc 81
>dbj|AK066644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M17, full insert sequence Length = 1864 Score = 502 bits (253), Expect = e-138 Identities = 492/569 (86%), Gaps = 2/569 (0%) Strand = Plus / Plus Query: 1771 aggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctg 1830 |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| |||||| Sbjct: 775 aggctcttgcacaatgtgagcacacattgacagagttcggaattgaacatagagaagctg 834 Query: 1831 ttgatgacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtg 1890 ||||||| |||||||||||||||||| || |||||||||| ||||||||||| |||| Sbjct: 835 ttgatgatactgctggtgcagcaaagactgtagcagaacaaaatctccaagataccggtg 894 Query: 1891 ctgttgccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattc 1950 | ||||||||||| | || ||||||||||||| |||| || |||||||||||||||||| Sbjct: 895 cgattgccagttcactggcagctgaactttatggactgaatgttcttgctgaaaatattc 954 Query: 1951 aggacgaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctc 2010 |||| || |||| ||||| ||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 955 aggatgacaaagataatgttacccgttttatgatgctggctcgagaaccaattatacctc 1014 Query: 2011 gggttgataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaac 2070 | ||||||||||||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 1015 gcaccgataaaccattcaagactagcatagtcttttcacttgaagaaggacctgggcaac 1074 Query: 2071 tcttcaaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagcc 2130 |||| |||||||||| || ||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 1075 tctttaaggcacttggggtgtttgcgctgagggaaatcaacctaaccaagatagaaagcc 1134 Query: 2131 gtccacacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtc-aag 2189 | |||||||||||||||||| ||||| || |||| || | || ||||||| |||| ||| Sbjct: 1135 gcccacacaagaaaaggcctcttcgtataactgacgacagcttttccacac-cgtcaaag 1193 Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcag 2249 | ||||||||||| || ||| ||||||||||||| || ||||||||||||||||||||| Sbjct: 1194 cagtttgactacctcttctatatggaccttgaggcatcaatggctgatccaaaaactcag 1253 Query: 2250 aacgctctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatcct 2309 || ||||| |||||||| ||||||| |||||||||| ||||||||| || ||||||||| Sbjct: 1254 aatgctcttggaaatttgaaggagtttgcaacctttttaagagtccttggaagctatcct 1313 Query: 2310 acagacgtgagcgaagcttgaatagcaag 2338 ||||| || | ||||||| ||||||||| Sbjct: 1314 acagatgtaaatgaagcttaaatagcaag 1342 Score = 151 bits (76), Expect = 1e-32 Identities = 106/116 (91%) Strand = Plus / Plus Query: 353 agcggggaggggctcaaggttgcctaccagggcttccctggagcgtacagtgaggctgca 412 |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||| Sbjct: 453 agcggggaggggctcaaggttgcctaccagggttgccctggagcgtacagcgaggcggca 512 Query: 413 gcaaagaaggcctatccaaattgccagacagtgccctgcgagcactttgatactgc 468 || |||||||| || |||||||||||||| |||||||| |||||||| |||||||| Sbjct: 513 gcgaagaaggcgtacccaaattgccagactgtgccctgtgagcacttcgatactgc 568 Score = 127 bits (64), Expect = 2e-25 Identities = 133/156 (85%) Strand = Plus / Plus Query: 1486 aggctgttcaaaactggatagttgatagggcagtactgccacttgagaatactttgggcg 1545 |||||||| |||||||| ||| ||| ||||||||| |||||||||||||| | ||||| | Sbjct: 574 aggctgttgaaaactggttagctgacagggcagtattgccacttgagaattcattgggtg 633 Query: 1546 gtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagttggagagg 1605 |||| |||||| |||||| ||| ||||||||||| ||| ||||||| |||||||||| Sbjct: 634 gtagcatacataggaactttgaccttttacttcgtcatagattgcacattgttggagagg 693 Query: 1606 ttcgccttgcagttcggcattgcttgttagccaatc 1641 | || ||||| ||||| |||||| |||||||||||| Sbjct: 694 tccgtcttgctgttcgtcattgcctgttagccaatc 729
>ref|NM_001067275.1| Oryza sativa (japonica cultivar-group) Os07g0694600 (Os07g0694600) mRNA, complete cds Length = 1502 Score = 311 bits (157), Expect = 7e-81 Identities = 457/557 (82%) Strand = Plus / Plus Query: 1776 cttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctgttgat 1835 ||||| || ||||| || ||||||||| |||| || || || |||||| |||||||||| Sbjct: 646 cttgcacagtgtgaacaaacactgacaaagttaggcatcgagcatagagaagctgttgac 705 Query: 1836 gacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtgctgtt 1895 || || || |||||||||||| | |||||||||||| |||||| || ||||| || ||| Sbjct: 706 gatacagcaggtgcagcaaagcttattgcagaacaaaagctccaggacactggagcagtt 765 Query: 1896 gccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattcaggac 1955 || |||||||| || ||| ||||||||| ||||||||||||||| |||||||||||||| Sbjct: 766 gctagttcattggcagctcaactttatggactggatattcttgcagaaaatattcaggat 825 Query: 1956 gaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggtt 2015 || | | ||||| || |||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 826 gacaccgataatgtaacacgctttatgatgctggctcgggaacccattattcctcgtact 885 Query: 2016 gataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaactcttc 2075 ||||| ||||||||||||||||| || ||||| | |||||||| || || ||||| || Sbjct: 886 gataagccattcaagactagcatagtcttttctttggaagaagggcctgggcaactattt 945 Query: 2076 aaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagccgtcca 2135 ||||| || ||||| ||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 946 aaggcgctggcagtgtttgcactgagaaaaattaacctcaccaagatggaaagccgtcca 1005 Query: 2136 cacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtcaagtacttt 2195 |||||||||| |||| | ||| |||||||||||| || || ||| | ||| | || Sbjct: 1006 cacaagaaaaagcctctacgtatagctgatgataattgttctgcaccattgaagcatttc 1065 Query: 2196 gactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcagaacgct 2255 |||||||| || ||||| || ||||||||||| |||||||||||||| |||| || ||| Sbjct: 1066 gactacctcttctatgtagatcttgaggcgtcaatggctgatccaaatgctcaaaatgct 1125 Query: 2256 ctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatcctacagac 2315 || ||| || ||||||||||||||||| |||||| || |||||||||||||| || Sbjct: 1126 ctggcaaacttaaaggagttcgcaacctttctaagagttcttgggagctatcctaccgat 1185 Query: 2316 gtgagcgaagcttgaat 2332 || || ||||| ||||| Sbjct: 1186 gtcagtgaagcatgaat 1202 Score = 137 bits (69), Expect = 2e-28 Identities = 123/141 (87%) Strand = Plus / Plus Query: 1521 ctgccacttgagaatactttgggcggtagtatacatcggaactatgatcttttacttcgg 1580 ||||||||||||||| | ||||| ||||| || ||||| |||||||| ||| ||||||| Sbjct: 475 ctgccacttgagaattccttgggtggtagcatccatcgaaactatgaccttctacttcgc 534 Query: 1581 catgagctgcacatagttggagaggttcgccttgcagttcggcattgcttgttagccaat 1640 ||| ||||||||| ||||| ||||| |||||||||||||| |||||||||||||| ||| Sbjct: 535 cataggctgcacattgttggtgaggtgcgccttgcagttcgccattgcttgttagcaaat 594 Query: 1641 cgtggagtgaagatcgaaaat 1661 ||||| ||||||||| ||||| Sbjct: 595 cgtggtgtgaagatccaaaat 615 Score = 50.1 bits (25), Expect = 0.040 Identities = 106/133 (79%) Strand = Plus / Plus Query: 321 ggcctctcactagtgcggatctaatggagtcgagcggggaggggctcaaggttgcctacc 380 |||| ||||| || |||||||| |||||| | ||||| || || | ||||| || |||| Sbjct: 287 ggccgctcaccagcgcggatctgatggaggccagcggagacggtttgaaggtcgcatacc 346 Query: 381 agggcttccctggagcgtacagtgaggctgcagcaaagaaggcctatccaaattgccaga 440 |||| | ||| || || ||||||||||| || || |||||||| || || | |||||| | Sbjct: 347 agggatgcccgggtgcctacagtgaggccgccgccaagaaggcgtacccgagttgccaca 406 Query: 441 cagtgccctgcga 453 | ||||||||||| Sbjct: 407 ccgtgccctgcga 419
>dbj|AK066428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059A18, full insert sequence Length = 1507 Score = 311 bits (157), Expect = 7e-81 Identities = 457/557 (82%) Strand = Plus / Plus Query: 1776 cttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctgttgat 1835 ||||| || ||||| || ||||||||| |||| || || || |||||| |||||||||| Sbjct: 651 cttgcacagtgtgaacaaacactgacaaagttaggcatcgagcatagagaagctgttgac 710 Query: 1836 gacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtgctgtt 1895 || || || |||||||||||| | |||||||||||| |||||| || ||||| || ||| Sbjct: 711 gatacagcaggtgcagcaaagcttattgcagaacaaaagctccaggacactggagcagtt 770 Query: 1896 gccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattcaggac 1955 || |||||||| || ||| ||||||||| ||||||||||||||| |||||||||||||| Sbjct: 771 gctagttcattggcagctcaactttatggactggatattcttgcagaaaatattcaggat 830 Query: 1956 gaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggtt 2015 || | | ||||| || |||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 831 gacaccgataatgtaacacgctttatgatgctggctcgggaacccattattcctcgtact 890 Query: 2016 gataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaactcttc 2075 ||||| ||||||||||||||||| || ||||| | |||||||| || || ||||| || Sbjct: 891 gataagccattcaagactagcatagtcttttctttggaagaagggcctgggcaactattt 950 Query: 2076 aaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagccgtcca 2135 ||||| || ||||| ||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 951 aaggcgctggcagtgtttgcactgagaaaaattaacctcaccaagatggaaagccgtcca 1010 Query: 2136 cacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtcaagtacttt 2195 |||||||||| |||| | ||| |||||||||||| || || ||| | ||| | || Sbjct: 1011 cacaagaaaaagcctctacgtatagctgatgataattgttctgcaccattgaagcatttc 1070 Query: 2196 gactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcagaacgct 2255 |||||||| || ||||| || ||||||||||| |||||||||||||| |||| || ||| Sbjct: 1071 gactacctcttctatgtagatcttgaggcgtcaatggctgatccaaatgctcaaaatgct 1130 Query: 2256 ctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatcctacagac 2315 || ||| || ||||||||||||||||| |||||| || |||||||||||||| || Sbjct: 1131 ctggcaaacttaaaggagttcgcaacctttctaagagttcttgggagctatcctaccgat 1190 Query: 2316 gtgagcgaagcttgaat 2332 || || ||||| ||||| Sbjct: 1191 gtcagtgaagcatgaat 1207 Score = 137 bits (69), Expect = 2e-28 Identities = 123/141 (87%) Strand = Plus / Plus Query: 1521 ctgccacttgagaatactttgggcggtagtatacatcggaactatgatcttttacttcgg 1580 ||||||||||||||| | ||||| ||||| || ||||| |||||||| ||| ||||||| Sbjct: 480 ctgccacttgagaattccttgggtggtagcatccatcgaaactatgaccttctacttcgc 539 Query: 1581 catgagctgcacatagttggagaggttcgccttgcagttcggcattgcttgttagccaat 1640 ||| ||||||||| ||||| ||||| |||||||||||||| |||||||||||||| ||| Sbjct: 540 cataggctgcacattgttggtgaggtgcgccttgcagttcgccattgcttgttagcaaat 599 Query: 1641 cgtggagtgaagatcgaaaat 1661 ||||| ||||||||| ||||| Sbjct: 600 cgtggtgtgaagatccaaaat 620 Score = 50.1 bits (25), Expect = 0.040 Identities = 106/133 (79%) Strand = Plus / Plus Query: 321 ggcctctcactagtgcggatctaatggagtcgagcggggaggggctcaaggttgcctacc 380 |||| ||||| || |||||||| |||||| | ||||| || || | ||||| || |||| Sbjct: 292 ggccgctcaccagcgcggatctgatggaggccagcggagacggtttgaaggtcgcatacc 351 Query: 381 agggcttccctggagcgtacagtgaggctgcagcaaagaaggcctatccaaattgccaga 440 |||| | ||| || || ||||||||||| || || |||||||| || || | |||||| | Sbjct: 352 agggatgcccgggtgcctacagtgaggccgccgccaagaaggcgtacccgagttgccaca 411 Query: 441 cagtgccctgcga 453 | ||||||||||| Sbjct: 412 ccgtgccctgcga 424
>gb|AY106209.1| Zea mays PCO092896 mRNA sequence Length = 1473 Score = 299 bits (151), Expect = 3e-77 Identities = 446/542 (82%), Gaps = 3/542 (0%) Strand = Plus / Plus Query: 1771 aggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagctg 1830 |||| |||||||||||||| || ||| | |||| | ||||||||||||||| | |||| Sbjct: 286 aggctcttgcgcaatgtgaacacacattaacaggactaggaattgaacatagagaggctg 345 Query: 1831 ttgatgacactgctggtgcagcaaagttagttgcagaacaaatgctccaagatactggtg 1890 |||| ||||||||||||||||||||| | ||||||||||| ||| |||| |||||||||| Sbjct: 346 ttgacgacactgctggtgcagcaaagattgttgcagaacatatggtccaggatactggtg 405 Query: 1891 ctgttgccagttcattagctgctgaactttatgaactggatattcttgctgaaaatattc 1950 || |||| |||||||| |||||| |||| |||| | ||||| |||||||||| ||||||| Sbjct: 406 ctattgctagttcattggctgctaaactctatggattggatgttcttgctgagaatattc 465 Query: 1951 aggacgaaaaagtcaatgtcacccgctttatgatgcttgctcgggaacctattatacctc 2010 |||| | ||| ||||||||||| ||||||||||| ||||| |||| | || | || Sbjct: 466 aggatggcaaaaataatgtcacccgttttatgatgctagctcgaaaacccaacattcttc 525 Query: 2011 gggttgataaaccattcaagactagcattgtgttttcacttgaagaaggacccggacaac 2070 | ||||| |||||| ||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 526 gcaatgatagaccatttaagacaagcatagtcttttcactagaagaaggacatggacaac 585 Query: 2071 tcttcaaggcacttgcagtttttgcactgagggaaatcaacctcaccaagatcgaaagcc 2130 |||| | ||| |||| || || |||| |||| ||||||||||||| ||||||||||| | Sbjct: 586 tctttagggcgcttggtgtattcgcacagaggaaaatcaacctcacaaagatcgaaagtc 645 Query: 2131 gtccacacaagaaaaggccttttcgtgtagctgatgatactttctccacacgcgtcaagt 2190 ||||||||||| | |||||| |||| ||| |||||| ||| | ||| ||| | | ||| Sbjct: 646 gtccacacaaggagaggcctcttcgagtatctgatg--actgt-tcctcactcttaaaga 702 Query: 2191 actttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcaga 2250 | ||||| ||||| ||||| || |||||||| || || |||||||||||||| | ||||| Sbjct: 703 attttgattacctcttttacgttgaccttgaagcatcaatggctgatccaaagattcaga 762 Query: 2251 acgctctcagaaatttggaggagttcgcaaccttttcaagagtcctagggagctatccta 2310 | ||||| ||||| || ||||||| |||||||||| ||||||||| || |||||||||| Sbjct: 763 atgctcttggaaatctgaaggagtttgcaacctttttaagagtcctcggaagctatccta 822 Query: 2311 ca 2312 || Sbjct: 823 ca 824 Score = 170 bits (86), Expect = 2e-38 Identities = 176/206 (85%) Strand = Plus / Plus Query: 1484 tcaggctgttcaaaactggatagttgatagggcagtactgccacttgagaatactttggg 1543 ||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||| Sbjct: 83 tcaggctgttcaaaactgggtagttgatagggcagtgctgccacttgagaattcattggg 142 Query: 1544 cggtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagttggaga 1603 ||||| |||||||||||||||||||| || ||| |||| ||||||| || ||||| Sbjct: 143 aggtagcatacatcggaactatgatctattggttcagcatagtttgcacattgtcggaga 202 Query: 1604 ggttcgccttgcagttcggcattgcttgttagccaatcgtggagtgaagatcgaaaatct 1663 |||||||||| |||| ||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 203 agttcgccttgaggttcaccattgcttgttagccaatcctggtgtgaagattgaaaatct 262 Query: 1664 aagaaatgtcatcagtcatccccagg 1689 | || ||| || || |||||||||| Sbjct: 263 gaaaagtgttatgagccatccccagg 288 Score = 63.9 bits (32), Expect = 3e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 397 gtacagtgaggctgcagcaaagaaggcctatccaaattgccagacagtgccctgcgagca 456 |||||| || || |||||||||||||| || |||||||| || | |||||||| ||||| Sbjct: 8 gtacagcgaagcggcagcaaagaaggcatacccaaattgtgaggctgtgccctgtgagca 67 Query: 457 ctttgatactgcgtttcagg 476 |||||| ||||| ||||||| Sbjct: 68 ctttgacactgcatttcagg 87
>gb|AY109614.1| Zea mays CL342_2 mRNA sequence Length = 799 Score = 208 bits (105), Expect = 7e-50 Identities = 207/241 (85%) Strand = Plus / Plus Query: 1927 tggatattcttgctgaaaatattcaggacgaaaaagtcaatgtcacccgctttatgatgc 1986 ||||| |||||||||| ||||||||||| || |||| ||||||||||| |||||||||| Sbjct: 24 tggatgttcttgctgagaatattcaggatgacaaagataatgtcacccgttttatgatgc 83 Query: 1987 ttgctcgggaacctattatacctcgggttgataaaccattcaagactagcattgtgtttt 2046 | ||||| ||||| || |||||||| |||||||||||| ||||| ||||| || |||| Sbjct: 84 tagctcgagaacccatcatacctcgcactgataaaccatttaagacaagcatagtctttt 143 Query: 2047 cacttgaagaaggacccggacaactcttcaaggcacttgcagtttttgcactgagggaaa 2106 |||| ||||||||||| ||||| ||||| ||||||||||| || |||||| ||||||| | Sbjct: 144 cactagaagaaggacctggacagctctttaaggcacttgctgtatttgcattgagggaca 203 Query: 2107 tcaacctcaccaagatcgaaagccgtccacacaagaaaaggccttttcgtgtagctgatg 2166 |||||||||| ||||| ||||| |||||||| ||| |||||||| |||| ||| |||||| Sbjct: 204 tcaacctcacaaagattgaaagtcgtccacataaggaaaggcctcttcgggtatctgatg 263 Query: 2167 a 2167 | Sbjct: 264 a 264 Score = 63.9 bits (32), Expect = 3e-06 Identities = 90/111 (81%) Strand = Plus / Plus Query: 2209 atgtggaccttgaggcgtctatggctgatccaaaaactcagaacgctctcagaaatttgg 2268 |||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| || Sbjct: 303 atgttgaccttgaagcatcaatggctgatccaaagactcagaatgctcttggaaatctga 362 Query: 2269 aggagttcgcaaccttttcaagagtcctagggagctatcctacagacgtga 2319 ||||||| ||||| |||||| || || |||||||||||||| |||| Sbjct: 363 aggagtttgcaacannnnnaagagttcttggaagctatcctacagatgtga 413
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 137 bits (69), Expect = 2e-28 Identities = 123/141 (87%) Strand = Plus / Minus Query: 1521 ctgccacttgagaatactttgggcggtagtatacatcggaactatgatcttttacttcgg 1580 ||||||||||||||| | ||||| ||||| || ||||| |||||||| ||| ||||||| Sbjct: 29528572 ctgccacttgagaattccttgggtggtagcatccatcgaaactatgaccttctacttcgc 29528513 Query: 1581 catgagctgcacatagttggagaggttcgccttgcagttcggcattgcttgttagccaat 1640 ||| ||||||||| ||||| ||||| |||||||||||||| |||||||||||||| ||| Sbjct: 29528512 cataggctgcacattgttggtgaggtgcgccttgcagttcgccattgcttgttagcaaat 29528453 Query: 1641 cgtggagtgaagatcgaaaat 1661 ||||| ||||||||| ||||| Sbjct: 29528452 cgtggtgtgaagatccaaaat 29528432 Score = 97.6 bits (49), Expect = 2e-16 Identities = 82/93 (88%) Strand = Plus / Minus Query: 1861 ttgcagaacaaatgctccaagatactggtgctgttgccagttcattagctgctgaacttt 1920 |||||||||||| |||||| || ||||| || ||||| |||||||| || ||| |||||| Sbjct: 29528060 ttgcagaacaaaagctccaggacactggagcagttgctagttcattggcagctcaacttt 29528001 Query: 1921 atgaactggatattcttgctgaaaatattcagg 1953 ||| ||||||||||||||| ||||||||||||| Sbjct: 29528000 atggactggatattcttgcagaaaatattcagg 29527968 Score = 61.9 bits (31), Expect = 1e-05 Identities = 46/51 (90%) Strand = Plus / Minus Query: 2119 agatcgaaagccgtccacacaagaaaaggccttttcgtgtagctgatgata 2169 |||| |||||||||||||||||||||| |||| | ||| |||||||||||| Sbjct: 29527526 agatggaaagccgtccacacaagaaaaagcctctacgtatagctgatgata 29527476 Score = 60.0 bits (30), Expect = 4e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 1965 aatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggttgataaacca 2024 ||||| || |||||||||||||| ||||||||||| ||||| ||||| |||||| ||| Sbjct: 29527876 aatgtaacacgctttatgatgctggctcgggaacccattattcctcgtactgataagcca 29527817 Query: 2025 ttcaag 2030 |||||| Sbjct: 29527816 ttcaag 29527811 Score = 56.0 bits (28), Expect = 6e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 2269 aggagttcgcaaccttttcaagagtcctagggagctatcctacagacgtgagcgaagctt 2328 ||||||||||||||||| |||||| || |||||||||||||| || || || ||||| | Sbjct: 29527206 aggagttcgcaacctttctaagagttcttgggagctatcctaccgatgtcagtgaagcat 29527147 Query: 2329 gaat 2332 |||| Sbjct: 29527146 gaat 29527143 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 2029 agactagcattgtgttttcacttgaagaaggacccggacaactcttcaaggcacttgcag 2088 |||||||||| || ||||| | |||||||| || || ||||| || ||||| || |||| Sbjct: 29527724 agactagcatagtcttttctttggaagaagggcctgggcaactatttaaggcgctggcag 29527665 Query: 2089 tttttgcactgagggaaatcaacctcaccaag 2120 | ||||||||||| |||| |||||||||||| Sbjct: 29527664 tgtttgcactgagaaaaattaacctcaccaag 29527633 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 675 tgtttattactccctccgttcctaaatataagtcttttt 713 |||||||||||||||||||||| ||||||| || ||||| Sbjct: 24423443 tgtttattactccctccgttccaaaatataggtattttt 24423481 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 2196 gactacctgttttatgtggaccttgaggcgtctatggctgatccaaa 2242 |||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 29527351 gactacctcttctatgtagatcttgaggcgtcaatggctgatccaaa 29527305 Score = 54.0 bits (27), Expect = 0.003 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1770 taggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagct 1829 ||||| ||||| || ||||| || ||||||||| |||| || || || |||||| ||||| Sbjct: 29528303 taggctcttgcacagtgtgaacaaacactgacaaagttaggcatcgagcatagagaagct 29528244 Query: 1830 gttgatgacactgctggtgcagcaaag 1856 ||||| || || || |||||||||||| Sbjct: 29528243 gttgacgatacagcaggtgcagcaaag 29528217 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||| |||||||||||||||||||||| Sbjct: 1470568 tttagtactccctccgttcctaaatat 1470542 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1017 cttatatttaagaagggagggagtagatgca 1047 |||||||||||||| |||||||||| ||||| Sbjct: 3720293 cttatatttaagaacggagggagtacatgca 3720323 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 674 ttgtttattactccctccgttcctaaatata 704 |||| ||||||||||||||||||| |||||| Sbjct: 8426705 ttgtgtattactccctccgttccttaatata 8426675 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 22931223 attactccctccgttccaaaatataag 22931249 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||||| ||||||||| Sbjct: 11160589 ttattactccctccgtccctaaatat 11160614 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||||| |||||||||| Sbjct: 3720317 tactccctccgttcttaaatataag 3720293 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatat 703 ||||||||||||||| ||||||||| Sbjct: 6974488 tattactccctccgtccctaaatat 6974512 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataa 705 |||||||||||||||| |||||||| Sbjct: 15366281 ttactccctccgttccaaaatataa 15366257 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 19147054 tactccctccgttccaaaatataag 19147078 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataag 706 |||||||||||||| |||| ||||||||| Sbjct: 23322114 ttattactccctccattccaaaatataag 23322142 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 24877457 tactccctccgtccctaaatataag 24877433
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 137 bits (69), Expect = 2e-28 Identities = 123/141 (87%) Strand = Plus / Minus Query: 1521 ctgccacttgagaatactttgggcggtagtatacatcggaactatgatcttttacttcgg 1580 ||||||||||||||| | ||||| ||||| || ||||| |||||||| ||| ||||||| Sbjct: 55244 ctgccacttgagaattccttgggtggtagcatccatcgaaactatgaccttctacttcgc 55185 Query: 1581 catgagctgcacatagttggagaggttcgccttgcagttcggcattgcttgttagccaat 1640 ||| ||||||||| ||||| ||||| |||||||||||||| |||||||||||||| ||| Sbjct: 55184 cataggctgcacattgttggtgaggtgcgccttgcagttcgccattgcttgttagcaaat 55125 Query: 1641 cgtggagtgaagatcgaaaat 1661 ||||| ||||||||| ||||| Sbjct: 55124 cgtggtgtgaagatccaaaat 55104 Score = 97.6 bits (49), Expect = 2e-16 Identities = 82/93 (88%) Strand = Plus / Minus Query: 1861 ttgcagaacaaatgctccaagatactggtgctgttgccagttcattagctgctgaacttt 1920 |||||||||||| |||||| || ||||| || ||||| |||||||| || ||| |||||| Sbjct: 54732 ttgcagaacaaaagctccaggacactggagcagttgctagttcattggcagctcaacttt 54673 Query: 1921 atgaactggatattcttgctgaaaatattcagg 1953 ||| ||||||||||||||| ||||||||||||| Sbjct: 54672 atggactggatattcttgcagaaaatattcagg 54640 Score = 61.9 bits (31), Expect = 1e-05 Identities = 46/51 (90%) Strand = Plus / Minus Query: 2119 agatcgaaagccgtccacacaagaaaaggccttttcgtgtagctgatgata 2169 |||| |||||||||||||||||||||| |||| | ||| |||||||||||| Sbjct: 54198 agatggaaagccgtccacacaagaaaaagcctctacgtatagctgatgata 54148 Score = 60.0 bits (30), Expect = 4e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 1965 aatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggttgataaacca 2024 ||||| || |||||||||||||| ||||||||||| ||||| ||||| |||||| ||| Sbjct: 54548 aatgtaacacgctttatgatgctggctcgggaacccattattcctcgtactgataagcca 54489 Query: 2025 ttcaag 2030 |||||| Sbjct: 54488 ttcaag 54483 Score = 56.0 bits (28), Expect = 6e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 2269 aggagttcgcaaccttttcaagagtcctagggagctatcctacagacgtgagcgaagctt 2328 ||||||||||||||||| |||||| || |||||||||||||| || || || ||||| | Sbjct: 53878 aggagttcgcaacctttctaagagttcttgggagctatcctaccgatgtcagtgaagcat 53819 Query: 2329 gaat 2332 |||| Sbjct: 53818 gaat 53815 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 2029 agactagcattgtgttttcacttgaagaaggacccggacaactcttcaaggcacttgcag 2088 |||||||||| || ||||| | |||||||| || || ||||| || ||||| || |||| Sbjct: 54396 agactagcatagtcttttctttggaagaagggcctgggcaactatttaaggcgctggcag 54337 Query: 2089 tttttgcactgagggaaatcaacctcaccaag 2120 | ||||||||||| |||| |||||||||||| Sbjct: 54336 tgtttgcactgagaaaaattaacctcaccaag 54305 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 2196 gactacctgttttatgtggaccttgaggcgtctatggctgatccaaa 2242 |||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 54023 gactacctcttctatgtagatcttgaggcgtcaatggctgatccaaa 53977 Score = 54.0 bits (27), Expect = 0.003 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1770 taggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacatagacaagct 1829 ||||| ||||| || ||||| || ||||||||| |||| || || || |||||| ||||| Sbjct: 54975 taggctcttgcacagtgtgaacaaacactgacaaagttaggcatcgagcatagagaagct 54916 Query: 1830 gttgatgacactgctggtgcagcaaag 1856 ||||| || || || |||||||||||| Sbjct: 54915 gttgacgatacagcaggtgcagcaaag 54889
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 133 bits (67), Expect = 3e-27 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 923 gagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatc 982 ||||||||||||||||||||||||||||||||||||| |||| |||||||||| | |||| Sbjct: 12715 gagactacatacggagcaaaatgagtgaatctacactttaaaatatgtctata-tacatc 12773 Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| | ||||| || ||||||||||||||||||| ||| |||||||||| Sbjct: 12774 cgtatgtagtcctctagtgaaatctctaaaaagacttatattatggaacggagggagta 12832 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||||||||||||||||||||||| || |||||||||| |||||||| Sbjct: 12669 tactccctccgttcctaaatataagtcttttaagcgatttcactaagagactac 12722 Score = 67.9 bits (34), Expect = 2e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 |||||||||||||| |||||| || | || |||||||||||||||| ||| ||||||||| Sbjct: 12729 tccgtatgtagtctcttagtgaaatcgcttaaaagacttatatttaggaacggagggagt 12670 Query: 1041 ag 1042 || Sbjct: 12669 ag 12668 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcactag 12787
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 129 bits (65), Expect = 5e-26 Identities = 105/117 (89%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||||||||||||||||||||| | | |||| ||||||||||| | ||||| Sbjct: 76927 gactacatacggagcaaaatgagtgaatctatattctaaaatatgtctatatac-atccg 76869 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||| Sbjct: 76868 aatgtagtctactagtgaaacctctaaaaagacttatatttaggaacggagggagta 76812 Score = 103 bits (52), Expect = 3e-18 Identities = 101/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||||||||||| |||||||||||| |||| |||||||||| | ||||| || Sbjct: 29947 ctacatacggagcaaaatgattgaatctacactctaaaatatgtctata-tgcatccata 29889 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||| |||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 29888 tgtagttcactagtaaaacctctaaaaagacttatatttagaaacggagggagtag 29833 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 |||||||||||||||||||||||||||||||||| | ||||||||| ||||||| Sbjct: 76812 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactac 76865 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 76975 tactccctccgttcctaaatataagtctttttagagatttcgctag 76930 Score = 73.8 bits (37), Expect = 3e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||||| | ||| | || ||||||||||||||||||||| ||| ||||||||| Sbjct: 76915 tccgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaacggagggagt 76974 Query: 1041 agatg 1045 ||||| Sbjct: 76975 agatg 76979 Score = 63.9 bits (32), Expect = 3e-06 Identities = 100/120 (83%), Gaps = 2/120 (1%) Strand = Plus / Minus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||||||| |||||||||||||||| ||||| || ||| |||| ||||||||| | ||| Sbjct: 23168 ggagactatatacggagcaaaatgaatgaatatatactttaaaatatgtctat-gtacat 23110 Query: 982 ccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| || |||| || || ||||| | |||||||||| || |||||||||| Sbjct: 23109 ccgtatgtagt-ttatagtacaatctttaaaaggtcttatatttagaaacggagggagta 23051 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||| |||||||||||||||||||| Sbjct: 29834 tactccctccgtttctaaatataagtctttttag 29867 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagacta 734 |||||||||||||| ||||||||| | |||||| ||||||| |||||||||| Sbjct: 23213 tactccctccgttctaaaatataagaccttttagggatttcattaggagacta 23161 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||| |||||| ||||||||||||||||| || ||||| |||| Sbjct: 30000 tattactccatccgtttctaaatataagtcttttaagcgattttacta 29953 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||| ||||||||||| Sbjct: 23051 tactccctccgtttctaaatataag 23075
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 129 bits (65), Expect = 5e-26 Identities = 134/157 (85%) Strand = Plus / Plus Query: 1485 caggctgttcaaaactggatagttgatagggcagtactgccacttgagaatactttgggc 1544 ||||||||| |||||||| ||| ||| ||||||||| |||||||||||||| | ||||| Sbjct: 9835686 caggctgttgaaaactggttagctgacagggcagtattgccacttgagaattcattgggt 9835745 Query: 1545 ggtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagttggagag 1604 ||||| |||||| |||||| ||| ||||||||||| ||| ||||||| ||||||||| Sbjct: 9835746 ggtagcatacataggaactttgaccttttacttcgtcatagattgcacattgttggagag 9835805 Query: 1605 gttcgccttgcagttcggcattgcttgttagccaatc 1641 || || ||||| ||||| |||||| |||||||||||| Sbjct: 9835806 gtccgtcttgctgttcgtcattgcctgttagccaatc 9835842 Score = 121 bits (61), Expect = 1e-23 Identities = 85/93 (91%) Strand = Plus / Plus Query: 1764 aattcttaggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacataga 1823 |||||| |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 9835963 aattctcaggctcttgcacaatgtgagcacacattgacagagttcggaattgaacataga 9836022 Query: 1824 caagctgttgatgacactgctggtgcagcaaag 1856 ||||||||||||| |||||||||||||||||| Sbjct: 9836023 gaagctgttgatgatactgctggtgcagcaaag 9836055 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Plus Query: 2029 agactagcattgtgttttcacttgaagaaggacccggacaactcttcaaggcacttgcag 2088 |||||||||| || |||||||||||||||||||| || |||||||| |||||||||| | Sbjct: 9836546 agactagcatagtcttttcacttgaagaaggacctgggcaactctttaaggcacttgggg 9836605 Query: 2089 tttttgcactgagggaaatcaacctcaccaag 2120 | ||||||||||||||||||||||| |||||| Sbjct: 9836606 tgtttgcactgagggaaatcaacctaaccaag 9836637 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 388 ccctggagcgtacagtgaggctgcagcaaagaaggcctatccaaattgccagacagtgcc 447 ||||||||||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| Sbjct: 9834700 ccctggagcgtacagcgaggcggcagcgaagaaggcgtacccaaattgccagactgtgcc 9834759 Query: 448 ctgcgagcactttgatactgc 468 ||| |||||||| |||||||| Sbjct: 9834760 ctgtgagcacttcgatactgc 9834780 Score = 93.7 bits (47), Expect = 3e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 1863 gcagaacaaatgctccaagatactggtgctgttgccagttcattagctgctgaactttat 1922 |||||||||| ||||||||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 9836204 gcagaacaaaatctccaagataccggtgcgattgccagttcactggcagctgaactttat 9836263 Query: 1923 gaactggatattcttgctgaaaatattcagg 1953 | |||| || ||||||||||||||||||||| Sbjct: 9836264 ggactgaatgttcttgctgaaaatattcagg 9836294 Score = 85.7 bits (43), Expect = 7e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 2193 tttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcagaac 2252 ||||||||||| || ||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 9836944 tttgactacctcttctatatggaccttgaggcatcaatggctgatccaaaaactcagaat 9837003 Query: 2253 gctctcagaaatttg 2267 ||||| |||||||| Sbjct: 9837004 gctcttggaaatttg 9837018 Score = 69.9 bits (35), Expect = 4e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 2269 aggagttcgcaaccttttcaagagtcctagggagctatcctacagacgtgagcgaagctt 2328 ||||||| |||||||||| ||||||||| || |||||||||||||| || | ||||||| Sbjct: 9837088 aggagtttgcaacctttttaagagtccttggaagctatcctacagatgtaaatgaagctt 9837147 Query: 2329 gaatagcaagtgcttgctgcagatcacatgttagt 2363 ||||||||| | | ||||| |||||||| |||| Sbjct: 9837148 aaatagcaagcaccttctgcatatcacatgctagt 9837182 Score = 61.9 bits (31), Expect = 1e-05 Identities = 31/31 (100%) Strand = Plus / Plus Query: 353 agcggggaggggctcaaggttgcctaccagg 383 ||||||||||||||||||||||||||||||| Sbjct: 9834527 agcggggaggggctcaaggttgcctaccagg 9834557 Score = 60.0 bits (30), Expect = 4e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1965 aatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggttgataaacca 2024 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 9836380 aatgttacccgttttatgatgctggctcgagaaccaattatacctcgcaccgataaacca 9836439 Query: 2025 ttcaag 2030 |||||| Sbjct: 9836440 ttcaag 9836445 Score = 52.0 bits (26), Expect = 0.010 Identities = 35/38 (92%) Strand = Plus / Plus Query: 2119 agatcgaaagccgtccacacaagaaaaggccttttcgt 2156 |||| |||||||| |||||||||||||||||| ||||| Sbjct: 9836731 agatagaaagccgcccacacaagaaaaggcctcttcgt 9836768 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataag 706 |||||||||||||||||| ||||||||| Sbjct: 30930671 tattactccctccgttccaaaatataag 30930644 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatata 704 |||||||||||||||||||| ||||||| Sbjct: 34953313 tttattactccctccgttccaaaatata 34953340 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 674 ttgtttattactccctccgttcctaaatata 704 ||||||||||||| ||||||||| ||||||| Sbjct: 7923108 ttgtttattactcactccgttccaaaatata 7923138 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||||||||||||||||| |||||||| Sbjct: 16172448 tttattactccctccgtttctaaatat 16172422 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 95 accacctcctcctcttcgtcgtcctcctcc 124 |||||||||||||| ||||| ||||||||| Sbjct: 8160869 accacctcctcctcgtcgtcatcctcctcc 8160840 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 12849054 tactccctccgtcccaaaatataagtatttttag 12849021 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 22697311 tactccctccgttcctaaatat 22697332 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1009 taaaaagacttatatttaagaagggagggagtag 1042 |||||| |||||||||| |||| ||||||||||| Sbjct: 31891942 taaaaatacttatattttagaacggagggagtag 31891909 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 32816783 tactccctccgttccaaaatataagcatttttag 32816750 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 1477236 tactccctccgttccgaaatataag 1477260 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 2570040 tactccctccgttccaaaatataag 2570064 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||| ||||||||||||||| Sbjct: 3478593 tactccctctgttcctaaatataag 3478569 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataa 705 |||||||||||||||| |||||||| Sbjct: 3987557 ttactccctccgttccaaaatataa 3987533 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 4448337 tactccctccgtccctaaatataag 4448313 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 10400887 tactccctccgtccctaaatataag 10400863 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 14438926 tactccctccgttccaaaatataag 14438902 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 16464073 tactccctccgttccaaaatataag 16464097 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 18239786 tactccctccgttccaaaatataag 18239762 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataagtc 708 |||||||||||| |||| ||||||||||| Sbjct: 24632170 attactccctccattccaaaatataagtc 24632198 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 25731679 tactccctccgtccctaaatataag 25731655 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 26007186 tactccctccgtccctaaatataag 26007162 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 27066250 tactccctccgtccctaaatataag 27066226 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 27155182 tactccctccgtccctaaatataag 27155206 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 27155329 tactccctccgtccctaaatataag 27155305 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 29396743 tactccctccgtccctaaatataag 29396767 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 ctcttcgtcgtcctcctcccc 126 ||||||||||||||||||||| Sbjct: 30893616 ctcttcgtcgtcctcctcccc 30893596 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttta 714 |||||||||||||| |||||||||| |||||| Sbjct: 31891910 tactccctccgttctaaaatataagtattttta 31891942 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 33528392 tactccctccgtccctaaatataag 33528416 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 34516107 tactccctccgttccaaaatataag 34516131
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 129 bits (65), Expect = 5e-26 Identities = 134/157 (85%) Strand = Plus / Minus Query: 1485 caggctgttcaaaactggatagttgatagggcagtactgccacttgagaatactttgggc 1544 ||||||||| |||||||| ||| ||| ||||||||| |||||||||||||| | ||||| Sbjct: 36932 caggctgttgaaaactggttagctgacagggcagtattgccacttgagaattcattgggt 36873 Query: 1545 ggtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagttggagag 1604 ||||| |||||| |||||| ||| ||||||||||| ||| ||||||| ||||||||| Sbjct: 36872 ggtagcatacataggaactttgaccttttacttcgtcatagattgcacattgttggagag 36813 Query: 1605 gttcgccttgcagttcggcattgcttgttagccaatc 1641 || || ||||| ||||| |||||| |||||||||||| Sbjct: 36812 gtccgtcttgctgttcgtcattgcctgttagccaatc 36776 Score = 121 bits (61), Expect = 1e-23 Identities = 85/93 (91%) Strand = Plus / Minus Query: 1764 aattcttaggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacataga 1823 |||||| |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 36655 aattctcaggctcttgcacaatgtgagcacacattgacagagttcggaattgaacataga 36596 Query: 1824 caagctgttgatgacactgctggtgcagcaaag 1856 ||||||||||||| |||||||||||||||||| Sbjct: 36595 gaagctgttgatgatactgctggtgcagcaaag 36563 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Minus Query: 2029 agactagcattgtgttttcacttgaagaaggacccggacaactcttcaaggcacttgcag 2088 |||||||||| || |||||||||||||||||||| || |||||||| |||||||||| | Sbjct: 36072 agactagcatagtcttttcacttgaagaaggacctgggcaactctttaaggcacttgggg 36013 Query: 2089 tttttgcactgagggaaatcaacctcaccaag 2120 | ||||||||||||||||||||||| |||||| Sbjct: 36012 tgtttgcactgagggaaatcaacctaaccaag 35981 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 388 ccctggagcgtacagtgaggctgcagcaaagaaggcctatccaaattgccagacagtgcc 447 ||||||||||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| Sbjct: 37918 ccctggagcgtacagcgaggcggcagcgaagaaggcgtacccaaattgccagactgtgcc 37859 Query: 448 ctgcgagcactttgatactgc 468 ||| |||||||| |||||||| Sbjct: 37858 ctgtgagcacttcgatactgc 37838 Score = 93.7 bits (47), Expect = 3e-15 Identities = 80/91 (87%) Strand = Plus / Minus Query: 1863 gcagaacaaatgctccaagatactggtgctgttgccagttcattagctgctgaactttat 1922 |||||||||| ||||||||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 36414 gcagaacaaaatctccaagataccggtgcgattgccagttcactggcagctgaactttat 36355 Query: 1923 gaactggatattcttgctgaaaatattcagg 1953 | |||| || ||||||||||||||||||||| Sbjct: 36354 ggactgaatgttcttgctgaaaatattcagg 36324 Score = 85.7 bits (43), Expect = 7e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 2193 tttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcagaac 2252 ||||||||||| || ||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 35674 tttgactacctcttctatatggaccttgaggcatcaatggctgatccaaaaactcagaat 35615 Query: 2253 gctctcagaaatttg 2267 ||||| |||||||| Sbjct: 35614 gctcttggaaatttg 35600 Score = 69.9 bits (35), Expect = 4e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 2269 aggagttcgcaaccttttcaagagtcctagggagctatcctacagacgtgagcgaagctt 2328 ||||||| |||||||||| ||||||||| || |||||||||||||| || | ||||||| Sbjct: 35530 aggagtttgcaacctttttaagagtccttggaagctatcctacagatgtaaatgaagctt 35471 Query: 2329 gaatagcaagtgcttgctgcagatcacatgttagt 2363 ||||||||| | | ||||| |||||||| |||| Sbjct: 35470 aaatagcaagcaccttctgcatatcacatgctagt 35436 Score = 61.9 bits (31), Expect = 1e-05 Identities = 31/31 (100%) Strand = Plus / Minus Query: 353 agcggggaggggctcaaggttgcctaccagg 383 ||||||||||||||||||||||||||||||| Sbjct: 38091 agcggggaggggctcaaggttgcctaccagg 38061 Score = 60.0 bits (30), Expect = 4e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 1965 aatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggttgataaacca 2024 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 36238 aatgttacccgttttatgatgctggctcgagaaccaattatacctcgcaccgataaacca 36179 Query: 2025 ttcaag 2030 |||||| Sbjct: 36178 ttcaag 36173 Score = 52.0 bits (26), Expect = 0.010 Identities = 35/38 (92%) Strand = Plus / Minus Query: 2119 agatcgaaagccgtccacacaagaaaaggccttttcgt 2156 |||| |||||||| |||||||||||||||||| ||||| Sbjct: 35887 agatagaaagccgcccacacaagaaaaggcctcttcgt 35850
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 121 bits (61), Expect = 1e-23 Identities = 85/93 (91%) Strand = Plus / Plus Query: 1764 aattcttaggcccttgcgcaatgtgagcatacactgacagagttgggaattgaacataga 1823 |||||| |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 231 aattctcaggctcttgcacaatgtgagcacacattgacagagttcggaattgaacataga 290 Query: 1824 caagctgttgatgacactgctggtgcagcaaag 1856 ||||||||||||| |||||||||||||||||| Sbjct: 291 gaagctgttgatgatactgctggtgcagcaaag 323 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Plus Query: 2029 agactagcattgtgttttcacttgaagaaggacccggacaactcttcaaggcacttgcag 2088 |||||||||| || |||||||||||||||||||| || |||||||| |||||||||| | Sbjct: 814 agactagcatagtcttttcacttgaagaaggacctgggcaactctttaaggcacttgggg 873 Query: 2089 tttttgcactgagggaaatcaacctcaccaag 2120 | ||||||||||||||||||||||| |||||| Sbjct: 874 tgtttgcactgagggaaatcaacctaaccaag 905 Score = 93.7 bits (47), Expect = 3e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 1863 gcagaacaaatgctccaagatactggtgctgttgccagttcattagctgctgaactttat 1922 |||||||||| ||||||||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 472 gcagaacaaaatctccaagataccggtgcgattgccagttcactggcagctgaactttat 531 Query: 1923 gaactggatattcttgctgaaaatattcagg 1953 | |||| || ||||||||||||||||||||| Sbjct: 532 ggactgaatgttcttgctgaaaatattcagg 562 Score = 85.7 bits (43), Expect = 7e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 2193 tttgactacctgttttatgtggaccttgaggcgtctatggctgatccaaaaactcagaac 2252 ||||||||||| || ||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 1212 tttgactacctcttctatatggaccttgaggcatcaatggctgatccaaaaactcagaat 1271 Query: 2253 gctctcagaaatttg 2267 ||||| |||||||| Sbjct: 1272 gctcttggaaatttg 1286 Score = 77.8 bits (39), Expect = 2e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 1539 ttgggcggtagtatacatcggaactatgatcttttacttcggcatgagctgcacatagtt 1598 ||||| ||||| |||||| |||||| ||| ||||||||||| ||| ||||||| ||| Sbjct: 8 ttgggtggtagcatacataggaactttgaccttttacttcgtcatagattgcacattgtt 67 Query: 1599 ggagaggttcgccttgcagttcggcattgcttgttagccaatc 1641 |||||||| || ||||| ||||| |||||| |||||||||||| Sbjct: 68 ggagaggtccgtcttgctgttcgtcattgcctgttagccaatc 110 Score = 69.9 bits (35), Expect = 4e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 2269 aggagttcgcaaccttttcaagagtcctagggagctatcctacagacgtgagcgaagctt 2328 ||||||| |||||||||| ||||||||| || |||||||||||||| || | ||||||| Sbjct: 1356 aggagtttgcaacctttttaagagtccttggaagctatcctacagatgtaaatgaagctt 1415 Query: 2329 gaatagcaagtgcttgctgcagatcacatgttagt 2363 ||||||||| | | ||||| |||||||| |||| Sbjct: 1416 aaatagcaagcaccttctgcatatcacatgctagt 1450 Score = 60.0 bits (30), Expect = 4e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1965 aatgtcacccgctttatgatgcttgctcgggaacctattatacctcgggttgataaacca 2024 ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 648 aatgttacccgttttatgatgctggctcgagaaccaattatacctcgcaccgataaacca 707 Query: 2025 ttcaag 2030 |||||| Sbjct: 708 ttcaag 713 Score = 52.0 bits (26), Expect = 0.010 Identities = 35/38 (92%) Strand = Plus / Plus Query: 2119 agatcgaaagccgtccacacaagaaaaggccttttcgt 2156 |||| |||||||| |||||||||||||||||| ||||| Sbjct: 999 agatagaaagccgcccacacaagaaaaggcctcttcgt 1036
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 119 bits (60), Expect = 5e-23 Identities = 103/116 (88%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat-tccatccgt 985 ||||||||| |||||||||| ||||||| |||| |||||||||||||||| | |||||| Sbjct: 301 ctacatacgaagcaaaatgaatgaatctgcactttaaagtatgtctatatatatatccgt 360 Query: 986 atgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||| |||||||| ||||| ||||||||||||||| ||| |||||||||| Sbjct: 361 atgtagtctactagtggaatctctagaaagacttatatttaggaacggagggagta 416 Score = 75.8 bits (38), Expect = 7e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 |||||||||||||||||||||||||||||| ||| |||| |||||| ||||||| Sbjct: 416 tactccctccgttcctaaatataagtctttctagagattccactagtagactac 363 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcac 724 ||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 251 tactccctccgtttctaaatataagtcttttaagagatttcac 293 Score = 46.1 bits (23), Expect = 0.62 Identities = 44/51 (86%) Strand = Plus / Plus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||| |||||||||||||| ||| || |||||| |||| ||||||||||| Sbjct: 201 actatatacggagcaaaataagttaacttacactttaaattatgtctatat 251 Score = 46.1 bits (23), Expect = 0.62 Identities = 50/59 (84%) Strand = Plus / Minus Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||| || || ||| || |||| |||||||||||||||| || |||||||||| Sbjct: 309 cgtatgtagactcttggtgaaatctcttaaaagacttatatttagaaacggagggagta 251
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 117 bits (59), Expect = 2e-22 Identities = 102/115 (88%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 928 tacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtat 987 ||||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 93780 tacatacagagcaaaatgagtgaatctacactctaaagtatgtctata-tacatccgtac 93838 Query: 988 gtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||| | ||||| || ||||||||||||||||||| ||| ||||||||||| Sbjct: 93839 gtagtcctctagtgcaatctctaaaaagacttatattatggaacggagggagtag 93893 Score = 105 bits (53), Expect = 8e-19 Identities = 99/113 (87%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 929 acatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatg 988 |||||||||| ||||||| |||||||| | | |||||||||||||||| | ||||||||| Sbjct: 55610 acatacggagtaaaatgaatgaatctatattttaaagtatgtctatatac-atccgtatg 55668 Query: 989 tagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||| ||||| ||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 55669 tagttcattagttgaacctctagaaagacttatatttaggaacggagggagta 55721 Score = 95.6 bits (48), Expect = 8e-16 Identities = 92/104 (88%), Gaps = 2/104 (1%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||| ||||||||||| ||||||| ||| |||||| ||||| | ||||||| Sbjct: 4782 ctacatacggagaaaaatgagtgagcctacactctaaggtatgtatatatac-atccgta 4840 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaa 1030 ||||||| | ||||||||||||| ||||||||||||||||||| Sbjct: 4841 tgtagtccgt-agtggaacctctacaaagacttatatttaagaa 4883 Score = 85.7 bits (43), Expect = 7e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 ||||||||| |||||||||| ||||| |||||| |||| |||||||||| | |||||||| Sbjct: 67835 ctacatacgaagcaaaatgattgaatgtacactctaaaatatgtctata-tacatccgta 67893 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 | | ||| ||||| || ||||| ||||||||||||||| ||| |||||||||| Sbjct: 67894 tatggtccactagtgaaatctctacaaagacttatatttaggaacggagggagta 67948 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 67948 tactccctccgttcctaaatataagtctttgtagagatttcactag 67903 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 93729 tactccctccgttcctaaatataagtcttttaagcgatttcacta 93773 Score = 63.9 bits (32), Expect = 3e-06 Identities = 32/32 (100%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagtcttt 711 |||||||||||||||||||||||||||||||| Sbjct: 55723 attactccctccgttcctaaatataagtcttt 55692 Score = 61.9 bits (31), Expect = 1e-05 Identities = 37/39 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 |||||| ||||||||||||||||||||||||||| |||| Sbjct: 4733 tactccatccgttcctaaatataagtctttttagagatt 4771 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 93892 tactccctccgttccataatataagtctttttagagattgcactag 93847 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 690 ccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||| || |||||||||| Sbjct: 67793 ccgttcctaaatataagtcttttaagcgatttcacta 67829 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttt 712 |||||||||||| |||||||||||||||||| Sbjct: 55558 tactccctccgtacctaaatataagtctttt 55588 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Minus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||| ||| ||||||||||||||||||||| ||| ||| |||||| Sbjct: 4777 tagtagaatctctaaaaagacttatatttaggaacggatggagta 4733 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagta 1041 |||||||||||||||| ||| |||||||||| Sbjct: 93759 aaaagacttatatttaggaacggagggagta 93729
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 117 bits (59), Expect = 2e-22 Identities = 102/115 (88%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||||||||||| |||||||| ||| ||||||||||||||| | |||||||| Sbjct: 14603 ctacatacggagcaaaatgattgaatctatactctaaagtatgtctata-tacatccgta 14545 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||| ||||| || ||||| ||||||||||||||| ||| |||||||||| Sbjct: 14544 tgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagta 14490 Score = 109 bits (55), Expect = 5e-20 Identities = 101/115 (87%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 ||||||| |||||||||||| |||||||| ||| ||||||||||||||| | |||||||| Sbjct: 89193 ctacatatggagcaaaatgattgaatctatactctaaagtatgtctata-tacatccgta 89251 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||| ||||| || ||||| ||||||||||||||| ||| |||||||||| Sbjct: 89252 tgtagtccactagtgaaatctctagaaagacttatatttaggaacggagggagta 89306 Score = 105 bits (53), Expect = 8e-19 Identities = 103/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||||||||| | |||||||| ||| ||||||||| ||||| | |||||||| Sbjct: 81186 ctacatacggagcaaaataaatgaatctatactttaaagtatgcctata-tacatccgta 81244 Query: 987 tgtagt-cttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||| | ||||||| ||||||| |||||||||||||||| ||| ||||| ||||| Sbjct: 81245 tgtagtccatttagtgaaacctcttaaaagacttatatttaggaacggaggaagtag 81301 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcactag 14535 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 89306 tactccctccgttcctaaatataagtctttctagagatttcactag 89261 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 89143 tactccctccgttcctaaatataagtcttttaagcgatttcacta 89187 Score = 71.9 bits (36), Expect = 1e-08 Identities = 101/120 (84%), Gaps = 2/120 (1%) Strand = Plus / Minus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 ||||||||||||||||||||||||||||| |||| ||| |||| ||| | | ||||| Sbjct: 66721 agactacatacggagcaaaatgagtgaatttacatcccaaaatatgactaca-tacatcc 66663 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtaga 1043 ||||||||| || ||||| | |||||||| | |||||||||| ||| |||||||||||| Sbjct: 66662 gtatgtagt-ttatagtgagatctctaaaaggtcttatatttaggaacggagggagtaga 66604 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 676 gtttattactccctccgttcctaaatataagtctttttagtgatttc 722 ||||| ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 83459 gtttagtactctctccgttcctaaatataagtctttttagagatttc 83505 Score = 67.9 bits (34), Expect = 2e-07 Identities = 34/34 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||||||||||||||||||||||||| Sbjct: 81136 tactccctccgttcctaaatataagtctttttag 81169 Score = 65.9 bits (33), Expect = 7e-07 Identities = 97/117 (82%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 |||| ||||||||| |||||||||||||||||||| || | |||||||| | | |||| Sbjct: 83580 gactgcatacggagtaaaatgagtgaatctacactctagaatatgtctaca-tacatcta 83522 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||| || || |||| | || ||||||||||||||||||||| ||| |||| ||||| Sbjct: 83521 tatataatcccttagcgaaatctctaaaaagacttatatttaggaacggagagagta 83465 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||| |||||||||||||||||||||||||| || ||||||||| Sbjct: 14653 tacttcctccgttcctaaatataagtcttttaagcaatttcacta 14609 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||| | |||||| ||| |||||| Sbjct: 66606 tactccctccgttcctaaatataagaccttttagagatctcacta 66650 Score = 58.0 bits (29), Expect = 2e-04 Identities = 53/61 (86%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||| | |||||| || |||||||||||||||||||| ||| ||||||||| Sbjct: 81196 tccgtatgtagccctttagtaaaatttctaaaaagacttatatttaggaacggagggagt 81137 Query: 1041 a 1041 | Sbjct: 81136 a 81136 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||| |||||||||||||||||||||||||| || | |||||||| Sbjct: 81300 tacttcctccgttcctaaatataagtcttttaagaggtttcacta 81256 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 66767 tactccctccgttcctaaatataag 66743 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagta 1041 |||||||||||||||| ||| |||||||||| Sbjct: 89173 aaaagacttatatttaggaacggagggagta 89143 Score = 42.1 bits (21), Expect = 9.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||| | ||||||| || || |||||||||||||||| ||| ||||| ||| Sbjct: 14593 tccgtatgtagacctttagtgaaattgcttaaaagacttatatttaggaacggaggaagt 14652 Query: 1041 a 1041 | Sbjct: 14653 a 14653
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 117 bits (59), Expect = 2e-22 Identities = 102/115 (88%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 928 tacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtat 987 ||||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 2129 tacatacagagcaaaatgagtgaatctacactctaaagtatgtctata-tacatccgtac 2071 Query: 988 gtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||| | ||||| || ||||||||||||||||||| ||| ||||||||||| Sbjct: 2070 gtagtcctctagtgcaatctctaaaaagacttatattatggaacggagggagtag 2016 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 2180 tactccctccgttcctaaatataagtcttttaagcgatttcacta 2136 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 2017 tactccctccgttccataatataagtctttttagagattgcactag 2062 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggagggagta 1041 |||||||||||||||| ||| |||||||||| Sbjct: 2150 aaaagacttatatttaggaacggagggagta 2180
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 115 bits (58), Expect = 8e-22 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| Sbjct: 194 agactacatacggagcaaaatgagtgaatctacactctaaagtatgtctata-tacatcc 252 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||| ||||| | ||||| || ||| |||||||||||||||| ||| |||||||||| Sbjct: 253 gtacatagtc-tgtagtgaaatttcttaaaagacttatatttaggaacggagggagta 309 Score = 109 bits (55), Expect = 5e-20 Identities = 108/123 (87%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||||||||||||||||||||||||||||||||| ||| |||| ||||||||| | ||| Sbjct: 1637 ggagactacatacggagcaaaatgagtgaatctatactctaaaatatgtctat-gtacat 1695 Query: 982 ccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| || |||| || |||||||| | |||||||||| ||| |||||||||| Sbjct: 1696 ccgtatgtagt-ttatagtacaatctctaaaaggtcttatatttaggaacggagggagta 1754 Query: 1042 gat 1044 ||| Sbjct: 1755 gat 1757 Score = 99.6 bits (50), Expect = 5e-17 Identities = 102/117 (87%), Gaps = 3/117 (2%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 ||||||||||||||||| |||| |||||| || ||||||| |||||||| | ||||||| Sbjct: 143227 ctacatacggagcaaaacgagtaaatctatgctctaaagtacgtctatatac-atccgta 143285 Query: 987 tgtagtcttttagtggaacctct--aaaaagacttatatttaagaagggagggagta 1041 ||||||||| ||||| ||||||| ||||||||||||||||| ||| |||| ||||| Sbjct: 143286 tgtagtcttgtagtgaaacctctaaaaaaagacttatatttaggaacggagcgagta 143342 Score = 77.8 bits (39), Expect = 2e-10 Identities = 101/119 (84%), Gaps = 2/119 (1%) Strand = Plus / Plus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||||||||||| ||||||||||||||||||| ||| |||| |||||| || | |||| Sbjct: 217234 agactacatacgaagcaaaatgagtgaatctatactctaaaatatgtcgat-gtatatcc 217292 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 ||||||||| | ||||| || |||||||| | ||||||||||| || ||||||||||| Sbjct: 217293 gtatgtagt-tcatagtgcaatctctaaaatgtcttatatttaaaaacggagggagtag 217350 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||||||| ||||||||| | |||||| |||||||||||||||||| Sbjct: 1592 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactac 1645 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 194500 tacttcctccgttcctaaatataagtcttttaagcgatttcactag 194455 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaagaaatttcacta 265 Score = 65.9 bits (33), Expect = 7e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttta 714 ||||||||||||||||||||||||||||||||| Sbjct: 136684 tactccctccgttcctaaatataagtcttttta 136716 Score = 61.9 bits (31), Expect = 1e-05 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||||||||||||||| |||||||||| ||| || ||| |||||||| ||||| | ||| Sbjct: 142808 ggagactacatacggaacaaaatgagttaatttatactctaaagtatatctat-gtacat 142750 Query: 982 ccgtatgtagt 992 ||||||||||| Sbjct: 142749 ccgtatgtagt 142739 Score = 58.0 bits (29), Expect = 2e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttta 714 |||||||| |||||||||||||||||||||||| Sbjct: 96971 tactcccttcgttcctaaatataagtcttttta 97003 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatataagtctttt 712 |||||||||||||||||||||| ||||||||| Sbjct: 147 ttactccctccgttcctaaatacaagtctttt 178 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttttt 713 ||||| |||||||||||||||||||||||||| Sbjct: 143342 tactcgctccgttcctaaatataagtcttttt 143311 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||||||||||||||||||| | |||||| |||| Sbjct: 1754 tactccctccgttcctaaatataagaccttttagagatt 1716 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1009 taaaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||||| ||| ||||||||||| Sbjct: 136716 taaaaagacttatatttaggaacggagggagtag 136683 Score = 52.0 bits (26), Expect = 0.010 Identities = 44/50 (88%) Strand = Plus / Minus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 ||||||||| |||||||||| ||||| | || | |||||||||||||||| Sbjct: 194450 ctacatacgaagcaaaatgattgaatattcattttaaagtatgtctatat 194401 Score = 50.1 bits (25), Expect = 0.040 Identities = 49/57 (85%) Strand = Plus / Minus Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||||||||| | || |||||||| | ||||||||| |||| |||||||||| Sbjct: 217225 tatgtagtcttttaataaaatctctaaaaggtcttatattttagaacggagggagta 217169 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttt 712 |||| |||||||| ||||||||||||||||| Sbjct: 190752 tacttcctccgtttctaaatataagtctttt 190782 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1009 taaaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||||| ||| | ||||||||| Sbjct: 97003 taaaaagacttatatttaggaacgaagggagtag 96970 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggagggagtaga 1043 |||||||||||||||| ||| ||||| |||||| Sbjct: 194470 aaaagacttatatttaggaacggaggaagtaga 194502 Score = 42.1 bits (21), Expect = 9.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||| |||||||||| | |||||| |||| ||||| Sbjct: 217349 tactccctccgtttttaaatataagacattttagagattgcacta 217305
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 115 bits (58), Expect = 8e-22 Identities = 101/114 (88%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 928 tacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtat 987 |||||||| || |||||||||||||| ||||| |||||||||||||||| | ||| |||| Sbjct: 47331 tacatacgaagtaaaatgagtgaatcaacactttaaagtatgtctatatac-atctgtat 47389 Query: 988 gtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| | ||||| |||||||||||||||||||||||| ||| |||||||||| Sbjct: 47390 gtagttctctagtgaaacctctaaaaagacttatatttacgaacggagggagta 47443 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 47280 tactccctccgttcctaaatataagtcttttaagagatttcacta 47324 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||| ||||||||||||||||||| | ||||||||| Sbjct: 47443 tactccctccgttcgtaaatataagtctttttagaggtttcactag 47398 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctaca 957 |||| ||||||||||||||||||||||||||| Sbjct: 61122 actagatacggagcaaaatgagtgaatctaca 61091 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 996 ttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||| || |||| |||||||||||||||| ||| ||||||||||| Sbjct: 47325 ttagtgaaatctcttaaaagacttatatttaggaacggagggagtag 47279 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 61170 tactccctccgttcctaaatataag 61146 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataa 705 |||||||||||||||||||||||| Sbjct: 60938 tactccctccgttcctaaatataa 60961
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 113 bits (57), Expect = 3e-21 Identities = 104/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||||| Sbjct: 1330 gactacatacggagcaaaatgagtgaatctacactctaaaatacgtctatatt-catccg 1272 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||| || | || ||||||||||||||||||||| ||| |||||||||| Sbjct: 1271 tatgtagtc-catattcaaatctctaaaaagacttatatttaggaacggagggagta 1216 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgattt 721 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttagagattt 1255 Score = 61.9 bits (31), Expect = 1e-05 Identities = 37/39 (94%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||| |||||||||||||||||||||||| |||| Sbjct: 1377 tactccctctgttcctaaatataagtctttttagagatt 1339 Score = 48.1 bits (24), Expect = 0.16 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1006 ctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||||||||||||| ||| ||||||||| Sbjct: 1342 ctctaaaaagacttatatttaggaacagagggagta 1377
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 113 bits (57), Expect = 3e-21 Identities = 104/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 |||||||||| ||||||||||||| ||||||||| ||||||||||||||| | |||||| Sbjct: 7527 gactacatacaaagcaaaatgagtgcatctacactctaaagtatgtctata-tacatccg 7469 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| | |||||||| |||||||||||| |||||||| ||| |||||||||| Sbjct: 7468 tatgtagt-tcgtagtggaatctctaaaaagacctatatttaggaatggagggagta 7413 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||| |||||||||||||||||||||||||||| |||| ||||| Sbjct: 7574 tactcactccgttcctaaatataagtctttttagagattacacta 7530 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||| |||||||||||| |||||||||| |||| ||||| Sbjct: 7413 tactccctccattcctaaatataggtctttttagagattccacta 7457 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Plus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| || ||||||||||||||||||||| ||| |||| ||||| Sbjct: 7530 tagtgtaatctctaaaaagacttatatttaggaacggagtgagta 7574
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 109 bits (55), Expect = 5e-20 Identities = 101/115 (87%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||||||||||| |||| ||| ||| |||| ||||||||||| | ||||||| Sbjct: 2242 ctacatacggagcaaaatgaatgaacctatactttaaaatatgtctatatac-atccgta 2300 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||| ||||| | ||||||| ||||||||||||||| ||| |||||||||| Sbjct: 2301 tgtagtccattagttggacctctagaaagacttatatttaggaacggagggagta 2355 Score = 60.0 bits (30), Expect = 4e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 |||||||||||||||||||||||||||||| Sbjct: 2355 tactccctccgttcctaaatataagtcttt 2326 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttt 712 |||||||||||| ||||||||||||| |||| Sbjct: 2192 tactccctccgtacctaaatataagtatttt 2222
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 109 bits (55), Expect = 5e-20 Identities = 101/115 (87%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 ||||||||||| ||||||||||||||||||||| |||| |||||||||| | |||||||| Sbjct: 8478 ctacatacggaccaaaatgagtgaatctacactctaaaatatgtctata-tacatccgta 8420 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| ||| || || |||| ||| ||||||||||| ||| |||||||||| Sbjct: 8419 tgtagtctattaatgaaatctctttaaaaacttatatttaggaacggagggagta 8365 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||| |||||||| |||| ||||| Sbjct: 346 tactccctccgttcctaaatataagactttttagagattgcacta 302 Score = 60.0 bits (30), Expect = 4e-05 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 941 aaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgtagtcttttagt 1000 |||| |||||||||||||| |||| |||||||||| | ||| ||||||||||| ||| | Sbjct: 8331 aaattagtgaatctacactctaaaatatgtctata-tacatttgtatgtagtctattaat 8273 Query: 1001 ggaacctctaaaaagacttatattta 1026 | || |||| ||||||||||||||| Sbjct: 8272 gaaatctctttaaagacttatattta 8247 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagt 707 |||||||||||||||||||||||||| Sbjct: 8365 tactccctccgttcctaaatataagt 8390 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 |||||| ||||||||||||||||||||||| Sbjct: 8528 tactccatccgttcctaaatataagtcttt 8499
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 105 bits (53), Expect = 8e-19 Identities = 103/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||||| Sbjct: 1336 gactacatacggagcaaaatgagtgaatctacactctaaaatacgtctatatt-catccg 1278 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| || | || ||||||||||||||||||||| ||| |||||||||| Sbjct: 1277 tatgtagt-gcatattcaaatctctaaaaagacttatatttaggaacggagggagta 1222 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgattt 721 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttagagattt 1261 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 686 ccctccgttcctaaatataagtctttttagtgatt 720 ||||| |||||||||||||||||||||||| |||| Sbjct: 1379 ccctctgttcctaaatataagtctttttagagatt 1345 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1006 ctctaaaaagacttatattta 1026 ||||||||||||||||||||| Sbjct: 1348 ctctaaaaagacttatattta 1368
>gb|DQ995510.1| Hordeum vulgare clone 509d02_c-83 genomic sequence Length = 10179 Score = 103 bits (52), Expect = 3e-18 Identities = 104/120 (86%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||| |||||||||||| ||||||| |||||||||||| |||| |||||||||| | ||| Sbjct: 8047 ggagtctacatacggagtaaaatgaatgaatctacactctaaaatatgtctata-tacat 8105 Query: 982 ccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| |||||| |||||| ||||| | ||||||||||||||| ||| |||||||||| Sbjct: 8106 ccgtacgtagtccattagtgaaacctttttaaagacttatatttaggaacggagggagta 8165 Score = 87.7 bits (44), Expect = 2e-13 Identities = 103/120 (85%), Gaps = 2/120 (1%) Strand = Plus / Minus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||||||||||||||||||| ||||||||||| ||| |||| |||||||||| | ||| | Sbjct: 8325 agactacatacggagcaaaacgagtgaatctatactctaaaatatgtctata-tacattc 8267 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtaga 1043 |||| ||||| | || || || |||||||| | |||||||||| ||| |||||||||||| Sbjct: 8266 gtatatagtc-tataatgtaatctctaaaaggtcttatatttaggaacggagggagtaga 8208 Score = 63.9 bits (32), Expect = 3e-06 Identities = 32/32 (100%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagtcttt 711 |||||||||||||||||||||||||||||||| Sbjct: 8167 attactccctccgttcctaaatataagtcttt 8136 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||||||||||||||||||| | |||||| |||| Sbjct: 8210 tactccctccgttcctaaatataagaccttttagagatt 8248 Score = 52.0 bits (26), Expect = 0.010 Identities = 47/54 (87%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||||| |||||||||||||||| || |||||| |||||| |||| Sbjct: 8002 tactccctccgtttttaaatataagtcttttaagatatttcattaggagtctac 8055 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagtag 1042 ||||||||||||||||| || ||||||||||| Sbjct: 8032 aaaagacttatatttaaaaacggagggagtag 8001
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 103 bits (52), Expect = 3e-18 Identities = 92/104 (88%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 923 gagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatc 982 |||||||||||| |||||||||||||||| || | | ||||||||||||| || | ||| Sbjct: 91798 gagactacatacaaagcaaaatgagtgaatatatattttaaagtatgtctaaatac-atc 91740 Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatattta 1026 ||||||||||| | ||||| |||||||||||||||||||||||| Sbjct: 91739 cgtatgtagtcctatagtgaaacctctaaaaagacttatattta 91696 Score = 95.6 bits (48), Expect = 8e-16 Identities = 103/120 (85%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||| ||||||||| |||||||||||| |||||||||| ||||||||||||||| | ||| Sbjct: 85353 ggagtctacatacgaagcaaaatgagtaaatctacactctaaagtatgtctata-tacat 85295 Query: 982 ccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||||| ||| || ||||||| ||||||||||||||| ||| | |||||||| Sbjct: 85294 ccgtatgtagcgcattaatgaaacctctttaaagacttatatttaggaatgaagggagta 85235 Score = 75.8 bits (38), Expect = 7e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||||||||||||||||||||||| || ||||||||| |||||||| Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcactaagagactac 91791 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| |||||| || ||| |||||||||||||||| ||| |||||||||| Sbjct: 91787 gtatgtagtctcttagtgaaatttcttaaaagacttatatttaggaacggagggagta 91844 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 690 ccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||||||||||||||||| | |||||||| Sbjct: 91689 ccgttcctaaatataagtctttttagaggtttcacta 91725 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttt 712 ||||||||| ||||||||||||||||||||| Sbjct: 85397 tactccctctgttcctaaatataagtctttt 85367 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataagtcttt 711 |||||||||| | ||||||||||||||||||| Sbjct: 85233 attactcccttcattcctaaatataagtcttt 85264
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 103 bits (52), Expect = 3e-18 Identities = 104/120 (86%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 930 catacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgt 989 ||||||||||||||||| |||||||| ||| ||||||||||||||| | ||||||| ||| Sbjct: 5343 catacggagcaaaatgaatgaatctatactttaaagtatgtctata-tgcatccgtttgt 5285 Query: 990 agtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtagatgcaat 1049 |||| ||||| ||| ||||| || ||||||||||| ||| ||||||||||||| |||| Sbjct: 5284 agtccattagttgaatctctagaagaacttatatttaggaacggagggagtagattcaat 5225 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 5156 tactccctccgttcctaaatataagtcttttaagcgatttcacta 5200 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagtagatg 1045 |||||||||||||||| ||| |||||||||||||| Sbjct: 5186 aaaagacttatatttaggaacggagggagtagatg 5152 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagt 707 |||||||||||||||||||||||||| Sbjct: 5233 tactccctccgttcctaaatataagt 5258 Score = 48.1 bits (24), Expect = 0.16 Identities = 39/44 (88%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcact 725 |||||||||||| || ||||||||||||||| || |||||||| Sbjct: 5396 tactccctccgtaccaaaatataagtcttttaagatatttcact 5353 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctac 956 ||||||| |||||||||||| ||||||||| Sbjct: 5206 ctacatagggagcaaaatgattgaatctac 5235 Score = 44.1 bits (22), Expect = 2.5 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 961 taaagtatgtctatattccatccgtatgtagtcttttagtggaacctctaaaaagactta 1020 |||||||| ||||||| | |||||||||||||| |||| || ||||| ||||||||| Sbjct: 5402 taaagtatatctatatac-atccgtatgtagtccactagtaaaatctctagaaagactta 5460 Query: 1021 tattta 1026 |||||| Sbjct: 5461 tattta 5466
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 99.6 bits (50), Expect = 5e-17 Identities = 106/122 (86%), Gaps = 2/122 (1%) Strand = Plus / Minus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||| ||||||||| ||||||||||||||||||||||| |||| |||||||||| | ||| Sbjct: 50586 ggagtctacatacgaagcaaaatgagtgaatctacactttaaaatatgtctata-tacat 50528 Query: 982 ccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 || ||||||||| || || ||||| | ||||||||||||||||||| |||||||||| Sbjct: 50527 ccatatgtagtccactaatgaaacct-tttaaagacttatatttaagaacggagggagta 50469 Query: 1042 ga 1043 || Sbjct: 50468 ga 50467 Score = 61.9 bits (31), Expect = 1e-05 Identities = 46/51 (90%) Strand = Plus / Minus Query: 685 tccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 |||||||||||||| ||||||||||||| || ||||||||||||| |||| Sbjct: 50628 tccctccgttcctagatataagtcttttaagatatttcactaggagtctac 50578 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttt 711 |||||||||||||| ||||||||||||||| Sbjct: 50469 tactccctccgttcttaaatataagtcttt 50498
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 97.6 bits (49), Expect = 2e-16 Identities = 105/121 (86%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||||||||||| ||||||||||||||||||| ||| |||| ||||||||| | ||||| Sbjct: 5481 agactacatacgaagcaaaatgagtgaatctatactctaaaatatgtctat-gtacatcc 5423 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtaga 1043 ||||||||| || |||| || |||||||| | |||||||||| ||| |||||||||||| Sbjct: 5422 gtatgtagt-ttatagtataatctctaaaaggtcttatatttaggaacggagggagtaga 5364 Query: 1044 t 1044 | Sbjct: 5363 t 5363 Score = 75.8 bits (38), Expect = 7e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcactaagtgactac 21967 Score = 61.9 bits (31), Expect = 1e-05 Identities = 98/119 (82%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||| || |||||| ||||| | || | |||||||||| |||| | ||||| Sbjct: 21972 gactacatacgtagtaaaatgcatgaatgtgcattccaaagtatgtccatatac-atccg 21914 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtaga 1043 |||||| |||| ||||| || |||| ||||||||||||||| ||| ||||||||||| Sbjct: 21913 tatgtaatcttctagtgaaatctctttaaagacttatatttaggaacagagggagtaga 21855 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| |||||| || ||||||||||||||||||||| || |||||||||| Sbjct: 21962 cgtatgtagtcacttagtgaaatctctaaaaagacttatatttaggatcggagggagta 22020 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 21857 tactccctctgttcctaaatataagtctttaaagagatttcactag 21902 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||||||||||||||||||| | |||||| |||| Sbjct: 5366 tactccctccgttcctaaatataagaccttttagagatt 5404
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 93.7 bits (47), Expect = 3e-15 Identities = 104/123 (84%), Gaps = 5/123 (4%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat-----tcc 979 ||||||||||| |||||| |||||||||||| ||| ||||| |||||||||| | | Sbjct: 17129 gactacatacgaagcaaagtgagtgaatctatactttaaagcatgtctatatacatgtac 17188 Query: 980 atccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggag 1039 ||| |||||||||| |||||||||||||||||||||||| ||||| ||| ||| |||| Sbjct: 17189 atctgtatgtagtcccctagtggaacctctaaaaagacttacatttaggaatggatggag 17248 Query: 1040 tag 1042 ||| Sbjct: 17249 tag 17251 Score = 52.0 bits (26), Expect = 0.010 Identities = 47/54 (87%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 |||||| ||| ||||||||| ||||||||||||| | || ||||||| |||||| Sbjct: 17250 tactccatccattcctaaatgtaagtctttttagaggttccactaggggactac 17197 Score = 46.1 bits (23), Expect = 0.62 Identities = 50/59 (84%) Strand = Plus / Minus Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| |||||||| ||||||||||| || ||||| ||| |||||||||| Sbjct: 17139 cgtatgtagtcccctagtggaatctctaaaaagatatacatttaggaatggagggagta 17081
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 93.7 bits (47), Expect = 3e-15 Identities = 103/119 (86%), Gaps = 2/119 (1%) Strand = Plus / Plus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||||||||||||||||||||||| ||||||| ||| |||| ||||||||| | ||||| Sbjct: 5687 agactacatacggagcaaaatgagcgaatctatactctaaaatatgtctat-gtacatcc 5745 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 ||||||||| || |||| || |||||||| | |||||||||| ||| ||||||||||| Sbjct: 5746 gtatgtagt-ttatagtacaatctctaaaaggtcttatatttaggaacggagggagtag 5803 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||||||||| ||||||||| | |||||| |||||||||| ||||||| Sbjct: 5638 attactccctccgttccaaaatataagaccttttaggtatttcactagaagactac 5693 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||||||||||||||||||| | |||||| |||| Sbjct: 5802 tactccctccgttcctaaatataagaccttttagagatt 5764 Score = 42.1 bits (21), Expect = 9.8 Identities = 51/61 (83%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||||||| ||||| || |||||| | ||||||||| ||| ||||||||| Sbjct: 5700 tccgtatgtagtcttctagtgaaatacctaaaaggtcttatattttggaacggagggagt 5641 Query: 1041 a 1041 | Sbjct: 5640 a 5640
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 93.7 bits (47), Expect = 3e-15 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||| Sbjct: 439 ctacatacggagcaaaatgagttaatctacattgtaaagtatgtctata-tgcatccgta 497 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||| || | ||||||| |||| |||||||||| ||| |||||||||| Sbjct: 498 tgtagttcactaaagaaacctctttaaagtcttatatttaggaacggagggagta 552 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcactag 434 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 ||||||||||||||||||||||||| |||| Sbjct: 552 tactccctccgttcctaaatataagacttt 523 Score = 50.1 bits (25), Expect = 0.040 Identities = 52/61 (85%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||| ||| ||||| || ||| |||||||||||||||| || ||||||||| Sbjct: 449 tccgtatgtagacttctagtgaaatatcttaaaagacttatatttagaaacggagggagt 390 Query: 1041 a 1041 | Sbjct: 389 a 389
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 93.7 bits (47), Expect = 3e-15 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||| Sbjct: 138 ctacatacggagcaaaatgagttaatctacattgtaaagtatgtctata-tgcatccgta 196 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||| || | ||||||| |||| |||||||||| ||| |||||||||| Sbjct: 197 tgtagttcactaaagaaacctctttaaagtcttatatttaggaacggagggagta 251 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttt 712 ||||||||||||| ||||||||||||||||| Sbjct: 88 tactccctccgtttctaaatataagtctttt 118 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 ||||||||||||||||||||||||| |||| Sbjct: 251 tactccctccgttcctaaatataagacttt 222 Score = 42.1 bits (21), Expect = 9.8 Identities = 51/61 (83%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||| ||| || || || ||| |||||||||||||||| || ||||||||| Sbjct: 148 tccgtatgtagacttctactgaaatatcttaaaagacttatatttagaaacggagggagt 89 Query: 1041 a 1041 | Sbjct: 88 a 88
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 91.7 bits (46), Expect = 1e-14 Identities = 92/106 (86%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 937 agcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgtagtcttt 996 |||||||||||||||| |||||| ||||||||||||| | | ||||||||||||||| | Sbjct: 1763 agcaaaatgagtgaatatacactctaaagtatgtctaca-tacatccgtatgtagtccta 1705 Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||| ||| ||||| ||||||||||||| ||| ||||||||||| Sbjct: 1704 tagtagaatctctagaaagacttatattatggaacggagggagtag 1659 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1823 tactccctccgttcctaaatataagtcttttaagatatttcactag 1778 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||| ||| ||||||||||| Sbjct: 1793 aaaagacttatatttaggaacggagggagtag 1824 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||||||||| ||||||||||||| ||| |||| Sbjct: 1660 tactccctccgttccataatataagtctttctagagatt 1698
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 91.7 bits (46), Expect = 1e-14 Identities = 100/118 (84%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||| |||| || |||||||||| || ||| ||| |||| ||||||||| | |||||| Sbjct: 8837 gactatatacagaacaaaatgagtaaacctatactttaaaatatgtctatgatacatccg 8778 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||||| | |||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 8777 tatgtagtttaatagtggaatctctaaaaagacttatatttaggaactgagggagtag 8720 Score = 67.9 bits (34), Expect = 2e-07 Identities = 98/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgt 985 |||| ||||||| |||||||| |||||||||||| |||| |||||||||||| ||||| Sbjct: 15167 actatatacggaacaaaatgaatgaatctacactctaaaatatgtctatatt-tatccgg 15109 Query: 986 atgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtaga 1043 ||||||| ||| | || || ||||||||| |||||||| | | |||||||||||| Sbjct: 15108 atgtagtttttctataaaatctttaaaaagacgtatatttagggacggagggagtaga 15051 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 8721 tactccctcagttcctaaatataagtctttttagagattccacta 8765 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Minus Query: 686 ccctccgttcctaaatataagtctttt 712 ||||||||||||||||||||||||||| Sbjct: 8882 ccctccgttcctaaatataagtctttt 8856 Score = 50.1 bits (25), Expect = 0.040 Identities = 31/33 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttta 714 |||||||||||| |||||||||| ||||||||| Sbjct: 15053 tactccctccgtccctaaatatacgtcttttta 15085
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 89.7 bits (45), Expect = 5e-14 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||| |||||||||||||||| || || |||| |||||||||| | |||||| Sbjct: 71739 gactacatacgaagcaaaatgagtgaattcacgctttaaaatatgtctata-tacatccg 71797 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| ||||| || ||||| ||||||||||||||| ||| |||||||||| Sbjct: 71798 tatgtagttcaatagtgaaatctctagaaagacttatatttaggaacggagggagta 71854 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 71855 ttactccctccgttcctaaatataagtctttctagagatttcacta 71810 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 90894 tactccctccgttcctaaatataagtctttgtagagatttcactag 90849 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 73866 tactccctccgttcctaaatataagtcttttaagcgatttcacta 73910 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||| ||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 73916 ctacattcggagcaaaatgattgaatctatactctaaagtatgtctatat 73965 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 979 catccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggaggga 1038 ||||||||||||||| ||||| || ||||| ||||||||||||||| ||| ||||||| Sbjct: 90832 catccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggaggga 90891 Query: 1039 gta 1041 ||| Sbjct: 90892 gta 90894 Score = 60.0 bits (30), Expect = 4e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 686 ccctccgttcctaaatataagtctttttag 715 |||||||||||||||||||||||||||||| Sbjct: 71695 ccctccgttcctaaatataagtctttttag 71724 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||| ||| ||||||||||| Sbjct: 73896 aaaagacttatatttaggaacggagggagtag 73865 Score = 46.1 bits (23), Expect = 0.62 Identities = 47/55 (85%) Strand = Plus / Minus Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggaggg 1037 ||||||||||| | || || || |||||||||||||||||||| ||| |||||| Sbjct: 71749 cgtatgtagtcctctattgaaatgtctaaaaagacttatatttaggaacggaggg 71695
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 89.7 bits (45), Expect = 5e-14 Identities = 97/111 (87%), Gaps = 5/111 (4%) Strand = Plus / Plus Query: 931 atacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgta 990 ||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||| Sbjct: 3555 atacggagcaaaatgagtgaacctacact---aagtatgtctata-tacatccgtatgta 3610 Query: 991 gtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||| |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 3611 gtc-catagtggaatgtcgaaaaagacttatatttaggaacggagggagta 3660 Score = 63.9 bits (32), Expect = 3e-06 Identities = 32/32 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttttt 713 |||||||||||||||||||||||||||||||| Sbjct: 3660 tactccctccgttcctaaatataagtcttttt 3629
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 87.7 bits (44), Expect = 2e-13 Identities = 50/52 (96%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 70069 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtctatat 70018 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 69953 tactccctccgttcctaaatatttgtctttttagagatttca 69994 Score = 52.0 bits (26), Expect = 0.010 Identities = 41/46 (89%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||| ||||||||||| |||||| ||| ||||||| Sbjct: 70121 ttattactccctccattcctaaatatttgtctttctagagatttca 70076
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 87.7 bits (44), Expect = 2e-13 Identities = 100/116 (86%), Gaps = 2/116 (1%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgt 985 ||||||| | || |||||||| ||||| |||||| |||||||||||||||| |||||| Sbjct: 1558 actacatgcagaacaaaatgaatgaatgtacactctaaagtatgtctatataa-atccgt 1500 Query: 986 atgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||| || || || ||||| |||||||||||||||||| ||| |||||||||| Sbjct: 1499 atgtagt-ttctaatgaaacctttaaaaagacttatatttaggaatggagggagta 1445 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatataagtcttttta 714 ||||||||||| |||||||||||||||||||||| Sbjct: 1444 ttactccctccattcctaaatataagtcttttta 1477 Score = 52.0 bits (26), Expect = 0.010 Identities = 41/46 (89%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||| ||||||||| |||||| || || |||||||| Sbjct: 1607 tactccctccgttcttaaatataaatcttttaagagacttcactag 1562 Score = 48.1 bits (24), Expect = 0.16 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1006 ctctaaaaagacttatatttaagaagggagggagta 1041 |||| |||||| ||||||||||||| |||||||||| Sbjct: 1572 ctcttaaaagatttatatttaagaacggagggagta 1607
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 87.7 bits (44), Expect = 2e-13 Identities = 50/52 (96%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 2356 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtctatat 2305 Score = 60.0 bits (30), Expect = 4e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 2240 tactccctccgttcctaaatatttgtctttttagagatttca 2281
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 85.7 bits (43), Expect = 7e-13 Identities = 101/117 (86%), Gaps = 5/117 (4%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||| ||||||||||||||||||||| ||||||| ||||||||||||| | |||||| Sbjct: 3609 gactatatacggagcaaaatgagtgaacctacact---aagtatgtctata-tacatccg 3664 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||| |||||||| || |||||||||| |||||| ||| |||||||||| Sbjct: 3665 tatgtagtc-catagtggaatgtcgaaaaagacttgtatttaggaacggagggagta 3720 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttttt 713 ||||||||||||||||||||| |||||||||| Sbjct: 3720 tactccctccgttcctaaatacaagtcttttt 3689
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 83.8 bits (42), Expect = 3e-12 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 961 taaagtatgtctatattccatccgtatgtagtcttttagtggaacctctaaaaagactta 1020 |||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 52395 taaagtatgtctatatac-atccgtatgtagtcccctagtgaaacatctaaaaagactta 52453 Query: 1021 tatttaagaagggagggagtag 1042 |||||| ||| ||||||||||| Sbjct: 52454 tatttaggaacggagggagtag 52475 Score = 77.8 bits (39), Expect = 2e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 979 catccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggaggga 1038 ||||||||||||| ||||| || |||||||||||||||||||||||| ||| ||||||| Sbjct: 57406 catccgtatgtagatttttaatgaaacctctaaaaagacttatatttaggaacggaggga 57347 Query: 1039 gta 1041 ||| Sbjct: 57346 gta 57344 Score = 75.8 bits (38), Expect = 7e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 |||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 52474 tactccctccgttcctaaatataagtctttttagatgtttcactaggggactac 52421 Score = 67.9 bits (34), Expect = 2e-07 Identities = 34/34 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||||||||||||||||||||||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttttag 57377
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 81.8 bits (41), Expect = 1e-11 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||| ||||||||||||||||||||| |||| |||||||||| | |||||| Sbjct: 172902 gactacatacggaacaaaatgagtgaatctacactctaaaatatgtctata-tacatccg 172960 Query: 985 tatgt 989 ||||| Sbjct: 172961 tatgt 172965 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtct 972 ||||||||||||||||||| |||||||||||||| |||| ||||||| Sbjct: 154891 actacatacggagcaaaataagtgaatctacactctaaactatgtct 154845 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 152088 tactccctccgttcctaaatataagtctttggagagatttcacta 152132 Score = 58.0 bits (29), Expect = 2e-04 Identities = 29/29 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctt 710 ||||||||||||||||||||||||||||| Sbjct: 152248 tactccctccgttcctaaatataagtctt 152220 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Plus Query: 924 agactacatacggagcaaaatgagtgaatctacac 958 |||| |||||||||| ||||||||||||||||||| Sbjct: 152134 agaccacatacggagaaaaatgagtgaatctacac 152168 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||||| |||||||||| |||||||| Sbjct: 154773 tactccctccgttcataaatataagcctttttag 154806 Score = 52.0 bits (26), Expect = 0.010 Identities = 38/42 (90%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 173018 tactccctccgttcctaaatatttgtctttgtagagatttca 172977 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttt 713 |||||||||| |||||||||||| |||||||| Sbjct: 34500 tactccctccattcctaaatataggtcttttt 34531 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1012 aaagacttatatttaagaagggagggagtag 1042 ||||||||||||||| ||| ||||||||||| Sbjct: 152117 aaagacttatatttaggaacggagggagtag 152087 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1010 aaaaagacttatatttaagaagggagggagtaga 1043 |||||||| |||||||| ||| |||||||||||| Sbjct: 34531 aaaaagacctatatttaggaatggagggagtaga 34498 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 935 ggagcaaaatgagtgaatctacactgtaaa 964 |||||||||||||||||||| ||| ||||| Sbjct: 156116 ggagcaaaatgagtgaatctgcaccgtaaa 156087 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 ||||||| || ||||||||||| |||||||||| ||||||| Sbjct: 172854 tactcccaccattcctaaatatttgtctttttagagatttca 172895 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1013 aagacttatatttaagaagggagggagta 1041 |||||||||||||| ||| |||||||||| Sbjct: 152220 aagacttatatttaggaacggagggagta 152248
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 76345 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtcta 76297 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||| |||||||||||||||||||||||| Sbjct: 76229 tactccctctgttcctaaatataagtctttttag 76262 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 ||||||||||||||| ||||||||||||| Sbjct: 76393 tactccctccgttccataatataagtcttt 76364 Score = 42.1 bits (21), Expect = 9.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||||| || || |||||||| ||||||||||||| ||| ||||||||| Sbjct: 76333 tccgtatgtagtcacttgttgaaacctctagaaagacttatattatggaacggagggagt 76392 Query: 1041 a 1041 | Sbjct: 76393 a 76393
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 32216 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtcta 32264 Score = 50.1 bits (25), Expect = 0.040 Identities = 46/53 (86%) Strand = Plus / Minus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||||| |||||||||| ||||| ||||| |||| || |||||||| Sbjct: 17072 agactacatacgaagcaaaatgaatgaatacacactttaaaatacgtctatat 17020 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtc 708 ||||||||| ||||||||||||||||| Sbjct: 16966 tactccctctgttcctaaatataagtc 16992
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 81.8 bits (41), Expect = 1e-11 Identities = 47/49 (95%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 50028 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtcta 49980 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||| |||||||||||||||||||||||| Sbjct: 49912 tactccctctgttcctaaatataagtctttttag 49945 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 ||||||||||||||| ||||||||||||| Sbjct: 50076 tactccctccgttccataatataagtcttt 50047 Score = 42.1 bits (21), Expect = 9.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||||| || || |||||||| ||||||||||||| ||| ||||||||| Sbjct: 50016 tccgtatgtagtcacttgttgaaacctctagaaagacttatattatggaacggagggagt 50075 Query: 1041 a 1041 | Sbjct: 50076 a 50076
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 81.8 bits (41), Expect = 1e-11 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||||||||||||||||||||||||| |||| | |||||||| | |||||| Sbjct: 7819 gactacatacggagcaaaatgagtgaatctacactctaaaatgtgtctata-tacatccg 7761 Query: 985 tatgt 989 ||||| Sbjct: 7760 tatgt 7756 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 7867 tactccctccgttcctaaatat 7846
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 81.8 bits (41), Expect = 1e-11 Identities = 100/117 (85%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgt 985 ||||||||| | ||||| || |||||||||||| ||||||||||||||| | ||||||| Sbjct: 6312 actacatacaaaacaaaaagaatgaatctacactctaaagtatgtctata-tacatccgt 6254 Query: 986 atgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||||| |||||| || |||||||| |||||||||| ||| ||||||||||| Sbjct: 6253 atgtagtc-cttagtgaaatctctaaaatgacttatattatggaacggagggagtag 6198 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||| |||||||||| |||||| |||||||||| Sbjct: 6199 tactccctccgttccataatataagtcattttagagatttcacta 6243 Score = 52.0 bits (26), Expect = 0.010 Identities = 38/42 (90%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 ||||||||| |||| |||||||||||||||| || ||||||| Sbjct: 6361 tactccctctgttcttaaatataagtcttttaagcgatttca 6320 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggagggagta 1041 |||||||||||||||||||| ||||||||| Sbjct: 6331 aaaagacttatatttaagaacagagggagta 6361
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 79.8 bits (40), Expect = 4e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||| ||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 44743 gactacatacagagcaaaatgagtaaatctacactgtaaaatatgtctatat 44794 Score = 79.8 bits (40), Expect = 4e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||| ||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 198497 gactacatacagagcaaaatgagtaaatctacactgtaaaatatgtctatat 198548
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 79.8 bits (40), Expect = 4e-11 Identities = 98/116 (84%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 |||||||| |||||||||||||||||||||| | |||| ||||| |||| | ||| |||| Sbjct: 23324 ctacatacagagcaaaatgagtgaatctacattctaaaatatgtttata-tacattcgta 23382 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagtag 1042 |||||| |||||| || || || ||||||||||||||| ||| |||||||||| Sbjct: 23383 tgtagttcattagtgaaatctttagaaagacttatatttaggaacagagggagtag 23438 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 23274 tactccctccgttcctaaatataagtcttttaaggaatttcacta 23318 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||| |||||||||||||||||||| || |||||||||| Sbjct: 23437 tactccctctgttcctaaatataagtctttctaaagatttcacta 23393 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||| ||| ||||||||||| Sbjct: 23304 aaaagacttatatttaggaacggagggagtag 23273 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 22926 tactccctccgttcctaaata 22946
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 77.8 bits (39), Expect = 2e-10 Identities = 48/51 (94%) Strand = Plus / Plus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 172967 actacatacggaacaaaatgagtgaatctacactctaaattatgtctatat 173017 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 687 cctccgttcctaaatataagtctttttag 715 |||||||||| |||| ||||||||||||| Sbjct: 173198 cctccgttccaaaatctaagtctttttag 173170
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 77.8 bits (39), Expect = 2e-10 Identities = 48/51 (94%) Strand = Plus / Minus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctat 974 |||||||||||||||||||||||||||||||||||| || | ||||||||| Sbjct: 10502 agactacatacggagcaaaatgagtgaatctacactttagaatatgtctat 10452 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataagtctttttag 715 ||||||||||||||||||||||||||||| | |||||| Sbjct: 10383 ttattactccctccgttcctaaatataagaccttttag 10420 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Plus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatattt 1025 |||||||||||||||||| || || |||||||| | ||||||||| Sbjct: 10489 tccgtatgtagtcttttaatgaaatctctaaaaggtcttatattt 10533
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 77.8 bits (39), Expect = 2e-10 Identities = 102/119 (85%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||||||||||| |||||||||||| |||||||| | ||||||||| |||| | |||| Sbjct: 7448 agactacatacgaagcaaaatgagttaatctacattctaaagtatggttata-tacatct 7506 Query: 984 gtatgtagtcttttagtggaacctc-taaaaagacttatatttaagaagggagggagta 1041 |||||||||| |||||||| ||| ||||||||||||||||| ||| |||||||||| Sbjct: 7507 gtatgtagtc-catagtggaatctcaaaaaaagacttatatttaggaacggagggagta 7564 Score = 63.9 bits (32), Expect = 3e-06 Identities = 32/32 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttttt 713 |||||||||||||||||||||||||||||||| Sbjct: 7564 tactccctccgttcctaaatataagtcttttt 7533 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 7402 tactccctccgttcctaaatacaagtccttttaaagatttcacta 7446
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 75.8 bits (38), Expect = 7e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 440 tactccctccgttcctaaatataagtctttgtagagatttcactag 395 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 979 catccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggaggga 1038 ||||||||||||||| ||||| || ||||| ||||||||||||||| ||| ||||||| Sbjct: 378 catccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggaggga 437 Query: 1039 gta 1041 ||| Sbjct: 438 gta 440
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 73.8 bits (37), Expect = 3e-09 Identities = 99/117 (84%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||| | ||||||||| |||||| || |||||||||| |||| | |||||| Sbjct: 2322 gactacatacggatccaaatgagtggatctactctctaaagtatgtttata-tacatccg 2264 Query: 985 tatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| || | || || || |||||||||||||||||| ||| ||||| |||| Sbjct: 2263 tatgtagt-ttgtgatgaaatctataaaaagacttatatttaggaatggaggcagta 2208 Score = 52.0 bits (26), Expect = 0.010 Identities = 38/42 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 2208 tactgcctccattcctaaatataagtctttttatagatttca 2249
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 73.8 bits (37), Expect = 3e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 966 gactacatacggagcaaaatgagtgaatctacactctaaaacatgtcta 1014 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 918 tactccctccgttcctaaata 938
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 73.8 bits (37), Expect = 3e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 966 gactacatacggagcaaaatgagtgaatctacactctaaaacatgtcta 1014 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 918 tactccctccgttcctaaata 938
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 73.8 bits (37), Expect = 3e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 817 tactccctccgttcctaaatataagtcttttaagcgatttcacta 861 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||| ||||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 867 ctacattcggagcaaaatgattgaatctatactctaaagtatgtctatat 916 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1011 aaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||| ||| ||||||||||| Sbjct: 847 aaaagacttatatttaggaacggagggagtag 816
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 73.8 bits (37), Expect = 3e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||| ||||||||| |||| |||||||| Sbjct: 1261 gactacatacggagcaaaatgagtgtatctacactctaaaatatgtcta 1309 Score = 63.9 bits (32), Expect = 3e-06 Identities = 32/32 (100%) Strand = Plus / Minus Query: 684 ctccctccgttcctaaatataagtctttttag 715 |||||||||||||||||||||||||||||||| Sbjct: 1375 ctccctccgttcctaaatataagtctttttag 1344 Score = 50.1 bits (25), Expect = 0.040 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1007 tctaaaaagacttatatttaagaagggagggag 1039 |||||||||||||||||||| ||| |||||||| Sbjct: 1343 tctaaaaagacttatatttaggaacggagggag 1375 Score = 46.1 bits (23), Expect = 0.62 Identities = 53/63 (84%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagt 1040 ||||||||||||| || ||||| ||||| |||||||||||||| ||| |||||||| Sbjct: 1273 tccgtatgtagtcacttgttggaatctctagaaagacttatatttgggaacagagggagt 1214 Query: 1041 aga 1043 ||| Sbjct: 1213 aga 1211 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||| ||||| |||||||||||||| ||| |||| Sbjct: 1213 tactccctctgttcccaaatataagtctttctagagatt 1251
>gb|DQ886922.1| Triticum monococcum subsp. monococcum VIL1 protein (VIL1) gene, complete cds Length = 4957 Score = 71.9 bits (36), Expect = 1e-08 Identities = 58/64 (90%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 979 catccgtatgtagtcttt-tagtggaacctctaaaaagacttatatttaagaagggaggg 1037 |||||| ||||||||||| |||||||| |||||||| |||||||||||| ||| |||||| Sbjct: 4011 catccgaatgtagtctttatagtggaatctctaaaaggacttatatttaggaacggaggg 4070 Query: 1038 agta 1041 |||| Sbjct: 4071 agta 4074 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct: 3910 tactccctccgttcctaaatataagtctttgtagagattccacta 3954 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||||| |||||| |||| ||||| Sbjct: 4074 tactccctccgttcctaaatataagtccttttagagattccacta 4030 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| ||||| ||||||||||||||| ||| |||||||||| Sbjct: 3954 tagtggaatctctacaaagacttatatttaggaacggagggagta 3910
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 71.9 bits (36), Expect = 1e-08 Identities = 58/64 (90%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 979 catccgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggaggga 1038 |||||||||||||| || ||||| || ||||||||||||||| ||||||||| ||||||| Sbjct: 10112 catccgtatgtagt-ttgtagtgaaatctctaaaaagacttacatttaagaacggaggga 10170 Query: 1039 gtag 1042 |||| Sbjct: 10171 gtag 10174 Score = 65.9 bits (33), Expect = 7e-07 Identities = 43/45 (95%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 10045 tactccctcc-ttcctaaatataagtctttttagagatttcacta 10088 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||||| ||||| ||||||||||||| |||||||||| Sbjct: 10173 tactccctccgttcttaaatgtaagtctttttagagatttcacta 10129 Score = 50.1 bits (25), Expect = 0.040 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| || ||||||||||||||||||||| ||| |||||||||| Sbjct: 10088 tagtgaaatctctaaaaagacttatatttaggaa-ggagggagta 10045
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaa 964 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 56825 gactacatacggagcaaaatgagtgaatctacactctaaa 56864 Score = 63.9 bits (32), Expect = 3e-06 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 931 atacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgta 990 |||| |||||| |||||||||| || ||| |||| |||||||||| | ||| | |||||| Sbjct: 59995 atacagagcaacatgagtgaatttatactctaaattatgtctata-tacattcatatgta 59937 Query: 991 gtcttttagtggaacctctaaaaagacttatattta 1026 || |||||||| ||||| |||||| |||| |||||| Sbjct: 59936 gtgttttagtgaaacctgtaaaaaaacttttattta 59901 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 683 actccctccgttcctaaatataagtctttt 712 |||||||||||||||||||||||| ||||| Sbjct: 56779 actccctccgttcctaaatataagcctttt 56808 Score = 44.1 bits (22), Expect = 2.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataagtcttttta 714 ||||||||||| |||||| ||||||| |||| |||||| Sbjct: 59881 tttattactccatccgtttctaaataaaagttttttta 59918
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 71.9 bits (36), Expect = 1e-08 Identities = 48/52 (92%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 ||||| ||||||||||||||||||||||||||||| |||| || |||||||| Sbjct: 431 gactatatacggagcaaaatgagtgaatctacactctaaaatacgtctatat 482 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 382 ttactccctccgttcctaaatataggtctttgtagagatttca 424 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 689 tccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||| |||||||||||| ||||||| Sbjct: 540 tccgttcctaaatacaagtctttttagagatttca 506
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 69.9 bits (35), Expect = 4e-08 Identities = 96/115 (83%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 ||||||||||| |||||||| ||||| |||||| |||| |||||||||| | ||| |||| Sbjct: 30387 ctacatacggaacaaaatgattgaatatacactctaaaatatgtctata-tacattcgta 30329 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||| | || || ||||| |||||||||||||||||| || |||||||||| Sbjct: 30328 tgtaattcactaatgaaacctgtaaaaagacttatatttagaaacggagggagta 30274 Score = 69.9 bits (35), Expect = 4e-08 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 961 taaagtatgtctatattccatccgtatgtagtcttttagtggaacctctaaaaagactta 1020 |||||||||||||||| | ||||||||||||| | || || |||||||||||||||||| Sbjct: 197575 taaagtatgtctatatac-atccgtatgtagtttaataatgaaacctctaaaaagactta 197633 Query: 1021 tatttaagaagggagggagtaga 1043 |||||| || | |||||||||| Sbjct: 197634 tatttagaaacgaagggagtaga 197656 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 |||||||||||||||||||| ||||||||| ||| |||||||||| Sbjct: 143568 tactccctccgttcctaaatgtaagtctttctagaaatttcactag 143613 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactag 727 ||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 143731 tactccctccgttactaaatataagtcttttaagagattttactag 143686 Score = 60.0 bits (30), Expect = 4e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||||||| |||||||||| ||||||||| ||||| |||| | |||||| Sbjct: 208503 tactccctccgtttctaaatataaatctttttagagattttactaagtgactac 208450 Score = 58.0 bits (29), Expect = 2e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttta 714 ||||||||||||| ||||||||||||||||||| Sbjct: 30274 tactccctccgtttctaaatataagtcttttta 30306 Score = 56.0 bits (28), Expect = 6e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgattt 721 |||||||||||| |||||||||||||||||| || ||||| Sbjct: 197492 tactccctccgtccctaaatataagtcttttaagcgattt 197531 Score = 52.0 bits (26), Expect = 0.010 Identities = 84/102 (82%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 941 aaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgtagtcttttagt 1000 |||||||||||| || | | |||| ||||| ||||| | |||||||||||||| |||| Sbjct: 143667 aaatgagtgaatatatattttaaaatatgtttatatac-atccgtatgtagtccactagt 143609 Query: 1001 ggaacctctaaaaagacttatatttaagaagggagggagtag 1042 | || |||| ||||||||| ||||| ||| ||||||||||| Sbjct: 143608 gaaatttctagaaagacttacatttaggaacggagggagtag 143567 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||| |||| |||||||||||||||||||| Sbjct: 197654 tactcccttcgtttctaaatataagtctttttag 197621 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||| |||||||||| |||| || ||||| |||| Sbjct: 30437 tactccctccgttccgaaatataagttttttaagcgattttacta 30393 Score = 46.1 bits (23), Expect = 0.62 Identities = 50/59 (84%) Strand = Plus / Plus Query: 983 cgtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||||||||| ||||| || ||||||||||| ||||||||| || |||||||||| Sbjct: 208445 cgtatgtagtcacttagtaaaatctctaaaaagatttatatttagaaacggagggagta 208503 Score = 44.1 bits (22), Expect = 2.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1006 ctctaaaaagacttatatttaagaagggagggagtaga 1043 |||| |||||||||||||||| || |||||||||||| Sbjct: 143696 ctcttaaaagacttatatttagtaacggagggagtaga 143733
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct: 8565 attactccctccgttcctaaatataagtctttgtagagattccacta 8611 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||||||||||||||||||| | ||| |||||||||| Sbjct: 8723 tactccctccgttcctaaatataagtctctgtagagatttcacta 8679 Score = 63.9 bits (32), Expect = 3e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaa 964 ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 8676 gactacatacgaagcaaaatgagtgaatctacactctaaa 8637 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||||| ||||| ||||||||||||||| ||| |||||||||| Sbjct: 8611 tagtggaatctctacaaagacttatatttaggaacggagggagta 8567 Score = 42.1 bits (21), Expect = 9.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| || ||||| | ||||||||||||| ||| |||||||||| Sbjct: 8679 tagtgaaatctctacagagacttatatttaggaacggagggagta 8723
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 69.9 bits (35), Expect = 4e-08 Identities = 94/111 (84%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 931 atacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgta 990 ||||||||||||||||||||||||| ||| |||| | |||||||| | |||||||||||| Sbjct: 1140 atacggagcaaaatgagtgaatctatactctaaaatgtgtctata-tacatccgtatgta 1082 Query: 991 gtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 || | |||| || ||||| || | |||||||||| ||| |||||||||| Sbjct: 1081 gt-tcatagtaaaatctctagaaggtcttatatttaggaacggagggagta 1032 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 1032 tactccctccgttcctaaatataag 1056 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Minus Query: 924 agactacatacggagcaaaatgagtgaat 952 |||||||||||||| |||||||||||||| Sbjct: 1334 agactacatacggaacaaaatgagtgaat 1306 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatata 704 ||||||||| |||||||||||||||| Sbjct: 1193 tattactccatccgttcctaaatata 1218 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1017 cttatatttaagaagggagggagta 1041 |||||||||||||| |||||||||| Sbjct: 1170 cttatatttaagaacggagggagta 1194 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||||| |||||||||| Sbjct: 1194 tactccctccgttcttaaatataag 1170 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||| |||||||||||||||||| Sbjct: 1217 tactccatccgttcctaaatataag 1241 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||| ||||||||||||||||||| Sbjct: 1378 tactctctccgttcctaaatataag 1354
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/100 (85%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 927 ctacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgta 986 ||||||||||| ||||||||||||||||| ||| ||| | |||||||| | |||||||| Sbjct: 3892 ctacatacggaacaaaatgagtgaatctatactctaavatgtgtctata-tacatccgta 3950 Query: 987 tgtagtcttttagtggaacctctaaaaagacttatattta 1026 |||||| | |||||||| ||||| || | |||||||||| Sbjct: 3951 tgtagt-tcatagtggaatctctagaaggtcttatattta 3989 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 3843 tactccctccgttcctaaatat 3864
>emb|CT009588.1| Triticum turgidum Length = 136372 Score = 65.9 bits (33), Expect = 7e-07 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||| ||||||| |||||||||||| |||| |||||||||| | |||||| Sbjct: 109186 gactacatacggaaaaaaatgaatgaatctacactctaaaatatgtctata-tacatccg 109244 Query: 985 tatgt 989 ||||| Sbjct: 109245 tatgt 109249 Score = 63.9 bits (32), Expect = 3e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaa 964 ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 40542 gactacatatggagcaaaatgagtgaatctacactctaaa 40503 Score = 52.0 bits (26), Expect = 0.010 Identities = 38/42 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 109138 tactccctccgttcctaaatatttgtctttctagagatttca 109179 Score = 52.0 bits (26), Expect = 0.010 Identities = 39/42 (92%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| ||||||||| |||||||| Sbjct: 109301 tactccctccgttcctaaatatttgtcttttta-tgatttca 109261 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctt 710 ||||||||||||||| ||||||||||||| Sbjct: 40427 tactccctccgttccaaaatataagtctt 40455
>emb|CT009585.1| Triticum aestivum Length = 103189 Score = 65.9 bits (33), Expect = 7e-07 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||||| ||||||| |||||||||||| |||| |||||||||| | |||||| Sbjct: 75487 gactacatacggaaaaaaatgaatgaatctacactctaaaatatgtctata-tacatccg 75545 Query: 985 tatgt 989 ||||| Sbjct: 75546 tatgt 75550 Score = 63.9 bits (32), Expect = 3e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaa 964 ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 6845 gactacatatggagcaaaatgagtgaatctacactctaaa 6806 Score = 52.0 bits (26), Expect = 0.010 Identities = 38/42 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 75439 tactccctccgttcctaaatatttgtctttctagagatttca 75480 Score = 52.0 bits (26), Expect = 0.010 Identities = 39/42 (92%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| ||||||||| |||||||| Sbjct: 75602 tactccctccgttcctaaatatttgtcttttta-tgatttca 75562 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctt 710 ||||||||||||||| ||||||||||||| Sbjct: 6730 tactccctccgttccaaaatataagtctt 6758
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||| ||||||||||||||||||||||||| ||| |||||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtctttgtagagatttcacta 23228 Score = 63.9 bits (32), Expect = 3e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttagtgatt 720 ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 51933 ttactccctccgttcctaaatataagtctttctagagatt 51894 Score = 61.9 bits (31), Expect = 1e-05 Identities = 37/39 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 |||||||||||||||||||||||||||||| ||||||| Sbjct: 23112 tactccctccgttcctaaatataagtctttgaagtgatt 23150 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||| ||||||||||||||||||||||||||| Sbjct: 51768 tactccttccgttcctaaatataagtctttttag 51801 Score = 52.0 bits (26), Expect = 0.010 Identities = 98/118 (83%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 924 agactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatcc 983 |||| ||||| ||||||||||||||||||||| ||| |||| | |||||| | ||||| Sbjct: 23158 agaccacataaggagcaaaatgagtgaatctatact-taaaatgcatctata-tacatcc 23215 Query: 984 gtatgtagtcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 |||||| || | ||||| || ||||| ||||||||||||||| ||| ||||| |||| Sbjct: 23216 gtatgtggt-tcatagtgaaatctctacaaagacttatatttaggaacggaggaagta 23272 Score = 48.1 bits (24), Expect = 0.16 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1007 tctaaaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||||||| ||| ||| ||||||| Sbjct: 51802 tctaaaaagacttatatttaggaacggaaggagtag 51767 Score = 48.1 bits (24), Expect = 0.16 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1006 ctctaaaaagacttatatttaagaagggagggagta 1041 ||||| ||||||||||||||| ||| |||||||||| Sbjct: 51897 ctctagaaagacttatatttaggaacggagggagta 51932 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1012 aaagacttatatttaagaagggagggagtag 1042 ||||||||||||||| ||| ||||||||||| Sbjct: 23141 aaagacttatatttaggaacggagggagtag 23111
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 65.9 bits (33), Expect = 7e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||||||||||||| ||| || | |||||||| Sbjct: 24758 gactacatacggagcaaaatgagtgaatctagactctagaatatgtcta 24806 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttag 715 ||||||||| |||||| |||||| ||||||||||| Sbjct: 24875 ttactcccttcgttcccaaatattagtctttttag 24841
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 65.9 bits (33), Expect = 7e-07 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 ||||||||||| || ||||||||| |||||||||| |||| |||||||||| | |||||| Sbjct: 1032 gactacatacgaagtaaaatgagttaatctacactctaaaatatgtctata-tacatccg 974 Query: 985 tatgt 989 ||||| Sbjct: 973 tatgt 969
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 65.9 bits (33), Expect = 7e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||| ||||||||||||||||||| ||| |||||||||| Sbjct: 2785 tactccctccattcctaaatataagtctttgtagagatttcacta 2829 Score = 60.0 bits (30), Expect = 4e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttt 711 |||||||||||||||||||||||||||||| Sbjct: 2946 tactccctccgttcctaaatataagtcttt 2917 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Minus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| || ||||| ||||||||||||||| ||| |||||||||| Sbjct: 2829 tagtgaaatctctacaaagacttatatttaggaatggagggagta 2785 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1012 aaagacttatatttaagaagggagggagta 1041 ||||||||||||||| ||| |||||||||| Sbjct: 2917 aaagacttatatttaggaacggagggagta 2946
>gb|DQ995512.1| Hordeum vulgare clone 604d05_c-100 genomic sequence Length = 16633 Score = 63.9 bits (32), Expect = 3e-06 Identities = 57/64 (89%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 929 acatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatg 988 ||||||| |||||||| |||||||||| | | ||||||||||||||| | |||||||||| Sbjct: 11964 acatacgaagcaaaataagtgaatctatagtttaaagtatgtctata-tacatccgtatg 11906 Query: 989 tagt 992 |||| Sbjct: 11905 tagt 11902 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaata 702 |||| ||||||||||||||||||||| Sbjct: 12015 tttactactccctccgttcctaaata 11990
>dbj|AB272098.1| Triticum aestivum DNA, waxy gene related sequence Length = 1852 Score = 63.9 bits (32), Expect = 3e-06 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgt 985 |||||||| ||||||||||||||||||||||||| |||| || |||||| | ||||||| Sbjct: 916 actacatatggagcaaaatgagtgaatctacactctaaa-tagatctata-tacatccgt 973 Query: 986 atgtagtc 993 |||||||| Sbjct: 974 atgtagtc 981 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactagga 729 |||||||| ||||||||||||||||| ||||||| |||| || ||||| Sbjct: 868 tactcccttcgttcctaaatataagtatttttagagattccaatagga 915 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1000 tggaacctctaaaaagacttatatttaagaagggagggagta 1041 ||||| ||||||||| ||||||||||| ||| | |||||||| Sbjct: 909 tggaatctctaaaaatacttatatttaggaacgaagggagta 868
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 63.9 bits (32), Expect = 3e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||||||||||| |||||||| ||| |||| |||||||| Sbjct: 1812 actacatacggagcaaaatgaatgaatctatactttaaaatatgtcta 1765 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 1870 tactccctccgttcctaaatat 1849
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 63.9 bits (32), Expect = 3e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 688 ctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 ||||||||| ||||||||||||| ||| ||||||||||||||||||| Sbjct: 11655 ctccgttccaaaatataagtcttcttaaagatttcactaggagactac 11702 Score = 60.0 bits (30), Expect = 4e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctata 975 |||||||||||||| |||||||||||| ||| |||||| |||| | |||||||| Sbjct: 11694 ggagactacatacgaagcaaaatgagtaaatttacactctaaattgtgtctata 11747 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||| |||||||||| | ||||||||||| ||||| |||| Sbjct: 11566 attactccctcggttcctaaatgttagtctttttagagattttacta 11520
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 63.9 bits (32), Expect = 3e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcactaggagact 733 |||||| ||||||||||||||||||||||||||| |||||| |||| |||| Sbjct: 1906 tactccatccgttcctaaatataagtctttttagacatttcaataggggact 1957 Score = 52.0 bits (26), Expect = 0.010 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1007 tctaaaaagacttatatttaagaagggagggagtagat 1044 |||||||||||||||||||| ||| ||| ||||||||| Sbjct: 1940 tctaaaaagacttatatttaggaacggatggagtagat 1903
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 61.9 bits (31), Expect = 1e-05 Identities = 31/31 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttt 712 ||||||||||||||||||||||||||||||| Sbjct: 148724 tactccctccgttcctaaatataagtctttt 148694 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggagggagtag 1042 |||||||||||||||| ||| ||||||||||| Sbjct: 148694 aaaagacttatatttaggaacggagggagtag 148725
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 61.9 bits (31), Expect = 1e-05 Identities = 34/35 (97%) Strand = Plus / Plus Query: 689 tccgttcctaaatataagtctttttagtgatttca 723 ||||||||||||||||||||||||||| ||||||| Sbjct: 260165 tccgttcctaaatataagtctttttagagatttca 260199 Score = 58.0 bits (29), Expect = 2e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtcta 973 ||||||||||||| |||||||| |||||||||| | |||| |||||||| Sbjct: 355556 gactacatacggaacaaaatgaatgaatctacattttaaaatatgtcta 355604 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||| ||| |||||||||||| ||||||| Sbjct: 336064 tactccctctgttactaaatataagtatttttag 336097 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 699 aatataagtctttttagtgatttca 723 ||||||||||||||||| ||||||| Sbjct: 259914 aatataagtctttttagagatttca 259938 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1006 ctctaaaaagacttatattta 1026 ||||||||||||||||||||| Sbjct: 260193 ctctaaaaagacttatattta 260173
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 61.9 bits (31), Expect = 1e-05 Identities = 31/31 (100%) Strand = Plus / Plus Query: 676 gtttattactccctccgttcctaaatataag 706 ||||||||||||||||||||||||||||||| Sbjct: 25818 gtttattactccctccgttcctaaatataag 25848 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||||||||| |||||| Sbjct: 26176 tactccctccgttcctaattataag 26152
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 60.0 bits (30), Expect = 4e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 923 gagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 ||||||| ||||| |||||||||| |||| ||||||| |||| ||||||||||| Sbjct: 27483 gagactatatacgaagcaaaatgaatgaacctacactttaaattatgtctatat 27536 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttta 714 |||| ||||||||||||||||||| | |||||| Sbjct: 27437 tacttcctccgttcctaaatataaatattttta 27469
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacact 959 |||||||||||||||||||||||||||| ||||| Sbjct: 349 actacatacggagcaaaatgagtgaatccacact 316
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||||||||||||||||| ||||||| Sbjct: 1134 tactccctccgttcctaaatataagtttttttag 1101 Score = 52.0 bits (26), Expect = 0.010 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1007 tctaaaaagacttatatttaagaagggagggagtagat 1044 |||||||| ||||||||||| ||| ||||||||||||| Sbjct: 1100 tctaaaaaaacttatatttaggaacggagggagtagat 1137 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 972 tactccctccgttcctaaatat 993
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 58.0 bits (29), Expect = 2e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 ||||||||||||||||||||||||| | |||||| |||| ||||| Sbjct: 703 tactccctccgttcctaaatataagaccttttagagattacacta 747 Score = 54.0 bits (27), Expect = 0.003 Identities = 91/110 (82%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 932 tacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgtag 991 |||| ||||||||||||||||||||| |||| |||| ||| || |||||||||||| Sbjct: 757 tacgaagcaaaatgagtgaatctacatcctaaaatatgactacat--aatccgtatgtag 814 Query: 992 tcttttagtggaacctctaaaaagacttatatttaagaagggagggagta 1041 | | |||||||| |||||||| | |||||||||| ||| ||||| |||| Sbjct: 815 t-tcatagtggaatctctaaaatgtcttatatttaggaacggaggaagta 863 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||| |||||||||||||||||||| | |||||| |||| ||||| Sbjct: 863 tacttcctccgttcctaaatataagacattttagagattccacta 819 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Minus Query: 997 tagtggaacctctaaaaagacttatatttaagaagggagggagtagat 1044 ||||| || |||||||| | |||||||||| ||| ||||||||||||| Sbjct: 747 tagtgtaatctctaaaaggtcttatatttaggaacggagggagtagat 700
>gb|DQ995511.1| Hordeum vulgare clone 509d02_c-84 genomic sequence Length = 13774 Score = 56.0 bits (28), Expect = 6e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 941 aaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||||| |||||| |||||||||||||||| Sbjct: 9112 aaatgagtgaatatacactctaaagtatgtctatat 9147 Score = 48.1 bits (24), Expect = 0.16 Identities = 45/52 (86%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||| |||||||||| |||||| ||| | |||| ||||||||||| Sbjct: 11142 gactacatacaaagcaaaatgaatgaatccacattctaaattatgtctatat 11091 Score = 48.1 bits (24), Expect = 0.16 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1006 ctctaaaaagacttatatttaagaagggagggagta 1041 |||||||||||| ||||||||||| |||||||||| Sbjct: 11154 ctctaaaaagacaaatatttaagaacggagggagta 11189 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 |||||||||||||| ||||||| |||||||||| |||| Sbjct: 11189 tactccctccgttcttaaatatttgtctttttagagatt 11151
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctaca 957 ||||||||| |||||||||||||||||||||| Sbjct: 537 actacatacagagcaaaatgagtgaatctaca 506 Score = 50.1 bits (25), Expect = 0.040 Identities = 43/49 (87%) Strand = Plus / Minus Query: 675 tgtttattactccctccgttcctaaatataagtctttttagtgatttca 723 ||||||||||||| |||| ||||||||||||| |||||| ||||||| Sbjct: 592 tgtttattactccatccggtcctaaatataagatcttttagagatttca 544
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 56.0 bits (28), Expect = 6e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaa 964 ||||||||| | ||||||||||||||||||||||| |||| Sbjct: 2295 gactacataagaagcaaaatgagtgaatctacactctaaa 2256 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 ||||||||||| | ||||||||||| | |||||| ||||||| Sbjct: 2181 tactccctccgcttctaaatataagaccttttagagatttca 2222
>ref|XM_001174677.1| PREDICTED: Pan troglodytes similar to transcription factor FREAC-2 (LOC750558), mRNA Length = 2634 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 94 gaccacctcctcctcttcgtcgtcctcctcc 124 ||||||||||||||| ||||||||||||||| Sbjct: 660 gaccacctcctcctcctcgtcgtcctcctcc 690
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagtcttttt 713 |||||||||||| || ||||||||||||||||||| Sbjct: 8720 tattactccctctgtacctaaatataagtcttttt 8686 Score = 52.0 bits (26), Expect = 0.010 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 981 tccgtatgtagtcttttagtggaacctctaaaaagacttatattta 1026 |||||||||||| || || ||||| ||||||||||||||||||||| Sbjct: 8619 tccgtatgtagt-ttatattggaatctctaaaaagacttatattta 8575 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 8560 tactccatccatccctaaatataagtctttttagagatt 8598
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 676 gtttattactccctccgttcctaaatataag 706 ||||||||||||||||||||| ||||||||| Sbjct: 76697 gtttattactccctccgttccaaaatataag 76727
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||||||||||||| Sbjct: 99791 attactccctccgttcctaaatataag 99817
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 676 gtttattactccctccgttcctaaatataag 706 ||||||||||||||||||||| ||||||||| Sbjct: 16627741 gtttattactccctccgttccaaaatataag 16627771 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||||||||||||||| Sbjct: 23765987 ttattactccctccgttcctaaatat 23765962 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||| ||||||||||||||| ||||||| || ||||||| Sbjct: 732111 tttagtactccctccgttccaaaatataggtatttttag 732149 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 18941127 tactccctccgttcctaaatat 18941148 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 21688923 tactccctccgtcccaaaatataagtatttttag 21688890 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 2885897 tattactccctccgtttctaaatat 2885873 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 6469300 tactccctccgtccctaaatataag 6469276 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7459025 tactccctccgtccctaaatataag 7459049 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 10597589 tactccctccgtccctaaatataag 10597613 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 16892948 tactccctccgttccaaaatataag 16892924 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaat 701 ||||||||||||||||||||| Sbjct: 19335051 ttactccctccgttcctaaat 19335031 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 24733953 tactccctccgttccaaaatataag 24733929 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 27544656 tactccctccgtccctaaatataag 27544680
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||||||||||||| ||||| |||||||||| ||||||| Sbjct: 23581135 tttattactccctcagttccaaaatataagtatttttag 23581097 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||| |||||||||||| ||||||| Sbjct: 20310814 tactccctccgttactaaatataagtatttttag 20310847 Score = 50.1 bits (25), Expect = 0.040 Identities = 31/33 (93%) Strand = Plus / Plus Query: 671 tgtttgtttattactccctccgttcctaaatat 703 |||| |||||||||||||||||| ||||||||| Sbjct: 19386669 tgttagtttattactccctccgtccctaaatat 19386701 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 ||||||||||||||||||||||||| Sbjct: 21272227 tattactccctccgttcctaaatat 21272203 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatat 703 |||||||||||||||||||||||| Sbjct: 541841 attactccctccgttcctaaatat 541864 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1008 ctaaaaagacttatatttaagaagggagggagtag 1042 ||||||| |||||||||| |||| ||||||||||| Sbjct: 4694273 ctaaaaatacttatattttagaacggagggagtag 4694239 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||||| |||||||||| ||||||| Sbjct: 4694240 tactccctccgttctaaaatataagtatttttag 4694273 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataa 705 ||||||||||||||||| |||||||| Sbjct: 13875399 attactccctccgttccaaaatataa 13875374 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 23412302 tactccctccgttcctaaatat 23412323 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1234 taaatagttttaaagatattggtagtcgaagtt 1266 ||||||||||||||| ||||| ||||| ||||| Sbjct: 3768397 taaatagttttaaagttattgatagtcaaagtt 3768429 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 4182398 tactccctccgttccaaaatataag 4182422 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 5226459 tactccctccgtccctaaatataag 5226483 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 17492900 tattactccctccgtttctaaatat 17492876 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 20237137 tactccctccgtccctaaatataag 20237161 Score = 42.1 bits (21), Expect = 9.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1006 ctctaaaaagacttatatttaagaagggagggagtag 1042 ||||||||| ||||||||||| || ||||||||||| Sbjct: 20310849 ctctaaaaatacttatatttagtaacggagggagtag 20310813 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1234 taaatagttttaaagatattggtagtcgaagtt 1266 |||||| |||||||| ||||||||||| ||||| Sbjct: 21899281 taaatatttttaaagttattggtagtcaaagtt 21899313 Score = 42.1 bits (21), Expect = 9.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 679 tattactccctccgttccta-aatataag 706 |||||||||||||||||||| |||||||| Sbjct: 25843603 tattactccctccgttcctacaatataag 25843631 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatata 704 |||||||||||||||||| |||||| Sbjct: 27343575 attactccctccgttccttaatata 27343551 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 29797595 tactccctccgttccaaaatataag 29797571
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagt 716 ||||||||||||||| |||||||||| |||||||| Sbjct: 6228133 tactccctccgttccaaaatataagtatttttagt 6228099 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataag 706 |||||||||||||||||||||||| Sbjct: 11591989 actccctccgttcctaaatataag 11591966 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 ||||||||||||| |||||||||||||| Sbjct: 14972536 tattactccctccattcctaaatataag 14972563 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataa 705 |||||||||||||||||||||||| Sbjct: 21121686 tactccctccgttcctaaatataa 21121709 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatata 704 ||||||||||||||||||||| |||||| Sbjct: 37292645 tttattactccctccgttccttaatata 37292618 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataag 706 |||||||||||||||||||||||| Sbjct: 42091242 actccctccgttcctaaatataag 42091219 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 |||||||||||||| |||||||||||| Sbjct: 13969099 attactccctccgtccctaaatataag 13969073 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataag 706 |||| ||||||||||||||| ||||||||| Sbjct: 4792432 tttagtactccctccgttccaaaatataag 4792403 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||| ||||||||||| Sbjct: 15711511 ttattactccctccattcctaaatat 15711486 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||| ||||||||||| Sbjct: 15728529 ttattactccctccattcctaaatat 15728504 Score = 44.1 bits (22), Expect = 2.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataagtctttttag 715 |||||||||||||||| || ||||||||| ||||||| Sbjct: 16353587 ttattactccctccgtcccaaaatataagcatttttag 16353624 Score = 44.1 bits (22), Expect = 2.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2101 gggaaatcaacctcaccaagatcgaaagccgtccacac 2138 |||| |||| ||||||||||||||| ||||| |||||| Sbjct: 18989258 gggacatcagcctcaccaagatcgagagccggccacac 18989295 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataag 706 ||||||||||||| |||||||||||| Sbjct: 22235778 ttactccctccgtccctaaatataag 22235753 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 685 tccctccgttcctaaatataag 706 |||||||||||||||||||||| Sbjct: 29946823 tccctccgttcctaaatataag 29946844 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataa 705 ||||||||||||||||| |||||||| Sbjct: 33182224 attactccctccgttccaaaatataa 33182249 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagt 707 ||||| |||||||||||||||||||| Sbjct: 36283443 tactcactccgttcctaaatataagt 36283468 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| |||| ||||| ||||||| Sbjct: 39669425 tactccctccgttccaaaatgtaagtatttttag 39669392 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 41720846 tactccctccgtcccaaaatataagtatttttag 41720879 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 41938601 tactccctccgtcccaaaatataagtatttttag 41938634 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||| ||||||||||||||| Sbjct: 42018193 cctcctcctcgtcgtcgtcctcctcc 42018218 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1234 taaatagttttaaagatattggtagtcgaagtt 1266 |||||| |||||||| ||||||||||| ||||| Sbjct: 5628784 taaatatttttaaagttattggtagtcaaagtt 5628752 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 ttgtttattactccctccgtt 694 ||||||||||||||||||||| Sbjct: 10936848 ttgtttattactccctccgtt 10936828 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 11769324 tactccctccgtccctaaatataag 11769348 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||| |||||||||||||||||||| Sbjct: 13968985 tacttcctccgttcctaaatataag 13969009 Score = 42.1 bits (21), Expect = 9.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| || ||||||||| ||||||| Sbjct: 26468019 tattactccctccgtcccaaaatataagcatttttag 26467983 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagt 707 ||||||||||||||| || |||||||||| Sbjct: 30249295 tattactccctccgtcccaaaatataagt 30249267 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 32624009 tactccctccgttccaaaatataag 32624033 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 42527434 tattactccctccgtttctaaatat 42527458
>emb|AL365258.24| Human DNA sequence from clone RP11-448G4 on chromosome 1 Contains the 5' end of a novel gene, a eukaryotic translation elongation factor 1 alpha (EEF1A) pseudogene, a novel pseudogene, a novel gene and a ribosomal protein L24 (RPL24) pseudogene, complete sequence Length = 129343 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||||||||||||||||||| |||| Sbjct: 116301 cctcctcctcttcgtcgtcctcctcctcgtc 116331
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 54.0 bits (27), Expect = 0.003 Identities = 45/51 (88%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatat 976 |||||||||||| |||||||| ||||| ||||| |||| ||||||||||| Sbjct: 482 actacatacggaacaaaatgaatgaatgtacacgctaaaatatgtctatat 432 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 530 tactccctccgttcctaaatat 509
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||||||||||||| ||||| |||||||||| ||||||| Sbjct: 23816 tttattactccctcagttccaaaatataagtatttttag 23778
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagt 716 ||||||||||||||| |||||||||| |||||||| Sbjct: 90331 tactccctccgttccaaaatataagtatttttagt 90297
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 675 tgtttattactccctccgttcctaaatataagtcttttt 713 |||||||||||||||||||||| ||||||| || ||||| Sbjct: 49310 tgtttattactccctccgttccaaaatataggtattttt 49348
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||||||||||||| Sbjct: 4475 attactccctccgttcctaaatataag 4501 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 4785 tactccctccgttcctaaatataag 4761
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||||||||||||| Sbjct: 3301 attactccctccgttcctaaatataag 3275
>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083, complete sequence Length = 120016 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataagtc 708 |||||||||||||||||||| |||||||||| Sbjct: 108537 ttattactccctccgttccttaatataagtc 108567
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||||||||||||| Sbjct: 44853 attactccctccgttcctaaatataag 44827 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataa 705 |||||||||||||||||||||||| Sbjct: 44547 tactccctccgttcctaaatataa 44570
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagtcttttt 713 |||||||||||| || ||||||||||||||||||| Sbjct: 17328 tattactccctctgtacctaaatataagtcttttt 17294 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatt 720 |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 17168 tactccatccatccctaaatataagtctttttagagatt 17206 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1000 tggaacctctaaaaagacttatattta 1026 ||||| ||||||||||||||||||||| Sbjct: 17209 tggaatctctaaaaagacttatattta 17183
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||||||||||||| ||||| |||||||||| ||||||| Sbjct: 137038 tttattactccctcagttccaaaatataagtatttttag 137000
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 54.0 bits (27), Expect = 0.003 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Plus Query: 922 ggagactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccat 981 |||||||||||||| |||||||||| ||||| || | | |||||| |||||||| | ||| Sbjct: 1244 ggagactacatacgaagcaaaatga-tgaat-tataatttaaagtgtgtctata-tacat 1300 Query: 982 ccgtatgtagtcttttagt 1000 ||||||||| ||||||||| Sbjct: 1301 ccgtatgtactcttttagt 1319 Score = 52.0 bits (26), Expect = 0.010 Identities = 44/50 (88%) Strand = Plus / Plus Query: 686 ccctccgttcctaaatataagtctttttagtgatttcactaggagactac 735 |||||| || ||||||||||| ||||||| ||||||| ||||||||||| Sbjct: 1203 ccctccttttctaaatataaggttttttagagatttcattaggagactac 1252
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||||||||||||||| Sbjct: 100947 ttattactccctccgttcctaaatat 100922
>gb|BT009452.1| Triticum aestivum clone wlmk8.pk0022.f7:fis, full insert mRNA sequence Length = 1996 Score = 52.0 bits (26), Expect = 0.010 Identities = 38/42 (90%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttca 723 |||||||||||||||||||||| ||||| |||| ||||||| Sbjct: 783 tactccctccgttcctaaatatttgtcttcttagagatttca 824 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatg 945 ||||||||||||||||||||| Sbjct: 891 gactacatacggagcaaaatg 871
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 683 actccctccgttcctaaatataagtctttt 712 |||||||| ||||||||||||||||||||| Sbjct: 2768 actccctctgttcctaaatataagtctttt 2797
>ref|XM_703260.1| PREDICTED: Danio rerio similar to high mobility group protein, transcript variant 2 (LOC560550), mRNA Length = 1432 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||||||||||||||||||| Sbjct: 969 cctcctcctcttcgtcgtcctcctcc 944
>ref|XM_681212.1| PREDICTED: Danio rerio similar to high mobility group protein, transcript variant 1 (LOC560550), mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||||||||||||||||||| Sbjct: 685 cctcctcctcttcgtcgtcctcctcc 660
>ref|XM_701915.1| PREDICTED: Danio rerio similar to high mobility group protein, transcript variant 2 (LOC556624), mRNA Length = 1432 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||||||||||||||||||| Sbjct: 969 cctcctcctcttcgtcgtcctcctcc 944
>ref|XM_678339.1| PREDICTED: Danio rerio similar to high mobility group protein, transcript variant 1 (LOC556624), mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||||||||||||||||||| Sbjct: 685 cctcctcctcttcgtcgtcctcctcc 660
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||| |||||||||||| ||||||| Sbjct: 41447 tactccctccgttactaaatataagtatttttag 41480 Score = 42.1 bits (21), Expect = 9.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1006 ctctaaaaagacttatatttaagaagggagggagtag 1042 ||||||||| ||||||||||| || ||||||||||| Sbjct: 41482 ctctaaaaatacttatatttagtaacggagggagtag 41446
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatata 704 |||||||||||||||||||||||||| Sbjct: 196547 tattactccctccgttcctaaatata 196522
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataag 706 |||||||||||||||||||||||||| Sbjct: 78660 ttactccctccgttcctaaatataag 78635 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagt 707 |||||||||||||||||| ||||||||| Sbjct: 58733 attactccctccgttccttaatataagt 58706 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatataag 706 ||||||||||||||| |||||||||| Sbjct: 78350 ttactccctccgttcataaatataag 78375
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Plus Query: 673 tttgtttattactccctccgttcctaaatataag 706 ||||||| ||||||||||||||||||| |||||| Sbjct: 17941 tttgtttgttactccctccgttcctaattataag 17974 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||||||||| |||||| Sbjct: 18258 tactccctccgttcctaattataag 18234
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatataag 706 |||||||||||||||||||||||||| Sbjct: 68702 ttactccctccgttcctaaatataag 68727 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 57033 tactccctccgttcctaaatataag 57057 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataag 706 |||| |||||||||||||||||| |||||| Sbjct: 57389 tttaatactccctccgttcctaattataag 57360 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaata 702 |||||||||||||||||||||| Sbjct: 69012 ttactccctccgttcctaaata 68991
>dbj|AP006132.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41P23, TM0230, complete sequence Length = 91079 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataagtc 708 |||||||||||||||||||| ||||||||| Sbjct: 74161 tattactccctccgttcctatatataagtc 74190
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 52.0 bits (26), Expect = 0.010 Identities = 29/30 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataagt 707 ||||||||||||||||| |||||||||||| Sbjct: 35296 ttattactccctccgtttctaaatataagt 35325
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 52.0 bits (26), Expect = 0.010 Identities = 32/34 (94%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||||||||||||| | |||||| Sbjct: 178140 tactccctccgttcctaaatataagacattttag 178107 Score = 44.1 bits (22), Expect = 2.5 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 940 aaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgtagtc 993 ||||||| |||||||| | |||| ||||||||||||| |||||||||||||| Sbjct: 167407 aaaatgaatgaatctatcttctaaaatatgtctatattc-atccgtatgtagtc 167355 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 926 actacatacggagcaaaatgagtgaatcta 955 ||||||||| ||||||||||||||||||| Sbjct: 178028 actacatacaaagcaaaatgagtgaatcta 178057 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 697 taaatataagtctttttagtgattt 721 |||||||||||| |||||||||||| Sbjct: 167326 taaatataagtcattttagtgattt 167350
>emb|AL929092.4| Zebrafish DNA sequence from clone DKEY-1M11 in linkage group 20, complete sequence Length = 130947 Score = 52.0 bits (26), Expect = 0.010 Identities = 26/26 (100%) Strand = Plus / Plus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||||||||||||||||||| Sbjct: 38655 cctcctcctcttcgtcgtcctcctcc 38680
>emb|CR855103.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0718E12, complete sequence Length = 90431 Score = 50.1 bits (25), Expect = 0.040 Identities = 31/33 (93%) Strand = Plus / Plus Query: 671 tgtttgtttattactccctccgttcctaaatat 703 |||| |||||||||||||||||| ||||||||| Sbjct: 36538 tgttagtttattactccctccgtccctaaatat 36570
>gb|AC158736.15| Medicago truncatula clone mth2-165n2, complete sequence Length = 118515 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||||| Sbjct: 114408 ttattactccctccgtttctaaatataag 114380
>gb|AC151528.37| Medicago truncatula clone mth2-135j6, complete sequence Length = 103338 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||||||| Sbjct: 48619 ttattactccctccggtcctaaatataag 48647
>gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete sequence Length = 117627 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||||||| Sbjct: 75406 ttattactccctccggtcctaaatataag 75378
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 26803 tactccctccgttcctaaatataag 26827 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 87453 attactccctccgttccaaaatataag 87427
>gb|BT013363.1| Lycopersicon esculentum clone 135358R, mRNA sequence Length = 1643 Score = 50.1 bits (25), Expect = 0.040 Identities = 133/169 (78%) Strand = Plus / Plus Query: 1968 gtcacccgctttatgatgcttgctcgggaacctattatacctcgggttgataaaccattc 2027 ||||||||||| | ||||| ||| |||| || ||||| ||||| ||||||||||||| Sbjct: 924 gtcacccgcttccttatgctggctagggagcccattattcctcgtactgataaaccattc 983 Query: 2028 aagactagcattgtgttttcacttgaagaaggacccggacaactcttcaaggcacttgca 2087 ||||| || | || ||||||||||| ||||| || || || ||||||||||| || Sbjct: 984 aagacgagtgtagtcttttcacttgatgaaggtccgggggtgcttttcaaggcactagct 1043 Query: 2088 gtttttgcactgagggaaatcaacctcaccaagatcgaaagccgtccac 2136 |||||||| || || | || ||||| |||||||| || || ||||||| Sbjct: 1044 gtttttgccatgcggaatattaaccttaccaagattgagagtcgtccac 1092
>ref|XM_533261.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein U (LOC476053), mRNA Length = 3318 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctc 123 ||||||||||||||||||||||||| Sbjct: 787 cctcctcctcttcgtcgtcctcctc 763
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 54103 tactccctccgttcctaaatataag 54079
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 ||||||||||||||||||||||||| Sbjct: 85701 tattactccctccgttcctaaatat 85677
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagt 707 |||||||||||||||||| |||||||||| Sbjct: 2849067 tattactccctccgttccaaaatataagt 2849039 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 675 tgtttattactccctccgttcctaaat 701 ||||||||||||||||| ||||||||| Sbjct: 13881387 tgtttattactccctcctttcctaaat 13881413 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 1144430 tactccctccgtcccaaaatataagtatttttag 1144397 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 1246458 tactccctccgttccaaaatataagcatttttag 1246425 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 6548143 tactccctccgtcccaaaatataagtatttttag 6548176 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||| ||| |||||||||| ||||||| Sbjct: 12549048 tactccctccgctccaaaatataagtatttttag 12549081 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 12908437 tactccctccgttccaaaatataagcatttttag 12908470 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 13668696 tactccctccgttcctaaatat 13668717 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagt 707 |||||||||||| ||||||||||||| Sbjct: 16510315 tactccctccgtccctaaatataagt 16510340 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 1246237 tactccctccgttccaaaatataag 1246261 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatataag 706 |||||||||||||| |||| ||||||||| Sbjct: 2459020 ttattactccctccattccaaaatataag 2458992 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 13394094 tactccctccgtccctaaatataag 13394070 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 14001837 tactccctccgttccaaaatataag 14001861 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 683 actccctccgttcctaaatat 703 ||||||||||||||||||||| Sbjct: 14065653 actccctccgttcctaaatat 14065673 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 16054282 tactccctccgttccaaaatataag 16054306 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||| ||||||||||||||| Sbjct: 20281119 tactccctctgttcctaaatataag 20281143
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 20360119 tactccctccgttcctaaatataag 20360095 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 1247280 attactccctccgttccaaaatataag 1247254 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 1275482 attactccctccgttccaaaatataag 1275508 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttag 715 |||||||||||||||| ||||||||| ||||||| Sbjct: 2204728 ttactccctccgttccaaaatataagcatttttag 2204694 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagt 716 ||||||||||||||| ||||||||| |||||||| Sbjct: 2325589 tactccctccgttccaaaatataagcatttttagt 2325555 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1008 ctaaaaagacttatatttaagaagggagggagtag 1042 ||||||| ||||||||||||| | ||||||||||| Sbjct: 3634889 ctaaaaatacttatatttaaggacggagggagtag 3634923 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataa 705 |||||||||||||||||| |||||||| Sbjct: 4219599 tattactccctccgttccaaaatataa 4219573 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagtcttttt 713 ||||||||||||||| || |||||||||| ||||| Sbjct: 24758742 tattactccctccgtcccaaaatataagtattttt 24758708 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1164 aaaattatgtattatgaaagta 1185 |||||||||||||||||||||| Sbjct: 2426808 aaaattatgtattatgaaagta 2426787 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| | ||||||||||| ||||||| Sbjct: 3634922 tactccctccgtccttaaatataagtatttttag 3634889 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 4276045 tactccctccgtcccaaaatataagtatttttag 4276012 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataag 706 ||||||||||||| |||||||||||| Sbjct: 5468631 ttactccctccgtccctaaatataag 5468606 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 cacctcggctccccttcctccccgcc 76 |||||| ||||||||||||||||||| Sbjct: 8802987 cacctccgctccccttcctccccgcc 8802962 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 24758484 tactccctccgttccaaaatataagcatttttag 24758517 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 906961 tactccctccgtccctaaatataag 906985 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 3387941 tactccctccgttccaaaatataag 3387917 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 4313174 tactccctccgttcctaaata 4313194 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7658792 tactccctccgtccctaaatataag 7658768 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 9042121 tactccctccgttccaaaatataag 9042097 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||| |||||||||||||| Sbjct: 11484292 tactccctccattcctaaatataag 11484268 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||| ||||||||||||||| Sbjct: 20360048 tactccctctgttcctaaatataag 20360072 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 21959563 tattactccctccgtttctaaatat 21959539 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1017 cttatatttaagaagggagggagtagatg 1045 ||||||||| |||| |||||||||||||| Sbjct: 26627590 cttatattttagaatggagggagtagatg 26627562
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 23958314 tactccctccgttcctaaatataag 23958338 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1219 tataagtatctaatttaaatagtttta 1245 ||||||||||| ||||||||||||||| Sbjct: 2266265 tataagtatctgatttaaatagtttta 2266291 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 24018964 attactccctccgttccaaaatataag 24018938 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 3054080 tactccctccgttcctaaatat 3054101 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 cacctcggctccccttcctccccgcc 76 |||||| ||||||||||||||||||| Sbjct: 7398621 cacctccgctccccttcctccccgcc 7398646 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 cacctcggctccccttcctccccgcc 76 |||||| ||||||||||||||||||| Sbjct: 7398834 cacctccgctccccttcctccccgcc 7398859 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 14654294 tactccctccgttccaaaatataagcatttttag 14654327 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 17287446 tactccctccgttcctaaatat 17287467 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataa 705 |||||||||||||||||| ||||||| Sbjct: 22293860 attactccctccgttccttaatataa 22293885 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||| ||||||||||||||| Sbjct: 25191582 cctcctcctcctcgtcgtcctcctcc 25191607 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 26924183 tactccctccgttccagaatataagtatttttag 26924216 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||||||| ||||||| Sbjct: 28383219 ttattactccctccgttcttaaatat 28383244 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 28489063 tactccctccgtcccaaaatataagtatttttag 28489096 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggag 1035 |||| |||||||||||||||||||| Sbjct: 1492814 aaaatacttatatttaagaagggag 1492838 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 5461874 tactccctccgttccaaaatataag 5461850 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 5505337 tactccctccgttccaaaatataag 5505361 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||| |||||||||||||||| Sbjct: 6111289 tactcccttcgttcctaaatataag 6111313 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7434885 tactccctccgtccctaaatataag 7434909 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 17904663 tactccctccgtccctaaatataag 17904687 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatataa 705 |||||||||||||||| |||||||| Sbjct: 19778020 ttactccctccgttccaaaatataa 19778044 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 21487689 tactccctccgtccctaaatataag 21487713 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 24760862 tactccctccgttcctaaata 24760882 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 28730480 tactccctccgtccctaaatataag 28730456
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 10956533 tactccctccgttcctaaatataag 10956557 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttt 713 ||||||||||||||| |||||||||| ||||| Sbjct: 2215779 tactccctccgttccaaaatataagtattttt 2215810 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttag 715 ||||||||||||| || |||||||||| ||||||| Sbjct: 1673468 ttactccctccgtcccaaaatataagtatttttag 1673434 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||||||||||||| || || |||||||||| ||||||| Sbjct: 15408112 tttattactccctctgtcccaaaatataagtatttttag 15408150 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 669 agtgtttgtttattactccctccgttcctaaatat 703 |||||||||| | |||||||||||| ||||||||| Sbjct: 16807433 agtgtttgttaaatactccctccgtccctaaatat 16807399 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||||||||||||||||| |||||||| Sbjct: 31541759 tttattactccctccgtttctaaatat 31541733 Score = 46.1 bits (23), Expect = 0.62 Identities = 23/23 (100%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatat 703 ||||||||||||||||||||||| Sbjct: 34616944 ttactccctccgttcctaaatat 34616966 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatat 703 ||||||||||||||||| |||||||| Sbjct: 713112 ttattactccctccgtttctaaatat 713137 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 674 ttgtttattactccctccgttcctaaatat 703 |||||||||||||| ||||| ||||||||| Sbjct: 2066702 ttgtttattactccatccgtccctaaatat 2066673 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataag 706 |||||||||||||||| ||||||||| Sbjct: 4610444 ttactccctccgttccaaaatataag 4610419 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 7535088 tactccctccgttcctaaatat 7535109 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagt 707 ||||||||||||||| |||||||||| Sbjct: 8202456 tactccctccgttccaaaatataagt 8202481 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 100 ctcctcctcttcgtcgtcctcctccccgtc 129 |||||| || |||||||||||||||||||| Sbjct: 11336884 ctcctcgtcgtcgtcgtcctcctccccgtc 11336855 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatata 704 ||||||||||||||||||| |||||| Sbjct: 12265518 tattactccctccgttccttaatata 12265493 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 18788803 tactccctccgttccaaaatataagcatttttag 18788836 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 674 ttgtttattactccctccgttcctaaatat 703 |||| |||||||||||||||| |||||||| Sbjct: 21919503 ttgtatattactccctccgtttctaaatat 21919532 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 25882550 tactccctccgttcctaaatat 25882571 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagt 707 ||||||||||||||| |||||||||| Sbjct: 33805992 tactccctccgttccaaaatataagt 33805967 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||||| ||||||||| Sbjct: 34493738 ttattactccctccgtccctaaatat 34493713 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 3073760 tactccctccgtccctaaatataag 3073784 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ctcctcctcttcgtcgtcctcctcc 124 ||||||||| ||||||||||||||| Sbjct: 5630467 ctcctcctcctcgtcgtcctcctcc 5630491 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 7581221 tactccctccgttcctaaata 7581201 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 15656247 tactccctccgttccaaaatataag 15656223 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 19069149 tactccctccgtccctaaatataag 19069173 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||| |||||||||||||||||||| Sbjct: 19275771 tacttcctccgttcctaaatataag 19275795 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 20280741 tactccctccgttccaaaatataag 20280765 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 ||||||||||||||| ||||||||| Sbjct: 25882789 tattactccctccgtccctaaatat 25882765 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 27947078 tactccctccgtccctaaatataag 27947102 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 33467621 tattactccctccgtttctaaatat 33467597
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagt 707 |||||||||||||||||| |||||||||| Sbjct: 30099 tattactccctccgttccaaaatataagt 30071
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 50.1 bits (25), Expect = 0.040 Identities = 40/45 (88%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttagtgatttcacta 726 |||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 638 tactccctccgtatctaaatataagtcttttaagatatttcacta 682
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 50.1 bits (25), Expect = 0.040 Identities = 31/33 (93%) Strand = Plus / Plus Query: 671 tgtttgtttattactccctccgttcctaaatat 703 |||| |||||||||||||||||| ||||||||| Sbjct: 37923 tgttagtttattactccctccgtccctaaatat 37955
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 107867 tactccctccgttcctaaatataag 107843 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||| ||||||||||||||| Sbjct: 107796 tactccctctgttcctaaatataag 107820
>gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45 mRNA, complete cds Length = 1018 Score = 50.1 bits (25), Expect = 0.040 Identities = 57/65 (87%), Gaps = 2/65 (3%) Strand = Plus / Minus Query: 925 gactacatacggagcaaaatgagtgaatctacactgtaaagtatgtctatattccatccg 984 |||||||| ||||||||| ||| || ||||||||| |||| |||||||||| | |||||| Sbjct: 956 gactacattcggagcaaa-tgaatgtatctacactctaaaatatgtctata-tacatccg 899 Query: 985 tatgt 989 ||||| Sbjct: 898 tatgt 894
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 162732 tactccctccgttcctaaatataag 162756
>dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028a, complete sequence Length = 60126 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataagtc 708 ||||||||||||||||||| ||||||||| Sbjct: 58539 attactccctccgttcctatatataagtc 58567
>dbj|AP006540.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01C03, TM0559, complete sequence Length = 80535 Score = 50.1 bits (25), Expect = 0.040 Identities = 28/29 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagtc 708 ||||||||||||||||||| ||||||||| Sbjct: 47151 attactccctccgttcctatatataagtc 47123
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 12766 tactccctccgttcctaaatataag 12742 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||| |||||||||||||||||| Sbjct: 12426 tactccatccgttcctaaatataag 12450
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 27422 tactccctccgttcctaaatataag 27398
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 26323 tactccctccgttcctaaatataag 26347 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataag 706 ||||||||||||||||||| |||||| Sbjct: 26675 ttactccctccgttcctaattataag 26650
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 40510 tactccctccgttcctaaatataag 40534 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 40819 tactccctccgttcctaaatataag 40795
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 23587 tactccctccgttcctaaatataag 23611 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 23896 tactccctccgttcctaaatataag 23872
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 44068 tactccctccgttcctaaatataag 44092 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||||||||| |||||| Sbjct: 45970 tactccctccgttcctaattataag 45946
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 37259 tactccctccgttcctaaatataag 37283 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||| ||||||||||||||||| Sbjct: 37568 tactccccccgttcctaaatataag 37544
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 69524 tactccctccgttcctaaatataag 69548 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagt 707 |||||||||||||||||| |||| ||||| Sbjct: 74977 tattactccctccgttccaaaatgtaagt 74949
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 12163 tactccctccgttcctaaatataag 12139
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 50.1 bits (25), Expect = 0.040 Identities = 25/25 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||||||||||||| Sbjct: 30579 tactccctccgttcctaaatataag 30603 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataag 706 |||| |||||||||||||||||| |||||| Sbjct: 30935 tttaatactccctccgttcctaattataag 30906
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 50.1 bits (25), Expect = 0.040 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 939 caaaatgagtgaatctacactgtaaagtatgtctatattccatccgtatgtagtctttta 998 |||||| | |||||||| ||| |||| |||||||||| | ||||||||||||||| || Sbjct: 3849 caaaataaatgaatctatactttaaaatatgtctata-tacatccgtatgtagtccacta 3791 Query: 999 gtggaacctctaaaaagacttatatttaa 1027 || |||||| |||||||||||||||| Sbjct: 3790 atgaaacctccttaaagacttatatttaa 3762 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1011 aaaagacttatatttaagaagggagggagta 1041 |||||||||||||||||||| | |||||||| Sbjct: 3881 aaaagacttatatttaagaatgaagggagta 3911
>gb|AC152350.31| Medicago truncatula clone mth2-72d18, complete sequence Length = 113323 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 673 tttgtttattactccctccgttcctaaatata 704 ||||||||||||| ||||||||||||| |||| Sbjct: 54638 tttgtttattactacctccgttcctaattata 54607
>gb|AC182566.2| Mimulus guttatus clone MGBa-4O8, complete sequence Length = 41484 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 676 gtttattactccctccgttcctaaatat 703 ||||| |||||||||||||||||||||| Sbjct: 13633 gtttactactccctccgttcctaaatat 13660
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatat 703 |||||||||||||||||||||||| Sbjct: 16613 attactccctccgttcctaaatat 16636
>ref|NM_202520.1| Arabidopsis thaliana amino acid binding / prephenate dehydratase (AT3G07630) mRNA, complete cds Length = 1503 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 1013 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1060
>ref|NM_111642.2| Arabidopsis thaliana amino acid binding / prephenate dehydratase (AT3G07630) mRNA, complete cds Length = 1518 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 1018 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1065
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataa 705 |||||||||||||||||||||||| Sbjct: 16869 tactccctccgttcctaaatataa 16846
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagt 707 |||||| ||||||||||||||||||||| Sbjct: 80051 attacttcctccgttcctaaatataagt 80024
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete sequence Length = 79296 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 23316 tactttgactatcttttctatgtggactttgaagcatctatggctgat 23363
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 |||||||||||||||||| ||||||||| Sbjct: 102942 tattactccctccgttccaaaatataag 102969
>gb|AY113967.1| Arabidopsis thaliana putative P-protein (At3g07630) mRNA, complete cds Length = 1177 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 1006 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1053
>gb|AY050813.1| Arabidopsis thaliana putative P-protein: chorismate mutase, prephenate dehydratase (At3g07630) mRNA, complete cds Length = 1514 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 1013 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1060
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataag 706 |||||||||||||||||| ||||||||| Sbjct: 18137 tattactccctccgttccaaaatataag 18110
>ref|XM_806794.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506977.120) partial mRNA Length = 2820 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 100 ctcctcctcttcgtcgtcctcctccccgtcac 131 ||||||||| ||||| |||||||||||||||| Sbjct: 669 ctcctcctcctcgtcctcctcctccccgtcac 638
>gb|AF015957.1| Cercopithecus aethiops Fas-binding protein Daxx mRNA, complete cds Length = 2450 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcct 122 |||||||||||||||||||||||| Sbjct: 1498 cctcctcctcttcgtcgtcctcct 1475
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatat 703 |||||||||||||||||||||||| Sbjct: 23571605 attactccctccgttcctaaatat 23571628 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 27397162 attactccctccgttcccaaatataag 27397136 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataag 706 |||| ||||||||||||||| ||||||||| Sbjct: 6209040 tttaatactccctccgttccaaaatataag 6209069 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 6512518 tactccctccgtcccaaaatataagtatttttag 6512485 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 7005255 tactccctccgtcccaaaatataagtatttttag 7005222 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 9196368 tactccctccgttccaaaatataagcatttttag 9196401 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 10325646 tactccctccgttccaaaatataagcatttttag 10325613 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 14348622 tactccctccgttccaaaatataagcatttttag 14348589 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 16727039 tactccctccgttccaaaatataagcatttttag 16727072 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 17378038 tactccctccgttccaaaatataagcatttttag 17378005 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 24627929 tactccctccgttcctaaatat 24627908 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 28391132 tactccctccgtcccaaaatataagtatttttag 28391165 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 177083 tactccctccgttccaaaatataag 177107 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 1215085 tactccctccgtccctaaatataag 1215109 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 7128846 tattactccctccgtttctaaatat 7128822 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 ttgtttattactccctccgtt 694 ||||||||||||||||||||| Sbjct: 7173420 ttgtttattactccctccgtt 7173440 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7234461 tactccctccgtccctaaatataag 7234437 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 10285635 tactccctccgtccctaaatataag 10285611 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 ||||||||| ||||||||||||||| Sbjct: 10754012 tattactccttccgttcctaaatat 10753988 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 cctcctcctcttcgtcgtcctcctc 123 |||||||||||||||| |||||||| Sbjct: 12269337 cctcctcctcttcgtcctcctcctc 12269361 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 12674685 tactccctccgttccaaaatataag 12674709 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataagt 707 ||||||||||||||| | ||||||||||| Sbjct: 13923312 tattactccctccgtccttaaatataagt 13923340 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 17397971 tactccctccgtccctaaatataag 17397947 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 19065437 tattactccctccgtttctaaatat 19065461 Score = 42.1 bits (21), Expect = 9.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataag 706 |||||||||| |||||||||||||||||| Sbjct: 20050883 ttattactcc-tccgttcctaaatataag 20050910 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataa 705 |||||||||||||||| |||||||| Sbjct: 27282820 ttactccctccgttccaaaatataa 27282796
>emb|AL591036.8| Human DNA sequence from clone RP11-419I4 on chromosome 6 Contains part of the EPHA7 gene for ephrin receptor A7, complete sequence Length = 52253 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 613 tgtttgttgatgaaatgtgttgag 636 |||||||||||||||||||||||| Sbjct: 45991 tgtttgttgatgaaatgtgttgag 46014
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 ||||||||||||| |||||||||||||| Sbjct: 7455 tattactccctccattcctaaatataag 7482
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 ||||||||||||| |||||||||||||| Sbjct: 193382 tattactccctccattcctaaatataag 193409
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 101 tcctcctcttcgtcgtcctcctccccgt 128 ||||||||||| |||||||||||||||| Sbjct: 1029199 tcctcctcttcctcgtcctcctccccgt 1029172
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataa 705 |||||||||||||||||||||||| Sbjct: 89231 tactccctccgttcctaaatataa 89254
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataag 706 |||||||||||||||||||||||| Sbjct: 78047 actccctccgttcctaaatataag 78024 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||| ||||||||||||||| Sbjct: 4998 cctcctcctcgtcgtcgtcctcctcc 5023
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataag 706 |||||||||||||||||||||||| Sbjct: 98996 actccctccgttcctaaatataag 98973
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataa 705 |||||||||||||||||||||||| Sbjct: 19195 tactccctccgttcctaaatataa 19218
>gb|AY084830.1| Arabidopsis thaliana clone 118932 mRNA, complete sequence Length = 1486 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 1018 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1065
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatat 703 |||||||||||||||||||||||| Sbjct: 72807 attactccctccgttcctaaatat 72830
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatata 704 ||||||||||||||||||||| |||||| Sbjct: 4679 tttattactccctccgttccttaatata 4652
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatata 704 ||||||||||||||||||||| |||||| Sbjct: 129634 tttattactccctccgttccttaatata 129607
>gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete sequence Length = 116909 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 675 tgtttattactccctccgttcctaaatataag 706 |||||||||||||||||| ||||| ||||||| Sbjct: 45444 tgtttattactccctccggtcctatatataag 45475
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatata 704 |||||||||||||||||||| ||||||| Sbjct: 152239 tttattactccctccgttccaaaatata 152212
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 ||||||||||||| |||||||||||||| Sbjct: 157362 tattactccctccattcctaaatataag 157389
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataag 706 |||||||||||||||||||||||| Sbjct: 31113 actccctccgttcctaaatataag 31090
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 |||||||| ||||||||||||||||||| Sbjct: 68321 tattactcactccgttcctaaatataag 68348 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 34168 tactccctccgttccaaaatataagcatttttag 34201
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataag 706 |||||||||||||||||||||||| Sbjct: 45785 actccctccgttcctaaatataag 45762
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatat 703 |||||||||||||||||||||||| Sbjct: 52569 attactccctccgttcctaaatat 52592
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttt 713 ||||||||||||||| |||||||||| ||||| Sbjct: 2728 tactccctccgttccaaaatataagtattttt 2759
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtcttttt 713 ||||||||||||||| |||||||||| ||||| Sbjct: 130472 tactccctccgttccaaaatataagtattttt 130503
>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403, complete sequence Length = 97807 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatataa 705 ||||||||||||| |||||||||||||| Sbjct: 65085 ttattactccctctgttcctaaatataa 65058
>emb|BX822781.1|CNS0A64W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1436 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 1003 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1050
>emb|BX823962.1|CNS0A5OT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1406 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 948 tactttgactatcttttctatgtggactttgaagcatctatggctgat 995
>emb|BX822651.1|CNS0A5XJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1353 Score = 48.1 bits (24), Expect = 0.16 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2190 tactttgactacctgttttatgtggaccttgaggcgtctatggctgat 2237 ||||||||||| || || ||||||||| |||| || |||||||||||| Sbjct: 999 tactttgactatcttttctatgtggactttgaagcatctatggctgat 1046
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatataag 706 ||||||| |||||||||||||||||||| Sbjct: 62466 tattacttcctccgttcctaaatataag 62493
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataagt 707 ||||||||||||||| |||||||||||| Sbjct: 73664 attactccctccgtttctaaatataagt 73691
>ref|NM_211877.1| Eremothecium gossypii AGR149Wp (AGR149W), mRNA Length = 2658 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 101 tcctcctcttcgtcgtcctcctccccgt 128 ||||||||||| |||||||||||||||| Sbjct: 209 tcctcctcttcctcgtcctcctccccgt 182
>gb|AF181459.1|AF181459 Hordeum vulgare dehydrin (Dhn9) gene, complete cds Length = 1791 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtct 709 ||||||||||||| |||||||||||||| Sbjct: 1515 tactccctccgttactaaatataagtct 1542
>gb|DQ220740.1| Aegilops sharonensis genomic sequence Length = 3804 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 926 actacatacggagcaaaatgagtgaatc 953 |||| ||||||||||||||||||||||| Sbjct: 2741 actatatacggagcaaaatgagtgaatc 2714
>gb|DQ995508.1| Hordeum vulgare clone 509d02_c-18 genomic sequence Length = 17493 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 939 caaaatgagtgaatctacactgtaaag 965 ||||||||||||||||||||| ||||| Sbjct: 14466 caaaatgagtgaatctacactctaaag 14492 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttttta 714 |||||||| |||| |||||||||||| |||||| Sbjct: 15878 tactcccttcgtttctaaatataagttttttta 15846
>ref|XM_510005.2| PREDICTED: Pan troglodytes similar to FLJ00242 protein (LOC452969), mRNA Length = 5348 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 95 accacctcctcctcttcgtcgtcctcctccc 125 ||||||||||||||||| || |||||||||| Sbjct: 1841 accacctcctcctcttcctcttcctcctccc 1811
>ref|XM_001073417.1| PREDICTED: Rattus norvegicus similar to hypothetical protein (predicted) (RGD1562784_predicted), mRNA Length = 2596 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 592 cctcctcctcctcgtcgtcctcctcctcgtc 562
>ref|XM_219560.4| PREDICTED: Rattus norvegicus similar to hypothetical protein (predicted) (RGD1562784_predicted), mRNA Length = 2594 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 592 cctcctcctcctcgtcgtcctcctcctcgtc 562
>ref|XM_001108826.1| PREDICTED: Macaca mulatta similar to natural killer-tumor recognition sequence isoform a (LOC717392), mRNA Length = 9701 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 5299 cctcctcctcctcgtcgtcctcctcctcgtc 5269
>gb|AC128583.4| Rattus norvegicus BAC CH230-333G5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 164725 Score = 46.1 bits (23), Expect = 0.62 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 cctcctcttcgtcgtcctcctcc 124 ||||||||||||||||||||||| Sbjct: 102621 cctcctcttcgtcgtcctcctcc 102599
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||||||||||||||||| |||||||| Sbjct: 103094 tttattactccctccgtttctaaatat 103068
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 675 tgtttattactccctccgttcctaaat 701 ||||||||||||||||| ||||||||| Sbjct: 50013 tgtttattactccctcctttcctaaat 50039
>ref|XM_617975.2| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 1 (LOC537791), mRNA Length = 3295 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 321 cctcctcctcgtcgtcgtcctcctcctcgtc 291
>ref|XM_875665.1| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 2 (LOC537791), mRNA Length = 4617 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 301 cctcctcctcgtcgtcgtcctcctcctcgtc 271
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1219 tataagtatctaatttaaatagtttta 1245 ||||||||||| ||||||||||||||| Sbjct: 98696 tataagtatctgatttaaatagtttta 98722
>gb|AC164610.3| Mus musculus BAC clone RP23-422D16 from chromosome 6, complete sequence Length = 200529 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 122207 cctcctcctcctcgtcgtcctcctcctcgtc 122177
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||| ||||||||||||||| ||||||| || ||||||| Sbjct: 10403 tttagtactccctccgttccaaaatataggtatttttag 10441
>gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full insert mRNA sequence Length = 2748 Score = 46.1 bits (23), Expect = 0.62 Identities = 23/23 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatataa 705 ||||||||||||||||||||||| Sbjct: 2425 actccctccgttcctaaatataa 2403
>dbj|AB169347.1| Macaca fascicularis testis cDNA, clone: QtsA-19171, similar to human hypothetical protein KIAA1190 (KIAA1190), mRNA, RefSeq: NM_145166.2 Length = 2472 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||| ||||||||||||||| |||| Sbjct: 216 cctcctcctcctcgtcgtcctcctcctcgtc 186
>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3, complete sequence Length = 145085 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 |||||||||||||||| |||||||||| Sbjct: 112119 attactccctccgttcttaaatataag 112145 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1017 cttatatttaagaagggagggagta 1041 |||||||||||||| |||||||||| Sbjct: 112145 cttatatttaagaacggagggagta 112121 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||| |||||||||||||||||| Sbjct: 112269 tactccatccgttcctaaatataag 112245
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 |||||||||||||||| ||||| |||||||| Sbjct: 29320 cctcctcctcttcgtcctcctcgtccccgtc 29290 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctc 123 |||||||||||||||| |||||||| Sbjct: 29335 cctcctcctcttcgtcctcctcctc 29311
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 676 gtttattactccctccgttcctaaatataag 706 |||||||||||||||| |||| ||||||||| Sbjct: 5868500 gtttattactccctccattccaaaatataag 5868470 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataagtcttttt 713 |||||||||||||| || |||||||||| ||||| Sbjct: 6339713 attactccctccgtcccaaaatataagtattttt 6339680 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 7112560 tactccctccgttcctaaatat 7112581 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 7173664 tactccctccgtcccaaaatataagtatttttag 7173631 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||| ||||||||||||||| Sbjct: 8913736 cctcctcctcctcgtcgtcctcctcc 8913711 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||| ||||||||||| Sbjct: 16217842 ttattactccctcctttcctaaatat 16217867 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 19146363 tactccctccgttcctaaatat 19146384 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 22083713 tactccctccgttcctaaatat 22083692 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 ||||||||||||||||| |||||||| Sbjct: 22670358 ttattactccctccgtttctaaatat 22670333 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataag 706 |||| |||||||||||| |||||||||||| Sbjct: 23326755 tttagtactccctccgtccctaaatataag 23326784 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 cacctcggctccccttcctccccgcc 76 |||||| ||||||||||||||||||| Sbjct: 26639081 cacctccgctccccttcctccccgcc 26639056 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 3816554 tactccctccgttcctaaata 3816534 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 19971775 tactccctccgttcccaaatataag 19971799 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 23051641 tactccctccgttccaaaatataag 23051665 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataa 705 |||| ||||||||||||||| |||||||| Sbjct: 23069755 tttactactccctccgttccaaaatataa 23069783 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 675 tgtttattactccctccgttcctaaatat 703 |||||| ||||||||||||| |||||||| Sbjct: 23224696 tgtttagtactccctccgtttctaaatat 23224724 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 24545121 tactccctccgtccctaaatataag 24545097 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 cacctcctcctcttcgtcgtcctcctccc 125 |||||||||||| |||||| ||||||||| Sbjct: 24957285 cacctcctcctcctcgtcgccctcctccc 24957257 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 683 actccctccgttcctaaatat 703 ||||||||||||||||||||| Sbjct: 27210870 actccctccgttcctaaatat 27210850
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 4404561 attactccctccgttccaaaatataag 4404587 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 acacctcggctccccttcctccccgcc 76 ||||||| ||||||||||||||||||| Sbjct: 8835990 acacctccgctccccttcctccccgcc 8835964 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 ||||||||||||| |||||||||||| Sbjct: 1493058 cctcctcctcttcctcgtcctcctcc 1493033 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatat 703 |||||||||||||||||||||| Sbjct: 8468755 tactccctccgttcctaaatat 8468734 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 cacctcggctccccttcctccccgcc 76 |||||| ||||||||||||||||||| Sbjct: 8836125 cacctccgctccccttcctccccgcc 8836100 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataag 706 ||||||||||||||| |||| ||||||||| Sbjct: 11030519 tttattactccctccattccaaaatataag 11030490 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||| ||||||||||||||| Sbjct: 14032783 cctcctcctcctcgtcgtcctcctcc 14032758 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctcc 124 |||||||||| ||||||||||||||| Sbjct: 14905780 cctcctcctcctcgtcgtcctcctcc 14905755 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaa 700 |||||||||||||||||||||| Sbjct: 16067764 tattactccctccgttcctaaa 16067743 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||| || |||||||||| ||||||| Sbjct: 17590325 tactccctccgtcccaaaatataagtatttttag 17590358 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 ||||||||||||||||| |||||||| Sbjct: 18370296 ttattactccctccgtttctaaatat 18370271 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 679 tattactccctccgttcctaaatata 704 |||||||||||||||| ||||||||| Sbjct: 21100056 tattactccctccgtttctaaatata 21100081 Score = 44.1 bits (22), Expect = 2.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2101 gggaaatcaacctcaccaagatcgaaagccgtccacac 2138 |||| |||| ||||||||||||||| ||||| |||||| Sbjct: 22241893 gggacatcagcctcaccaagatcgagagccgcccacac 22241930 Score = 44.1 bits (22), Expect = 2.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2101 gggaaatcaacctcaccaagatcgaaagccgtccacac 2138 |||| |||| ||||||||||||||| ||||| |||||| Sbjct: 22263598 gggacatcagcctcaccaagatcgagagccgcccacac 22263635 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatataag 706 |||||||||||||| || |||||||||||| Sbjct: 22382163 tttattactccctctgtccctaaatataag 22382134 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 4480684 tactccctccgtccctaaatataag 4480660 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 6891866 tactccctccgtccctaaatataag 6891842 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7283130 tactccctccgtccctaaatataag 7283154 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7283253 tactccctccgtccctaaatataag 7283229 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 7357560 tactccctccgtccctaaatataag 7357536 Score = 42.1 bits (21), Expect = 9.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaata 702 ||||||||||||||||||||| Sbjct: 9891794 tactccctccgttcctaaata 9891774 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ctcctcctcttcgtcgtcctcctcc 124 ||||||||| ||||||||||||||| Sbjct: 11932257 ctcctcctcgtcgtcgtcctcctcc 11932281 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 ||||||||||||||| ||||||||| Sbjct: 12644794 tactccctccgttccaaaatataag 12644818 Score = 42.1 bits (21), Expect = 9.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 678 ttattactccctccgttcctaaatataag 706 |||||||||||||| |||| ||||||||| Sbjct: 15243103 ttattactccctccattccaaaatataag 15243131 Score = 42.1 bits (21), Expect = 9.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtcttttta 714 |||||||||||| || |||||||||| |||||| Sbjct: 15620107 tactccctccgtcccaaaatataagtattttta 15620075 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 17356966 tactccctccgtccctaaatataag 17356990 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||| |||||||||||| Sbjct: 17357078 tactccctccgtccctaaatataag 17357054 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatat 703 |||||||||||||||| |||||||| Sbjct: 21842689 tattactccctccgtttctaaatat 21842665
>emb|AL034346.31|HS668J24 Human DNA sequence from clone RP4-668J24 on chromosome 6p25.1-25.3 Contians the FOXF2 gene for forkhead box F2, complete sequence Length = 120429 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 94 gaccacctcctcctcttcgtcgtcctcctcc 124 ||||||||||||||| |||||||| |||||| Sbjct: 33554 gaccacctcctcctcctcgtcgtcgtcctcc 33584
>emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on chromosome 11 Contains the gene for a novel protein simialr to cell division cycle associated 4 Cdca4, a ribosomal protein L15 (Rpl15) pseudogene, the 3' end of a novel gene and two CpG islands, complete sequence Length = 183089 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 99 cctcctcctcttcgtcgtcctcctccccgtc 129 ||||||||||||| || |||||||||||||| Sbjct: 52136 cctcctcctcttcttcctcctcctccccgtc 52106
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1008 ctaaaaagacttatatttaagaagggagggagtag 1042 ||||||| |||||||||| |||| ||||||||||| Sbjct: 84406 ctaaaaatacttatattttagaacggagggagtag 84372 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 |||||||||||||| |||||||||| ||||||| Sbjct: 84373 tactccctccgttctaaaatataagtatttttag 84406
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataagtcttttt 713 ||||||||||||||| || |||||||||| ||||| Sbjct: 59543 tattactccctccgtcccaaaatataagtattttt 59509 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataagtctttttag 715 ||||||||||||||| ||||||||| ||||||| Sbjct: 59285 tactccctccgttccaaaatataagcatttttag 59318
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttag 715 |||||||||||||||| ||||||||| ||||||| Sbjct: 82990 ttactccctccgttccaaaatataagcatttttag 82956
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073J19 Length = 165174 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 76587 attactccctccgttccaaaatataag 76561 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 104789 attactccctccgttccaaaatataag 104815
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1590_E05 Length = 148205 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 679 tattactccctccgttcctaaatataa 705 |||||||||||||||||| |||||||| Sbjct: 119222 tattactccctccgttccaaaatataa 119196
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Minus Query: 674 ttgtttattactccctccgttcctaaatata 704 |||| ||||||||||||||||||| |||||| Sbjct: 131803 ttgtgtattactccctccgttccttaatata 131773
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttag 715 ||||||||||||| || |||||||||| ||||||| Sbjct: 110571 ttactccctccgtcccaaaatataagtatttttag 110537
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 674 ttgtttattactccctccgttcctaaatata 704 ||||||||||||| ||||||||| ||||||| Sbjct: 110871 ttgtttattactcactccgttccaaaatata 110901
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 |||||||||||||| |||||||||||| Sbjct: 129401 attactccctccgtccctaaatataag 129375 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||| |||||||||||||||||||| Sbjct: 129287 tacttcctccgttcctaaatataag 129311
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 |||||||||||||| |||||||||||| Sbjct: 44844 attactccctccgtccctaaatataag 44818 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 682 tactccctccgttcctaaatataag 706 |||| |||||||||||||||||||| Sbjct: 44730 tacttcctccgttcctaaatataag 44754
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 107379 attactccctccgttccaaaatataag 107405
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 16231 attactccctccgttcccaaatataag 16205
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 139989 attactccctccgttcccaaatataag 139963 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataa 705 |||||||||||||||| |||||||| Sbjct: 25647 ttactccctccgttccaaaatataa 25623
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036H07 Length = 149797 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 669 agtgtttgtttattactccctccgttcctaaatat 703 |||||||||| | |||||||||||| ||||||||| Sbjct: 8490 agtgtttgttaaatactccctccgtccctaaatat 8456
>dbj|AP005765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0023G13 Length = 144694 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 acacctcggctccccttcctccccgcc 76 ||||||| ||||||||||||||||||| Sbjct: 104361 acacctccgctccccttcctccccgcc 104335 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 cacctcggctccccttcctccccgcc 76 |||||| ||||||||||||||||||| Sbjct: 104496 cacctccgctccccttcctccccgcc 104471
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 46.1 bits (23), Expect = 0.62 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1017 cttatatttaagaagggagggagtagatgca 1047 |||||||||||||| |||||||||| ||||| Sbjct: 64644 cttatatttaagaacggagggagtacatgca 64674 Score = 42.1 bits (21), Expect = 9.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataag 706 |||||||||||||| |||||||||| Sbjct: 64668 tactccctccgttcttaaatataag 64644
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||| |||||||||||||||||||||| Sbjct: 56157 tttagtactccctccgttcctaaatat 56131
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Plus Query: 680 attactccctccgttcctaaatataag 706 ||||||||||||||||| ||||||||| Sbjct: 6437 attactccctccgttccaaaatataag 6463
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||| |||||||||||||||||||||| Sbjct: 110753 tttagtactccctccgttcctaaatat 110727
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 669 agtgtttgtttattactccctccgttcctaaatat 703 |||||||||| | |||||||||||| ||||||||| Sbjct: 55675 agtgtttgttaaatactccctccgtccctaaatat 55641
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 46.1 bits (23), Expect = 0.62 Identities = 35/39 (89%) Strand = Plus / Plus Query: 677 tttattactccctccgttcctaaatataagtctttttag 715 |||||||||||||| || || |||||||||| ||||||| Sbjct: 78894 tttattactccctctgtcccaaaatataagtatttttag 78932
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 46.1 bits (23), Expect = 0.62 Identities = 23/23 (100%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatat 703 ||||||||||||||||||||||| Sbjct: 127884 ttactccctccgttcctaaatat 127906 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 678 ttattactccctccgttcctaaatat 703 |||||||||||||||| ||||||||| Sbjct: 4678 ttattactccctccgtccctaaatat 4653
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 46.1 bits (23), Expect = 0.62 Identities = 23/23 (100%) Strand = Plus / Plus Query: 681 ttactccctccgttcctaaatat 703 ||||||||||||||||||||||| Sbjct: 83559 ttactccctccgttcctaaatat 83581
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagt 716 ||||||||||||||| ||||||||| |||||||| Sbjct: 1559 tactccctccgttccaaaatataagcatttttagt 1525 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1164 aaaattatgtattatgaaagta 1185 |||||||||||||||||||||| Sbjct: 102778 aaaattatgtattatgaaagta 102757
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 46.1 bits (23), Expect = 0.62 Identities = 26/27 (96%) Strand = Plus / Minus Query: 677 tttattactccctccgttcctaaatat 703 |||||||||||||||||| |||||||| Sbjct: 32319 tttattactccctccgtttctaaatat 32293
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 682 tactccctccgttcctaaatataagtctttttagt 716 ||||||||||||||| ||||||||| |||||||| Sbjct: 73088 tactccctccgttccaaaatataagcatttttagt 73054
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 46.1 bits (23), Expect = 0.62 Identities = 32/35 (91%) Strand = Plus / Minus Query: 681 ttactccctccgttcctaaatataagtctttttag 715 |||||||||||||||| ||||||||| ||||||| Sbjct: 2855 ttactccctccgttccaaaatataagcatttttag 2821 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 475,920,504 Number of extensions: 26154532 Number of successful extensions: 189112 Number of sequences better than 10.0: 1026 Number of HSP's gapped: 189033 Number of HSP's successfully gapped: 1720 Length of query: 2547 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2524 Effective length of database: 18,503,978,556 Effective search space: 46704041875344 Effective search space used: 46704041875344 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
