| Clone Name | FLbaf38n09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK108056:Os06g0506000 | 230 | 1e-60 | 2 | AK072028:Os02g0264300 | 202 | 4e-52 | 3 | Os01g0224200:Os01g0224200 | 112 | 4e-25 | 4 | AK109247:Os06g0505900 | 44 | 3e-04 | 5 | AK110134: | 31 | 1.7 | 6 | Os08g0238500:Os08g0238500 | 29 | 4.9 | 7 | AK065570:Os04g0191600 | 29 | 4.9 | 8 | Os01g0772700:Os01g0772700 | 29 | 6.5 | 9 | AK106865:Os05g0204600 | 29 | 6.5 | 10 | AK109869:Os04g0283800 | 28 | 8.4 | 11 | AK109678:Os03g0178500 | 28 | 8.4 |
|---|
>AK108056:Os06g0506000 | Length = 263 Score = 230 bits (586), Expect = 1e-60 Identities = 142/254 (55%), Positives = 156/254 (61%), Gaps = 4/254 (1%) Frame = +2 Query: 104 LQERIWDLHDKLSHAILALSACAGLPACLCRGAPNGHVVVKGQRPPQGGGHVDLXXXXXX 283 LQERIWDLHD LSHAIL+LSA A C R AP G VVVKG R G G L Sbjct: 13 LQERIWDLHDNLSHAILSLSASAH--RCCRRRAPEGRVVVKGWRRQGGCGDCGLEQEAAA 70 Query: 284 XXXX---RGLHAIRAALEDLEGHLHFXXXXXXXXXXXXXXXXXXXXXSRILLAARLAEHR 454 R LHA+RAALEDLEGHLHF SRILLA RLAEHR Sbjct: 71 AATMADARSLHAVRAALEDLEGHLHFLHNIQLCQVAERDAAIARLQQSRILLATRLAEHR 130 Query: 455 GKGHGIIEEALGFVGDVRDKSHFVSPEDVYGMHSQLGEDEED-RRGHGSNMVVRVVSCSF 631 K H +IEEAL FV D DKS FVSPEDV G H+ E + H SN +VR +SC+ Sbjct: 131 WKKHEVIEEALAFVDDALDKSRFVSPEDVRGTHTHSQSVENQCPKIHDSNFLVRFLSCTL 190 Query: 632 ALAKNILRFERMGSVLGNATVFAVSMLTFLQLHQLASGKQTPAVQYRRTDNGSLSGGSRK 811 A+AKN LRFER+G LGN +FAVSML FLQL Q+A GKQTPAVQ RR N S S K Sbjct: 191 AIAKNSLRFERIGGALGNTAMFAVSMLAFLQLQQVAFGKQTPAVQCRRV-NYFHSQMSVK 249 Query: 812 DSKGKHLEVLLARG 853 ++K KHL VLLARG Sbjct: 250 NTKEKHLVVLLARG 263
>AK072028:Os02g0264300 | Length = 283 Score = 202 bits (513), Expect = 4e-52 Identities = 128/291 (43%), Positives = 158/291 (54%), Gaps = 25/291 (8%) Frame = +2 Query: 56 MRWDWXXXXXXXXXXXLQERIWDLHDKLSHAILALSACAGL---------------PACL 190 MRWD + ERIWDLHD+LS AILA+S L A Sbjct: 1 MRWD------AAEAEEVLERIWDLHDRLSDAILAVSRAHFLLPPPPPPPPPPPSQPSAPP 54 Query: 191 CRGAPNGHVVVKGQRPPQGGGHVDLXXXXXXXXXX----------RGLHAIRAALEDLEG 340 R NG+V VKG + GGG + R LHAIR ALEDLE Sbjct: 55 AREGRNGYVFVKGLKGGGGGGGGGVGDGVGVGSAKAAAAEAMAEARSLHAIRTALEDLEE 114 Query: 341 HLHFXXXXXXXXXXXXXXXXXXXXXSRILLAARLAEHRGKGHGIIEEALGFVGDVRDKSH 520 HL F SR++LA RLAEH+GK + +I+EAL FVG+V DKS Sbjct: 115 HLEFLHTVQSQQRAEQDAAIARLEQSRLVLAMRLAEHQGKKYRVIDEALAFVGEVGDKSR 174 Query: 521 FVSPEDVYGMHSQLGEDEEDRRGHGSNMVVRVVSCSFALAKNILRFERMGSVLGNATVFA 700 F+SPEDV H+Q GED D +GS+++ V+SCS +LAKN R +++GS LGNA FA Sbjct: 175 FISPEDVRATHNQSGEDVMDSGSNGSSIMGNVLSCSLSLAKNSFRVDKIGSALGNAAAFA 234 Query: 701 VSMLTFLQLHQLASGKQTPAVQYRRTDNGSLSGGSRKDSKGKHLEVLLARG 853 VSM FLQLHQ+A G ++PA+ YRR + SG S + KGK LEV LARG Sbjct: 235 VSMFAFLQLHQVAFGSKSPAMDYRR--HSYHSGSSLQSGKGKQLEVYLARG 283
>Os01g0224200:Os01g0224200 | Length = 255 Score = 112 bits (280), Expect = 4e-25 Identities = 92/253 (36%), Positives = 120/253 (47%), Gaps = 5/253 (1%) Frame = +2 Query: 110 ERIWDLHDKLSHAILALSACAGLPACLCRGAP-NGHVVVKGQRPPQGGGHVDLXXXXXXX 286 E IWDLHDK+S AI ALS L A P G V VKG G + Sbjct: 11 ETIWDLHDKVSDAIHALSRAHFLRAVRRHSKPAEGLVRVKGG----DGVDDEAAALDAVA 66 Query: 287 XXXRGLHAIRAALEDLEGHLHFXXXXXXXXXXXXXXXXXXXXXSRILLAARLAEHRGKGH 466 R LHAIRAALEDLE SRI+LA RL HRG Sbjct: 67 EEARSLHAIRAALEDLEDQFECFLAVQSQQQAERDISLARLEQSRIMLAIRLNGHRGVNK 126 Query: 467 GIIEEALGFVGDVRDKSHFVSPEDVYGMHSQLGEDEEDRRGHGSNMVVRVVSCSFALAKN 646 II+EAL FV R+ H V P ++LG +N + ++V+ S ALA+N Sbjct: 127 KIIDEALDFV---RNVCHGVWPSLSINKPAKLGS-HSGADSKNANFLGQMVASSVALARN 182 Query: 647 ILRFERMGSVLGNATVFAVSMLTFLQLHQLASGKQTPAV---QYRRTDNGSLSG-GSRKD 814 + +G +LG+ V A+ M+T LQLH L+SG+Q+P+ Y+ S S + D Sbjct: 183 SFSIKTLGGLLGHTGVLAIGMITLLQLHWLSSGQQSPSTCRYSYKMISQESSSQFETAMD 242 Query: 815 SKGKHLEVLLARG 853 ++ L+V LARG Sbjct: 243 TRISDLDVFLARG 255
>AK109247:Os06g0505900 | Length = 149 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Frame = -1 Query: 349 VEVALEVLERGADGVQAP---XXXXXXXXXRQVDVPSTLRRPLPLDDYVP 209 +EVALEVLERGADGV+AP Q VP++ P PLDD+ P Sbjct: 1 MEVALEVLERGADGVKAPRVRHGGRRSRLLLQAAVPTSSLPPPPLDDHAP 50
>AK110134: | Length = 944 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Frame = -3 Query: 614 HAPPYLNHVPCGPPHLPLIGCAFH---THLPAR---QNGSCHAHHPRNLRLPQ*FH 465 H+ Y +H P P A H + +P+ QN H HHP+N ++P H Sbjct: 149 HSSAYTSHSPYAPSQSHAPDAAMHPQRSSMPSHYDYQNNYPHPHHPQNPQMPPQHH 204
>Os08g0238500:Os08g0238500 | Length = 279 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +2 Query: 443 AEHRGKGHGIIEEALGF----VGDVRDKSHFVSPEDVYGMHSQLGEDEEDRRGHGSNMVV 610 A+ G+ +I++ GF GDV + D+YG + L D D+ G VV Sbjct: 45 ADGDGEAGVVIDDLAGFPAYVTGDVHSGRAIILASDIYGFEAPLLRDNADKVGEAGYYVV 104
>AK065570:Os04g0191600 | Length = 334 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -2 Query: 636 KAKLQDTTRTTIFEPCPLRSSSSSPNWLCIPYTSSGETKWLLSRTSPTKPKASSMIP 466 + + QD+ R + RSSSS +W P S W + + + P A+S P Sbjct: 11 RRRRQDSRRRSAPASPSRRSSSSGTSWYGFPPNPSSAAAWCAAHGAASPPPATSSSP 67
>Os01g0772700:Os01g0772700 | Length = 1450 Score = 28.9 bits (63), Expect = 6.5 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Frame = -1 Query: 616 HTHHHI*TMSPAVLLIFP*LA-----VHSIHIFRRDKMALVTHITHET*GFLNDSMPLSS 452 H H++ + P+ +L+ LA +HS H ++ A V+ ++ +T G +D LSS Sbjct: 564 HRLHNV--LGPSWVLVLETLAALDRAIHSPHASTQEVSASVSRLSRDTSGQYSDFHILSS 621 Query: 451 MFSQP 437 + SQP Sbjct: 622 LNSQP 626
>AK106865:Os05g0204600 | Length = 378 Score = 28.9 bits (63), Expect = 6.5 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = -2 Query: 516 LLSRTSPTKPKASSMIPCPFPLCSANLAARRMRLCCTLAIAASRSARCC 370 LL R+SPT + + L +A LA RM+L C+ AA S CC Sbjct: 13 LLLRSSPTTTGGGARV-----LAAAELA--RMKLLCSACEAAEASVLCC 54
>AK109869:Os04g0283800 | Length = 427 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -2 Query: 714 VSILTANTVALPSTLPILSNLKMFLAKAKLQDTTRTTIFEPCPLRSSSSSP 562 VS+L + + S+ P +++FL A T +T PLR S+SSP Sbjct: 255 VSLLFFHEAVMASSKPKQGRIRVFLFAAHDAPATSSTSPTAAPLRRSASSP 305
>AK109678:Os03g0178500 | Length = 330 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = -2 Query: 675 TLPILSNLKMFLAKAKLQDTTRTTIFEPCPLRSSSSSPNWLCIPYTSSGETKWLLSRTSP 496 +L L+ L++ +L T TT+ CP S+ P L + + G++KW +R P Sbjct: 44 SLHFLARLRIRPVHLRLPGTDATTVRVWCPAAPSAKPP--LLLLHGFGGDSKWTWARNLP 101 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,503,760 Number of extensions: 669402 Number of successful extensions: 2092 Number of sequences better than 10.0: 11 Number of HSP's gapped: 2074 Number of HSP's successfully gapped: 11 Length of query: 355 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 253 Effective length of database: 11,315,673 Effective search space: 2862865269 Effective search space used: 2862865269 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)