| Clone Name | FLbaf36p12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101998:Os01g0131300 | 77 | 2e-14 | 2 | AK120342:Os08g0233300 | 32 | 0.61 | 3 | AK067421:Os08g0233300 | 32 | 0.61 | 4 | AK107990:Os07g0613600 | 31 | 1.0 | 5 | AK108433:Os11g0449800 | 31 | 1.4 | 6 | AK108427:Os10g0181100 | 29 | 4.0 | 7 | AK109924:Os11g0538400 | 29 | 5.1 | 8 | AK107108:Os10g0100200 | 28 | 6.7 | 9 | AK101668:Os09g0416600 | 23 | 8.4 | 10 | Os05g0334800:Os05g0334800 | 28 | 8.8 |
|---|
>AK101998:Os01g0131300 | Length = 175 Score = 77.0 bits (188), Expect = 2e-14 Identities = 68/179 (37%), Positives = 80/179 (44%), Gaps = 6/179 (3%) Frame = +2 Query: 221 SGKRGREVDLEGPEAEAAKRMRPEXXXXXXXXXXXXXXXXXXX-SVMRSLEKEICAGDLA 397 + KR R+ + EA+ AKR+R E SVMRS E+EI AGD+A Sbjct: 9 NNKRARDAE---DEADEAKRLRAEDLLDMLDDDTDAGGAAGDLASVMRSFEEEIVAGDVA 65 Query: 398 -----PPQPELGFLLEASDDEXXXXXXXXXXXXXXXXXXWEPEEPAAVFGDQIWGFEDEI 562 QPELGFLLEASDDE EPE+ A FG QIWGFEDEI Sbjct: 66 GDVAPTTQPELGFLLEASDDELGLPPATASSSEEEAGAG-EPED-AIGFGGQIWGFEDEI 123 Query: 563 DGAYAFGSIASSPEXXXXXXXXXXEWXXXXXXXXXXXXXXESFGPSDLAVLRQETMPAV 739 G G +SPE EW FG +++ LR ETMPAV Sbjct: 124 GGGGYAGFALTSPE-AVAAAAAAAEWDDDGFDAGLF-----GFG-DEVSALRHETMPAV 175
>AK120342:Os08g0233300 | Length = 184 Score = 32.0 bits (71), Expect = 0.61 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = +3 Query: 102 PTAPRERIRRRNKGESSSAGRPWRAPPPP 188 PTAPR RRR +G +SS R R PPPP Sbjct: 23 PTAPRSAGRRRRRG-ASSLCRCLRRPPPP 50
>AK067421:Os08g0233300 | Length = 184 Score = 32.0 bits (71), Expect = 0.61 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = +3 Query: 102 PTAPRERIRRRNKGESSSAGRPWRAPPPP 188 PTAPR RRR +G +SS R R PPPP Sbjct: 23 PTAPRSAGRRRRRG-ASSLCRCLRRPPPP 50
>AK107990:Os07g0613600 | Length = 85 Score = 31.2 bits (69), Expect = 1.0 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = +3 Query: 39 LPPVCTFRALFHESGYLHLHPPTAPRERIRRRNKGESSSAGRPWRAPPPP 188 LPP T R L PP+ P +R RRR E R PPPP Sbjct: 32 LPPGSTGRTPCRPCRRALLPPPSPPAQRRRRRPSPEQPHGRRLRHHPPPP 81
>AK108433:Os11g0449800 | Length = 153 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +3 Query: 12 HRFLHHSFPLPPVCTFRALFHESGYLHLHPPTAPRERIRRRNKGES--SSAGRPWRAPPP 185 HR+ H+ P P + R+ + ++ P PR G S S+AGRP +PP Sbjct: 78 HRWKLHAAPPPSMEAERSAAVDGSRVYRRMPNMPRRAAAAAAAGRSTASTAGRPMPSPPH 137 Query: 186 PH 191 H Sbjct: 138 YH 139
>AK108427:Os10g0181100 | Length = 248 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/32 (53%), Positives = 18/32 (56%) Frame = +2 Query: 5 RHAPLFAPLFSPPSRLHVSRPLSRVRLPSPAP 100 RH PL+ LFSP R LSR R PSP P Sbjct: 207 RHLPLYIFLFSP-------RRLSRRRSPSPPP 231
>AK109924:Os11g0538400 | Length = 610 Score = 28.9 bits (63), Expect = 5.1 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +3 Query: 90 HLHPPTAPRERIRRRNKGESSSAGRPWRAPPPP 188 H PP APR R R +G GR W A P P Sbjct: 49 HAAPPRAPRARHRGVRRG-GRGCGRAWPAAPLP 80
>AK107108:Os10g0100200 | Length = 88 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 8/42 (19%) Frame = +2 Query: 38 PPSRLHVSRPLSRVRL--PSPAPTHRS------KGKNTEKEQ 139 PPS L PL RVR PSP+P RS +G+ E+E+ Sbjct: 32 PPSPLPPPMPLPRVRTVPPSPSPKRRSVIPAGERGRRGEEEE 73
>AK101668:Os09g0416600 | Length = 354 Score = 23.1 bits (48), Expect(3) = 8.4 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%) Frame = +3 Query: 99 PPTA---PRERIRRRNKGESSSAGRPWRAPPP 185 PP A PR RRR +G +S RP R P Sbjct: 193 PPLALPQPRHGPRRRLRGHPASPARPRRLHLP 224 Score = 21.2 bits (43), Expect(3) = 8.4 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = +2 Query: 47 RLHVSRPLSRVRLPSPAP 100 R HV R R P PAP Sbjct: 151 RRHVGHRRRRARAPHPAP 168 Score = 20.4 bits (41), Expect(3) = 8.4 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +2 Query: 224 GKRGREVDLEGPEAEAAKRMRPE 292 G+ REV G E E +R PE Sbjct: 259 GRLPREVGARGLEREQQQRGEPE 281
>Os05g0334800:Os05g0334800 | Length = 1619 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = +3 Query: 87 LHLHPPTAPRERIRRRNKGESSSAGRPWRAPPPP 188 L L P APR R ++G SSSA APPPP Sbjct: 1323 LQLSSPRAPRVRQPTFDQGASSSA-----APPPP 1351 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,469,740 Number of extensions: 365483 Number of successful extensions: 1912 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1885 Number of HSP's successfully gapped: 12 Length of query: 301 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 201 Effective length of database: 11,395,755 Effective search space: 2290546755 Effective search space used: 2290546755 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)