ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf37m17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8VCX2:S35C2_MOUSE Solute carrier family 35 member C2 - Mus musc... 47 2e-04
2P22215:SLY41_YEAST Protein SLY41 - Saccharomyces cerevisiae (Bak... 38 0.14
3Q95YI5:US74C_DROME UDP-sugar transporter UST74c - Drosophila mel... 37 0.24
4Q9NTN3:S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine... 37 0.31
5Q09875:YAGC_SCHPO Uncharacterized protein C12G12.12 - Schizosacc... 32 5.8
6Q95ZY4:SRB5_CAEEL Serpentine receptor class beta-5 - Caenorhabdi... 32 7.6
7Q8IZT6:ASPM_HUMAN Abnormal spindle-like microcephaly-associated ... 32 9.9

>Q8VCX2:S35C2_MOUSE Solute carrier family 35 member C2 - Mus musculus (Mouse)|
          Length = 364
 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 62/296 (20%), Positives = 107/296 (36%), Gaps = 28/296 (9%)
 Frame = +1

Query: 283  KAALDAGAWMFNVVTSVGIIMVNKALMATHGFSFATTLTGMHFATTTLMT---------- 432
            KAAL  G  +     S+GI   NK L  T  F F   +T +H A   L +          
Sbjct: 13   KAALTLGLVLLYYCFSIGITFYNKWL--TKSFHFPLFMTMLHLAVIFLFSALSRALVQCS 70

Query: 433  -----LVMKWLGYVQPSHLPLSELVKFVFFANLSIVGMNVSLMWNSVGFYQIAKLSIIPL 597
                 +V+ W  Y       L  +        L +   N S ++ +V  Y + K S +  
Sbjct: 71   SHKARVVLSWTDY-------LRRVAPTALATALDVGLSNWSFLYITVSLYTMTKSSAVLF 123

Query: 598  LCIMEVLFENFRYSRDTKLSIXXXXXXXXXXXXXXXXXNAQGLVAAVIAVCGTALQQHYV 777
            + I  ++F+         L +                 N +G    + A     ++    
Sbjct: 124  ILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLT 183

Query: 778  NYLQRKYSL---NSLKLLGHTAPAQAASLLILGPFVDFWL-------TRNRIDTFHYTST 927
              L +K  L   N +  + H  P     L+ LG F  F +       T  +I  F  T  
Sbjct: 184  QILLQKADLGLQNPIDTMFHLQP-----LMFLGLFPLFAIFEGLHLSTSEKIFRFQDTGL 238

Query: 928  VTFF---IVLSCVISVGTNLSQFICIGRFTAVTFQVIGHMKTILVLTLGFLLFGKE 1086
            + +    ++L  +++ G   S+F+ + R +++T  + G  K +  L L   L G +
Sbjct: 239  LLWVLGSLLLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQ 294



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>P22215:SLY41_YEAST Protein SLY41 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 453

 Score = 37.7 bits (86), Expect = 0.14
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +1

Query: 985  FICIGRFTAVTFQVIGHMKTILVLTLGFLLFGKEGLNFHVAFGMILAIVGMIWYSS-ASS 1161
            F  IG  +++ + V   MK I+V+++   LF +  LNF   FG+IL I G+  Y     S
Sbjct: 389  FQLIGLLSSINYSVANIMKRIVVISVA--LFWETKLNFFQVFGVILTIAGLYGYDKWGLS 446

Query: 1162 KPGGKE 1179
            K  G++
Sbjct: 447  KKDGRQ 452



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>Q95YI5:US74C_DROME UDP-sugar transporter UST74c - Drosophila melanogaster (Fruit fly)|
          Length = 373

 Score = 37.0 bits (84), Expect = 0.24
 Identities = 59/294 (20%), Positives = 118/294 (40%), Gaps = 11/294 (3%)
 Frame = +1

Query: 301  GAWMFNVVTSVGIIMVNKALMATHGF-SFATTLTGMHFATTTLMTLVM-KWLGYVQPSHL 474
            G+ +F  ++S  I +VNK ++ ++ F SF     G    T +++ L M K L  V    L
Sbjct: 65   GSALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQ--LTASIVVLGMGKRLKLVNFPPL 122

Query: 475  PLSELVKF-----VFFANLSIVGMNVSLMWNSVGFYQIAKLSIIPLLCIMEVLFENFRYS 639
              +   K      +F  N+ + G+  +   +   F  + + SI+ +  ++E+     R S
Sbjct: 123  QRNTFAKIFPLPLIFLGNM-MFGLGGTKTLSLPMFAALRRFSIL-MTMLLELKILGLRPS 180

Query: 640  RDTKLSIXXXXXXXXXXXXXXXXXNAQGLVAAVIAVCGTALQQHYVNYLQRKYSLNSLKL 819
               ++S+                 N +G +  +I    TA    YV        +    L
Sbjct: 181  NAVQVSVYAMIGGALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGL 240

Query: 820  LGHTAPAQAASLLILGPFVDFWLTRNRIDTFHYT----STVTFFIVLSCVISVGTNLSQF 987
            + + +       L L      ++T N     ++     S      +LSCV+    + S  
Sbjct: 241  MYYNSLFMFLPALALN-----YVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTI 295

Query: 988  ICIGRFTAVTFQVIGHMKTILVLTLGFLLFGKEGLNFHVAFGMILAIVGMIWYS 1149
            +C    +A+T  ++G +K I V  LG  + G    ++    G+ ++++  + Y+
Sbjct: 296  LCTQFNSALTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYT 349



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>Q9NTN3:S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter - Homo|
            sapiens (Human)
          Length = 355

 Score = 36.6 bits (83), Expect = 0.31
 Identities = 61/303 (20%), Positives = 115/303 (37%), Gaps = 6/303 (1%)
 Frame = +1

Query: 313  FNVVTSVGIIMVNKALMATHGFSFATTLTGMHFATTTLMTLVMKWLGYVQPSHLPLSELV 492
            F  V+S  I++VNK+++  + F  +  +       T  +  V K L  V+   L  +   
Sbjct: 48   FYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPR 107

Query: 493  K-----FVFFANLSIVGMNVSLMWNSVGFYQIAKLSIIPLLCIMEVLFENFRYSRDTKLS 657
            K      ++F N  I G+  +   N   F  + + SI+  +    VL +   +S   K++
Sbjct: 108  KTFPLPLLYFGN-QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKK-TFSWGIKMT 165

Query: 658  IXXXXXXXXXXXXXXXXXNAQGLVAAVIAVCGTALQQHYVNYLQRKYSLNSLKLLGHTAP 837
            +                 + +G    +I    TA    YV        L    LL + A 
Sbjct: 166  VFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNAL 225

Query: 838  AQAASLLILGPFVDFWLTRNRIDTFHYTSTVTFF-IVLSCVISVGTNLSQFICIGRFTAV 1014
                  L +  F      +  ++   +  T+      LSCV+      +  +C    +A+
Sbjct: 226  FMILPTLAIAYFTGD--AQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSAL 283

Query: 1015 TFQVIGHMKTILVLTLGFLLFGKEGLNFHVAFGMILAIVGMIWYSSASSKPGGKERQGVA 1194
            T  ++G +K IL+  +G +  G     +    G+ ++I G + YS  +       +Q  A
Sbjct: 284  TTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEA 343

Query: 1195 SEK 1203
            + K
Sbjct: 344  NNK 346



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>Q09875:YAGC_SCHPO Uncharacterized protein C12G12.12 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 324

 Score = 32.3 bits (72), Expect = 5.8
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 451 GYVQPSHLPLSELVKFVFFANLSIVG---MNVSLMWNSVGFYQIAKLSII 591
           GY    HLPL   V     A + I G   MNV L++ S   YQ+ + S+I
Sbjct: 63  GYESLDHLPLKHKVFMALPAIMDICGSTLMNVGLLYTSASIYQMTRGSLI 112



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>Q95ZY4:SRB5_CAEEL Serpentine receptor class beta-5 - Caenorhabditis elegans|
          Length = 345

 Score = 32.0 bits (71), Expect = 7.6
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
 Frame = +1

Query: 970  TNLSQFICIGRFTAVTFQVIGHMKTILVLTLGFLLFGKEGLNFHVA---------FGMIL 1122
            +N S+F  I  FT + F     + +ILV TLG   FG   LNF+VA         + +++
Sbjct: 235  SNSSKFTLILTFTHLVFFGAYTIGSILVRTLGESFFG-NFLNFYVARGVNCAVPTYNLLI 293

Query: 1123 AIVGMIWYSSASSKPGGK 1176
            A VG+I     +S+   K
Sbjct: 294  AFVGLISLRQLNSRRHAK 311



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>Q8IZT6:ASPM_HUMAN Abnormal spindle-like microcephaly-associated protein - Homo sapiens|
            (Human)
          Length = 3477

 Score = 31.6 bits (70), Expect = 9.9
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = +3

Query: 840  SSSFTVDIRPIRGLLADQE*NRHFSLHQHSDVLHCAVMRYFSRDQSQPIHLH----WEIH 1007
            SS+  +    I  L  D   N     +   +++ C     F +D SQP+HL      EI+
Sbjct: 303  SSTLNITQSQIHFLSPDSFVNNSHGANNELELVTCLSSDMFMKDNSQPVHLESTIAHEIY 362

Query: 1008 RRHISSDRSHEDNSRAN 1058
            ++ +S D   +DN   N
Sbjct: 363  QKILSPDSFIKDNYGLN 379


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 273,542,955
Number of extensions: 5819222
Number of successful extensions: 14335
Number of sequences better than 10.0: 7
Number of HSP's gapped: 14326
Number of HSP's successfully gapped: 7
Length of query: 537
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 419
Effective length of database: 68,319,629
Effective search space: 28625924551
Effective search space used: 28625924551
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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