ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf36p12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK101998:Os01g0131300 77 2e-14
2AK120342:Os08g0233300 32 0.61
3AK067421:Os08g0233300 32 0.61
4AK107990:Os07g0613600 31 1.0
5AK108433:Os11g0449800 31 1.4
6AK108427:Os10g0181100 29 4.0
7AK109924:Os11g0538400 29 5.1
8AK107108:Os10g0100200 28 6.7
9AK101668:Os09g0416600 23 8.4
10Os05g0334800:Os05g0334800 28 8.8

>AK101998:Os01g0131300 |
          Length = 175
 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 68/179 (37%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
 Frame = +2

Query: 221 SGKRGREVDLEGPEAEAAKRMRPEXXXXXXXXXXXXXXXXXXX-SVMRSLEKEICAGDLA 397
           + KR R+ +    EA+ AKR+R E                    SVMRS E+EI AGD+A
Sbjct: 9   NNKRARDAE---DEADEAKRLRAEDLLDMLDDDTDAGGAAGDLASVMRSFEEEIVAGDVA 65

Query: 398 -----PPQPELGFLLEASDDEXXXXXXXXXXXXXXXXXXWEPEEPAAVFGDQIWGFEDEI 562
                  QPELGFLLEASDDE                   EPE+ A  FG QIWGFEDEI
Sbjct: 66  GDVAPTTQPELGFLLEASDDELGLPPATASSSEEEAGAG-EPED-AIGFGGQIWGFEDEI 123

Query: 563 DGAYAFGSIASSPEXXXXXXXXXXEWXXXXXXXXXXXXXXESFGPSDLAVLRQETMPAV 739
            G    G   +SPE          EW                FG  +++ LR ETMPAV
Sbjct: 124 GGGGYAGFALTSPE-AVAAAAAAAEWDDDGFDAGLF-----GFG-DEVSALRHETMPAV 175



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>AK120342:Os08g0233300 |
          Length = 184

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +3

Query: 102 PTAPRERIRRRNKGESSSAGRPWRAPPPP 188
           PTAPR   RRR +G +SS  R  R PPPP
Sbjct: 23  PTAPRSAGRRRRRG-ASSLCRCLRRPPPP 50



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>AK067421:Os08g0233300 |
          Length = 184

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +3

Query: 102 PTAPRERIRRRNKGESSSAGRPWRAPPPP 188
           PTAPR   RRR +G +SS  R  R PPPP
Sbjct: 23  PTAPRSAGRRRRRG-ASSLCRCLRRPPPP 50



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>AK107990:Os07g0613600 |
          Length = 85

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 19/50 (38%), Positives = 21/50 (42%)
 Frame = +3

Query: 39  LPPVCTFRALFHESGYLHLHPPTAPRERIRRRNKGESSSAGRPWRAPPPP 188
           LPP  T R          L PP+ P +R RRR   E     R    PPPP
Sbjct: 32  LPPGSTGRTPCRPCRRALLPPPSPPAQRRRRRPSPEQPHGRRLRHHPPPP 81



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>AK108433:Os11g0449800 |
          Length = 153

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 12  HRFLHHSFPLPPVCTFRALFHESGYLHLHPPTAPRERIRRRNKGES--SSAGRPWRAPPP 185
           HR+  H+ P P +   R+   +   ++   P  PR        G S  S+AGRP  +PP 
Sbjct: 78  HRWKLHAAPPPSMEAERSAAVDGSRVYRRMPNMPRRAAAAAAAGRSTASTAGRPMPSPPH 137

Query: 186 PH 191
            H
Sbjct: 138 YH 139



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>AK108427:Os10g0181100 |
          Length = 248

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/32 (53%), Positives = 18/32 (56%)
 Frame = +2

Query: 5   RHAPLFAPLFSPPSRLHVSRPLSRVRLPSPAP 100
           RH PL+  LFSP       R LSR R PSP P
Sbjct: 207 RHLPLYIFLFSP-------RRLSRRRSPSPPP 231



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>AK109924:Os11g0538400 |
          Length = 610

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 90  HLHPPTAPRERIRRRNKGESSSAGRPWRAPPPP 188
           H  PP APR R R   +G     GR W A P P
Sbjct: 49  HAAPPRAPRARHRGVRRG-GRGCGRAWPAAPLP 80



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>AK107108:Os10g0100200 |
          Length = 88

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
 Frame = +2

Query: 38  PPSRLHVSRPLSRVRL--PSPAPTHRS------KGKNTEKEQ 139
           PPS L    PL RVR   PSP+P  RS      +G+  E+E+
Sbjct: 32  PPSPLPPPMPLPRVRTVPPSPSPKRRSVIPAGERGRRGEEEE 73



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>AK101668:Os09g0416600 |
          Length = 354

 Score = 23.1 bits (48), Expect(3) = 8.4
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +3

Query: 99  PPTA---PRERIRRRNKGESSSAGRPWRAPPP 185
           PP A   PR   RRR +G  +S  RP R   P
Sbjct: 193 PPLALPQPRHGPRRRLRGHPASPARPRRLHLP 224



 Score = 21.2 bits (43), Expect(3) = 8.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 47  RLHVSRPLSRVRLPSPAP 100
           R HV     R R P PAP
Sbjct: 151 RRHVGHRRRRARAPHPAP 168



 Score = 20.4 bits (41), Expect(3) = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 224 GKRGREVDLEGPEAEAAKRMRPE 292
           G+  REV   G E E  +R  PE
Sbjct: 259 GRLPREVGARGLEREQQQRGEPE 281



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>Os05g0334800:Os05g0334800 |
          Length = 1619

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = +3

Query: 87   LHLHPPTAPRERIRRRNKGESSSAGRPWRAPPPP 188
            L L  P APR R    ++G SSSA     APPPP
Sbjct: 1323 LQLSSPRAPRVRQPTFDQGASSSA-----APPPP 1351


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,469,740
Number of extensions: 365483
Number of successful extensions: 1912
Number of sequences better than 10.0: 10
Number of HSP's gapped: 1885
Number of HSP's successfully gapped: 12
Length of query: 301
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 201
Effective length of database: 11,395,755
Effective search space: 2290546755
Effective search space used: 2290546755
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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