ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38n09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q59943:F16P_SYNP7 Fructose-1,6-bisphosphatase F-II - Synechococc... 34 0.90
2P15265:MCSP_MOUSE Sperm mitochondrial-associated cysteine-rich p... 33 2.0
3P48847:F16P_NOSPU Fructose-1,6-bisphosphatase - Nostoc punctiforme 33 2.0
4P48991:F16P_ANASP Fructose-1,6-bisphosphatase - Anabaena sp. (st... 33 2.6
5Q9VFN2:OR88A_DROME Putative odorant receptor 88a - Drosophila me... 32 3.4
6P31503:PO2F1_RAT POU domain, class 2, transcription factor 1 - R... 32 5.8
7P20629:NIFQ_RHOCA Protein nifQ - Rhodobacter capsulatus (Rhodops... 31 9.9

>Q59943:F16P_SYNP7 Fructose-1,6-bisphosphatase F-II - Synechococcus sp. (strain PCC|
           7942) (Anacystis nidulans R2)
          Length = 344
 Score = 34.3 bits (77), Expect = 0.90
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +2

Query: 419 RILLAARLAEHRGKGHGIIEEALGFVGDVRDKSHFVSPEDVY 544
           RI LAA+L   R    G++++ALGF G++  +   V   DVY
Sbjct: 45  RIGLAAKLIARRLSHAGLVDDALGFTGEINVQGEAVKRMDVY 86



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>P15265:MCSP_MOUSE Sperm mitochondrial-associated cysteine-rich protein - Mus musculus|
           (Mouse)
          Length = 143

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 255 CPPPCGGRCPLTTTCPLGAP 196
           CPPPC   CP T  CPL  P
Sbjct: 54  CPPPCPCPCPATCPCPLKPP 73



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>P48847:F16P_NOSPU Fructose-1,6-bisphosphatase - Nostoc punctiforme|
          Length = 349

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 416 SRILLAARLAEHRGKGHGIIEEALGFVGDVRDKSHFVSPEDVY 544
           +RI LA +L   R    G++E  LGF G+V  +   V   DVY
Sbjct: 50  NRIALAGKLVARRMSRAGLMEGVLGFTGEVNVQGESVKKMDVY 92



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>P48991:F16P_ANASP Fructose-1,6-bisphosphatase - Anabaena sp. (strain PCC 7120)|
          Length = 349

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 416 SRILLAARLAEHRGKGHGIIEEALGFVGDVRDKSHFVSPEDVY 544
           +RI LA +L   R    G++E  LGF G+V  +   V   DVY
Sbjct: 50  NRIALAGKLVARRLSRAGLMEGVLGFTGEVNVQGESVKKMDVY 92



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>Q9VFN2:OR88A_DROME Putative odorant receptor 88a - Drosophila melanogaster (Fruit fly)|
          Length = 401

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 21/54 (38%), Positives = 26/54 (48%)
 Frame = +2

Query: 653 RFERMGSVLGNATVFAVSMLTFLQLHQLASGKQTPAVQYRRTDNGSLSGGSRKD 814
           RF R+ S LG      V +  FL  H+   GK TP  Q+ +   G L  G RKD
Sbjct: 139 RFIRIYSHLGGPMFCVVPLALFLLTHE---GKDTPVAQHEQLLGGWLPCGVRKD 189



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>P31503:PO2F1_RAT POU domain, class 2, transcription factor 1 - Rattus norvegicus|
           (Rat)
          Length = 632

 Score = 31.6 bits (70), Expect = 5.8
 Identities = 29/110 (26%), Positives = 46/110 (41%)
 Frame = -2

Query: 705 LTANTVALPSTLPILSNLKMFLAKAKLQDTTRTTIFEPCPLRSSSSSPNWLCIPYTSSGE 526
           LT N V LP T   ++NL +        + T T I    P  S+ +SP+    P  S+  
Sbjct: 365 LTVNPV-LPLTSAAMTNLSLTGTTDSTSNNTATVISTAPPASSAVTSPSLSPSPSASAST 423

Query: 525 TKWLLSRTSPTKPKASSMIPCPFPLCSANLAARRMRLCCTLAIAASRSAR 376
           ++   S  S T    ++  P P PL ++ +      L    A A   +A+
Sbjct: 424 SE--ASSASETSTTQTTSTPLPSPLGASQVMVTASGLQTAAAAALQGAAQ 471



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>P20629:NIFQ_RHOCA Protein nifQ - Rhodobacter capsulatus (Rhodopseudomonas capsulata)|
          Length = 180

 Score = 30.8 bits (68), Expect = 9.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 798 PEREPLSVLLYWTAGVCLPEANW 730
           P+++ +  L+ W AGV  PEA W
Sbjct: 75  PDQQAIETLILWRAGVATPEARW 97


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 168,079,808
Number of extensions: 3731952
Number of successful extensions: 10517
Number of sequences better than 10.0: 7
Number of HSP's gapped: 10495
Number of HSP's successfully gapped: 7
Length of query: 355
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 241
Effective length of database: 69,416,809
Effective search space: 16729450969
Effective search space used: 16729450969
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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