>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
          Length = 791
 Score =  134 bits (338), Expect = 1e-30
 Identities = 100/402 (24%), Positives = 185/402 (46%)
 Frame = +3

Query: 396  RENDLDEAALLTRHSIYSNCRPTVFTCNTVLAALLRQARYADLLSLHRFVTQASVAPTVA 575
            +E D D+A       +     P V T N+++AAL +       + +   + +  V P   
Sbjct: 208  KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 576  THNLLLQAYCDCRRPETALEHFRXXXXXXXXXXXXXTTYRILARSLAENGKLDLALELKD 755
            T+N +L  YC   +P+ A+   +              TY +L   L +NG+   A ++ D
Sbjct: 268  TYNSILHGYCSSGQPKEAIGFLK--KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325

Query: 756  GMLERGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYXXXXXXXXXXXILDGVVYGNLMKGY 935
             M +RGL  P+   Y  ++ G+   G     V ++             D  V+  L+  Y
Sbjct: 326  SMTKRGL-KPEITTYGTLLQGYATKG---ALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 936  FLKGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPP 1115
              +G   +AM  ++++  +G  +   AV+Y  V+  L ++GR++DA+  F++M  E   P
Sbjct: 382  AKQGKVDQAMLVFSKMRQQG--LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 1116 RRIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGE 1295
              I      +N ++   C   +++ A E+  +M ++    + + +NS+I+   K   V E
Sbjct: 440  GNIV-----YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 1296 AEELYKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVIS 1475
            +E+L++ M   G+ P+  TY  LI        +D+A+   S M  VGL+PN   ++ +I+
Sbjct: 495  SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 1476 GLVKVDRIDEAQGFFDLMTEKEVKPNIASCESLLRAYINVAR 1601
            G  K+ R+++A   F  M    V P+I +   +L+      R
Sbjct: 555  GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596



 Score =  127 bits (318), Expect = 3e-28
 Identities = 109/443 (24%), Positives = 190/443 (42%), Gaps = 32/443 (7%)
 Frame = +3

Query: 405  DLDEAALLTRHSIYSNCRPTVFTCNTVLAALLRQARYADLLSLH-RFVTQASVAPTVATH 581
            DL  AAL   + I    R        +L  L    R +D + +  R +T+    P V ++
Sbjct: 104  DLGFAAL--GNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161

Query: 582  NLLLQAYCDCRRPETALEHFRXXXXXXXXXXXXXT-TYRILARSLAENGKLDLALELKDG 758
            N+LL+  CD  R + ALE                  +Y  +     + G  D A      
Sbjct: 162  NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 759  MLERGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYXXXXXXXXXXXILDGVVYGNLMKGYF 938
            ML+RG++ PD   Y  ++     A   D A+ +              D + Y +++ GY 
Sbjct: 222  MLDRGIL-PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP---DCMTYNSILHGYC 277

Query: 939  LKGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPR 1118
              G  KEA+    ++  +G  V    V+Y++++D L +NGR  +A ++FD M K    P 
Sbjct: 278  SSGQPKEAIGFLKKMRSDG--VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335

Query: 1119 ------------------------RIAVNLGS------FNVMVDAYCGVERFQDAIEVFG 1208
                                     + V  G       F++++ AY    +   A+ VF 
Sbjct: 336  ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFS 395

Query: 1209 KMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGERGINPDEYTYVLLIESCFRVD 1388
            KM ++   P+A++Y ++I  L K+  V +A   +++M + G++P    Y  LI      +
Sbjct: 396  KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455

Query: 1389 NVDDAVGYFSKMFDVGLRPNANAFNKVISGLVKVDRIDEAQGFFDLMTEKEVKPNIASCE 1568
              + A     +M D G+  N   FN +I    K  R+ E++  F+LM    VKPN+ +  
Sbjct: 456  KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515

Query: 1569 SLLRAYINVARLDDAIKMAKGIL 1637
            +L+  Y    ++D+A+K+  G++
Sbjct: 516  TLINGYCLAGKMDEAMKLLSGMV 538



 Score =  106 bits (265), Expect = 4e-22
 Identities = 83/385 (21%), Positives = 172/385 (44%)
 Frame = +3

Query: 459  PTVFTCNTVLAALLRQARYADLLSLHRFVTQASVAPTVATHNLLLQAYCDCRRPETALEH 638
            P V T + ++  L +  R  +   +   +T+  + P + T+  LLQ Y    +      H
Sbjct: 299  PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT--KGALVEMH 356

Query: 639  FRXXXXXXXXXXXXXTTYRILARSLAENGKLDLALELKDGMLERGLIAPDPQVYAFVMGG 818
                             + IL  + A+ GK+D A+ +   M ++GL  P+   Y  V+G 
Sbjct: 357  GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPNAVTYGAVIGI 415

Query: 819  FVNAGDGDTAVSLYXXXXXXXXXXXILDGVVYGNLMKGYFLKGMEKEAMDCYTEVLGEGS 998
               +G  + A+  +               +VY +L+ G       + A +   E+L  G 
Sbjct: 416  LCKSGRVEDAMLYFEQMIDEGLSPG---NIVYNSLIHGLCTCNKWERAEELILEMLDRG- 471

Query: 999  KVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFNVMVDAYCGVE 1178
             +    + +N ++D+  + GR+ ++ +LF+ M +    P     N+ ++N +++ YC   
Sbjct: 472  -ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP-----NVITYNTLINGYCLAG 525

Query: 1179 RFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGERGINPDEYTYV 1358
            +  +A+++   M      P+ ++Y++LIN   K   + +A  L+KEM   G++PD  TY 
Sbjct: 526  KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 1359 LLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVISGLVKVDRIDEAQGFFDLMTEK 1538
            ++++  F+      A   + ++ + G +   + +N ++ GL K    D+A   F  +   
Sbjct: 586  IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 1539 EVKPNIASCESLLRAYINVARLDDA 1613
            ++K    +   ++ A + V R D+A
Sbjct: 646  DLKLEARTFNIMIDALLKVGRNDEA 670



 Score = 85.9 bits (211), Expect = 7e-16
 Identities = 80/386 (20%), Positives = 160/386 (41%)
 Frame = +3

Query: 381  ILTLVRENDLDEAALLTRHSIYSNCRPTVFTCNTVLAALLRQARYADLLSLHRFVTQASV 560
            I    ++  +D+A L+          P   T   V+  L +  R  D +     +    +
Sbjct: 378  ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 561  APTVATHNLLLQAYCDCRRPETALEHFRXXXXXXXXXXXXXTTYRILARSLAENGKLDLA 740
            +P    +N L+   C C + E A E                  +  +  S  + G++  +
Sbjct: 438  SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIES 495

Query: 741  LELKDGMLERGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYXXXXXXXXXXXILDGVVYGN 920
             +L + M+  G + P+   Y  ++ G+  AG  D A+ L              + V Y  
Sbjct: 496  EKLFELMVRIG-VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP---NTVTYST 551

Query: 921  LMKGYFLKGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCK 1100
            L+ GY      ++A+  + E+  E S V    ++YN++L  L +  R   A EL+ R+ +
Sbjct: 552  LINGYCKISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 1101 EHDPPRRIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKN 1280
                     + L ++N+++   C  +   DA+++F  +       +A ++N +I+ L K 
Sbjct: 610  SGTQ-----IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 664

Query: 1281 KLVGEAEELYKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAF 1460
                EA++L+      G+ P+ +TY L+ E+      +++    F  M D G   ++   
Sbjct: 665  GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGML 724

Query: 1461 NKVISGLVKVDRIDEAQGFFDLMTEK 1538
            N ++  L++   I  A  +  ++ EK
Sbjct: 725  NFIVRELLQRGEITRAGTYLSMIDEK 750



 Score = 42.7 bits (99), Expect = 0.007
 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
 Frame = +3

Query: 1308 YKEMGERG---INPDEYTYVLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVISG 1478
            Y  M   G   + PD  TY +LI  C R   +D        +   G R +A AF  ++ G
Sbjct: 72   YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 1479 LVKVDRIDEAQGF-FDLMTEKEVKPNIASCESLLRAYINVARLDDAIKM 1622
            L    R  +A       MTE    PN+ S   LL+   +  R  +A+++
Sbjct: 132  LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180

>P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 463

 Score = 85.9 bits (211), Expect = 7e-16
 Identities = 83/378 (21%), Positives = 147/378 (38%)
 Frame = +3

Query: 408  LDEAALLTRHSIYSNCRPTVFTCNTVLAALLRQARYADLLSLHRFVTQASVAPTVATHNL 587
            ++EA  +TR    +  RP V T N+++A   R+     +L L   + +  + P + ++N 
Sbjct: 64   IEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNT 123

Query: 588  LLQAYCDCRRPETALEHFRXXXXXXXXXXXXXTTYRILARSLAENGKLDLALELKDGMLE 767
            L+  Y    + E A                   TY +L  +L + G +D ALEL   M  
Sbjct: 124  LMCCYFKLGKHEEAFRVL-YKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQS 182

Query: 768  RGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYXXXXXXXXXXXILDGVVYGNLMKGYFLKG 947
            R    P+   Y  ++ G   +    TA  +              + V Y  ++K YF   
Sbjct: 183  R--FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTP---NAVTYTTILKLYFKTR 237

Query: 948  MEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIA 1127
              +  +  + E+  EG    +   +Y  V+ AL + GR                      
Sbjct: 238  RIRRGLQLFLEMKREG--YTYDGYAYFAVVSALIKTGRT--------------------- 274

Query: 1128 VNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEEL 1307
                               ++A E   ++  K    D +SYN+L+N   K+  +   ++L
Sbjct: 275  -------------------KEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDL 315

Query: 1308 YKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVISGLVK 1487
              E+  RG+  DEYT+ +++    R      A  +F  M ++G+  N    N ++ GL K
Sbjct: 316  LGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCK 375

Query: 1488 VDRIDEAQGFFDLMTEKE 1541
               +D A  +F+ M  K+
Sbjct: 376  AGHVDRAMRYFESMEVKD 393



 Score = 82.4 bits (202), Expect = 7e-15
 Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
 Frame = +3

Query: 900  DGVVYGNLMKGYFLKGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVE 1079
            D V Y  L+ GY      +EA      +   G  +R    +YN ++    R   LD  + 
Sbjct: 47   DVVTYNTLISGYCRFVGIEEAYAVTRRMRDAG--IRPDVATYNSLIAGAARRLMLDHVLY 104

Query: 1080 LFDRMCK---------------------EHDPPRRI--------AVNLG--SFNVMVDAY 1166
            LFD M +                     +H+   R+         +N G  ++NV++DA 
Sbjct: 105  LFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDAL 164

Query: 1167 CGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGERGINPDE 1346
            C      +A+E+F +M +    P+ ++YN LIN L K++ VG A+ +  E+ + G  P+ 
Sbjct: 165  CKCGYIDNALELFKEM-QSRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNA 223

Query: 1347 YTYVLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVISGLVKVDRIDEAQGFFDL 1526
             TY  +++  F+   +   +  F +M   G   +  A+  V+S L+K  R  EA  +   
Sbjct: 224  VTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQE 283

Query: 1527 MTEKEVKPNIASCESLLRAYINVARLD 1607
            +  K  + +I S  +LL  Y     LD
Sbjct: 284  LVRKGRRHDIVSYNTLLNLYFKDGNLD 310



 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 33/124 (26%), Positives = 63/124 (50%)
 Frame = +3

Query: 1251 NSLINWLGKNKLVGEAEELYKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKMFD 1430
            N  ++ L K + + +AE L  +    G++PD  TY  LI    R   +++A     +M D
Sbjct: 17   NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76

Query: 1431 VGLRPNANAFNKVISGLVKVDRIDEAQGFFDLMTEKEVKPNIASCESLLRAYINVARLDD 1610
             G+RP+   +N +I+G  +   +D     FD M E  + P++ S  +L+  Y  + + ++
Sbjct: 77   AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136

Query: 1611 AIKM 1622
            A ++
Sbjct: 137  AFRV 140

>Q8C2E4:PTCD1_MOUSE Pentatricopeptide repeat protein 1 - Mus musculus (Mouse)|
          Length = 695

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 37/179 (20%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
 Frame = +3

Query: 942  KGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRR 1121
            +G   EA+D +   + +  +++    +Y +++   GR G L  A  LF+ M K+ D    
Sbjct: 147  EGKLAEALDLFERQMLKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDM-KKRDLEPS 205

Query: 1122 IAVNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAE 1301
             A     FNV  ++       Q A+++  ++  ++   +  +Y++L+    K   +    
Sbjct: 206  DATYTALFNVCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLKVAAKCADLRLCL 265

Query: 1302 ELYKEMGERGINPDEYTYVLLIESCF--RVDNVDDAVGYFSKMFDVGLRPNANAFNKVI 1472
            +++KE+ +RG    E T+  L+  C   +      A+  + +M  +G++P+ + +N ++
Sbjct: 266  DVFKEIIQRGHAVTEETFCFLLVGCIQDKKTGFRQAMQVWRQMLSLGIKPSRHGYNLLL 324

>Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 1261

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 30/134 (22%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = +3

Query: 1191 AIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGERGINPDEYTYVLLIE 1370
            A+ +F +    +  P    YN++++ LG+ +   E  +L++EM E G+ P   TY  +I 
Sbjct: 910  ALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVIN 969

Query: 1371 SCFRVDNVDDAVGYFSKMFD-VGLRPNANAFNKVISGLVK-VDRIDEAQGFFDLMTEKEV 1544
            +  R+ +   A   F++M +    +P    +N +I   V+ +   ++A  +++ +   ++
Sbjct: 970  AACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDI 1029

Query: 1545 KPNIASCESLLRAY 1586
            +P+  + + L+ AY
Sbjct: 1030 EPSSHTYKLLMDAY 1043



 Score = 36.2 bits (82), Expect = 0.61
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
 Frame = +3

Query: 1023 YNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFNVMVDAYCGVERFQDAIEV 1202
            YN VL  LGR  R  +  +LF  M +    P  +     ++  +++A C +     A ++
Sbjct: 929  YNAVLSKLGRARRTTECWKLFQEMKESGLLPTSV-----TYGTVINAACRIGDESLAEKL 983

Query: 1203 FGKM-GEKSCTPDALSYNSLINWLGKNKLVGE-AEELYKEMGERGINPDEYTYVLLIES 1373
            F +M  + +  P    YN++I +  +     E A   Y  +    I P  +TY LL+++
Sbjct: 984  FAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDA 1042

>Q837V0:Y728_ENTFA Uncharacterized RNA methyltransferase EF_0728 - Enterococcus faecalis|
            (Streptococcus faecalis)
          Length = 457

 Score = 37.4 bits (85), Expect = 0.27
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = +3

Query: 1149 VMVDAYCGVERF-----QDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYK 1313
            ++VDAYCG+        QDA +V+G    +    DA +   L N        G AEEL  
Sbjct: 311  IVVDAYCGIGTIGLTLAQDAKQVYGIEVIEEAVKDAENNAKLNNIENATFTAGLAEELLP 370

Query: 1314 EMGERGINPD 1343
            ++ E G+ PD
Sbjct: 371  KLVENGLQPD 380

>Q8ES75:Y768_OCEIH Uncharacterized RNA methyltransferase OB0768 - Oceanobacillus|
            iheyensis
          Length = 459

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
 Frame = +3

Query: 1131 NLGSFNVMVDAYCGVERF-----QDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKL-VG 1292
            N+   +V++DAYCG+        Q A +V+G         DA   N+ IN +   +  VG
Sbjct: 306  NIDKDDVVIDAYCGIGSISLFLAQKAKKVYGIEVVPEAIEDA-KMNAEINGMNNVEFSVG 364

Query: 1293 EAEELYKEMGERGINPD 1343
            +AE++  +  E+G++PD
Sbjct: 365  QAEKVMPKWKEQGLDPD 381

>P25425:PO2F1_MOUSE POU domain, class 2, transcription factor 1 - Mus musculus (Mouse)|
          Length = 770

 Score = 34.7 bits (78), Expect = 1.8
 Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
 Frame = -1

Query: 1324 SPISLYNSSASPTSLFFPSQLI------RLLYESASGVQLFSPILPNTSIASWNLSTPQ- 1166
            +P S   +S+SP    FPS          L+  S +     +P+LP TS A  NLS    
Sbjct: 441  NPPSSGGTSSSPIKAIFPSPASLVATTPSLVTSSTATTLTVNPVLPLTSAAVTNLSLTDQ 500

Query: 1165 -----*ASTITLKLPRFTAILLGGSCSLHILSNNSTASSNLPFLPSASSTML*LTAPNLT 1001
                  +  +   LP       G + S    SNN+TA+  +   P ASS    +T+P+L+
Sbjct: 501  DLRRGCSWEVLRSLPDRVTTTAGTTDS---TSNNNTATV-ISTAPPASSA---VTSPSLS 553

Query: 1000 LDPSPSTSV*QSMAS 956
              PSPS S   S AS
Sbjct: 554  --PSPSASASTSEAS 566

>Q20255:TTC21_CAEEL Tetratricopeptide repeat protein 21 homolog - Caenorhabditis elegans|
          Length = 1332

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
 Frame = +3

Query: 969  CYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFN 1148
            CY E+L    KV     SY+++ DA  +    +DA+  +++  K      ++A  +G   
Sbjct: 726  CYRELL----KVEATPGSYSLLGDAFMKVQEPEDAINFYEQALKMQSKDVQLAEKIGEAY 781

Query: 1149 VMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGER 1328
            VM   Y     F ++          +   D      L N L K +   + E++ +   ER
Sbjct: 782  VMAHLYSKAVNFYES--------SMNIYKDKNMRLKLANLLLKLRNFEKCEKVLRAPFER 833

Query: 1329 GINP-------DEYTYVLLIESCFR-VDNVDDAVGYFSK 1421
               P           ++LL+  C   +DNV +A+  F K
Sbjct: 834  DPEPVGTETIQTYIQFLLLLAECHEMMDNVPEAMNDFEK 872

>P14859:PO2F1_HUMAN POU domain, class 2, transcription factor 1 - Homo sapiens (Human)|
          Length = 743

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
 Frame = -1

Query: 1324 SPISLYNSSASPTSLFFPSQLI------RLLYESASGVQLFSPILPNTSIASWNLSTPQ* 1163
            +P S   +S+SP    FPS          L+  SA+     SP+LP TS A  NLS    
Sbjct: 438  NPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGT 497

Query: 1162 ASTITLKLPRFTAILLGGSCSLHILSNNSTASSNLPFLPSASSTML*LTAPNLTLDPSPS 983
            + T +                    +N +T  S  P  P++S+    +T+P+L+  PSPS
Sbjct: 498  SDTTS--------------------NNTATVISTAP--PASSA----VTSPSLS--PSPS 529

Query: 982  TSV*QSMAS 956
             S   S AS
Sbjct: 530  ASASTSEAS 538

>Q2SR40:PHNC_MYCCT Phosphonates import ATP-binding protein phnC - Mycoplasma capricolum|
            subsp. capricolum (strain California kid / ATCC 27343 /
            NCTC 10154)
          Length = 250

 Score = 33.9 bits (76), Expect = 3.0
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
 Frame = -3

Query: 1679 KCLQFISKHDTLIQKNTLSHLNCI----IQPCNIDVCSQQRFAASNIWLDLLFGHQIKEP 1512
            K + F  + D LI  N+L+ LN +    I+  N+    QQR A +       F     EP
Sbjct: 119  KIIGFFKREDKLIALNSLNKLNLLDYAYIRADNLSGGQQQRVALARTLAQQPFLIIADEP 178

Query: 1511 LCLINPINLHQATYDFV---KGIGIGPETNIKHLAEVTNSVIHIINPEAGLNE*DI 1353
            +  ++PI  +Q   DF    K  GI    NI H+         +I    GLN  +I
Sbjct: 179  VSALDPILANQVMKDFKNINKKDGITVIINIHHVDLAKKYATRVI----GLNNGEI 230

>Q6MUF4:PHNC_MYCMS Phosphonates import ATP-binding protein phnC - Mycoplasma mycoides|
            subsp. mycoides SC
          Length = 250

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
 Frame = -3

Query: 1679 KCLQFISKHDTLIQKNTLSHLNCI----IQPCNIDVCSQQRFAASNIWLDLLFGHQIKEP 1512
            K L F  + D +I  N+L  LN +    I+  N+    QQR A +       F     EP
Sbjct: 119  KILGFFKREDKMIALNSLDKLNLLDYAYIRADNLSGGQQQRVALARTLAQQPFLIIADEP 178

Query: 1511 LCLINPINLHQATYDFV---KGIGIGPETNIKHLAEVTNSVIHIINPEAGLNE*DI 1353
            +  ++PI  +Q   DF    K  GI    NI H+         +I    GLN  +I
Sbjct: 179  VSALDPILANQVMKDFKNINKKDGITVIINIHHVDLAKKYATRVI----GLNNGEI 230

>Q63V83:GLMM_BURPS Phosphoglucosamine mutase - Burkholderia pseudomallei (Pseudomonas|
            pseudomallei)
          Length = 452

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
 Frame = +3

Query: 1038 DALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMG 1217
            D LG+  RLDDA   +   CK   P    A +L    ++VD   G   +Q A  VF ++G
Sbjct: 149  DGLGKARRLDDAAGRYIEFCKSTFP---AAFDLRGMKLVVDCAHGA-AYQVAPHVFHELG 204

Query: 1218 EK----SCTPDALSYNSLINWLGKNKLVGEAEELYKEMG----------------ERGIN 1337
                     P+  + N  +     + L+      + ++G                 R  N
Sbjct: 205  ADVIPIGVAPNGFNINDGVGATAPDALMRAVRANHADLGIALDGDADRLLVVDHTGRLYN 264

Query: 1338 PDEYTYVLLIESCFRVDNVDDAVGYFSKMFDV 1433
             DE  YVL+ +       V+ AVG     F V
Sbjct: 265  GDELLYVLVKDRIATNGQVEGAVGTLMTNFAV 296

>Q62L77:GLMM_BURMA Phosphoglucosamine mutase - Burkholderia mallei (Pseudomonas mallei)|
          Length = 452

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
 Frame = +3

Query: 1038 DALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMG 1217
            D LG+  RLDDA   +   CK   P    A +L    ++VD   G   +Q A  VF ++G
Sbjct: 149  DGLGKARRLDDAAGRYIEFCKSTFP---AAFDLRGMKLVVDCAHGA-AYQVAPHVFHELG 204

Query: 1218 EK----SCTPDALSYNSLINWLGKNKLVGEAEELYKEMG----------------ERGIN 1337
                     P+  + N  +     + L+      + ++G                 R  N
Sbjct: 205  ADVIPIGVAPNGFNINDGVGATAPDALMRAVRANHADLGIALDGDADRLLVVDHTGRLYN 264

Query: 1338 PDEYTYVLLIESCFRVDNVDDAVGYFSKMFDV 1433
             DE  YVL+ +       V+ AVG     F V
Sbjct: 265  GDELLYVLVKDRIATNGQVEGAVGTLMTNFAV 296

>P48237:YG3M_YEAST Uncharacterized protein YGR150C - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 864

 Score = 32.7 bits (73), Expect = 6.7
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +3

Query: 1122 IAVNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCT--PDALSYNSLINWLGKNKLVGE 1295
            I  N  +   ++  Y   E  + A   F  M   S    PD  +YN+++    K +   +
Sbjct: 316  ITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPK 375

Query: 1296 AEELYKEMGERGINPDEYTYVLL 1364
            A +L++E+ +  I P   TY+++
Sbjct: 376  ALDLFQEIQDHNIKPTTNTYIMM 398

>Q61LA1:TTC21_CAEBR Tetratricopeptide repeat protein 21 homolog - Caenorhabditis briggsae|
          Length = 1323

 Score = 32.3 bits (72), Expect = 8.8
 Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
 Frame = +3

Query: 969  CYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFN 1148
            CY E+L    KV     SY+++ DA  +    +DA+  +++  K      ++A  +G   
Sbjct: 724  CYRELL----KVEPTPGSYSLLGDAFMKVQEPEDAINFYEQALKMQSKDVQLAEKIGEAY 779

Query: 1149 VMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEAEELYKEMGER 1328
            VM   Y     F ++          +   D      L N L + K   + E++ +   +R
Sbjct: 780  VMAHLYSKAVNFYES--------SMNIYKDKNMRLKLANLLLRLKNYEKCEKILRAPLDR 831

Query: 1329 GINPDE-------YTYVLLIESCFR-VDNVDDAVGYFSK 1421
               P +         ++LL+  C   V+N+ +A+  F K
Sbjct: 832  EPEPSDTETIQTHIQFLLLLAECHEMVENIPEAMKDFEK 870

>O00411:RPOM_HUMAN DNA-directed RNA polymerase, mitochondrial precursor - Homo sapiens|
            (Human)
          Length = 1230

 Score = 32.3 bits (72), Expect = 8.8
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +3

Query: 1116 RRIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGK-NKLVG 1292
            +R  + L  +N ++  +     F++ + V   + +   TPD LSY + +  +G+ ++  G
Sbjct: 255  KRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAG 314

Query: 1293 EAEELYKEMGERGINPDE-YTYVLLIE 1370
              E   ++M + G+     +T VLL E
Sbjct: 315  TIERCLEQMSQEGLKLQALFTAVLLSE 341

>P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 1367

 Score = 32.3 bits (72), Expect = 8.8
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
 Frame = -1

Query: 1402 ASSTLSTLKQDSMSKT*VYSSGLIPRSPISLYNSSASP-TSLFFPSQLIRLLYESASGVQ 1226
            +SST  +      S T   SS  +P    S   SS++P TS    S    +   S+S  +
Sbjct: 531  SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTE 590

Query: 1225 LFSPILPNTSIASWNLS-----TPQ*ASTITLKLPRFTAILLGGSCSLHILSNNSTASSN 1061
              S  +P  S ++   S     TP  ++T +   P  ++     S  +   S+++T SS+
Sbjct: 591  SSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 650

Query: 1060 LPFLPSASSTML*LTAPNLTLDPSPSTSV*QSMAS 956
             P    +SST    +AP     P+PS+S  +S ++
Sbjct: 651  APVPTPSSSTTESSSAP----VPTPSSSTTESSSA 681


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 317,227,888
Number of extensions: 6395061
Number of successful extensions: 16860
Number of sequences better than 10.0: 17
Number of HSP's gapped: 16786
Number of HSP's successfully gapped: 27
Length of query: 760
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 639
Effective length of database: 67,496,744
Effective search space: 43130419416
Effective search space used: 43130419416
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)