ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38n09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108056:Os06g0506000 230 1e-60
2AK072028:Os02g0264300 202 4e-52
3Os01g0224200:Os01g0224200 112 4e-25
4AK109247:Os06g0505900 44 3e-04
5AK110134: 31 1.7
6Os08g0238500:Os08g0238500 29 4.9
7AK065570:Os04g0191600 29 4.9
8Os01g0772700:Os01g0772700 29 6.5
9AK106865:Os05g0204600 29 6.5
10AK109869:Os04g0283800 28 8.4
11AK109678:Os03g0178500 28 8.4

>AK108056:Os06g0506000 |
          Length = 263
 Score =  230 bits (586), Expect = 1e-60
 Identities = 142/254 (55%), Positives = 156/254 (61%), Gaps = 4/254 (1%)
 Frame = +2

Query: 104 LQERIWDLHDKLSHAILALSACAGLPACLCRGAPNGHVVVKGQRPPQGGGHVDLXXXXXX 283
           LQERIWDLHD LSHAIL+LSA A    C  R AP G VVVKG R   G G   L      
Sbjct: 13  LQERIWDLHDNLSHAILSLSASAH--RCCRRRAPEGRVVVKGWRRQGGCGDCGLEQEAAA 70

Query: 284 XXXX---RGLHAIRAALEDLEGHLHFXXXXXXXXXXXXXXXXXXXXXSRILLAARLAEHR 454
                  R LHA+RAALEDLEGHLHF                     SRILLA RLAEHR
Sbjct: 71  AATMADARSLHAVRAALEDLEGHLHFLHNIQLCQVAERDAAIARLQQSRILLATRLAEHR 130

Query: 455 GKGHGIIEEALGFVGDVRDKSHFVSPEDVYGMHSQLGEDEED-RRGHGSNMVVRVVSCSF 631
            K H +IEEAL FV D  DKS FVSPEDV G H+     E    + H SN +VR +SC+ 
Sbjct: 131 WKKHEVIEEALAFVDDALDKSRFVSPEDVRGTHTHSQSVENQCPKIHDSNFLVRFLSCTL 190

Query: 632 ALAKNILRFERMGSVLGNATVFAVSMLTFLQLHQLASGKQTPAVQYRRTDNGSLSGGSRK 811
           A+AKN LRFER+G  LGN  +FAVSML FLQL Q+A GKQTPAVQ RR  N   S  S K
Sbjct: 191 AIAKNSLRFERIGGALGNTAMFAVSMLAFLQLQQVAFGKQTPAVQCRRV-NYFHSQMSVK 249

Query: 812 DSKGKHLEVLLARG 853
           ++K KHL VLLARG
Sbjct: 250 NTKEKHLVVLLARG 263



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>AK072028:Os02g0264300 |
          Length = 283

 Score =  202 bits (513), Expect = 4e-52
 Identities = 128/291 (43%), Positives = 158/291 (54%), Gaps = 25/291 (8%)
 Frame = +2

Query: 56  MRWDWXXXXXXXXXXXLQERIWDLHDKLSHAILALSACAGL---------------PACL 190
           MRWD            + ERIWDLHD+LS AILA+S    L                A  
Sbjct: 1   MRWD------AAEAEEVLERIWDLHDRLSDAILAVSRAHFLLPPPPPPPPPPPSQPSAPP 54

Query: 191 CRGAPNGHVVVKGQRPPQGGGHVDLXXXXXXXXXX----------RGLHAIRAALEDLEG 340
            R   NG+V VKG +   GGG   +                    R LHAIR ALEDLE 
Sbjct: 55  AREGRNGYVFVKGLKGGGGGGGGGVGDGVGVGSAKAAAAEAMAEARSLHAIRTALEDLEE 114

Query: 341 HLHFXXXXXXXXXXXXXXXXXXXXXSRILLAARLAEHRGKGHGIIEEALGFVGDVRDKSH 520
           HL F                     SR++LA RLAEH+GK + +I+EAL FVG+V DKS 
Sbjct: 115 HLEFLHTVQSQQRAEQDAAIARLEQSRLVLAMRLAEHQGKKYRVIDEALAFVGEVGDKSR 174

Query: 521 FVSPEDVYGMHSQLGEDEEDRRGHGSNMVVRVVSCSFALAKNILRFERMGSVLGNATVFA 700
           F+SPEDV   H+Q GED  D   +GS+++  V+SCS +LAKN  R +++GS LGNA  FA
Sbjct: 175 FISPEDVRATHNQSGEDVMDSGSNGSSIMGNVLSCSLSLAKNSFRVDKIGSALGNAAAFA 234

Query: 701 VSMLTFLQLHQLASGKQTPAVQYRRTDNGSLSGGSRKDSKGKHLEVLLARG 853
           VSM  FLQLHQ+A G ++PA+ YRR  +   SG S +  KGK LEV LARG
Sbjct: 235 VSMFAFLQLHQVAFGSKSPAMDYRR--HSYHSGSSLQSGKGKQLEVYLARG 283



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>Os01g0224200:Os01g0224200 |
          Length = 255

 Score =  112 bits (280), Expect = 4e-25
 Identities = 92/253 (36%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
 Frame = +2

Query: 110 ERIWDLHDKLSHAILALSACAGLPACLCRGAP-NGHVVVKGQRPPQGGGHVDLXXXXXXX 286
           E IWDLHDK+S AI ALS    L A      P  G V VKG      G   +        
Sbjct: 11  ETIWDLHDKVSDAIHALSRAHFLRAVRRHSKPAEGLVRVKGG----DGVDDEAAALDAVA 66

Query: 287 XXXRGLHAIRAALEDLEGHLHFXXXXXXXXXXXXXXXXXXXXXSRILLAARLAEHRGKGH 466
              R LHAIRAALEDLE                          SRI+LA RL  HRG   
Sbjct: 67  EEARSLHAIRAALEDLEDQFECFLAVQSQQQAERDISLARLEQSRIMLAIRLNGHRGVNK 126

Query: 467 GIIEEALGFVGDVRDKSHFVSPEDVYGMHSQLGEDEEDRRGHGSNMVVRVVSCSFALAKN 646
            II+EAL FV   R+  H V P       ++LG          +N + ++V+ S ALA+N
Sbjct: 127 KIIDEALDFV---RNVCHGVWPSLSINKPAKLGS-HSGADSKNANFLGQMVASSVALARN 182

Query: 647 ILRFERMGSVLGNATVFAVSMLTFLQLHQLASGKQTPAV---QYRRTDNGSLSG-GSRKD 814
               + +G +LG+  V A+ M+T LQLH L+SG+Q+P+     Y+     S S   +  D
Sbjct: 183 SFSIKTLGGLLGHTGVLAIGMITLLQLHWLSSGQQSPSTCRYSYKMISQESSSQFETAMD 242

Query: 815 SKGKHLEVLLARG 853
           ++   L+V LARG
Sbjct: 243 TRISDLDVFLARG 255



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>AK109247:Os06g0505900 |
          Length = 149

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = -1

Query: 349 VEVALEVLERGADGVQAP---XXXXXXXXXRQVDVPSTLRRPLPLDDYVP 209
           +EVALEVLERGADGV+AP             Q  VP++   P PLDD+ P
Sbjct: 1   MEVALEVLERGADGVKAPRVRHGGRRSRLLLQAAVPTSSLPPPPLDDHAP 50



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>AK110134: |
          Length = 944

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = -3

Query: 614 HAPPYLNHVPCGPPHLPLIGCAFH---THLPAR---QNGSCHAHHPRNLRLPQ*FH 465
           H+  Y +H P  P        A H   + +P+    QN   H HHP+N ++P   H
Sbjct: 149 HSSAYTSHSPYAPSQSHAPDAAMHPQRSSMPSHYDYQNNYPHPHHPQNPQMPPQHH 204



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>Os08g0238500:Os08g0238500 |
          Length = 279

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +2

Query: 443 AEHRGKGHGIIEEALGF----VGDVRDKSHFVSPEDVYGMHSQLGEDEEDRRGHGSNMVV 610
           A+  G+   +I++  GF     GDV      +   D+YG  + L  D  D+ G     VV
Sbjct: 45  ADGDGEAGVVIDDLAGFPAYVTGDVHSGRAIILASDIYGFEAPLLRDNADKVGEAGYYVV 104



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>AK065570:Os04g0191600 |
          Length = 334

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -2

Query: 636 KAKLQDTTRTTIFEPCPLRSSSSSPNWLCIPYTSSGETKWLLSRTSPTKPKASSMIP 466
           + + QD+ R +       RSSSS  +W   P   S    W  +  + + P A+S  P
Sbjct: 11  RRRRQDSRRRSAPASPSRRSSSSGTSWYGFPPNPSSAAAWCAAHGAASPPPATSSSP 67



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>Os01g0772700:Os01g0772700 |
          Length = 1450

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = -1

Query: 616 HTHHHI*TMSPAVLLIFP*LA-----VHSIHIFRRDKMALVTHITHET*GFLNDSMPLSS 452
           H  H++  + P+ +L+   LA     +HS H   ++  A V+ ++ +T G  +D   LSS
Sbjct: 564 HRLHNV--LGPSWVLVLETLAALDRAIHSPHASTQEVSASVSRLSRDTSGQYSDFHILSS 621

Query: 451 MFSQP 437
           + SQP
Sbjct: 622 LNSQP 626



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>AK106865:Os05g0204600 |
          Length = 378

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -2

Query: 516 LLSRTSPTKPKASSMIPCPFPLCSANLAARRMRLCCTLAIAASRSARCC 370
           LL R+SPT     + +     L +A LA  RM+L C+   AA  S  CC
Sbjct: 13  LLLRSSPTTTGGGARV-----LAAAELA--RMKLLCSACEAAEASVLCC 54



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>AK109869:Os04g0283800 |
          Length = 427

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 714 VSILTANTVALPSTLPILSNLKMFLAKAKLQDTTRTTIFEPCPLRSSSSSP 562
           VS+L  +   + S+ P    +++FL  A     T +T     PLR S+SSP
Sbjct: 255 VSLLFFHEAVMASSKPKQGRIRVFLFAAHDAPATSSTSPTAAPLRRSASSP 305



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>AK109678:Os03g0178500 |
          Length = 330

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 675 TLPILSNLKMFLAKAKLQDTTRTTIFEPCPLRSSSSSPNWLCIPYTSSGETKWLLSRTSP 496
           +L  L+ L++     +L  T  TT+   CP   S+  P  L + +   G++KW  +R  P
Sbjct: 44  SLHFLARLRIRPVHLRLPGTDATTVRVWCPAAPSAKPP--LLLLHGFGGDSKWTWARNLP 101


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 28,503,760
Number of extensions: 669402
Number of successful extensions: 2092
Number of sequences better than 10.0: 11
Number of HSP's gapped: 2074
Number of HSP's successfully gapped: 11
Length of query: 355
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 253
Effective length of database: 11,315,673
Effective search space: 2862865269
Effective search space used: 2862865269
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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