ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf35b06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104136:Os10g0580900 | 445 | e-125 | 2 | AK072734:Os10g0580900 | 445 | e-125 | 3 | AK065419:Os07g0159500 | 313 | 3e-85 | 4 | AK062240:Os06g0115800 | 238 | 6e-63 | 5 | AK069560:Os06g0115800 | 236 | 2e-62 | 6 | Os02g0133500:Os02g0133500 | 34 | 0.22 | 7 | AK065810:Os11g0425300 | 33 | 0.65 | 8 | Os06g0175400:Os06g0175400 | 32 | 1.1 | 9 | AK100757:Os04g0555000 | 32 | 1.5 | 10 | Os06g0177000:Os06g0177000 | 30 | 3.2 | 11 | AK120341:Os06g0175900 | 30 | 3.2 | 12 | AK119716:Os06g0175900 | 30 | 3.2 | 13 | AK121989:Os06g0335500 | 29 | 7.2 | 14 | AK109998: | 29 | 9.5 |
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>AK104136:Os10g0580900 | Length = 352 Score = 445 bits (1145), Expect = e-125 Identities = 237/356 (66%), Positives = 258/356 (72%), Gaps = 4/356 (1%) Frame = +3 Query: 180 MDSFFQRAFGDPMCSEDSNVVQQGIERCPFLRNINEPTSFSLTSVNFPAPATGAKGPIFE 359 MD FF+RA DP+C ED N VQ GIERCPFLRNINEPTSFS +SVNFP PA G KGPIFE Sbjct: 1 MDPFFRRASSDPLCLED-NSVQHGIERCPFLRNINEPTSFSFSSVNFPVPARGDKGPIFE 59 Query: 360 DGPNFDTAFRVFHGRDGVVPLSEGAFAHIEKPLPKPTPEFNPLAAKAATIXXXXXXXXXX 539 DGPNFD AFRVFHG+DGVVPLS G+F EKP+PKP PEFNPLAAKAATI Sbjct: 60 DGPNFDMAFRVFHGQDGVVPLSHGSFERFEKPMPKPNPEFNPLAAKAATISLSAFGGFFS 119 Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXGQSNNNHEAVSNNWLENGQCPLAKSYRAIGGVVPL 719 GQ NNHEA+SN WLE GQCPLAKSYRA+ GVVPL Sbjct: 120 FGDFSNKRNKKNSNQKKPNNLPQNGGQP-NNHEALSNEWLEMGQCPLAKSYRALSGVVPL 178 Query: 720 VAKLLTPPAGMKLTCPPXXXXXXXXXXXXXXXKGLRPQPLPTKVVVIALLGMAANVPLGI 899 VAK++TPPAGMKL CPP KGLRPQPLPTK++V+ALLGMAANVPLGI Sbjct: 179 VAKMMTPPAGMKLRCPPAVVAARAALSRTAFAKGLRPQPLPTKILVMALLGMAANVPLGI 238 Query: 900 WREHTTKFSVQWFAAVHAAVPFIGMLRKSILMPKSAMALTIAASILGQTIGSRAERIRLK 1079 WREHT KFSVQWFAAVHAAVPFIGMLRKS+LMPK+AMALTIAASILGQTIGSRAERIRLK Sbjct: 239 WREHTEKFSVQWFAAVHAAVPFIGMLRKSVLMPKTAMALTIAASILGQTIGSRAERIRLK 298 Query: 1080 RAKLAAEGRGHEHATRLEAPVSLKTGS-SGPVQLWDPLGLRVK---GVVSPALVPT 1235 RA A G + +TR+ SLKTG + VQ WDPL LRV+ G +P LVPT Sbjct: 299 RAAKVAAGSQGDASTRM----SLKTGRYTDDVQFWDPLALRVESTIGTGTPVLVPT 350
>AK072734:Os10g0580900 | Length = 352 Score = 445 bits (1145), Expect = e-125 Identities = 237/356 (66%), Positives = 258/356 (72%), Gaps = 4/356 (1%) Frame = +3 Query: 180 MDSFFQRAFGDPMCSEDSNVVQQGIERCPFLRNINEPTSFSLTSVNFPAPATGAKGPIFE 359 MD FF+RA DP+C ED N VQ GIERCPFLRNINEPTSFS +SVNFP PA G KGPIFE Sbjct: 1 MDPFFRRASSDPLCLED-NSVQHGIERCPFLRNINEPTSFSFSSVNFPVPARGDKGPIFE 59 Query: 360 DGPNFDTAFRVFHGRDGVVPLSEGAFAHIEKPLPKPTPEFNPLAAKAATIXXXXXXXXXX 539 DGPNFD AFRVFHG+DGVVPLS G+F EKP+PKP PEFNPLAAKAATI Sbjct: 60 DGPNFDMAFRVFHGQDGVVPLSHGSFERFEKPMPKPNPEFNPLAAKAATISLSAFGGFFS 119 Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXGQSNNNHEAVSNNWLENGQCPLAKSYRAIGGVVPL 719 GQ NNHEA+SN WLE GQCPLAKSYRA+ GVVPL Sbjct: 120 FGDFSNKRNKKNSNQKKPNNLPQNGGQP-NNHEALSNEWLEMGQCPLAKSYRALSGVVPL 178 Query: 720 VAKLLTPPAGMKLTCPPXXXXXXXXXXXXXXXKGLRPQPLPTKVVVIALLGMAANVPLGI 899 VAK++TPPAGMKL CPP KGLRPQPLPTK++V+ALLGMAANVPLGI Sbjct: 179 VAKMMTPPAGMKLRCPPAVVAARAALSRTAFAKGLRPQPLPTKILVMALLGMAANVPLGI 238 Query: 900 WREHTTKFSVQWFAAVHAAVPFIGMLRKSILMPKSAMALTIAASILGQTIGSRAERIRLK 1079 WREHT KFSVQWFAAVHAAVPFIGMLRKS+LMPK+AMALTIAASILGQTIGSRAERIRLK Sbjct: 239 WREHTEKFSVQWFAAVHAAVPFIGMLRKSVLMPKTAMALTIAASILGQTIGSRAERIRLK 298 Query: 1080 RAKLAAEGRGHEHATRLEAPVSLKTGS-SGPVQLWDPLGLRVK---GVVSPALVPT 1235 RA A G + +TR+ SLKTG + VQ WDPL LRV+ G +P LVPT Sbjct: 299 RAAKVAAGSQGDASTRM----SLKTGRYTDDVQFWDPLALRVESTIGTGTPVLVPT 350
>AK065419:Os07g0159500 | Length = 370 Score = 313 bits (801), Expect = 3e-85 Identities = 177/374 (47%), Positives = 222/374 (59%), Gaps = 18/374 (4%) Frame = +3 Query: 180 MDSFFQRAFGDPMCSEDSNVVQQGIERCPFLRNINEPTSFSLTSVNFPAPATGAKGPIFE 359 M+ FF +F + S ++ +ERCPFLRNIN T++S +S P A G GPIFE Sbjct: 1 MEMFFS-SFLNESASSENLFGHPNVERCPFLRNINGATTYSFSSA-LPVAARGGNGPIFE 58 Query: 360 DGPNFDTAFRVFHGRDGVVPLSEGAFAHIEKPL------PKPTPEFNPLAAKAATIXXXX 521 DGP FD+AF++FHG DG+VPLS ++ E P+P FNPLAA+AATI Sbjct: 59 DGPGFDSAFKLFHGWDGIVPLSGKSYLPDESNSESIDANPEPALLFNPLAARAATISLSA 118 Query: 522 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------GQSNNNHEAVSNNWLENGQ 671 G ++++HEA+SN W+ENGQ Sbjct: 119 FGPFGFNFFNGKGKRQNKKPNNLNQSNKKPSNPNQNSMKQKGGNSSSHEAMSNEWMENGQ 178 Query: 672 CPLAKSYRAIGGVVPLVAKLLTPPAGMKLTCPPXXXXXXXXXXXXXXXKGLRPQPLPTKV 851 CPLA+SYRA+ G++PLVAK L PPAG+KL CPP K LRPQPLP K+ Sbjct: 179 CPLARSYRAMSGILPLVAKALQPPAGVKLKCPPAVVAIRAALARTELVKSLRPQPLPAKM 238 Query: 852 VVIALLGMAANVPLGIWREHTTKFSVQWFAAVHAAVPFIGMLRKSILMPKSAMALTIAAS 1031 V IALLGMAAN+PLG+WREHT KFS QWFAAVHAAVPFIGMLRKS+ MPK+AMA TIAAS Sbjct: 239 VAIALLGMAANIPLGVWREHTKKFSPQWFAAVHAAVPFIGMLRKSVNMPKTAMAFTIAAS 298 Query: 1032 ILGQTIGSRAERIRLKRAKLAAEGRGHEHATRLEAPVSLKTGSSGPVQ--LWDPLGLRVK 1205 I+GQTIGSRAERIRLK A +G +T + K+G+ + WDPL +++ Sbjct: 299 IIGQTIGSRAERIRLK----ALAAKGDADSTTVADMYPNKSGNCSDTEGKAWDPLAMKMA 354 Query: 1206 GVVSPALVPTVGAM 1247 G S + +M Sbjct: 355 GRASGGVAAPTPSM 368
>AK062240:Os06g0115800 | Length = 283 Score = 238 bits (608), Expect = 6e-63 Identities = 132/260 (50%), Positives = 158/260 (60%), Gaps = 12/260 (4%) Frame = +3 Query: 459 PKPTPEFNPLAAKAATIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------- 614 P+P FNPLAA+AATI Sbjct: 10 PEPALPFNPLAARAATISLSAFGPFGFNFFNGKGKRQNKKLNNLNQSNKKPSNPNQNSMK 69 Query: 615 --GQSNNNHEAVSNNWLENGQCPLAKSYRAIGGVVPLVAKLLTPPAGMKLTCPPXXXXXX 788 G ++++HEA+SN WLENGQCPLA+SYRA+ G++PLVAK L PPAG+KL CPP Sbjct: 70 QKGGNSSSHEAMSNEWLENGQCPLARSYRAMSGILPLVAKALQPPAGVKLKCPPAVVAVR 129 Query: 789 XXXXXXXXXKGLRPQPLPTKVVVIALLGMAANVPLGIWREHTTKFSVQWFAAVHAAVPFI 968 K LRPQPLP K+V IALLGMAAN+PLG+WREHT KFS QWFAAVHAAVPFI Sbjct: 130 AALARTELVKSLRPQPLPAKMVAIALLGMAANIPLGVWREHTKKFSPQWFAAVHAAVPFI 189 Query: 969 GMLRKSILMPKSAMALTIAASILGQTIGSRAERIRLKRAKLAAEGRGHEHATRLEAPVSL 1148 GMLRKS+ MPK+AMA TIAASI+GQTIGSRAERIRLK A + +T + Sbjct: 190 GMLRKSVNMPKTAMAFTIAASIVGQTIGSRAERIRLK----ALAAKSDADSTTVADMYPN 245 Query: 1149 KTGSSGPVQ--LWDPLGLRV 1202 KTG+ + WDPL +++ Sbjct: 246 KTGNCSDTEGKAWDPLAMKM 265
>AK069560:Os06g0115800 | Length = 232 Score = 236 bits (603), Expect = 2e-62 Identities = 120/198 (60%), Positives = 144/198 (72%), Gaps = 2/198 (1%) Frame = +3 Query: 615 GQSNNNHEAVSNNWLENGQCPLAKSYRAIGGVVPLVAKLLTPPAGMKLTCPPXXXXXXXX 794 G ++++HEA+SN WLENGQCPLA+SYRA+ G++PLVAK L PPAG+KL CPP Sbjct: 21 GGNSSSHEAMSNEWLENGQCPLARSYRAMSGILPLVAKALQPPAGVKLKCPPAVVAVRAA 80 Query: 795 XXXXXXXKGLRPQPLPTKVVVIALLGMAANVPLGIWREHTTKFSVQWFAAVHAAVPFIGM 974 K LRPQPLP K+V IALLGMAAN+PLG+WREHT KFS QWFAAVHAAVPFIGM Sbjct: 81 LARTELVKSLRPQPLPAKMVAIALLGMAANIPLGVWREHTKKFSPQWFAAVHAAVPFIGM 140 Query: 975 LRKSILMPKSAMALTIAASILGQTIGSRAERIRLKRAKLAAEGRGHEHATRLEAPVSLKT 1154 LRKS+ MPK+AMA TIAASI+GQTIGSRAERIRLK A + +T + KT Sbjct: 141 LRKSVNMPKTAMAFTIAASIVGQTIGSRAERIRLK----ALAAKSDADSTTVADMYPNKT 196 Query: 1155 GSSGPVQ--LWDPLGLRV 1202 G+ + WDPL +++ Sbjct: 197 GNCSDTEGKAWDPLAMKM 214
>Os02g0133500:Os02g0133500 | Length = 1033 Score = 34.3 bits (77), Expect = 0.22 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 1/97 (1%) Frame = +3 Query: 216 MCSEDSNVVQQGIERCPFLRNINEPTSFSLTSVNFPAPATGAKGPIFEDGPNFDTAFRVF 395 M S D + P ++ +P S + S P+ G +GP+ GP+ RV+ Sbjct: 379 MTSSDGGLPSSTPVVAPSHSDVEQPPSDAAASHGSPSSTPGGRGPVPPPGPSVVPFPRVY 438 Query: 396 HGRDGVVPLSEGAFAHIEKPLP-KPTPEFNPLAAKAA 503 R SE A A P P P P A AA Sbjct: 439 VRRSRTASTSEPATAPAAPVAPDAPAPPTTPTPAPAA 475
>AK065810:Os11g0425300 | Length = 363 Score = 32.7 bits (73), Expect = 0.65 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 367 GPSSKIGPLAPVAGAGKLTDVKEKLVGSLMFLRNGHRSIPCWTTLLSSEH 218 GP SK+ L ++G G +T +K + V MFL + + TT L+ +H Sbjct: 312 GPDSKLNHLTGISGRGSVTGLKPRPVRPGMFLETVSKVVYMQTTHLALQH 361
>Os06g0175400:Os06g0175400 | Length = 399 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/92 (27%), Positives = 38/92 (41%) Frame = -3 Query: 547 SPKLKKPPNPERLMVAALAAKGLNSGVGFGRGFSICAKAPSESGTTPSLPWKTRNAVSKL 368 SP+ PP+P ++A + A G F GF+ A P + ++ S A S Sbjct: 56 SPRPATPPSPS--ILAGILADLAEIGGSFTGGFARRAALPEPAFSSASASASATTAESPR 113 Query: 367 GPSSKIGPLAPVAGAGKLTDVKEKLVGSLMFL 272 SS +P A DV + +VG+ L Sbjct: 114 AASSTASSPSPSPAAAAAADVADDVVGAAQAL 145
>AK100757:Os04g0555000 | Length = 711 Score = 31.6 bits (70), Expect = 1.5 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 36/107 (33%) Frame = +3 Query: 936 FAAVHAAVPFIGMLRKSILMPKSAMALTIAASI------------------LGQTIGSRA 1061 F +H+AVPF L+ S+ P++AM T AA+ +G +IG+R Sbjct: 316 FPTLHSAVPF--QLQPSMQHPRNAMKSTAAAAAAQQQHLLDELAAAAKATEVGNSIGARE 373 Query: 1062 ERIRL------------------KRAKLAAEGRGHEHATRLEAPVSL 1148 RL K A L A GH ATRL +P+ + Sbjct: 374 ILARLNQQLPPIGKPFLRSASYLKDALLLALADGHHAATRLTSPLDV 420
>Os06g0177000:Os06g0177000 | Length = 72 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 834 PLPTKVVVIALLGMAANVPLGIWREHTTKF----SVQWFAAVHAAVPFIG 971 P+ K VV AL V G+W++ TTK S W +A P +G Sbjct: 5 PVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVSENWISATLLLAPIVG 54
>AK120341:Os06g0175900 | Length = 72 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 834 PLPTKVVVIALLGMAANVPLGIWREHTTKF----SVQWFAAVHAAVPFIG 971 P+ K VV AL V G+W++ TTK S W +A P +G Sbjct: 5 PVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVSENWISATLLLAPIVG 54
>AK119716:Os06g0175900 | Length = 72 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 834 PLPTKVVVIALLGMAANVPLGIWREHTTKF----SVQWFAAVHAAVPFIG 971 P+ K VV AL V G+W++ TTK S W +A P +G Sbjct: 5 PVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVSENWISATLLLAPIVG 54
>AK121989:Os06g0335500 | Length = 266 Score = 29.3 bits (64), Expect = 7.2 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 990 LMPKSAMALTIAASILGQTIGSRAERIRLKRAKLAAEGRGHEHATRLEAPVS 1145 L+PK A +I+G G R E K A AAE E + +AP + Sbjct: 54 LLPKGGAKRGFADAIVGGPAGQRREAAGGKAAAAAAEAEEEEEKKKAQAPAA 105
>AK109998: | Length = 774 Score = 28.9 bits (63), Expect = 9.5 Identities = 20/72 (27%), Positives = 30/72 (41%) Frame = +1 Query: 328 RQPEPRVQFSKTDPTLTRHFEFSTAETGLFRFQKEPLHILRSLCQSPLLNLTPWQPKQLP 507 R PR + P+LTRH + + + L Q+ P + +P L P P +L Sbjct: 7 RAAPPRAKLPPLSPSLTRHSDGFPSTSSLGHVQRSPPQL-----HAPPSKLPPPMPTRLH 61 Query: 508 SVSQDLEAFSAS 543 S + A AS Sbjct: 62 SYHHPISASYAS 73 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 41,830,546 Number of extensions: 982996 Number of successful extensions: 3028 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3017 Number of HSP's successfully gapped: 15 Length of query: 477 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 373 Effective length of database: 11,235,591 Effective search space: 4190875443 Effective search space used: 4190875443 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
