ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38n09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001064254.1| Oryza sativa (japonica cultivar-group) Os06g... 109 2e-20
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 109 2e-20
3dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic D... 109 2e-20
4dbj|AK108056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 2e-20
5ref|NM_001064253.1| Oryza sativa (japonica cultivar-group) Os06g... 103 1e-18
6dbj|AK109247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 1e-18
7ref|NM_001048986.1| Oryza sativa (japonica cultivar-group) Os01g... 74 1e-09
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 74 1e-09
9dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 74 1e-09
10ref|NM_001053029.1| Oryza sativa (japonica cultivar-group) Os02g... 64 1e-06
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 64 1e-06
12dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic D... 64 1e-06
13dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 64 1e-06
14dbj|AK072028.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 1e-06
15gb|DQ244481.1| Zea mays clone 8210 mRNA sequence 46 0.26
16emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on ch... 46 0.26
17dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 46 0.26
18gb|AC170265.4| Mus musculus BAC RP23-54H4 (Roswell Park Cancer ... 44 1.0
19ref|XM_864408.1| PREDICTED: Bos taurus similar to CD276 antigen ... 44 1.0
20gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosom... 44 1.0
21dbj|AK043974.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 44 1.0
22gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 44 1.0
23gb|AC159232.2| Mus musculus BAC clone RP24-392E16 from chromosom... 44 1.0
24gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Canc... 44 1.0
25gb|AC121504.14| Mus musculus chromosome 13, clone RP24-140A15, c... 44 1.0
26gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, comple... 44 1.0
27ref|NM_001068978.1| Oryza sativa (japonica cultivar-group) Os08g... 42 4.0
28ref|NM_001064927.1| Oryza sativa (japonica cultivar-group) Os06g... 42 4.0
29ref|NM_001063307.1| Oryza sativa (japonica cultivar-group) Os06g... 42 4.0
30gb|AC189588.1| Brassica rapa subsp. pekinensis clone KBrH012N11,... 42 4.0
31ref|XM_001075609.1| PREDICTED: Rattus norvegicus bromodomain con... 42 4.0
32ref|XM_342396.3| PREDICTED: Rattus norvegicus bromodomain contai... 42 4.0
33dbj|AK165817.1| Mus musculus 14 days embryo lung cDNA, RIKEN ful... 42 4.0
34dbj|AK080537.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 42 4.0
35dbj|AK034797.1| Mus musculus 12 days embryo embryonic body betwe... 42 4.0
36dbj|AK078563.1| Mus musculus 11 days embryo gonad cDNA, RIKEN fu... 42 4.0
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.0
38emb|AL078634.24|HS1049G11 Human DNA sequence from clone RP5-1049... 42 4.0
39dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.0
40dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.0
41dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.0
42dbj|AK110639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.0
43dbj|AK103971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.0
44dbj|AK073269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.0
45emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 42 4.0
46emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chro... 42 4.0 
>ref|NM_001064254.1| Oryza sativa (japonica cultivar-group) Os06g0506000 (Os06g0506000)
           mRNA, complete cds
          Length = 934
 Score =  109 bits (55), Expect = 2e-20
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                       
Query: 386 cgagatgccgcgattgctagggtgcagcaaagtcgcattctccttgctgcaaggttggct 445
           ||||||||||||||||||||| ||||||||||||| ||||| |||||| |||| ||||||
Sbjct: 418 cgagatgccgcgattgctaggctgcagcaaagtcgtattctgcttgctacaagattggct 477

                                                                       
Query: 446 gaacatagaggaaaggggcatggaatcattgaggaagccttaggtttcgtgggtgatgtg 505
           ||||||||  | |||  ||||| | | |||||||| ||||||| ||| || | ||||| |
Sbjct: 478 gaacataggtggaagaagcatgaagttattgaggaggccttagcttttgttgatgatgcg 537

                                              
Query: 506 cgtgacaagagccattttgtctcgccggaagatgt 540
           | ||||||||| |  |||||||| || ||||||||
Sbjct: 538 cttgacaagagtcgatttgtctcaccagaagatgt 572



 Score =  103 bits (52), Expect = 1e-18
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                       
Query: 105 tgcaggagcgcatctgggacctccatgacaagctcagccacgccatcctcgccctctccg 164
           ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 134 tgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccg 193

                   
Query: 165 cctgcgcc 172
           ||| ||||
Sbjct: 194 cctccgcc 201



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 693 tgtttgcagtaagtatgctcacattcttgcagcttcaccaattggcctctggtaaacaaa 752
           |||||||||||||||||||  ||||||||||||| || ||| |||||| |||||||||||
Sbjct: 728 tgtttgcagtaagtatgcttgcattcttgcagctgcaacaagtggcctttggtaaacaaa 787

                     
Query: 753 caccagcagt 762
           | ||||||||
Sbjct: 788 ctccagcagt 797



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 324 tcgaggacctcgagggccacctccacttcct 354
           ||||||||||||||||||||||||| |||||
Sbjct: 356 tcgaggacctcgagggccacctccatttcct 386
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  109 bits (55), Expect = 2e-20
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                            
Query: 386      cgagatgccgcgattgctagggtgcagcaaagtcgcattctccttgctgcaaggttggct 445
                ||||||||||||||||||||| ||||||||||||| ||||| |||||| |||| ||||||
Sbjct: 17776552 cgagatgccgcgattgctaggctgcagcaaagtcgtattctgcttgctacaagattggct 17776611

                                                                            
Query: 446      gaacatagaggaaaggggcatggaatcattgaggaagccttaggtttcgtgggtgatgtg 505
                ||||||||  | |||  ||||| | | |||||||| ||||||| ||| || | ||||| |
Sbjct: 17776612 gaacataggtggaagaagcatgaagttattgaggaggccttagcttttgttgatgatgcg 17776671

                                                   
Query: 506      cgtgacaagagccattttgtctcgccggaagatgt 540
                | ||||||||| |  |||||||| || ||||||||
Sbjct: 17776672 cttgacaagagtcgatttgtctcaccagaagatgt 17776706



 Score =  103 bits (52), Expect = 1e-18
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 105      tgcaggagcgcatctgggacctccatgacaagctcagccacgccatcctcgccctctccg 164
                ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 17775226 tgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccg 17775285

                        
Query: 165      cctgcgcc 172
                ||| ||||
Sbjct: 17775286 cctccgcc 17775293



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                            
Query: 693      tgtttgcagtaagtatgctcacattcttgcagcttcaccaattggcctctggtaaacaaa 752
                |||||||||||||||||||  ||||||||||||| || ||| |||||| |||||||||||
Sbjct: 17776862 tgtttgcagtaagtatgcttgcattcttgcagctgcaacaagtggcctttggtaaacaaa 17776921

                          
Query: 753      caccagcagt 762
                | ||||||||
Sbjct: 17776922 ctccagcagt 17776931



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 324      tcgaggacctcgagggccacctccacttcct 354
                ||||||||||||||||||||||||| |||||
Sbjct: 17775448 tcgaggacctcgagggccacctccatttcct 17775478



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 998      tgtaaatggtttgagattagcaatagatgcactgg 1032
                |||||||||||| ||||| |||||||||| |||||
Sbjct: 17777164 tgtaaatggttttagattggcaatagatgaactgg 17777198



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 75      cgccggcgacggaagcggaggcggaggcg 103
               |||||||| |||| |||||||||||||||
Sbjct: 2246950 cgccggcggcggaggcggaggcggaggcg 2246922



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 79       ggcgacggaagcggaggcggaggcg 103
                ||||||||| |||||||||||||||
Sbjct: 28109760 ggcgacggaggcggaggcggaggcg 28109784
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>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0026G06
          Length = 123129

 Score =  109 bits (55), Expect = 2e-20
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                         
Query: 386   cgagatgccgcgattgctagggtgcagcaaagtcgcattctccttgctgcaaggttggct 445
             ||||||||||||||||||||| ||||||||||||| ||||| |||||| |||| ||||||
Sbjct: 46974 cgagatgccgcgattgctaggctgcagcaaagtcgtattctgcttgctacaagattggct 47033

                                                                         
Query: 446   gaacatagaggaaaggggcatggaatcattgaggaagccttaggtttcgtgggtgatgtg 505
             ||||||||  | |||  ||||| | | |||||||| ||||||| ||| || | ||||| |
Sbjct: 47034 gaacataggtggaagaagcatgaagttattgaggaggccttagcttttgttgatgatgcg 47093

                                                
Query: 506   cgtgacaagagccattttgtctcgccggaagatgt 540
             | ||||||||| |  |||||||| || ||||||||
Sbjct: 47094 cttgacaagagtcgatttgtctcaccagaagatgt 47128



 Score =  103 bits (52), Expect = 1e-18
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                         
Query: 105   tgcaggagcgcatctgggacctccatgacaagctcagccacgccatcctcgccctctccg 164
             ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 45648 tgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccg 45707

                     
Query: 165   cctgcgcc 172
             ||| ||||
Sbjct: 45708 cctccgcc 45715



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                         
Query: 693   tgtttgcagtaagtatgctcacattcttgcagcttcaccaattggcctctggtaaacaaa 752
             |||||||||||||||||||  ||||||||||||| || ||| |||||| |||||||||||
Sbjct: 47284 tgtttgcagtaagtatgcttgcattcttgcagctgcaacaagtggcctttggtaaacaaa 47343

                       
Query: 753   caccagcagt 762
             | ||||||||
Sbjct: 47344 ctccagcagt 47353



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 324   tcgaggacctcgagggccacctccacttcct 354
             ||||||||||||||||||||||||| |||||
Sbjct: 45870 tcgaggacctcgagggccacctccatttcct 45900



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 998   tgtaaatggtttgagattagcaatagatgcactgg 1032
             |||||||||||| ||||| |||||||||| |||||
Sbjct: 47586 tgtaaatggttttagattggcaatagatgaactgg 47620
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>dbj|AK108056.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H12, full
           insert sequence
          Length = 934

 Score =  109 bits (55), Expect = 2e-20
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                       
Query: 386 cgagatgccgcgattgctagggtgcagcaaagtcgcattctccttgctgcaaggttggct 445
           ||||||||||||||||||||| ||||||||||||| ||||| |||||| |||| ||||||
Sbjct: 418 cgagatgccgcgattgctaggctgcagcaaagtcgtattctgcttgctacaagattggct 477

                                                                       
Query: 446 gaacatagaggaaaggggcatggaatcattgaggaagccttaggtttcgtgggtgatgtg 505
           ||||||||  | |||  ||||| | | |||||||| ||||||| ||| || | ||||| |
Sbjct: 478 gaacataggtggaagaagcatgaagttattgaggaggccttagcttttgttgatgatgcg 537

                                              
Query: 506 cgtgacaagagccattttgtctcgccggaagatgt 540
           | ||||||||| |  |||||||| || ||||||||
Sbjct: 538 cttgacaagagtcgatttgtctcaccagaagatgt 572



 Score =  103 bits (52), Expect = 1e-18
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                       
Query: 105 tgcaggagcgcatctgggacctccatgacaagctcagccacgccatcctcgccctctccg 164
           ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 134 tgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccg 193

                   
Query: 165 cctgcgcc 172
           ||| ||||
Sbjct: 194 cctccgcc 201



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 693 tgtttgcagtaagtatgctcacattcttgcagcttcaccaattggcctctggtaaacaaa 752
           |||||||||||||||||||  ||||||||||||| || ||| |||||| |||||||||||
Sbjct: 728 tgtttgcagtaagtatgcttgcattcttgcagctgcaacaagtggcctttggtaaacaaa 787

                     
Query: 753 caccagcagt 762
           | ||||||||
Sbjct: 788 ctccagcagt 797



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 324 tcgaggacctcgagggccacctccacttcct 354
           ||||||||||||||||||||||||| |||||
Sbjct: 356 tcgaggacctcgagggccacctccatttcct 386
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>ref|NM_001064253.1| Oryza sativa (japonica cultivar-group) Os06g0505900 (Os06g0505900)
           mRNA, complete cds
          Length = 747

 Score =  103 bits (52), Expect = 1e-18
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                       
Query: 105 tgcaggagcgcatctgggacctccatgacaagctcagccacgccatcctcgccctctccg 164
           ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 482 tgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccg 423

                   
Query: 165 cctgcgcc 172
           ||| ||||
Sbjct: 422 cctccgcc 415



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 324 tcgaggacctcgagggccacctccacttcct 354
           ||||||||||||||||||||||||| |||||
Sbjct: 260 tcgaggacctcgagggccacctccatttcct 230
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>dbj|AK109247.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-H01, full
           insert sequence
          Length = 747

 Score =  103 bits (52), Expect = 1e-18
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                       
Query: 105 tgcaggagcgcatctgggacctccatgacaagctcagccacgccatcctcgccctctccg 164
           ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 482 tgcaggagcgcatctgggacctccacgacaatctcagccacgccatcctctccctctccg 423

                   
Query: 165 cctgcgcc 172
           ||| ||||
Sbjct: 422 cctccgcc 415



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 324 tcgaggacctcgagggccacctccacttcct 354
           ||||||||||||||||||||||||| |||||
Sbjct: 260 tcgaggacctcgagggccacctccatttcct 230
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>ref|NM_001048986.1| Oryza sativa (japonica cultivar-group) Os01g0224200 (Os01g0224200)
           mRNA, complete cds
          Length = 768

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 91  ggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgccat 150
           ||||||||||||  ||| ||||  ||||||||||||||| |||||| ||||| |||||||
Sbjct: 12  ggaggcggaggccgtgctggagaccatctgggacctccacgacaaggtcagcgacgccat 71

                        
Query: 151 cctcgccctctcc 163
           || ||||||||||
Sbjct: 72  ccacgccctctcc 84
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                           
Query: 91      ggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgccat 150
               ||||||||||||  ||| ||||  ||||||||||||||| |||||| ||||| |||||||
Sbjct: 6831759 ggaggcggaggccgtgctggagaccatctgggacctccacgacaaggtcagcgacgccat 6831700

                            
Query: 151     cctcgccctctcc 163
               || ||||||||||
Sbjct: 6831699 ccacgccctctcc 6831687
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>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0417G05
          Length = 147803

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                          
Query: 91     ggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgccat 150
              ||||||||||||  ||| ||||  ||||||||||||||| |||||| ||||| |||||||
Sbjct: 113820 ggaggcggaggccgtgctggagaccatctgggacctccacgacaaggtcagcgacgccat 113761

                           
Query: 151    cctcgccctctcc 163
              || ||||||||||
Sbjct: 113760 ccacgccctctcc 113748
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>ref|NM_001053029.1| Oryza sativa (japonica cultivar-group) Os02g0264300 (Os02g0264300)
           mRNA, complete cds
          Length = 1417

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 88  agcggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgc 147
           |||||||||||||| | ||| |||||| ||||||||||| || |||   |||||| ||||
Sbjct: 183 agcggaggcggaggaggtgctggagcggatctgggacctgcacgaccgcctcagcgacgc 242

                           
Query: 148 catcctcgccctctcc 163
           |||||||||| |||||
Sbjct: 243 catcctcgccgtctcc 258



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 818  aaaggaaagcatctggaagtgttattagctagaggttgatgaatcatca 866
            ||||||||||| || |||||||   |||| ||||||||| |||||||||
Sbjct: 982  aaaggaaagcaactcgaagtgtacctagccagaggttgaggaatcatca 1030
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                           
Query: 88      agcggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgc 147
               |||||||||||||| | ||| |||||| ||||||||||| || |||   |||||| ||||
Sbjct: 9392745 agcggaggcggaggaggtgctggagcggatctgggacctgcacgaccgcctcagcgacgc 9392686

                               
Query: 148     catcctcgccctctcc 163
               |||||||||| |||||
Sbjct: 9392685 catcctcgccgtctcc 9392670



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 818     aaaggaaagcatctggaagtgttattagctagaggttgatgaatcatca 866
               ||||||||||| || |||||||   |||| ||||||||| |||||||||
Sbjct: 9390957 aaaggaaagcaactcgaagtgtacctagccagaggttgaggaatcatca 9390909
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>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0011J03
          Length = 176461

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                          
Query: 88     agcggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgc 147
              |||||||||||||| | ||| |||||| ||||||||||| || |||   |||||| ||||
Sbjct: 152999 agcggaggcggaggaggtgctggagcggatctgggacctgcacgaccgcctcagcgacgc 152940

                              
Query: 148    catcctcgccctctcc 163
              |||||||||| |||||
Sbjct: 152939 catcctcgccgtctcc 152924



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                               
Query: 818    aaaggaaagcatctggaagtgttattagctagaggttgatgaatcatca 866
              ||||||||||| || |||||||   |||| ||||||||| |||||||||
Sbjct: 151211 aaaggaaagcaactcgaagtgtacctagccagaggttgaggaatcatca 151163
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>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0006C08
          Length = 151987

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 88   agcggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgc 147
            |||||||||||||| | ||| |||||| ||||||||||| || |||   |||||| ||||
Sbjct: 6306 agcggaggcggaggaggtgctggagcggatctgggacctgcacgaccgcctcagcgacgc 6247

                            
Query: 148  catcctcgccctctcc 163
            |||||||||| |||||
Sbjct: 6246 catcctcgccgtctcc 6231



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 818  aaaggaaagcatctggaagtgttattagctagaggttgatgaatcatca 866
            ||||||||||| || |||||||   |||| ||||||||| |||||||||
Sbjct: 4518 aaaggaaagcaactcgaagtgtacctagccagaggttgaggaatcatca 4470
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>dbj|AK072028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105K02, full
           insert sequence
          Length = 1418

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 88  agcggaggcggaggcgttgcaggagcgcatctgggacctccatgacaagctcagccacgc 147
           |||||||||||||| | ||| |||||| ||||||||||| || |||   |||||| ||||
Sbjct: 184 agcggaggcggaggaggtgctggagcggatctgggacctgcacgaccgcctcagcgacgc 243

                           
Query: 148 catcctcgccctctcc 163
           |||||||||| |||||
Sbjct: 244 catcctcgccgtctcc 259



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 818  aaaggaaagcatctggaagtgttattagctagaggttgatgaatcatca 866
            ||||||||||| || |||||||   |||| ||||||||| |||||||||
Sbjct: 983  aaaggaaagcaactcgaagtgtacctagccagaggttgaggaatcatca 1031
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>gb|DQ244481.1| Zea mays clone 8210 mRNA sequence
          Length = 916

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 333 tcgagggccacctccacttcctt 355
           |||||||||||||||||||||||
Sbjct: 625 tcgagggccacctccacttcctt 647
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>emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on chromosome 11 Contains
             part of the gene for a novel protein (likely ortholog to
             homo sapiens FLJ38335), complete sequence
          Length = 198148

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 51    atgagatgagatgggactgggag 73
             |||||||||||||||||||||||
Sbjct: 30218 atgagatgagatgggactgggag 30240
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>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 327    aggacctcgagggccacctccac 349
              |||||||||||||||||||||||
Sbjct: 193667 aggacctcgagggccacctccac 193645
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>gb|AC170265.4| Mus musculus  BAC RP23-54H4 (Roswell Park Cancer Institute (C57BL/6J
            Female) Mouse BAC Library) complete sequence
          Length = 210754

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 631  tgctttagccaagaacatttta 652
            ||||||||||||||||||||||
Sbjct: 2794 tgctttagccaagaacatttta 2815
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>ref|XM_864408.1| PREDICTED: Bos taurus similar to CD276 antigen isoform a (LOC508656),
            mRNA
          Length = 3066

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 183  cctgcctctgccggggcgcccc 204
            ||||||||||||||||||||||
Sbjct: 2291 cctgcctctgccggggcgcccc 2312
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>gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosome 18, complete
            sequence
          Length = 184588

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 818  aaaggaaagcatctggaagtgt 839
            ||||||||||||||||||||||
Sbjct: 7882 aaaggaaagcatctggaagtgt 7903
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>dbj|AK043974.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830062A19
           product:unclassifiable, full insert sequence
          Length = 802

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 818 aaaggaaagcatctggaagtgt 839
           ||||||||||||||||||||||
Sbjct: 35  aaaggaaagcatctggaagtgt 56
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 853   ttgatgaatcatcagatacaggaagc 878
             ||||||||||||||||||||| ||||
Sbjct: 82436 ttgatgaatcatcagatacagaaagc 82411
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>gb|AC159232.2| Mus musculus BAC clone RP24-392E16 from chromosome 13, complete sequence
          Length = 169281

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 533    gaagatgtgtatggaatgcaca 554
              ||||||||||||||||||||||
Sbjct: 143913 gaagatgtgtatggaatgcaca 143892
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>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 193116

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 631    tgctttagccaagaacatttta 652
              ||||||||||||||||||||||
Sbjct: 104028 tgctttagccaagaacatttta 104007
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>gb|AC121504.14| Mus musculus chromosome 13, clone RP24-140A15, complete sequence
          Length = 156791

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 533    gaagatgtgtatggaatgcaca 554
              ||||||||||||||||||||||
Sbjct: 123999 gaagatgtgtatggaatgcaca 124020
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>gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, complete sequence
          Length = 193186

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 818    aaaggaaagcatctggaagtgt 839
              ||||||||||||||||||||||
Sbjct: 183075 aaaggaaagcatctggaagtgt 183096
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>ref|NM_001068978.1| Oryza sativa (japonica cultivar-group) Os08g0550000 (Os08g0550000)
           mRNA, complete cds
          Length = 426

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 75  cgccggcgacggaagcggaggcggaggcg 103
           |||||||| |||| |||||||||||||||
Sbjct: 38  cgccggcggcggaggcggaggcggaggcg 66
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>ref|NM_001064927.1| Oryza sativa (japonica cultivar-group) Os06g0683800 (Os06g0683800)
           mRNA, complete cds
          Length = 691

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 79  ggcgacggaagcggaggcggaggcg 103
           ||||||||| |||||||||||||||
Sbjct: 227 ggcgacggaggcggaggcggaggcg 251
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>ref|NM_001063307.1| Oryza sativa (japonica cultivar-group) Os06g0142800 (Os06g0142800)
           mRNA, complete cds
          Length = 1420

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 75  cgccggcgacggaagcggaggcggaggcg 103
           |||||||| |||| |||||||||||||||
Sbjct: 83  cgccggcggcggaggcggaggcggaggcg 55
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>gb|AC189588.1| Brassica rapa subsp. pekinensis clone KBrH012N11, complete sequence
          Length = 109557

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 633   ctttagccaagaacattttaa 653
             |||||||||||||||||||||
Sbjct: 43470 ctttagccaagaacattttaa 43490
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>ref|XM_001075609.1| PREDICTED: Rattus norvegicus bromodomain containing 3 (predicted)
            (Brd3_predicted), mRNA
          Length = 5367

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 818  aaaggaaagcatctggaagtgttat 842
            |||||||||| ||||||||||||||
Sbjct: 5060 aaaggaaagcttctggaagtgttat 5036
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>ref|XM_342396.3| PREDICTED: Rattus norvegicus bromodomain containing 3 (predicted)
            (Brd3_predicted), mRNA
          Length = 5163

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 818  aaaggaaagcatctggaagtgttat 842
            |||||||||| ||||||||||||||
Sbjct: 4856 aaaggaaagcttctggaagtgttat 4832
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>dbj|AK165817.1| Mus musculus 14 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:G630094J01 product:bromodomain containing
            3, full insert sequence
          Length = 2299

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 818  aaaggaaagcatctggaagtgttat 842
            |||||||||| ||||||||||||||
Sbjct: 1997 aaaggaaagcctctggaagtgttat 1973
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>dbj|AK080537.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730079H24
           product:bromodomain-containing 3, full insert sequence
          Length = 988

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 818 aaaggaaagcatctggaagtgttat 842
           |||||||||| ||||||||||||||
Sbjct: 692 aaaggaaagcctctggaagtgttat 668
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>dbj|AK034797.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430040A05 product:bromodomain-containing 3, full
            insert sequence
          Length = 1774

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 818  aaaggaaagcatctggaagtgttat 842
            |||||||||| ||||||||||||||
Sbjct: 1479 aaaggaaagcctctggaagtgttat 1455
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>dbj|AK078563.1| Mus musculus 11 days embryo gonad cDNA, RIKEN full-length enriched
           library, clone:7030403M22 product:bromodomain-containing
           3, full insert sequence
          Length = 913

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 818 aaaggaaagcatctggaagtgttat 842
           |||||||||| ||||||||||||||
Sbjct: 633 aaaggaaagcctctggaagtgttat 609
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 75       cgccggcgacggaagcggaggcggaggcg 103
                |||||||| |||| |||||||||||||||
Sbjct: 27578894 cgccggcggcggaggcggaggcggaggcg 27578922
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>emb|AL078634.24|HS1049G11 Human DNA sequence from clone RP5-1049G11 on chromosome 20p11.1-11.23
             Contains part of the KIAA1272 gene for a protein similar
             to rat tulip proteins 1 and 2, the 5' part of the gene for
             a novel protein similar to eukaryotic translation
             initiation factor 4E-like 4 and part of a novel protein
             similar to fly CG552, complete sequence
          Length = 136168

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 805   aagaaaagacagtaaaggaaa 825
             |||||||||||||||||||||
Sbjct: 55696 aagaaaagacagtaaaggaaa 55676
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>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0535G04
          Length = 154180

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 75     cgccggcgacggaagcggaggcggaggcg 103
              |||||||| |||| |||||||||||||||
Sbjct: 106407 cgccggcggcggaggcggaggcggaggcg 106379
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>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    ggcgacggaagcggaggcggaggcg 103
             ||||||||| |||||||||||||||
Sbjct: 40666 ggcgacggaggcggaggcggaggcg 40690
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>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 75    cgccggcgacggaagcggaggcggaggcg 103
             |||||||| |||| |||||||||||||||
Sbjct: 61184 cgccggcggcggaggcggaggcggaggcg 61212
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>dbj|AK110639.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-C08, full
           insert sequence
          Length = 690

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 79  ggcgacggaagcggaggcggaggcg 103
           ||||||||| |||||||||||||||
Sbjct: 227 ggcgacggaggcggaggcggaggcg 251
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>dbj|AK103971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C05, full
           insert sequence
          Length = 1420

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 75  cgccggcgacggaagcggaggcggaggcg 103
           |||||||| |||| |||||||||||||||
Sbjct: 83  cgccggcggcggaggcggaggcggaggcg 55
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>dbj|AK073269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028C20, full
           insert sequence
          Length = 1404

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 75  cgccggcgacggaagcggaggcggaggcg 103
           |||||||| |||| |||||||||||||||
Sbjct: 87  cgccggcggcggaggcggaggcggaggcg 59
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>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     gcgacggaagcggaggcggaggcgt 104
              ||||||||| |||||||||||||||
Sbjct: 131717 gcgacggaaacggaggcggaggcgt 131741
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>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete
             sequence
          Length = 188624

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 818   aaaggaaagcatctggaagtgttat 842
             |||||||||| ||||||||||||||
Sbjct: 22545 aaaggaaagcctctggaagtgttat 22569


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 172,856,690
Number of extensions: 9593466
Number of successful extensions: 266800
Number of sequences better than 10.0: 46
Number of HSP's gapped: 266788
Number of HSP's successfully gapped: 69
Length of query: 1066
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1043
Effective length of database: 18,503,978,556
Effective search space: 19299649633908
Effective search space used: 19299649633908
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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